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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7409#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1138 fasta sequence
[CCGATTGTTTACTACGGAACATTCAAGAAATTACAACACACTTTGTACGTTTTGTGCATAATTTCGCCGCTCGAATCTTTAAAACATTATCGTGCCTTTTTATTGCAAAGAAAAATGGACGTCTTGGCGACGTGTCGACTGTGCCTCGAACCGTACGCACCCGTAAATGGCAGTTTCTGTCTGAGCAACGACTCCTTTCAAGCGGCGATACAGCGTGTATTCTCCTTCGAGCTTAAACCGGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTTTGGGAGTTCTTCTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGTGCAGGCGAATGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATCATCATTGTTGATGACACCGATAATGTTGCGGCGGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCCGCAGACCGAGGTCAGTGCTGGAGGTGCTGGCACGCCCAGGTTGCAAGATGGCACAACAGTGGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATATCCTGCAAGAGCTGGAAAATGAAGACACCGAAAATACTAGACCGCGTGACGTGAACAAGAACTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTTTATGAAAAACAAACTCAAATCTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCAGCTAGCTAGCCACAGTTGCAGCTCGCCTCGCTCTAAAATACGATCCGTTGTGCAGGCGAACGGCGGCATGGCGCAAAGTACCGGCGATCGGAAGCAGTGTAACACGGAACCTCATGAGCAAAGCGATGCAGAAGACGCTTCGGACAATGATCTCCAGGTTCTCGCATTATGTAGAGCAATGCTCGATACTACTGACTCAAGCCTGAGATCGAATGAGGAAGAAGAAGCATCCAATCTGCCACCGGCCGATGGAGCGTCCTTCCCATGCGATCAATGCGAACGTACCTTTCCACCAAAAAGCAGCGTACTAAGCACCAGTACCATCACAAAACGACAGAATGTCCGATCTGTAGGAAAGAGATAAA]
[+] EMBL BM633872 [CCGATTGTTTACTACGGAACATTCAAGAAATTACAACACACTTTGTACGTTTTGTGCATAATTTCGCCGCTCGAATCTTTAAAACATTATCGTGCCTTTTTATTGCAAAGAAAAATGGACGTCTTGGCGACGTGCCGACTGTGCCTCGAACCGTACGCACCCGTAAACGGCAGTTTCTGTCTGAGCAACGACTCCTTTCAAGCGGCGATACAGCGTGTATTCTCCTTCGAGCTTAAACCGGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTTTGGGAGTTCTTCTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGTGCAGGCGAATGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATCATCATTGTTGATGACACCGATAATGTTGCGGCGGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCCGCAGACCGAGGTCAGTGCTGGAGGTGCTGGCACGCCCAGGTTGCAAGATGGCACAACAGTGGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATATCCTGCAAGAGCTGGAAAATGAAGACACCGAAAATACTAGACCGCGTGACGTGAACAAGAACTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTTT ]
[+] EMBL CNS08ZNN [ TTTTCTTTTGATCATTCAATAAATTACAACACACTTTGTACGTTTCGTGCATAATTTCGCCGCTCGAATCTTTAAAACATTATCGTGCCTTTTTATTGCAAAGAAAAATGGACGTCTTGGCGACGTGTCGACTGTGCCTCGAACCGTACGCACCCGTAAATGGCAGTTTCTGTCTGAGCAACGACTCCTTTCAAGCGGCGATACAGCGTGTATTCTCCTTCGAGCTTAAACCGGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTATGTGAGTTCTTCTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGTGCAGGCGAATGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATTATTATTGTGGATGACACCGATAATGTTGCGGCGGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCCGCAGACCGAAGTCAGTGCTGGAGGTGCTGGCACGCCCAGGTTGCAAGATGGCACAACAGTGGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATATCCTGCAAGAACTGGAAAATGAAGACACCGAAAATACTAGACCGCATGACGTGAACAAGAACTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTTTATGAAAAACAAACTCAAATCTCTATCTTGCGGTCGTTGTAAGCAATCATTTGCCCAAAAGAGTCAGCTAGCTGGCCACAGTTGCAGCTCGCCTCGCTCTAAAATACGATCCGTTGTGCAGGCGAACGGCGGCATGGCGCAAAGTACCGGCGATCGGAAGCAGTCTAACACG ]
