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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7384#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 887 fasta sequence
[GTGACAAACGGTGACTGAGTGTGCAAGCAGCCGAGCTCCTGGGATACCAGTGGCAACGATGCATCCTCCTTCTCGCGGCACGTCTGGGTCCTGATCGGGGCCCGCTTTCTTGTCGGGATTTTCGTGTCCGGCAATGCGGCGACCTCGTACGCGTACCTGGCCGAGTTCCACGGCGAAGCATCCCGGGCGAAGGTGATCTCCTGGGCGGCCATGTTCATGTCGATCGGGCTGATACTGCTGCCGTCGCTCTCCTGGCTCATCATACCGCTGGACGCGCAGCTCGACCTCCGCCTGTTCGGCATGCGGTACGCGATGTGGCGCATCTATCTGCTGCTCTGCTCGCTCGATCTGCTGCTCATCATTGCGGGGCTGCTCTACCTGCCCGAGAGTGGAAAGTTTCTGCTCACCGGCGGCCACCGGGAGAAAGTGGTGCAAACGCTGGCCAAAATCTATCAGCTCAACCGGGGCAAACCGGCGCACACCTTCCCCGTCAAGTCGATCACCCTGGACGCGATCGACAGTGCGTACGCGGACGAGATGCAGCGGCGGTCGAAGCTCGGGCTGCGCTACCTCTGGCAGCAGACGGTGNCCCTGNTCCGGGTGCCGCTGCTCTGCCACACGCTCAAGGCGTCCGTGCTGATGTTCGGCATCTTCGCCACCTCGTCCGGCCTGTTCCTGTGGGTGCCGGACATCCTCAACACGTACGTGCAGCACCAGGATATGAAGCTGTGCGACGTGATTGCGCTGATGCACGCGAACAAAACGGCGGCCCGGTCCGGCGACAGCGTCTGCCCGATCGCAATCAACGCCAACATCTTCCTGATCACGTCCGCGATGGGGGTCGTCTTTCTCGCCTGCTACATCCTGAACGGCTTCATCATCAACCG]
[+] EMBL BX623966 [GTGACAAACGGTGACTGAGTGTGCAAGCAGCCGAGCTCCTGGGATACCAGTGGCAACGATGCATCCTCCTTCTCGCGGCACGTCTGGGTCCTGATCGGGGCCCGCTTTCTTGTCGGGATTTTCGTGTCCGGCAATGCGGCGACCTCGTACGCGTACCTGGCCGAGTTCCACGGCGAAGCATCCCGGGCGAAGGTGATCTCCTGGGCGGCCATGTTCATGTCGATCGGGCTGATACTGCTGCCGTCGCTCTCCTGGCTCATCATACCGCTGGACGCGCAGCTCGACCTCCGCCTGTTCGGCATGCGGTACGCGATGTGGCGCATCTATCTGCTGCTCTGCTCGCTCGATCTGCTGCTCATCATTGCGGGGCTGCTCTACCTGCCCGAGAGTGGAAAGTTTCTGCTCACCGGCGGCCACCGGGAGAAAGTGGTGCAAACGCTGGCCAAAATCTATCAGCTCAACCGGGGCAAACCGGCGCACACCTTCCCCGTCAAGTCGATCACCCTGGACGCGATCGACAGTGCGTACGCGGACGAGATGCAGCGGCGGTCGAAGCTCGGGCTGCGCTACCTCTGGCAGCAGACGGTGNCCCTGNTCCGGGTGCCGCTGCTCTGCC ]
[+] EMBL BX613466 [ TGCCGTCGCTCGCCTGGCTCATCATACCGCTGGACGCGCAGCTCGACCTCCGCCTGTTCGGCATGCGGTACGCGATGTGGCGCATCTATCTGCTGCTCTGCTCGCTCGATCTGCTGCTCATCATTGCGGGGCTGCTCTACCTGCCCGAGAGTGGAAAGTTTCTGCTCACCGGCGGCCACCGGGAGAAAGTGGTGCAAACGCTGGCCAAAATCTATCAGCTCAACCGGGGCAAACCGGCGCACACCTTCCCCGTCAAGTCGATCACCCTGGACGCGATCGACAGTGCGTACGCGGACGAGATGCAGCGGCGGTCGAAGCTCGGGCTGCGCTACCTCTGGCAGCAGACGGTGCCCCTGTTCCGGGTGCCGCTGCTCTGCCACACGCTCAAGGCGTCCGTGCTGATGTTCGGCATCTTCGCCACCTCGTCCGGCCTGTTCCTGTGGGTGCCGGACATCCTCAACACGTACGTGCAGCACCAGGATATGAAGCTGTGCGACGTGATTGCGCTGATGCACGCGAACAAAACGGCGGCCCGGTCCGGCGACAGCGTCTGCCCGATCGCAATCAACGCCAACATCTTCCTGATCACGTCCGCGATGGGGGTCGTCTTTCTCGCCTGCTACATCCTGAACGGCTTCATCATCAACCG]
