These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7436#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1249 fasta sequence [CCGCATTGCTTGCTTAGATCAAGAATATAGTCTCTTGTTTCAATTTATTGTACTATCATCAAAATGGAAACGGAAAACTTACAACCTGTTGCTGCATTACCTAATGTGAATGCTTCACTTGGATTGATTCCCAATAAACGTCCCATTTGTGTCATTGTTCTTGGCATGGCTGGTTCGGGTAAAACAACTTTTGTGAAGAAGTTAGCGCAATACCGCCATGCAAATGGCTCATTGCCCTACTTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGTGATACGATAAAATACAAGGAAGTTATGAAA-CGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTTATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACCTTTATGTCTAATATGTTATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAA-TTTCGCGATGCAGT-GGATGCAAGATTTTGAAGCGTTTCAAGAATCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTT-AAAATCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATTTGAAAATTT-GTTCATGCTACTAAACGAAGCTGTCGA-TGAATATGACAGTGATTATAAACAGGAGTATAATAAATTACGAGCAGAACGGGTAAACAATTCAGGAGAGCATTTTAAACAACCTCCAAACGGCCACTTGGGTGAAGAAGTGTCTTTTCGAAGCTATAACAATGAGAAAAATCTATGTAATGAACCGATTTATTTAAAACATCCTGCAAATGAAAGTTCCGATGATGAAGAAGGACAAGAATGTGAAGGTTCAATCATAACTACGGGAGACGACGAAGCGGAAGAAATAAACTTCAACAATTATATTCAACAGCACCGTCGTCAACAAGCTGAAAAACATGGAAAACAATTCAACAAATCATTGTGAAAATTTCTGTGTAATAAATTTCAATTCCCCGTGCAAA] [+] EMBL BM614503 [CCGCATTGCTTGCTTAGATCAAGAATATAGTCTCTTGTTTCAATTTATTGTACTATCATCAAAATGGAAACGGAAAACTTACAACCTGTTGCTGCATTACCTAATGTGAATGCTTCACTTGGATTGATTCCCAATAAACGTCCCATTTGTGTCATTGTTCTTGGCATGGCTGGTTCGGGTAAAACAACTTTTGTGAAGAAGTTAGCGCAATACCGCCATGCAAATGGCTCATTGCCCTACTTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGTGATACGATAAAATACAAGGAAGTTATGAAA CGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTTATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACCTTTATGTCTAATATGTTATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAATTTTCGCGATGCAGTGGGATGCA ] [+] EMBL BX622647 [ ACTATCATCAAAATGGAAACGGAAAACTTACAACCTGTTGCTGCATTACCTAATGTGAATGCTTCACTTGGATTGATTCCCAATAAACGTCCCATTTGTGTCATTGTTCTTGGCATGGCTGGTTCGGGTAAAACAACTTTTGTGAAGAAGTTAGCGCAATACCGCCATGCAAATGGCTCATTGCCGTACTTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGTGATACGATAAAATACAAGGAAGTTATGAAA CGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTTATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACCTTTATGTCTAATATGTTATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAA TTTCGCGATGCAGT GGATGCAAGATTTTGAAGCGTTTCAAGAATCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTTAAAAATCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATTTGAAAATTT GNTCATGCTACTAAACGAAGCTGTCGA TGAATATGACAGT ] [+] EMBL BX625471 [ AAGTTAGCGCAATACCGCCATGCAAATGGCTCATTGCCCTACTTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGTGATACGATAAAATACAAGGAAGTTATGAAA CGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTTATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACCTTTATGTCTAATATGTTATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAA TTTCGCGATGCAGT GGATGCAAGATTTTGAAGCGTTTCAAGAATCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTT AAAATCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATTTGAAAATTTGGTTCATGCTACTAAACGAAGCTGTCGA TGAATATGACAGTG ] [+] EMBL CNS08CKR [ acacacATACAAGGAAGTTATGAAACCGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTTATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTTATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTA CTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACCTTTATGTCTAATATATTATATGCGTGTCCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAA TTTCGCGATGCAGT GGATGCAAGATTTTGAAGCGTTTCAAGAATCATTGGAAAACGAGAATCCTTACATAAGTTATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTT AAAATCG ] [-] EMBL CNS08CKS [ TCAACTAGTCCAACCACCTTTATGTCTAATATGTAATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCCACATACAGGGACATAA TTTCGCGATGCAGT GGATGCAAGATTTTGAAGCGTTTCAAAAATAATTGGAAAACGAGACTGCTTACATAAGTAATTTTAAACGTACGATGTCTTTAACACTCGACGAGTTTTATAAAAACTT AAAATCGTGTGGAGTTTCCTCAAACACGGGCATAGGATTTGAAAATTT GTTCATGCTACTAAACGAAGCTGTCGATTGAATATTACAGTGATTATAAACAGGAGTATAATAAATTACGAGCAGAACGGGTAAACAATTCAGGAGAGCATTTTAAACAACCTCCAAACGGCCACTTGGGTGAAGAAGTGTCTTTTCGAAGCTATAACAATGAGAAAAATCTATGTAATGAACCGATTTATTTAAAACATCCTGCAAATGAAAGTTCCGATGATGAAGAAGGACAAGAATGTGAAGGTTCAATCATAACTACGGGAGACGACGAAGCGGAAGAAATAAACTTCAACAATTATATTCAACAGCACCGTCGTCAACAAGCTGAAAAACATGGAAAACAATTCAACAAATCATTGTGAAAATTTCTGTGTA ] [+] EMBL BX617045 [ GTTTCAAGAATCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTT AAAATCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATTTGAAAATTT GTTCATGCTACTAAACGAAGCTGTCGA TGAATATGACAGTGATTATAAACAAGAGTATAATAAATTACGAGCAGAACGGGTAAACAATTCAGCAGAGCATTTTACACAACCTCCAAACGGCGACTTGGGTGAAGAAGTGTCTTTTCGAAGCTATAACAATGAAAAAAATCTATGTAATGAACCGGTTTATTTAAAACATCCTGCAAATGAAAGTTCCGATGATGAAGAAGGACAAGAATGTGAAGGTTCAATCATAACTACGGGAGACGACGAAGCGGAAGAAATAAACTTCAACAATTATATTCAGCAGCACCGTCGTCAACAAGCTGAAAAACATGGAAAACAATTCAACAAATCATTGTGAAAATTTCTGTGTAATAAATTTCAATTCCCCGTGCAAA] consensusID : consensus_7436#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 710 fasta sequence [CCGCCCACGCGTCCGAAATGGCTCATTGCCCTACTTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGTGATACGATAAAATACAAGGAAGTTATGAAACGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTAATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACGTTTATGTCTAATATGTTATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAATTTCGCGATGCAGTGGATGCAAGATTTTGAAGCGTTTCAAGAATCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTTAAAATTCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATTTGAAAATTTGTTCATGCTACTGGAACGAAGCTGTCGATGAATATGACAGTGATTATAAACAGGAGTATAATAAATT] [+] EMBL BM581987 [CCGCCCACGCGTCCGAAATGGCTCATTGCCCTACTTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGTGATACGATAAAATACAAGGAAGTTATGAAACGCTACAATCTTGGTCCAAATGGAGGAATAGTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAATGCACAGAAAACGCATGAATATTGTGTAATAGACACCCCGGGACAAATAGAAGTATTTACATGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATTGTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACGTTTATGTCTAATATGTTATATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATCGACATACAGGAACATAATTTCGCGATGCAGTGGATGCAAGATTTTGAAGCGTTTCAAGAATCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTCGACGAGTTTTATAAAAACTTAAAATTCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATTTGAAAATTTGTTCATGCTACTGGAACGAAGCTGTCGATGAATATGACAGTGATTATAAACAGGAGTATAATAAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7436#0 CCGCATTGCTTGCTTAGATCAAGAATATAGTCTCTTGTTTCAATTTATTGTACTATCATC 60 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 AAAATGGAAACGGAAAACTTACAACCTGTTGCTGCATTACCTAATGTGAATGCTTCACTT 120 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 GGATTGATTCCCAATAAACGTCCCATTTGTGTCATTGTTCTTGGCATGGCTGGTTCGGGT 180 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 AAAACAACTTTTGTGAAGAAGTTAGCGCAATACCGCCATGCAAATGGCTCATTGCCCTAC 240 consensus_7436#1 --------------------------CCGCCCACGCGTCCGAAATGGCTCATTGCCCTAC 