[+] EMBL CNS08P1N [ GGACGTCTTGGCGACGTGTCGACTGTGCCTCGAACCGTACGCACCCGTAAATGGCAGTTTCTGTCTGAGCAACGACTCCTTTCAAGCGGCGATACAGCGTGTATTCTCCTTCGAGCTTAAACCGGAACAAAGCCTG ]
[+] EMBL CNS08LTT [ AATCTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCAGCTAGCTAGCCACAGTTGCAGCTCGCCTCGCTCTAAAATACGATCCGTTGTGCAGGCGAACGGCGGCATGGCGCAAAGTACCGGCGATCGGAAGCAGTGTAACACGGAACCTCATGAGCAAAGCGATGCAGAAGACGCTTCGGACA ]
[+] EMBL CNS08LX9 [ CTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCAGCTAGCTAGCCACAGTTGCAGCTCGCCTCGCTCTAAAATACGATCCGTTGTGCAGGCGAACGGCGGCATGGCGCAAAGTACCGGCGATCGGAAGCAGTGTAACACGGAACCTCATGAGCAAAGCGATGCAGAAGACGCTTCGGACAATGATCTCCAGGTTCTCGCATTATGTAGAGCAATGCTCGATACTACTGACTCAAGCCTGAGATCGAATGAGGAAGAAGAAGCATCCAATCTGCCACCGGCCGATGGAGCGTCCTTCCCATGCGATCAATGCGAACGTACCTTTCCACCAAAAAGCAGCGTACTAAGCACCAGTACCATCACAAAACGACAGAATGTCCGATCTGTAGGAAAGAGATAAA]
[+] EMBL CNS08LWR [ cattAAGACGCTTCGGACAATGATCTCCAGGTTCTCGCATTATGTAGAGCAATGCTCGATACTACTGACTCAAGCCTGAGATCGAATGAGGAAGAAGAAGCATCCAATCTGCCACCGGCCGATGGAGCGTCCTTCCCATGCTATCAATGCTAACGTATCTTT ]
consensusID : consensus_7409#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence
[CCGCGGACGCGTGGGTCGAGCTTAAACCGGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTATGGGAGTTCTTCTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGCGCAGGCGAATGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATCATCATTGTGGATGACACCGATAATGTTGCGGCTGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCCGCAGACAGAGGTCAGTGCTAGTGGTACTGGCACGCCCAGGTTGGAAGATGGCACAACAGTGGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATATCCTGCAAGAGCTGGAAAATGAAGACACCGAAAATACTAGACCGCGTGACGTGAACAAGAACTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTATATGAAAAACAAACTCAAATCTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCA]
[+] EMBL BM613829 [CCGCGGACGCGTGGGTCGAGCTTAAACCGGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTATGGGAGTTCTTCTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGCGCAGGCGAATGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATCATCATTGTGGATGACACCGATAATGTTGCGGCTGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCCGCAGACAGAGGTCAGTGCTAGTGGTACTGGCACGCCCAGGTTGGAAGATGGCACAACAGTGGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATATCCTGCAAGAGCTGGAAAATGAAGACACCGAAAATACTAGACCGCGTGACGTGAACAAGAACTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTATATGAAAAACAAACTCAAATCTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7409#0 CCGATTGTTTACTACGGAACATTCAAGAAATTACAACACACTTTGTACGTTTTGTGCATA 60
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 ATTTCGCCGCTCGAATCTTTAAAACATTATCGTGCCTTTTTATTGCAAAGAAAAATGGAC 120
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 GTCTTGGCGACGTGTCGACTGTGCCTCGAACCGTACGCACCCGTAAATGGCAGTTTCTGT 180
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 CTGAGCAACGACTCCTTTCAAGCGGCGATACAGCGTGTATTC-TCCTTCGAGCTTAAACC 239
