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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7362#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2007 fasta sequence
[CCGCGGACGCGTGGGCTCGGGTACGACTGGCATCCGGAGTGTTTGCGGTGCGAGGAGTGCGGCAAGCGCCTTAACCCGGGACAGCACGCCGAACACAAAGGTGTGCCGTACTGCCATGTGCCGTGCTACGGTGCCCTATTTGGGCCGCAGCTGTTCGGCCACGGTACCCGGGTGGAGTCGCACAAGAGCTTCGGCCAGCCGGATCAGAAAAAGCAGGCAGTGCAGCGCTCGCCAGCCGGCCCGGCCATACCCAAGGGGCACCTGGAGTCGAAGCTGAAGTCGTACAACCAGTTCCACAACAACAAGAGCATGGAGATACGGAGCCGCGAGGTGAACGGGCGGCTGGTGCTGGAGGGCGCCCTGCGCATCTACTGGGGGGTGCAGGGAATGATCCACCTGAAGGAGGACGACGACCAGCGCACCGTGGTGACGGTCCGGAAGCGTAACTCGTACCGCCAAAGCACGCCCGCCTCGCTGGCCCACGCTCACGCGACGAGCGATGGGGAGGAGGAGGGCAACGAAAAGGAAAACCACCCGAACCATGCGGACCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCGACGGGGAG-CCGGTGCGATGGGCGTCAGCACGTCCAGCCTGACCGAGCCGTGCGACAGCAACAACGACACGACCACCATCTCGGAGAGCATCTCGTACGACACGCTCAGCCTGTCGTCCGAGCTCAACTCGAACTTCGACTCGAAGCCGGTCTCGTCGAGCGAATCGTCCAAGGAGGTGTCGCCGAGCCACGCGGGCAAGTACGTGACGCTGCCGCCGAAGCTGGACGTGAAGCAGCTCGACTGGGACGAGATCGACGAGCTGCTGCAGGTGGAGCGCAAGCTGGACGAGAGCGAGAAGCTGTACCGGACGATGCCGTCCCCGCTGGCGACCGGCGGCGGTTCGGGCGGGTCCGGCGGCGACCGCAGCCTGGCGAGCGAGAGCGTCACCGATACGGATTACAAGACGCTCACGCCCAACACGGCCACCGGGTCGTCGG-GCGGGTCGGGCGCCGGCTCGGGCGACAGCGACCGGACGACGACCGGCGGGCCGGACACGTCCACGAGCGCGGCCACCACCAGCGCGGCGACCAACGGGGACGATGACTTTCGCACGCCGGAAGCGACGCTCCGGTCGCACGACTTCGAAGCGTTCAAGATGCAGATTAGCCGCGAGTTTATCAGCAGCACGGCGGAGATGGGCAACACGGACGGTACGCTGAAGCAGAACCAGCCGATCGATCCGGCCCGGATCAACGATTCGCTCAAGCTGTACAATGACGGCGTCATGAACCGGAGCCTGTCGGACGAGCAGTGCCGGG---AATGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATCGTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCAACGCTGCGCCATCCGGCCAACGGCAT-CTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCGGATGCACCTGCAGCGTGC-GGC-GCAACC-GGCCGG-ACCCGAC-GCACCGACCTCGTCGGAGGCTACCACGAACG-GTGCCGTTACGTC-GCCG-G-GCACGGAC-ACGGGACAGCTGGAC-GGCCGATCGGGGTCTGCTGCGCTCCAATGTCCCAGGGCAACCACTACTCGGGCAACAGCTTCATGGACAGCGATGTGGACGACGATAGCGGCTGTGGGGCGGTAGTGGCGGGACCGGCTCGGGTACGCTCAAACCCTCCGACAAGCCGCCGTCCTCGATCCACATCCGGATGGACTGTTACGACGAGCTGGAGAGCCCCTCGTCCGGTCAGTGCGATCACGCCGTCGCGAGGACGGTGAGCTGACCGCGTGACGGCGACACGCTAACGACGGCGACAGACGACGGCGACGAAGCAAGCGTCCGAGTACAGACCAGCATCAGCGGCACCGGTCACGGACGANGGGGTCGTGCTGGGAAGCCCGAAGAATGGCTCGACGGATCAGCGCCGTCGGCAC]