consensusID : consensus_7384#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 863 fasta sequence
[ATNGCCGAGNGGTGCCCTGTTCGGGTGCGCTGCTCTGCCACACGCTCAAGGCGTCCGTGCTGATGTTCGGCATCTTCGCCACCTCGTCCGGCCTGTTCCTGTGGGTGCCGGACATCCTCAACACGTACGTGCAGCACCAGGATATGAAGCTGTGCGACGTGATTGCGCTGATGCACGCGAACAAAACGGCGGCCCGGTCCGGCGACAGCGTCTGCCCGATCGCAATCAACGCCAACATCTTCCTGATCACGTCCGCGATGGGGGTCGTCTTTCTCGCCTGCTACATCCTGAACGGCTTCATCATCAACCGGGTCGGCAAGCGGACACTGCTCAACGGTTGGTTCGTGGTGTGCGGTATCTGCGGGCTCGCCGTGCTGTGGACTTCCGATTTCTATCTGACGCTGATACTGATCGCTGCCTTCGTCTCGTCTGGCTGCCTCGGTGGCGTCCTAAGTGCAATATCGGTCGACCTATTTCCGACTAATTACCGGGCAATGGCAATGTGCCTGATTCTGATGACGGGCCGGTTCGGGGCAATGGCCGGCAGCAACATTATCGCCTATCTGCTCACGTACAACTGCAATCTGATCTTCATACTGTTCGGCGGCTCGCTGCTAGTTTGTGCTCTAATTGGAGCAACCTTAACGGAAACGTGACAGGCCAGCTATTCGAAAAATGTTTAATGGCTGCCTGCCCGAACCCCCCCTCTCCCTCCCCTTGGGACACGTGACAGGTGACTTGCAGAGCTGCCCTCCTCCTCCTTCACCAGCTGGAAAGCAGCAGCAGCAGAACCGTGGGCAAAAGTGTTGCCAGCATCAGTAAACCGTCTTGAAGGATCTCTACTCACACACCTGCTTCCAGCC]
[+] EMBL AL931203 [ATNGCCGAGNGGTGCCCTGTTCGGGTGCGCTGCTCTGCCACACGCTCAAGGCGTCCGTGCTGATGTTCGGCATCTTCGCCACCTCGTCCGGCCTGTTCCTGTGGGTGCCGGACATCCTCAACACGTACGTGCAGCACCAGGATATGAAGCTGTGCGACGTGATTGCGCTGATGCACGCGAACAAAACGGCGGCCCGGTCCGGCGACAGCGTCTGCCCGATCGCAATCAACGCCAACATCTTCCTGATCACGTCCGCGATGGGGGTCGTCTTTCTCGCCTGCTACATCCTGAACGGCTTCATCATCAACCGGGTCGGCAAGCGGACACTGCTCAACGGTTGGTTCGTGGTGTGCGGTATCTGCGGGCTCGCCGTGCTGTGGACTTCCGATTTCTATCTGACGCTGATACTGATCGCTGCCTTCGTCTCGTCTGGCTGCCTCGGTGGCGTCCTAAGTGCAATATCGGTCGACC ]
[+] EMBL BM627159 [ ccGCTTCATCATCAACCGGGTCGGCAAGCGGACACTGCTCAACGGTTGGTTCGTGGTGTGCGGTATCTGCGGGCTCGCCGTGCTGTGGACTTCCGATTTCTATCTGACGCTGATACTGATCGCTGCCTTCGTCTCGTCTGGCTGCCTCGGTGGCGTCCTAAGTGCAATATCGGTCGACCTATTTCCGACTAATTACCGGGCAATGGCAATGTGCCTGATTCTGATGACGGGCCGGTTCGGGGCAATGGCCGGCAGCAACATTATCGCCTATCTGCTCACGTACAACTGCAATCTGATCTTCATACTGTTCGGCGGCTCGCTGCTAGTTTGTGCTCTAATTGGAGCAACCTTAACGGAAACGTGACAGGCCAGCTATTCGAAAAATGTTTAATGGCTGCCTGCCCGAACCCCCCCTCTCCCTCCCCTTGGGACACGTGACAGGTGACTTGCAGAGCTGCCCTCCTCCTCCTTCACCAGCTGGAAAGCAGCAGCAGCAGAACCGTGGGCAAAAGTGTTGCCAGCATCAGTAAACCGTCTTGAAGGATCTCTACTCACACACCTGCTTCCAGCC]
