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Anopheles gambiae
cluster # 7468 cluster # 7468       Sequences # 7       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7468#0 length = 1292 sequences # 2  
consensus_7468#1 length = 940 sequences # 2  
consensus_7468#2 length = 617 sequences # 1  
consensus_7468#3 length = 557 sequences # 1  
consensus_7468#4 length = 328 sequences # 1  

consensusID : consensus_7468#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1292
fasta sequence
                              [TTCCTGCGCGATTTATTATGCGGTATCAATTATGGTACCTATCTACCGTGGTCGTTGTTCGCCGATATGGGCAATTGTTGGTCAATCGAATATGTTCAAGTACTTTTTTGTGCCTTGCATTAGCAGCTTTAAAACGAAAAAAAAAACAAACAAACATTTAGCTTAGTTAGAAGGATTTGCTAAGCATCTACCTGCTAATGTCTTTGGTACGGATTGGAGTAGGAAAATTGTGACGAGAATCATTAATTCACATGAGTTTCGCTTGGCGTCAGACTCTGCTTGCGTGTGCGATATCGTGCCAATCCTGTGCGTAAAAGGTCTCGATTCTCAAAACTCCACGTACCAACGGATAAGCTCGTGCAAAGCGCACCAACTAACAGGTGGCATACAATTGAACGCCCGCTAAAGTATGCCTCTGACACTTTGCACACTATACCGGAAACTATTAGCACGCTCAGGTACATCGGCCCGGGCAGGGACTTTTGCAACGGGTTCATCCCAATCGATCGGAAGTGCTTGTTGATGTAAAACACGCTATAACTGATCCGGAAGCTCATGTTGCAGCAATTCGCCAGTATAAAGCCAACCGGACCGAACCAATTGGTAAGCTGATAGGACAGCAACAAAAAGGTGACGGAGAAGAAAGCCATATAGTAGTTGTAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCGGGGCAAGCAGAACGATTTTTTAGGCTGTTCCAACGGAGCAGCTGCTCGGGCAGGCCACCTTCAACGAAATCTGCTCCACCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACACGAACGCCAACAGACCGATCGACGTTACCGTTTTCATTACGTACGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCCACCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCCGTTAACACTTGCTTCAAGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAATCCTCCATATTTTCAAAATGCTGTCCGTACTGGTCACGCAGCACGTACTTGCGG]

[+] EMBL CNS08FAO             [TTCCTGCGCGATTTATTATGCGGTATCAATTATGGTACCTATCTACCGTGGTCGTTGTTCGCCGATATGGGCAATTGTTGGTCAATCGAATATGTTCAAGTACTTTTTTGTGCCTTGCATTAGCAGCTTTAAAACGAAAAAAAAAACAAACAAACATTTAGCTTAGTTAGAAGGATTTGCTAAGCATCTACCTGCTAATGTCTTTGGTACGGATTGGAGTAGGAAAATTGTGACGAGAATCATTAATTCACATGAGTTTCGCTTGGCGTCAGACTCTGCTTGCGTGTGCGATATCGTGCCAATCCTGTGCGTAAAAGGTCTCGATTCTCAAAACTCCACGTACCAACGGATAAGCTCGTGCAAAGCGCACCAACTAACAGGTGGCATACAATTGAACGCCCGCTAAAGTATGCCTCTGACACTTTGCACACTATACCGGAAACTATTAGCACGCTCAGGTACATCGGCCCGGGCAGGGACTTTTGCAACGGGTTCATCCCAATCGATCGGAAGTGCTTGTTGATGTAAAACACGCTATAACTGATCCGGAAGCTCATGTTGCAGCAATTCGCCAGTATAAAGCCAACCGGACCGAACCAATTGGTAAGCTGATAGGACAGCAACAAAAAGGTGACGGAGAAGAAAGCCATATAGTAGTTGTAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCGGGGCAAGCAGAACGATTTTTTAGGCTGTTCCAACGGAGCAGCTGCTCGGGCAGGCCACCTTCAACGAAATCTGCTCCACCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACACGAACGCCAACAGACCGATCGACGTTACCGTTTTCATTACGTACGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCCACCAGCGCCGAATCGCGTGCAATGGTTT                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BM610302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCAATTGGTAAGCTGATAGGACAGCAACAAAAAGGTGACGGAGAAGAAAGCCATATAGTAGTTGTAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCGGGGCAAGCAGAACGA TTGCAAGGCTGTGCCAACGGAGCAGCTGCTCGGGCAGGCCACCTTCAACGAAATCTGCTCCACCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACACGAACGCCAACAGACCGATCGACGTTACCGTTTTCATTACGTACGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCG    CCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCCGTTAACACTTGCTTCAAGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAATCCTCCATATTTTCAAAATGCTGTCCGTACTGGTCACGCAGCACGTACTTGCGG]