[+] EMBL BM577276 [CCGCGGACGCGTGGGCTCGGGTACGACTGGCATCCGGAGTGTTTGCGGTGCGAGGAGTGCGGCAAGCGCCTTAACCCGGGACAGCACGCCGAACACAAAGGTGTGCCGTACTGCCATGTGCCGTGCTACGGTGCCCTATTTGGGCCGCAGCTGTTCGGCCACGGTACCCGGGTGGAGTCGCACAAGAGCTTCGGCCAGCCGGATCAGAAAAAGCAGGCAGTGCAGCGCTCGCCAGCCGGCCCGGCCATACCCAAGGGGCACCTGGAGTCGAAGCTGAAGTCGTACAACCAGTTCCACAACAACAAGAGCATGGAGATACGGAGCCGCGAGGTGAACGGGCGGCTGGTGCTGGAGGGCGCCCTGCGCATCTACTGGGGGGTGCAGGGAATGATCCACCTGAAGGAGGACGACGACCAGCGCACCGTGGTGACGGTCCGGAAGCGTAACTCGTACCGCCAAAGCACGCCCGCCTCGCTGGCCCACGCTCACGCGACGAGCGATGGGGAGGAGGAGGGCAACGAAAAGGAAAACCACCCGAACCATGCGGACCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCGACGGGGAGCCCGGTGCGATGGGCGTCAGCACGTCCAGCCTGACCG ]
[+] EMBL BM599253 [ ccgGGAGATACGGAGCCGCGAGGTGAACGGGCGGCTGGTGCTGGAGGGCGCCCTGCGCATCTACTGGGGGGTGCAGGGAATGATCCACCTGAAGGAGGACGACGACCAGCGCACCGTGGTGACGGTCCGGAAGCGTAACTCGTACCGCCAAAGCACGCCCGCCTCGCTGGCCCACGCTCACGCGACGAGCGATGGGGAGGAGGAGGGCAACGAAAAGGAAAACCACCCGAACCATGCGGACCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCGACGGGGAG CCGGTGCGATGGGCGTCAGCACGTCCAGCCTGACCGAGCCGTGCGACAGCAACAACGACACGACCACCATCTCGGAGAGCATCTCGTACGACACGCTCAGCCTGTCGTCCGAGCTCAACTCGAACTTCGACTCGAAGCCGGTCTCGTCGAGCGAATCGTCCAAGGAGGTGTCGCCGAGCCACGCGGGCAAGTACGTGACGCTGCCGCCGAAGCTGGACGTGAAGCAGCTCGACTGGGACGAGATCGACGAGCTGCTGCAGGTGGAGCGCAAGCTGGACGAGAGC ]
[+] EMBL BM646629 [ ccgGGAGGTGTCGCCGAGCCACGCGGGCAAGTACGTGACGCTGCCGCCGAAGCTGGACGTGAAGCAGCTCGACTGGGACGAGATCGACGAGCTGCTGCAGGTGGAGCGCAAGCTGGACGAGAGCGAGAAGCTGTACCGGACGATGCCGTCCCCGCTGGCGACCGGCGGCGGTTCGGGCGGGTCCGGCGGCGACCGCAGCCTGGCGAGCGAGAGCGTCACCGATACGGATTACAAGACGCTCACGCCCAACACGGCCACCGGGTCGTCGGTGCGGGTCGGGCGCCGGCTCGGGCGACAGCGACCGGACGACGACCGGCGGGCCGGACACGTCCACGAGCGCGGCCACCACCAGCGCGGCGACCAACGGGGACGATGACTTTCGCACGCCGGAAGCGACGCTCCGGTCGCACGACTTCGAAGCGTTCAAGATGCAGATTAGCCGCGAGTTTATCAGCAGCACGGCGGAGATGGGCAACACGGACGGTACGCTGAAGCAGAACCAGCCGATCGATCCGGCCCGGATCAACGATTCGCTCAAGCTGTACAATGACGGCGTCATGAACCGGAGCCTGTCGGACGA ]
[+] EMBL BM625710 [ ccgGCAAGCTGGACGAGAGCGAGAAGCTGTACCGGACGATGCCGTCCCCGCTGGCGACCGGCGGCGGTTCGGGCGGGTCCGGCGGCGACCGCAGCCTGGCGAGCGAGAGCGTCACCGATACGGATTACAAGACGCTCACGCCCAACACGGCCACCGGGTCGTCGG GCGGGTCGGGCGCCGGCTCGGGCGACAGCGACCGGACGACGACCGGCGGGCCGGACACGTCCACGAGCGCGGCCACCACCAGCGCGGCGACCAACGGGGACGATGACTTTCGCACGCCGGAAGCGACGCTCCGGTCGCACGACTTCGAAGCGTTCAAGATGCAGATTAGCCGCGAGTTTATCAGCAGCACGGCGGAGATGGGCAACACGGACGGTACGCTGAAGCAGAACCAGCCGATCGATCCGGCCCGGATCAACGATTCGCTCAAGCTGTACAATGACGGCGTCATGAACCGGAGCCTGTCGGACGAGCAGTGCCGGG AATGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATCGTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCAACGCTGCGCCATCCGGCCAACGGCAT CTACGCGT ]
