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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7381#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1166 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCTACACCCGCCCCCCATTACACCGTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCATATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGAAACTAACCTGGCAAAAAAGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGTGTGTTTAAACATACATTTGTAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGGATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTTTGTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCGTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACACACACACAGCAGTTCGTGGGTAAAATTCAGTTACTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAAGAGAGGAATGATTATAATGTGAAAGTAGAGTTGGACATCGCGTGAATATCGCAATAATAAGCAAGATCATCAGATGAATTGCGTGCGGGCAAAATGACTAGACGGAAGTATTTAGGTCAGCAGCATCTCGATAAAAGCAGCAGCAGCAGCACGCATTCGTCGAAACATAGAGTAACAACAAACAAACAAACAAAAAAAAAACACACAAGCGAGACACATACATACATATATATATATATTAGTACGGTGGTCCATGTGCCACCAGTAAGCTGAAACTTCAGACCGGGAATTAGATTGTAAGGATCGTAACAAATAATATGAAAAAAGGTATATTATACATACATTAATTGTAAATGATTAAATCTTAAATGGCGGTCACCAAATTGCTAATTTTTCTCAAAACGCGATCGCTCGCGGCGGCGGTGTTTTGGACGCACATTTCACGAGAGACGAGAGGACATTACATGGCTTGAAACATTACCCCCAATAATCATATCGTTCGCGTATTGCAGGGAGAGAGAAGGGGTGATATCGAACGGTTA]
[+] EMBL BM639026 [CCGCGGACGCGTGGGCGGACGCGTGGGCTACACCCGCCCCCCATTACACCGTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCATATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGAAACTAACCTGGCAAAAAAGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGTGTGTTTAAACATACATTTGTAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGGATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTTTGTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCGTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACACACACACAGCAGTTCGTGGGTAAAATTCAGTTACTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAAGAGAGGAATGATTATAATGTGAAAGTAGAGTTGGACATCGCGTGAATATCGCAATAATAAGCAA ]
[+] EMBL BM623687 [ ccgCCCGCCCCCCATTACACCGTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCATATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGAAACTAACCTGGCAAAAAAGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGTGTGTTTAAACATACATTTGTAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGGATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTTTGTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCGTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACG ]
[+] EMBL BX609218 [ ATGATGGATTTTAAAATTGTGGAGTGTTTGTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCGTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACACACACACAGCAGTTCGTGGGTAAAATTCAGTTACTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAAGAGAGGAATGATTATAATGTG AAGTAGAGTTGGACATCGCGTGAATATCGCAATAATAAGCAAGATCATCAGATGAATTGCGTGCGGGCAAAATGACTAGACGGAAGTATTTAGGTCAGCAGCATCTCGATAAAAGCAGCAGCAGCAGCACGCATTCGTCGAAACATAGAGTAACAACAAACAAACAAACAAAAAAAAAACACACAAGCGAGACACATACATACATATATATATATATTAGTACGGTGGTCCATGTGCCACCAGTAAGCTGAAACTTCAGACCGGGAATTAGATTGTAAGGATCGTAACAAATAATATGAAAAAAGGTATATTATACATACATTAATTGTAAATGATTAAATCTTAAATGGCGGTCACCAAATTGCTAATTTTTCTCAAAACGCGATCGCTCGCGGCGGCGGTGTTTTGGACGCACATTTCACGAGAGACGAGAGGACATTACATGGCTTGAAACATTACCCCCAATAATCATATCGTTCGCGTATTGCAGGGAGAGAGAAGGGGTGATATCGAACGGTTA]
consensusID : consensus_7381#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 642 fasta sequence
[CCGGTACGCTGAACATCTATATAATCCTCGAAAACCCTGTAAAAGCTACACCCGCCCCCCATTACACCGTTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCAGATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGGAACTAACCTGGCAAAAAATGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGCGTGTTTAAACATACATTTGCAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGAATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTGTTTTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACACACACAGCAGTTCGTGGGTAAAATTCAGTTATTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAA]
[+] EMBL BM634716 [CCGGTACGCTGAACATCTGTATAATCCTCGAAAACCCTGTAAAAGCTACACCCGCCCCCCATTACACCGTTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCAGATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGGAACTAACCTGGCAAAAAATGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGCGTGTTTAAACATACATTTGCAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGAATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTGTTTTTTCGGTGCCGAACTGTGTGGACTG ]
[+] EMBL BM637139 [ ccgCATCTATATAATCCTCGAAAACCCTGTAAAAGCTACACCCGCCCCCCATTACACCGTTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCAGATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGGAACTAACCTGGCAAAAAATGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGCGTGTTTAAACATACATTTGCAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGAATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTGTTTTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACACACACAGCAGTTCGTGGGTAAAATTCAGTTATTGATTCATAGCAGCATCACCCATTTCGCGTA ]