>consensus_7468#0 TTCCTGCGCGATTTATTATGCGGTATCAATTATGGTACCTATCTACCGTGGTCGTTGTTC GCCGATATGGGCAATTGTTGGTCAATCGAATATGTTCAAGTACTTTTTTGTGCCTTGCAT TAGCAGCTTTAAAACGAAAAAAAAAACAAACAAACATTTAGCTTAGTTAGAAGGATTTGC TAAGCATCTACCTGCTAATGTCTTTGGTACGGATTGGAGTAGGAAAATTGTGACGAGAAT CATTAATTCACATGAGTTTCGCTTGGCGTCAGACTCTGCTTGCGTGTGCGATATCGTGCC AATCCTGTGCGTAAAAGGTCTCGATTCTCAAAACTCCACGTACCAACGGATAAGCTCGTG CAAAGCGCACCAACTAACAGGTGGCATACAATTGAACGCCCGCTAAAGTATGCCTCTGAC ACTTTGCACACTATACCGGAAACTATTAGCACGCTCAGGTACATCGGCCCGGGCAGGGAC TTTTGCAACGGGTTCATCCCAATCGATCGGAAGTGCTTGTTGATGTAAAACACGCTATAA CTGATCCGGAAGCTCATGTTGCAGCAATTCGCCAGTATAAAGCCAACCGGACCGAACCAA TTGGTAAGCTGATAGGACAGCAACAAAAAGGTGACGGAGAAGAAAGCCATATAGTAGTTG TAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTC GGGGCAAGCAGAACGATTTTTTAGGCTGTTCCAACGGAGCAGCTGCTCGGGCAGGCCACC TTCAACGAAATCTGCTCCACCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAA CACGAACGCCAACAGACCGATCGACGTTACCGTTTTCATTACGTACGCAAGGACGTCCGA TGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCCACCAGCGCCGAATCGCGTGCAATGG TTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCA GGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGC TAACGGACATGACGTACTTTTCACCCTCCGTTAACACTTGCTTCAAGACTCCCTGCTTCG CGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCA CTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAATCCTCCATATTTTCAAAATGCT GTCCGTACTGGTCACGCAGCACGTACTTGCGG



consensusID : consensus_7468#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 940
fasta sequence
                              [GGTGGCAGAAGTTCTCTGCTCCGAGGACTGGCTTTTTTCACAAGGCCAGGATGCAGTAGTTGGGCTGCGGACATATACGATCCCCATAATTTCTTCCGTAGAAGCTAAGTGTTCACATCATTGTTGCATGTGTTATATGTTTTGTGTGGTGGTTGTAAACAGACAAACACTTAATTCGCCATGGGTCGAAATGTTCTTGTTAGCAGCTTGCAGAATGCCTCCTTCAGTATCGTCTTTCAGGTAATGAATACAGGTGTATTTTAGAGATTTACCAGTTACGTCTCGTTCGTTCATTTTATTTCAGATTATATGCCGATGTATTACGTTCGCCATCAACGCATTCATAGTGCGGAACGTTGGACGGGAAGTACTTGGAATCACGAACGTACGACTGCTGCTCCTCGAAAGCACTCTGCTCTTCCTGTCGAAGGAAGCAATCATCCGATCAGCTCTTAGCTCACGCCACAATAAGCAATGTAGTTGGGCTCAGCTGATAAATCAACTCTGGATCACCGTTCCAGTATGTTTCACGCTCACCCTGCCGTGCTTATACATATGGCTGAACTGGCTATCGGCAGTGGATGCTATCTACGCCGAGCAGTATCGGTTCGGTTGTTTCGCGATA-CATTTTCGTGCATCATTGAAATGACGGCAGAGGCACCGATCTTCGTAGGGCAGGTGTTTTGTTTTGTGAAGCTGAAAGTCATCCTTGACACCGGCTACATCTTCATACGATCGTTCATCTTCATCTTGATCGTGCTGATGAACAAGGACATTACCATATATGCTTTCGGAATTGCACAAATCACCAGTGCATGCACAATTATAGTCGGAAACTATGCCTTCTACTACTTTTACATCCCGAAGCTGCTGCAGTATCGGAAGGATCTCAAAAAAGTTGACGACAAGTACGTGCTGCGTGACCAGTACGGACAGCATT]