consensusID : consensus_7384#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 701 fasta sequence
[CCG-GGGACGTTGGCACGGCACGATTGGCCGTCGGATAGACCAAACACTTTGGTTGGTGCCGCAGTGACAAACGGTGACTGAGTGTGCAAGCAGCCGAGCTCCTGGGATACCAGTGGCAACGATGCATCCTGCAGCGGACGACCAGCGTCGAGCCGAGGACAGTGTCGGCAACGGTGCGGCGACACACAAATCGGCCGAAATTGTCATCGACCCAGCGCAGGTTGGTGCGCAGAATGGGAGCGCGACGCCCGTCCCGAGTCATACGTACAGCGAAG-CCCTCGCCGTGGTC-GGACAGGGCCGGTTCCACACGCTGCTCCTGTTCATTACCGGCCTCTGCCTGATGAGCGTCGTCAACGAGAC-GGTCAACGTGGGCTTCATCATCTC-GGCCGCCGAGTGCGACCTGGAGCTTAGCTTCAGCGACAAGGGCATACTG--AACGGGGCCGGCTTTAT--GGGCGTGGTGGTCAGCTCGTACGTGTGGGGCTTCCTGTCCGACACGTGGGGCCGCCGCCGGGTACTGCTGCTCGCGTCCTCCGGCGCACTGGTCACCTCCGTGCTGTCCTCCTTCTCGCCGCACGTCTGGGTCCTGATCGGGGCCCGCTTTTCTTGTCGGGATTTTCGTGTCCGGCAATGCGGCGACCTCGTACGCGTACCTGGCCGAGTTCCACGGCGAAGCATCCCCGGGGCGAAGGTGATCTCCTGGG]
[+] EMBL BM582838 [CCG GGGACGTTGGCACGGCACGATTGGCCGTCGGATAGACCAAACACTTTGGTTGGTGCCGCAGTGACAAACGGTGACTGAGTGTGCAAGCAGCCGAGCTCCTGGGATACCAGTGGCAACGATGCATCCTGCAGCGGACGACCAGCGTCGAGCCGAGGACAGTGTCGGCAACGGTGCGGCGACACACAAATCGGCCGAAATTGTCATCGACCCAGCGCAGGTTGGTGCGCAGAATGGGAGCGCGACGCCCGTCCCGAGTCATACGTACAGCGAAG CCCTCGCCGTGGTC GGACAGGGCCGGTTCCACACGCTGCTCCTGTTCATTACCGGCCTCTGCCTGATGAGCGTCGTCAACGAGAC GGTCAACGTGGGCTTCATCATCTC GGCCGCCGAGTGCGACCTGGAGCTTAGCTTCAGCGACAAGGGCATACTG AACGGGGCCGGCTTTAT GGGCGTGGTGGTCAGCTCGTACGTGTGGGGCTTCCTGTCCGACACGTGGGGCCGCCGCCGGGTACTGCTGCTCGCGTCCTCCGGCGCACTGGTCACCTCCGTGCTGTCCTCCTTCTCGCCGCACGTCTGGGTCCTGATCGGGGCCCGCTTTTCTTGTCGGGATTTTCGTGTCCGGCAATGCGGCGACCTCGTACGCGTACCTGGCCGAGTTCCACGGCGAAGCATCCCCGGGGCGAAGGTGATCTCCTGGG]
[+] EMBL BM577017 [CCGCGGGACGTTGGCACGGCACGATTGGCCGTCGGATAGACCAAACACTTTGGTTGGTGCCGCAGTGACAAACGGTGACTGAGTGTGCAAGCAGCCGAGCTCCTGGGATACCAGTGGCAACGATGCATCCTGCAGCGGACGACCAGCGTCGAGCCGAGGACAGTGTCGGCAACGGTGCGGCGACACACAAATCGGCCGAAATTGTCATCGACCCAGCGCAGGTTGGTGCGCAGAATGGGAGCGCGACGCCCGTCCCGAGTCATACGTACAGCGAAGCCCCTCGCCGTGGTCGGGACAGGGCCGGTTCCACACGCTGCTCCTGTTCATTACCGGCCTCTGCCTGATGAGCGTCGTCAACGAGACGGGTCAACGTGGGCTTCATCATCTCGGGCCGCCGAGTGCGACCTGGAGCTTAGCTTCAGCGACAAGGGCATACTGGAAACGGGGCCGGCTTTATGGGGGCGTGGTGGTCAGCTCGgt ]