[+] EMBL BM606523 [ acccacGCGT CCG TACGGATTACAAGACGCTCACGCCCAACACGGCCACCGGGTCGTCGG GCGGGTCGGGCGCCGGCTCGGGCGACAGCGACCGGACGACGACCGGCGGGCCGGACACGTCCACGAGCGCGGCCACCACGAGCGCGGCGACCAACGGGGACGATGACTTTCGCACGCCGGAAGCGACGCTCCGGTCGCACGACTTCGAAGCGTTCAAGATGCAGATTAGCCGCGAGTTTATCAGCAGCACGGCGGAGATGGGCAACACGGACGGTACGCTGAAGCAGAACCAGCCGATCGATCCGGCCCGGATCAACGATTCGCTCAAGCTGTACAATGACGGCGTCATGAACCGGAGCCTGTCGGACGAGCAGTGCC GG AATGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATCGTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCAACGCTGCGCCATCCGGCCAACGGCAT CTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCGGATGCACCTGCAGCGTGC GGC GCAACC GGCCGG ACCCGAC GCACCGACCTCGTCGGAGGCTACCACGAACG GTGCCGTTACGTC GCCG G GCACGGAC ACGGGACAGCTGGAC GGCCGATCGGGG ]
[+] EMBL AL934732 [ atTGCCGAGTTAAATGCGATGTTTTCCCTGCCGG CGGC ANATCACGGGATCGTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCAACGCTGCGCCATCCGGCCAACGGCATACTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCGGATGCACCTGCAGCGTGCTGGCTGCAACCTGGCCGGTACCCGACTGCACCGACCTCGTCGGAGGCTACCACGAACGTGTGCCGTTACGTCTGCCGTGTGCACGGACTAC GGACAGCTGGACTTGCCGATCGGGGTCTGCTGCGCTCCAATGTCCCAGGGCAACCACTACTCGGGCAACAGCTTCATGGACAGCGATGTGGACGACGATAGCGGCTGTGGGGCGGTAGTGGCGGGACCGGCTCGGGTACGCTCAAACCCTCCGACAAGCCGCCGTCCTCGATCCACATCCGGATGGACTGTTACGACGAGCTGGAGAGCCCCTCGTCCGGTCAGTGCGATCACGCCGTCGCGAGGACGGTGAGCTGACCGCGTGACGGCGACACGCTAACGACGGCGACAGACGACGGCGACGAAGCAAGCGTCCGAGTACAGACCAGCATCAGCGGCACCGGTCACGGACGANGGGGTCGTGCTGGGAAGCCCGAAGAATGGCTCGACGGATCAGCGCCGTCGGCAC]
consensusID : consensus_7362#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence
[CCGCCCACGCGTCCGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATCGTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCTACGCTGCGCCATCCGGACAACGGCATCTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCGGATGCACCTGCAGCGTGCGGCGCAACCGGCCGGACCCGACGCACCGACCTCGTCGGAGGCTACCACTAACGGTGCCGTTACGTCGCCGGGCACGGACACGGACAGCTGGACGGTCGATCGGTGTCTGCTGCGCTCCAAGTCCCAGGGCAACCACTACTCGGTGAACAGCTTCATGGACAGCGATGTGGACGACGATAGCGGCGGGGGCGGTAGTGGCGGGACCGGCTCGGGTACGCTCAAACCCTCCGACAAGACGCCGTTCTCGATCCACATCCGGATGGACTGTTACGACGAGCTGGAGAGCCCCTCGTCCGGTCAGGCGATCACGCCGTCGGAGGACGGTGAGCTGACCGCCGTGACGGCGACCACGCTAACGACGACGACGACGACGACGGCGACGACGCAGCCGTCCG]
[+] EMBL BM631865 [CCGCCCACGCGTCCGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATCGTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCTACGCTGCGCCATCCGGACAACGGCATCTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCGGATGCACCTGCAGCGTGCGGCGCAACCGGCCGGACCCGACGCACCGACCTCGTCGGAGGCTACCACTAACGGTGCCGTTACGTCGCCGGGCACGGACACGGACAGCTGGACGGTCGATCGGTGTCTGCTGCGCTCCAAGTCCCAGGGCAACCACTACTCGGTGAACAGCTTCATGGACAGCGATGTGGACGACGATAGCGGCGGGGGCGGTAGTGGCGGGACCGGCTCGGGTACGCTCAAACCCTCCGACAAGACGCCGTTCTCGATCCACATCCGGATGGACTGTTACGACGAGCTGGAGAGCCCCTCGTCCGGTCAGGCGATCACGCCGTCGGAGGACGGTGAGCTGACCGCCGTGACGGCGACCACGCTAACGACGACGACGACGACGACGGCGACGACGCAGCCGTCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7362#0 CCGCGGACGCGTGGGCTCGGGTACGACTGGCATCCGGAGTGTTTGCGGTGCGAGGAGTGC 60