34 * *** ******************* consensus_7436#0 TTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGT 300 consensus_7436#1 TTAATTAATTTAGATCCTGCGTGCCACGAAACTCCCTATCCAGTAAACATTGATATCCGT 94 ************************************************************ consensus_7436#0 GATACGATAAAATACAAGGAAGTTATGAAACGCTACAATCTTGGTCCAAATGGAGGAATA 360 consensus_7436#1 GATACGATAAAATACAAGGAAGTTATGAAACGCTACAATCTTGGTCCAAATGGAGGAATA 154 ************************************************************ consensus_7436#0 GTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAAT 420 consensus_7436#1 GTTACAGCTTTAAACTTGTTTTCCACTAAATTTGGAAAAGTGATTGATCTGATTGAAAAT 214 ************************************************************ consensus_7436#0 GCACAGAAAACGCATGAATATTGTGTTATAGACACCCCGGGACAAATAGAAGTATTTACA 480 consensus_7436#1 GCACAGAAAACGCATGAATATTGTGTAATAGACACCCCGGGACAAATAGAAGTATTTACA 274 ************************** ********************************* consensus_7436#0 TGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATT 540 consensus_7436#1 TGGTCGGCATCTGGCACAATAATTACTGAGGCGTTAGCTACTGCATTTCCTACTGTTATT 334 ************************************************************ consensus_7436#0 GTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACCTTTATGTCTAATATGTTA 600 consensus_7436#1 GTATACGTAATGGATATCGTCCGTTCAACTAGTCCAACCACGTTTATGTCTAATATGTTA 394 ***************************************** ****************** consensus_7436#0 TATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATC 660 consensus_7436#1 TATGCGTGTTCTATCTTGTACAAAGCACGTTTACCTTTCGTTATTGCAATGAACAAAATC 454 ************************************************************ consensus_7436#0 GACATACAGGAACATAATTTCGCGATGCAGTGGATGCAAGATTTTGAAGCGTTTCAAGAA 720 consensus_7436#1 GACATACAGGAACATAATTTCGCGATGCAGTGGATGCAAGATTTTGAAGCGTTTCAAGAA 514 ************************************************************ consensus_7436#0 TCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTC 780 consensus_7436#1 TCATTGGAAAACGAGACTGCTTACATAAGTAATCTTACACGTACGATGTCTTTGACACTC 574 ************************************************************ consensus_7436#0 GACGAGTTTTATAAAAACTTAAAAT-CGTGTGGAGTTTCCTCAAAGACGGGCATAGGATT 839 consensus_7436#1 GACGAGTTTTATAAAAACTTAAAATTCGTGTGGAGTTTCCTCAAAGACGGGCATAGGATT 634 ************************* ********************************** consensus_7436#0 TGAAAATTTGTTCATGCTACTA-AACGAAGCTGTCGATGAATATGACAGTGATTATAAAC 898 consensus_7436#1 TGAAAATTTGTTCATGCTACTGGAACGAAGCTGTCGATGAATATGACAGTGATTATAAAC 694 ********************* ************************************* consensus_7436#0 AGGAGTATAATAAATTACGAGCAGAACGGGTAAACAATTCAGGAGAGCATTTTAAACAAC 958 consensus_7436#1 AGGAGTATAATAAATT-------------------------------------------- 710 **************** consensus_7436#0 CTCCAAACGGCCACTTGGGTGAAGAAGTGTCTTTTCGAAGCTATAACAATGAGAAAAATC 1018 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 TATGTAATGAACCGATTTATTTAAAACATCCTGCAAATGAAAGTTCCGATGATGAAGAAG 1078 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 GACAAGAATGTGAAGGTTCAATCATAACTACGGGAGACGACGAAGCGGAAGAAATAAACT 1138 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 TCAACAATTATATTCAACAGCACCGTCGTCAACAAGCTGAAAAACATGGAAAACAATTCA 1198 consensus_7436#1 ------------------------------------------------------------ consensus_7436#0 ACAAATCATTGTGAAAATTTCTGTGTAATAAATTTCAATTCCCCGTGCAAA 1249 consensus_7436#1 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||