[+] EMBL CNS08FAN             [GGTGGCAGAAGTTCTCTGCTCCGAGGACTGGCTTTTTTCACAAGGCCAGGATGCAGTAGTTGGGCTGCGGACATATACGATCCCCATAATTTCTTCCGTAGAAGCTAAGTGTTCACATCATTGTTGCATGTGTTATATGTTTTGTGTGGTGGTTGTAAACAGACAAACACTTAATTCGCCATGGGTCGAAATGTTCTTGTTAGCAGCTTGCAGAATGCCTCCTTCAGTATCGTCTTTCAGGTAATGAATACAGGTGTATTTTAGAGATTTACCAGTTACGTCTCGTTCGTTCATTTTATTTCAGATTATATGCCGATGTATTACGTTCGCCATCAACGCATTCATAGTGCGGAACGTTGGACGGGAAGTACTTGGAATCACGAACGTACGACTGCTGCTCCTCGAAAGCACTCTGCTCTTCCTGTCGAAGGAAGCAATCATCCGATCAGCTCTTAGCTCACGCCACAATAAGCAATGTAGTTGGGCTCAGCTGATAAATCAACTCTGGATCACCGTTCCAGTATGTTTCACGCTCACCCTGCCGTGCTTATACATATGGCTGAACTGGCTATCGGCAGTGGATGCTATCTACGCCGAGCAGTATCGGTTCGGTTGTTTCGCGATA CATTTTCGTGCATCATTGAAATGACGGCAGAGGCACCGATCTTCGTAGGGCAGGTGTTTTGTTTTGTGAAGCTGAAAGTCATCCTTGACACCGGCTACATCTTCATACGATCGTTCATCTTCATCTTGATCGTGCTGATGAACAAGGACATTACCATATATGCTTTCGGAATTGCACAAATCACCAGTGCATGCACAATTATAGTCGGAAACTATGCCTTCTACTACTTTTACATCCCGAAGCTGCTGCAGTATCGGAAGGATCTCAAAAAAGTTGACGACAAGTACGTGCTGCGTGACCAGTACGGACAGCATT]
[+] EMBL BX604028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACCCTGCCGTGCTTATAC TATGGCTGAACTGGCTATCGGCAGTGGATGCTATCTACGCCGAGCAGTATCGGTTCGGTTGTTTCGCGATAGCATTTTCGTGCATCATTGAAATGACGGCAGAGGCACCGATCTTCGTAGGGCAGGTGTTTTGTTTTGTGAAGCTGAAAGTCATCCTTGACACCGGCCACATCTTCATACGATCGTTCATCTTCATCTTGATCGTGCTGATGAACAAGGACATTACCATATATGCTTTCGGAATTGCACAAATCACCAGTGCATGCACAATTATAGTCGGAAACTATGCCTTCTACTACTTTTATATCCC                                                                             ]


>consensus_7468#1 GGTGGCAGAAGTTCTCTGCTCCGAGGACTGGCTTTTTTCACAAGGCCAGGATGCAGTAGT TGGGCTGCGGACATATACGATCCCCATAATTTCTTCCGTAGAAGCTAAGTGTTCACATCA TTGTTGCATGTGTTATATGTTTTGTGTGGTGGTTGTAAACAGACAAACACTTAATTCGCC ATGGGTCGAAATGTTCTTGTTAGCAGCTTGCAGAATGCCTCCTTCAGTATCGTCTTTCAG GTAATGAATACAGGTGTATTTTAGAGATTTACCAGTTACGTCTCGTTCGTTCATTTTATT TCAGATTATATGCCGATGTATTACGTTCGCCATCAACGCATTCATAGTGCGGAACGTTGG ACGGGAAGTACTTGGAATCACGAACGTACGACTGCTGCTCCTCGAAAGCACTCTGCTCTT CCTGTCGAAGGAAGCAATCATCCGATCAGCTCTTAGCTCACGCCACAATAAGCAATGTAG TTGGGCTCAGCTGATAAATCAACTCTGGATCACCGTTCCAGTATGTTTCACGCTCACCCT GCCGTGCTTATACATATGGCTGAACTGGCTATCGGCAGTGGATGCTATCTACGCCGAGCA GTATCGGTTCGGTTGTTTCGCGATACATTTTCGTGCATCATTGAAATGACGGCAGAGGCA CCGATCTTCGTAGGGCAGGTGTTTTGTTTTGTGAAGCTGAAAGTCATCCTTGACACCGGC TACATCTTCATACGATCGTTCATCTTCATCTTGATCGTGCTGATGAACAAGGACATTACC ATATATGCTTTCGGAATTGCACAAATCACCAGTGCATGCACAATTATAGTCGGAAACTAT GCCTTCTACTACTTTTACATCCCGAAGCTGCTGCAGTATCGGAAGGATCTCAAAAAAGTT GACGACAAGTACGTGCTGCGTGACCAGTACGGACAGCATT



consensusID : consensus_7468#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 617
fasta sequence
                              [ACTTTTGCAACGGGTTCATCCCAATCGAGCGGAAGTGCTTGGCTGATGTAAAACACGCTATAACTGATCCGGAAGCTCATGTTGCAGCAATTCGCCAGTATGAAACCAACCGGACCGAACCAATTGGTAAGGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCAGTTAACACTTGCTTCAGGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAATCGTCCATATTTTCAAAATGCTGTCCGTACTGGTCACGCAGCACGTACTTGTCGTCAACCTTTTTGAGATCCTTCCGATACTGCAGCAGCTTCGGGATGTAAAAGTAGTAGAAGGCATAATTTCCTGTGCCGATTCTG]

