These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_74#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence [CCGCAAACTGGCCAACAATGTTCCGCGATCGTACCATCGCCCAAAATGCTCACTGACAGCATGGTAAAAAGTGAAGAAAATAACCCCAACAACCTCGCGACGAGCCAGCGAAAACTGTTTGAAAGCAAATGGAATTGGGAATCCGAGTCCGTGTACGTGTACGACCGGTCGAAATTGCTGACTGCGCCCGACGTACGCCGCCTGTGCTGCAGCGATCCCACCAACGAAATCACACCCGGGTGACAAGAGGAGGTAGAGCGAAAGTAGCAAGTACGTCACATCGTGACGACACAACCAACGCCGCCAACACCACCGCCACCACCACCACCACCACAATCAACGACAGAATCAGCAGGAAGTAACGTCGCACCGGGACCGGCCCCAACATGGCGCTTCTGCGCTCGATAATCGATCTGATGGATCTGATTGGATGCGATCTGGGAGGACTGATCGAGATAATACGCTTCATTTGGCGCTGCATCGTGGAGACCCTCGTCAGCGTCCAGCTGCAGCGCTTGCTGGGCGATGGCACGGGACGAGGGGGAGGCAATGGATCGAACCGCGCCGAAATGTGTCTGCTGTGAATGCAATCTAGTGGGCCAACAAACCAGAGGAGCCACTTTAAACGTCTTCCGCACAAGAAAGTTTAGTGAATAGTTTAAATGGTATCAC] [+] EMBL BM629387 [CCGCAAACTGGCCAACAATGTTCCGCGATCGTACCATCGCCCAAAATGCTCACTGACAGCATGGTAAAAAGTGAAGAAAATAACCCCAACAACCTCGCGACGAGCCAGCGAAAACTGTTTGAAAGCAAATGGAATTGGGAATCCGAGTCCGTGTACGTGTACGACCGGTCGAAATTGCTGACTGCGCCCGACGTACGCCGCCTGTGCTGCAGCGATCCCACCAACGAAATCACACCCGGGTGACAAGAGGAGGTAGAGCGAAAGTAGCAAGTACGTCACATCGTGACGACACAACCAACGCCGCCAACACCACCGCCACCACCACCACCACCACAATCAACGACAGAATCAGCAGGAAGTAACGTCGCACCGGGACCGGCCCCAACATGGCGCTTCTGCGCTCGATAATCGATCTGATGGATCTGATTGGATGCGATCTGGGAGGACTGATCGAGATAATACGCTTCATTTGGCGCTGCATCGTGGAGACCCTCGTCAGCGTCCAGCTGCAGCGCTTGCTGGGCGATGGCACGGGACGAGGGGGAGGCAATGGATCGAACCGCGCCGAAATGTGTCTGCTGTGAATGCAATCTAGTGGGCCAACAAACCAGAGGAGCCACTTTAAACGTCTTCCGCACAAGAAAGTTTAGTGAATAGTTTAAATGGTATCAC] consensusID : consensus_74#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 373 fasta sequence [CCGGTCGGATCATGGAACAGGAGGTAAGCATCGTGACGTGCCATCAGTGAAACGTGTTCATTCCTGCACCAATCGCTAGTGCCGCGAGTGGGAGTGGGGGGGGGGGGGGTGAAACGAATCTCAACAAACTGGCCAACAATGTTCCGCGATCGTACCATCGCCCAAAATGCTCACTGGCAGCATGGTCAAAAGTGAAGAAACTAACCCCAACAACCTCGCGACGAGCCAGCGAAAACTGTTTGAAAGCAAATGGTCCGTTTACGTGTACGACCTGTCGAAATTGCTTACTGCGCCCTACGTACGCCACCTGTGCTGCAGCGATCCCACCAACCAAATCACACCCGTGTGACAAGAGGAGGTAGAGCGAAAGTAG] [+] EMBL BM630929 [CCGGTCGGATCATGGAACAGGAGGTAAGCATCGTGACGTGCCATCAGTGAAACGTGTTCATTCCTGCACCAATCGCTAGTGCCGCGAGTGGGAGTGGGGGGGGGGGGGGTGAAACGAATCTCAACAAACTGGCCAACAATGTTCCGCGATCGTACCATCGCCCAAAATGCTCACTGGCAGCATGGTCAAAAGTGAAGAAACTAACCCCAACAACCTCGCGACGAGCCAGCGAAAACTGTTTGAAAGCAAATGGTCCGTTTACGTGTACGACCTGTCGAAATTGCTTACTGCGCCCTACGTACGCCACCTGTGCTGCAGCGATCCCACCAACCAAATCACACCCGTGTGACAAGAGGAGGTAGAGCGAAAGTAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_74#0 ------------------------------------------------------------ consensus_74#1 CCGGTCGGATCATGGAACAGGAGGTAAGCATCGTGACGTGCCATCAGTGAAACGTGTTCA 60 consensus_74#0 ------------------------------------------------------------ consensus_74#1 TTCCTGCACCAATCGCTAGTGCCGCGAGTGGGAGTGGGGGGGGGGGGGGTGAAACGAATC 120 consensus_74#0 -CCGCAAACTGGCCAACAATGTTCCGCGATCGTACCATCGCCCAAAATGCTCACTGACAG 59 consensus_74#1 TCAACAAACTGGCCAACAATGTTCCGCGATCGTACCATCGCCCAAAATGCTCACTGGCAG 180 * **************************************************** *** consensus_74#0 CATGGTAAAAAGTGAAGAAAATAACCCCAACAACCTCGCGACGAGCCAGCGAAAACTGTT 119 consensus_74#1 CATGGTCAAAAGTGAAGAAACTAACCCCAACAACCTCGCGACGAGCCAGCGAAAACTGTT 240 ****** ************* *************************************** consensus_74#0 TGAAAGCAAATGGAATTGGGAATCCGAGTCCGTGTACGTGTACGACCGGTCGAAATTGCT 179 consensus_74#1 TGAAAGCAAATGG---------------TCCGTTTACGTGTACGACCTGTCGAAATTGCT 285 ************* ***** ************* ************ consensus_74#0 GACTGCGCCCGACGTACGCCGCCTGTGCTGCAGCGATCCCACCAACGAAATCACACCCGG 239 consensus_74#1 TACTGCGCCCTACGTACGCCACCTGTGCTGCAGCGATCCCACCAACCAAATCACACCCGT 345 ********* ********* ************************* ************ consensus_74#0 GTGACAAGAGGAGGTAGAGCGAAAGTAGCAAGTACGTCACATCGTGACGACACAACCAAC 299 consensus_74#1 GTGACAAGAGGAGGTAGAGCGAAAGTAG-------------------------------- 373 **************************** consensus_74#0 GCCGCCAACACCACCGCCACCACCACCACCACCACAATCAACGACAGAATCAGCAGGAAG 359 consensus_74#1 ------------------------------------------------------------ consensus_74#0 TAACGTCGCACCGGGACCGGCCCCAACATGGCGCTTCTGCGCTCGATAATCGATCTGATG 419 consensus_74#1 ------------------------------------------------------------ consensus_74#0 GATCTGATTGGATGCGATCTGGGAGGACTGATCGAGATAATACGCTTCATTTGGCGCTGC 479 consensus_74#1 ------------------------------------------------------------ consensus_74#0 ATCGTGGAGACCCTCGTCAGCGTCCAGCTGCAGCGCTTGCTGGGCGATGGCACGGGACGA 539 consensus_74#1 ------------------------------------------------------------ consensus_74#0 GGGGGAGGCAATGGATCGAACCGCGCCGAAATGTGTCTGCTGTGAATGCAATCTAGTGGG 599 consensus_74#1 ------------------------------------------------------------ consensus_74#0 CCAACAAACCAGAGGAGCCACTTTAAACGTCTTCCGCACAAGAAAGTTTAGTGAATAGTT 659 consensus_74#1 ------------------------------------------------------------ consensus_74#0 TAAATGGTATCAC 672 consensus_74#1 ------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||