[+] EMBL BM634837 [ ccgGTTGGCACGGCACGATTGGCCGTCGGATAGACCAAACACTTTGGTTGGTGCCGCAGTGACAAACGGTGACTGAGTGTGCAAGCAGCCGAGCACCTGGGATACCAGTGGCAACGATGCATCCTGCAGCGGACGACCAGCGTCGAGCCGAGGACAGTGTCGGCAACGGTGCGGCGACACACAAATCGGCCGAAATTGTCATCGACCCAGCGCAGGTTGGTGCGCAGAATGGGAGCGCGACGCCCGTCCAGAGTCATACGTACAGCGAAG CCCTCGTCGTGGTC GGACAGGGCCGGTTCCACACGCTGCTCCTGTTCATTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7384#0 -GTGACAAACGGTGACT-----GAGTGTGCAAG-CAGCCGAGCTCCTGGGATACCAGTGG 53
consensus_7384#1 ATNGCCGAGNGGTGCCCTGTTCGGGTGCGCTGCTCTGCCACACGCTCAAGGCGTCCGTGC 60
consensus_7384#2 ------------------------------------------------------------
consensus_7384#0 CAACGAT--GCATCCTCCTTCTCGCGGCACGTCTGGGTCCTGATCGGGGCCCGCTTTCTT 111
consensus_7384#1 TGATGTTCGGCATCTTCGCCACCTCGTCCGGCCT--GTTCCTGTGGGTGCCGGACATCCT 118
consensus_7384#2 ---------CCGGGGACGTTGGCACGGCACGATTG-GCCGTCGGATAGACCAAACACTTT 50
* * * ** * * * * ** *
consensus_7384#0 GTCGGGATTTTCGTGTCCGGCAATGCGGCGACCTCGTACG-CGTACCTG-GCCGAGTTCC 169
consensus_7384#1 --CAACACGTACGTGCAGCACCAGGATATGAAGCTGTGCGACGTGATTGCGCTGATGCAC 176
consensus_7384#2 ----GGTTGGTGCCGCAGTGACAAACGGTGACTGAGTGTG---CAAGCA-GCCGAGCTCC 102
* * ** ** * ** ** *
consensus_7384#0 ACGGCGAA----GCATCCCGGGCGAAGGTGATCTCCTGGGCGGCCATGTTCA-TGTCGA- 223
consensus_7384#1 GCGAACAAAACGGCGGCCCGGTCCGGCGACAGCGTCTGCCCGATCGCAATCAACGCCAAC 236
consensus_7384#2 TGGGATA---------CCAGTGGCAACGATGCATCCTGCA-GCGGACGACCAGCGTCGA- 151
* * ** * * *** * ** * * *
consensus_7384#0 -TCGGGCTGAT-ACTGCTGCC------GTCGCTCTCCTGGCTCATCATACCGCTGGACGC 275
consensus_7384#1 ATCTTCCTGATCACGTCCGCGATGGGGGTCGTCTTTCTCGCCTGCTACATC-CTGAACG- 294
consensus_7384#2 -----GCCGAGGACAGTGTCG----GCAACGGTGCGGCGACACACAAATCGGCCGAAATT 202
* ** ** * ** * * * * *
consensus_7384#0 GCAGCTCGACCTCCGCCTGTTCGGCATGCGGTACGCGA-TGTGGCGCATCTATCTGCTGC 334
consensus_7384#1 --GCTTCATCATCAACCGGGTCGGCAAGCGG-ACACTG-CTCAACG-GTTGGTTCG-TGG 348
consensus_7384#2 G-TCATCGACCCAGCGCAGGTTGGTGCGCAGAATGGGAGCGCGACG--CCCGTCCCGAGT 259
** * * * * ** ** * * ** * *
consensus_7384#0 TCTGCTCGCT-CGATCTGCTGCTCATCATTGCGGGGCTGCTCTACCTGCCCGAGAGTGGA 393
consensus_7384#1 TGTGCGGTAT-CTGCGGGCTCGCCGT-GCTGTGGACTTCCGATTTCTATCTGACGCTG-A 405
consensus_7384#2 CATACGTACAGCGAAGCCCTCGCCGTGGTCGGACAGGGCCGGT-TCCACACGCTGCTC-C 317
* * * ** * * * * * * * *
consensus_7384#0 AAGTTTCTGCTCACCGGCGGCCACCGGGAGAAAGTGGTGCAAACGCTGGC-CAAAATCTA 452