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 GGCAAGCGCCTTAACCCGGGACAGCACGCCGAACACAAAGGTGTGCCGTACTGCCATGTG 120
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CCGTGCTACGGTGCCCTATTTGGGCCGCAGCTGTTCGGCCACGGTACCCGGGTGGAGTCG 180
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CACAAGAGCTTCGGCCAGCCGGATCAGAAAAAGCAGGCAGTGCAGCGCTCGCCAGCCGGC 240
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CCGGCCATACCCAAGGGGCACCTGGAGTCGAAGCTGAAGTCGTACAACCAGTTCCACAAC 300
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 AACAAGAGCATGGAGATACGGAGCCGCGAGGTGAACGGGCGGCTGGTGCTGGAGGGCGCC 360
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CTGCGCATCTACTGGGGGGTGCAGGGAATGATCCACCTGAAGGAGGACGACGACCAGCGC 420
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 ACCGTGGTGACGGTCCGGAAGCGTAACTCGTACCGCCAAAGCACGCCCGCCTCGCTGGCC 480
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CACGCTCACGCGACGAGCGATGGGGAGGAGGAGGGCAACGAAAAGGAAAACCACCCGAAC 540
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CATGCGGACCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCGACGGGGAGCCGGTGCGATG 600
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 GGCGTCAGCACGTCCAGCCTGACCGAGCCGTGCGACAGCAACAACGACACGACCACCATC 660
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 TCGGAGAGCATCTCGTACGACACGCTCAGCCTGTCGTCCGAGCTCAACTCGAACTTCGAC 720
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 TCGAAGCCGGTCTCGTCGAGCGAATCGTCCAAGGAGGTGTCGCCGAGCCACGCGGGCAAG 780
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 TACGTGACGCTGCCGCCGAAGCTGGACGTGAAGCAGCTCGACTGGGACGAGATCGACGAG 840
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CTGCTGCAGGTGGAGCGCAAGCTGGACGAGAGCGAGAAGCTGTACCGGACGATGCCGTCC 900
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CCGCTGGCGACCGGCGGCGGTTCGGGCGGGTCCGGCGGCGACCGCAGCCTGGCGAGCGAG 960
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 AGCGTCACCGATACGGATTACAAGACGCTCACGCCCAACACGGCCACCGGGTCGTCGGGC 1020
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 GGGTCGGGCGCCGGCTCGGGCGACAGCGACCGGACGACGACCGGCGGGCCGGACACGTCC 1080
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 ACGAGCGCGGCCACCACCAGCGCGGCGACCAACGGGGACGATGACTTTCGCACGCCGGAA 1140
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 GCGACGCTCCGGTCGCACGACTTCGAAGCGTTCAAGATGCAGATTAGCCGCGAGTTTATC 1200
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 AGCAGCACGGCGGAGATGGGCAACACGGACGGTACGCTGAAGCAGAACCAGCCGATCGAT 1260
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 CCGGCCCGGATCAACGATTCGCTCAAGCTGTACAATGACGGCGTCATGAACCGGAGCCTG 1320