[+] EMBL BM641779 [ ccgATATAATCCTCGAAAACCCTGTAAAAGCTACACCCGCCCCCCATTACACCGTTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCAGATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGGAACTAACCTGGCAAAAAATGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGCGTGTTTAAACATACATTTGCAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGAATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTGTTTTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACA ]
[+] EMBL BM657511 [ ccgAAAAGCTACACCCGCCCCCCATTACACCGTTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCAGATTGTATTGTCGATTCGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGGAACTAACCTGGCAAAAAATGGGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGCGTGTTTAAACATACATTTGCAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGCGGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGGAAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTAGCGTGAATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTGTTTTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCTTTTTTTTATTTAACACACCAACGCAAAGCCACCAACCAAACCAGTTCACGCACACACACACAGCAGTTCGTGGGTAAAATTCAGTTATTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7381#0 ----------------CCGCGGACGCGTGGGCGGACGCGTGG--GCTACACCCGCCCCCC 42
consensus_7381#1 CCGGTACGCTGAACATCTATATAATCCTCGAAAACCCTGTAAAAGCTACACCCGCCCCCC 60
* * * * * * ** ****************
consensus_7381#0 ATTACACCGTTTTTTT-AGTTTTGCCTGTGCAGTAGTAGCATCATATTGTATTGTCGATT 101
consensus_7381#1 ATTACACCGTTTTTTTTAGTTTTGCCTGTGCAGTAGTAGCATCAGATTGTATTGTCGATT 120
**************** *************************** ***************
consensus_7381#0 CGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGAAACTAACCTGGCAAAAAA-G 160
consensus_7381#1 CGCACGAAGGTTTCAGTAAACGTATGATGATGAGGATGGGAACTAACCTGGCAAAAAATG 180
*************************************** ****************** *
consensus_7381#0 GGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGTGTGTTTAAACATACAT 220
consensus_7381#1 GGAAGTAAGCTTTACTCGCTCGCTCGAACCTCCTGCGCACTAGCGTGTTTAAACATACAT 240
******************************************* ****************
consensus_7381#0 TTGTAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGC 280
consensus_7381#1 TTGCAGCTCCCTTCCTTCATACACATTAGCAGCAGGCAACATCAGTCCGTGCTAGTGTGC 300
*** ********************************************************
consensus_7381#0 GGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGG 340
consensus_7381#1 GGTCTTTATATATTAGCTCTATATGTACGTACATTTATATATGTTGCTTGCTTCACTCGG 360
************************************************************
consensus_7381#0 AAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTA 400
consensus_7381#1 AAAGCATCTCTAAAGTGGGGTAGGATTTAATGTTGACAAACAAGGAGAAGGAGTCTAGTA 420
************************************************************
consensus_7381#0 GCGTGGATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGT-T 459
consensus_7381#1 GCGTGAATGGAAAACAAAACTGATAATGAGCATGATGGATTTTAAAATTGTGGAGTGTGT 480
***** **************************************************** *
consensus_7381#0 TGTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCCGTTTTTTTTATTTAACACACCAACG 519
consensus_7381#1 TTTTTCGGTGCCGAACTGTGTGGACTGGGGCTTCC-TTTTTTTTATTTAACACACCAACG 539
* ********************************* ************************
consensus_7381#0 CAAAGCCACCAACCAAACCAGTTCACGCACACACACACACAGCAGTTCGTGGGTAAAATT 579
consensus_7381#1 CAAAGCCACCAACCAAACCAGTTCACGCACACACACAC--AGCAGTTCGTGGGTAAAATT 597
************************************** ********************
consensus_7381#0 CAGTTACTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAAGAGAGGAATGATTAT 639
consensus_7381#1 CAGTTATTGATTCATAGCAGCATCACCCATTTCGCGTATAAGCAA--------------- 642
****** **************************************
consensus_7381#0 AATGTGAAAGTAGAGTTGGACATCGCGTGAATATCGCAATAATAAGCAAGATCATCAGAT 699
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 GAATTGCGTGCGGGCAAAATGACTAGACGGAAGTATTTAGGTCAGCAGCATCTCGATAAA 759
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 AGCAGCAGCAGCAGCACGCATTCGTCGAAACATAGAGTAACAACAAACAAACAAACAAAA 819
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 AAAAAACACACAAGCGAGACACATACATACATATATATATATATTAGTACGGTGGTCCAT 879
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 GTGCCACCAGTAAGCTGAAACTTCAGACCGGGAATTAGATTGTAAGGATCGTAACAAATA 939
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 ATATGAAAAAAGGTATATTATACATACATTAATTGTAAATGATTAAATCTTAAATGGCGG 999
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 TCACCAAATTGCTAATTTTTCTCAAAACGCGATCGCTCGCGGCGGCGGTGTTTTGGACGC 1059
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 ACATTTCACGAGAGACGAGAGGACATTACATGGCTTGAAACATTACCCCCAATAATCATA 1119
consensus_7381#1 ------------------------------------------------------------
consensus_7381#0 TCGTTCGCGTATTGCAGGGAGAGAGAAGGGGTGATATCGAACGGTTA 1166
consensus_7381#1 -----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||