consensus_7384#1 TACTGATCGCTGCCTTCGTCTCGTCTGGCTGCCTCGGTGGCGTCCTAAGTGCAATATCGG 465
consensus_7384#2 TGTTCATTACCGGCCTCTGCCTGATGAGCGTCGTCAACGAGACGGTCAACGTGGGCTTCA 377
* * * * * *
consensus_7384#0 TCAGCTCAACCG----GGGCAAACCGGCGCACACCTTCCCCGTCAAGTCGATCACCCTGG 508
consensus_7384#1 TCGACCTATTTC----CGACTAATTACCGGGCAATG-----GCAATGTGCCTGATTCTGA 516
consensus_7384#2 TCATCTCGGCCGCCGAGTGCGACCTGGAGCTTAGCTTCAGCGACAAGGG---CATACTGA 434
** * * * * * * * * * ***
consensus_7384#0 ACGCGATCGACAGTGCGTACGCGGACGAGATGCAGCGGCGGTCGAAGCTCGGGCTGCGCT 568
consensus_7384#1 TGACGGGCCGGTTCGGGGCAATGGCCGGCA-GCAACATTA-TCGCCTATCTGCTCACG-T 573
consensus_7384#2 ACGGGGCCGGCTTTATGGGCGTGGTGGTCA-GCTCGTACGTGTGGGGCTTCCTGTCCGAC 493
* * * ** * * ** * * **
consensus_7384#0 ACCTCTGGCAGCAGACGGTGNCCCTGNTCCGGGTGCCGCTGCTCTGCCACACGCTCAAGG 628
consensus_7384#1 ACAACTGCAATCTGATCTTCATACTGTTCGGCGGCTCGCTGCTAGTTTGTGCTCTAATTG 633
consensus_7384#2 ACGTGGGGCCGCCGCCG--GGTACTGCT-----GCTCGC-GTCCTCCGGCGCACTGGTCA 545
** * * * *** * *** * * **
consensus_7384#0 CGTCCGTGCTGATGTTCGGCATCTTCGCCACCTCGTCCGGCCTGTTCCTGTGGGTGCCGG 688
consensus_7384#1 GAGCAACCTTAACGGAAACGTGACAGGCCAGCTATTCGAAAAATGTTTAATGGCTGCCTG 693
consensus_7384#2 CCTCCGTGCTGTCCTCC----TTCTCGCCGCACGTCTGGGTCCTGATCGGGGCCCGCTTT 601
* * *** * **
consensus_7384#0 ACATCCTCAACACGTACGTGCAGCACCAGGATATGAAGCTGTGCGACGTGATTGCGCTGA 748
consensus_7384#1 CCCGAACCCCCCCTCTCCCTCC-CCTTGGGACACGTGACAG-GTGACTTG-CAGAGCTGC 750
consensus_7384#2 TC-TTGTCGGGATTTTCGTGTCCGGCAATGCGGCGACCTCGTACG-CGTACCTG-GCCGA 658
* * * * * * * * * * ** *
consensus_7384#0 TGCACGCGAACAAAACGGCGGCCCGGTC-CGGCGACAGCGTCTGCCCGATCGCAATCAAC 807
consensus_7384#1 CCTCCTCCTCCTTCAC--CAGCTGGAAAGCAGCAGCAGCAGAACCGTGGGCAAAAGTGTT 808
consensus_7384#2 GTTCCACGG-CGAAGCATC--CCCGG----GGCGAAGGTGATCTCCTGGG---------- 701
* * * * * * * ** * * *
consensus_7384#0 GCCAACATCTTCCTGATCACGTCCGCGATGGGGGTCGTCTTTCTCGCCTGCTACATCCTG 867
consensus_7384#1 GCCAGCATCAG--TAAAC-CGTCT-TGAAGGATCTCTACTCACACACCTGCTTCCAGCC- 863
consensus_7384#2 ------------------------------------------------------------
consensus_7384#0 AACGGCTTCATCATCAACCG 887
consensus_7384#1 --------------------
consensus_7384#2 --------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||