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 TCGGACGAGCAGTGCCGGGAATGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATC 1380
consensus_7362#1 --------CCGCCCACGCGTCCGCGATGTTTTCCCTGCCGGCCGGCAACATCACGGGATC 52
* ** * **************************************
consensus_7362#0 GTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCAACGCTGCGCCATCCGGCCAA 1440
consensus_7362#1 GTTCCACGTGGAGGCCGGTACGAACGAGGACGACGACTCTACGCTGCGCCATCCGGACAA 112
*************************************** **************** ***
consensus_7362#0 CGGCATCTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCG 1500
consensus_7362#1 CGGCATCTACGCGTCGCCCAGTCACGGCCGACAGTCGGCCAACGGTACGCCCAAGAAGCG 172
************************************************************
consensus_7362#0 GATGCACCTGCAGCGTGCGGCGCAACCGGCCGGACCCGACGCACCGACCTCGTCGGAGGC 1560
consensus_7362#1 GATGCACCTGCAGCGTGCGGCGCAACCGGCCGGACCCGACGCACCGACCTCGTCGGAGGC 232
************************************************************
consensus_7362#0 TACCACGAACGGTGCCGTTACGTCGCCGGGCACGGACACGGGACAGCTGGACGGCCGATC 1620
consensus_7362#1 TACCACTAACGGTGCCGTTACGTCGCCGGGCACGGACACGG-ACAGCTGGACGGTCGATC 291
****** ********************************** ************ *****
consensus_7362#0 GGGGTCTGCTGCGCTCCAATGTCCCAGGGCAACCACTACTCGGGCAACAGCTTCATGGAC 1680
consensus_7362#1 GGTGTCTGCTGCGCTCCAA-GTCCCAGGGCAACCACTACTCGGTGAACAGCTTCATGGAC 350
** **************** *********************** ***************
consensus_7362#0 AGCGATGTGGACGACGATAGCGGCTGTGGGGCGGTAGTGGCGGGACCGGCTCGGGTACGC 1740
consensus_7362#1 AGCGATGTGGACGACGATAGCGGCGG--GGGCGGTAGTGGCGGGACCGGCTCGGGTACGC 408
************************ * ********************************
consensus_7362#0 TCAAACCCTCCGACAAGCCGCCGTCCTCGATCCACATCCGGATGGACTGTTACGACGAGC 1800
consensus_7362#1 TCAAACCCTCCGACAAGACGCCGTTCTCGATCCACATCCGGATGGACTGTTACGACGAGC 468
***************** ****** ***********************************
consensus_7362#0 TGGAGAGCCCCTCGTCCGGTCAGTGCGATCACGCCGTCGCGAGGACGGTGAGCTGACCGC 1860
consensus_7362#1 TGGAGAGCCCCTCGTCCGGTCAG-GCGATCACGCCGTCG-GAGGACGGTGAGCTGACCGC 526
*********************** *************** ********************
consensus_7362#0 -GTGACGGCGAC-ACGCTAACGACGGCGACA--GACGACGGCGACGAAGCAAGCGTCCGA 1916
consensus_7362#1 CGTGACGGCGACCACGCTAACGACGACGACGACGACGACGGCGACGACGCAGCCGTCCG- 585
*********** ************ **** ************** *** ******
consensus_7362#0 GTACAGACCAGCATCAGCGGCACCGGTCACGGACGANGGGGTCGTGCTGGGAAGCCCGAA 1976
consensus_7362#1 ------------------------------------------------------------
consensus_7362#0 GAATGGCTCGACGGATCAGCGCCGTCGGCAC 2007
consensus_7362#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||