consensus_7409#1 --------------------------------CCGCGGACGCGTGGGTCGAGCTTAAACC 28
** * * * * *************
consensus_7409#0 GGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTTTGGGAGTTCTT 299
consensus_7409#1 GGAACAAAGCCTGCCCGAATATGCATGTGGCATGTGCTCGATCAAAGTATGGGAGTTCTT 88
************************************************ ***********
consensus_7409#0 CTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGTGCAGGCGAA 359
consensus_7409#1 CTCCTTCAGCAAGTTGGTAGAGGAGAACCAACAAAAACTGCTGTGTTTGGCGCAGGCGAA 148
************************************************** *********
consensus_7409#0 TGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATCATCATTGTTGATGA 419
consensus_7409#1 TGTGGAAGAGTGCAACACCCTAATGGAGGACAAAAAGAACGTTATCATCATTGTGGATGA 208
****************************************************** *****
consensus_7409#0 CACCGATAATGTTGCGGCGGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCC 479
consensus_7409#1 CACCGATAATGTTGCGGCTGCGAATAGCGCGCCCCCAAACGCTGCCATTGATGACGGGCC 268
****************** *****************************************
consensus_7409#0 GCAGACCGAGGTCAGTGCTGGAGGTGCTGGCACGCCCAGGTTGCAAGATGGCACAACAGT 539
consensus_7409#1 GCAGACAGAGGTCAGTGCTAGTGGTACTGGCACGCCCAGGTTGGAAGATGGCACAACAGT 328
****** ************ * *** ***************** ****************
consensus_7409#0 GGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATAT 599
consensus_7409#1 GGAGAGAGTGGCTTCGAAAACAGTTGGGACGATTGATGGCATTGAGCTTGATGAGCATAT 388
************************************************************
consensus_7409#0 CCTGCAAGAGCTGGAAAATGAAGACACCGAAAATACTAGACCGCGTGACGTGAACAAGAA 659
consensus_7409#1 CCTGCAAGAGCTGGAAAATGAAGACACCGAAAATACTAGACCGCGTGACGTGAACAAGAA 448
************************************************************
consensus_7409#0 CTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTTTATGAAAAACAA 719
consensus_7409#1 CTTGGAAAAGCCTCGTAAAACCGCAAAAATACTATTACGATCTATTTATATGAAAAACAA 508
*********************************************** ************
consensus_7409#0 ACTCAAATCTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCAGCTAGC 779
consensus_7409#1 ACTCAAATCTCTATCTTGCGGTCGGTGTAAGCAATCATTTGCCCAAAAGAGTCA------ 562
******************************************************
consensus_7409#0 TAGCCACAGTTGCAGCTCGCCTCGCTCTAAAATACGATCCGTTGTGCAGGCGAACGGCGG 839
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 CATGGCGCAAAGTACCGGCGATCGGAAGCAGTGTAACACGGAACCTCATGAGCAAAGCGA 899
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 TGCAGAAGACGCTTCGGACAATGATCTCCAGGTTCTCGCATTATGTAGAGCAATGCTCGA 959
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 TACTACTGACTCAAGCCTGAGATCGAATGAGGAAGAAGAAGCATCCAATCTGCCACCGGC 1019
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 CGATGGAGCGTCCTTCCCATGCGATCAATGCGAACGTACCTTTCCACCAAAAAGCAGCGT 1079
consensus_7409#1 ------------------------------------------------------------
consensus_7409#0 ACTAAGCACCAGTACCATCACAAAACGACAGAATGTCCGATCTGTAGGAAAGAGATAAA 1138
consensus_7409#1 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||