[-] EMBL BX466330             [ACTTTTGCAACGGGTTCATCCCAATCGAGCGGAAGTGCTTGGCTGATGTAAAACACGCTATAACTGATCCGGAAGCTCATGTTGCAGCAATTCGCCAGTATGAAACCAACCGGACCGAACCAATTGGTAAGGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCAGTTAACACTTGCTTCAGGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAATCGTCCATATTTTCAAAATGCTGTCCGTACTGGTCACGCAGCACGTACTTGTCGTCAACCTTTTTGAGATCCTTCCGATACTGCAGCAGCTTCGGGATGTAAAAGTAGTAGAAGGCATAATTTCCTGTGCCGATTCTG]


>consensus_7468#2 ACTTTTGCAACGGGTTCATCCCAATCGAGCGGAAGTGCTTGGCTGATGTAAAACACGCTA TAACTGATCCGGAAGCTCATGTTGCAGCAATTCGCCAGTATGAAACCAACCGGACCGAAC CAATTGGTAAGGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCA GCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGAC GGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCT CGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCAGTTAACACTT GCTTCAGGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACA TAGAGTTCGGATTTGGTAGCACTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAAT CGTCCATATTTTCAAAATGCTGTCCGTACTGGTCACGCAGCACGTACTTGTCGTCAACCT TTTTGAGATCCTTCCGATACTGCAGCAGCTTCGGGATGTAAAAGTAGTAGAAGGCATAAT TTCCTGTGCCGATTCTG



consensusID : consensus_7468#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence
                              [TATAGTAGTTGTAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCGGGGCAAGCAGAACGATTGCAAGGCTGTGCCAACGGAGCAGCTGCTCGGGCAGCCCACCTTCAACGAAATCTGCTCCGCCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACACGAACGCCAACAGACCGATCGACGTTCCCGTTTTCATTACGTACGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCAGTTAACACTTGCTTCAGGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACCGGACGCGTG]

[-] EMBL BM620457             [TATAGTAGTTGTAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCGGGGCAAGCAGAACGATTGCAAGGCTGTGCCAACGGAGCAGCTGCTCGGGCAGCCCACCTTCAACGAAATCTGCTCCGCCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACACGAACGCCAACAGACCGATCGACGTTCCCGTTTTCATTACGTACGCAAGGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGTACTTTTCACCCTCAGTTAACACTTGCTTCAGGACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACCGGACGCGTG]


>consensus_7468#3 TATAGTAGTTGTAGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGG TGATGCCGTTCGGGGCAAGCAGAACGATTGCAAGGCTGTGCCAACGGAGCAGCTGCTCGG GCAGCCCACCTTCAACGAAATCTGCTCCGCCGTACAAAAGCAACACCGTGCCGGAGTAGC TCTGCGCAAACACGAACGCCAACAGACCGATCGACGTTCCCGTTTTCATTACGTACGCAA GGACGTCCGATGCTTCCTGTACCATTTCGCGCTTCTGCTCCGCCAGCGCCGAATCGCGTG CAATGGTTTGCGTAAAGTAGAAGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGG CTGCCAGGCTGCCCATATTATTGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCA CCGGGCTAACGGACATGACGTACTTTTCACCCTCAGTTAACACTTGCTTCAGGACTCCCT GCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTG GTAGCACCGGACGCGTG



consensusID : consensus_7468#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 328
fasta sequence
                              [ACTTGGAGTAGGAAAATTGTGACGAGAATCATTAATTCACATGAGTTTCCCTTGGCGTCAGACTCCTGCTTGCGTGTGCGATATCGTGCCAATCCTGTGCGTAAAAGGTCTCGATTTTCAAAACTCCACGTACCAACGGATAAGCCCGTGCAAAGCGCACCAACTAACAGGTGGCATACAATTGAACGCCCGCTAAAGTATGCCTCCGACACTTTGCACACTATACCGGAAACTATTAGGACGCTCAGGTACATCGGCCCGGGCACGGACTTTTGCAACGGGTTCATCCCAATCGAGCGGAAGTGACNCCTCGTGCCGATTCTGCTGG]

[-] EMBL BX469346             [ACTTGGAGTAGGAAAATTGTGACGAGAATCATTAATTCACATGAGTTTCCCTTGGCGTCAGACTCCTGCTTGCGTGTGCGATATCGTGCCAATCCTGTGCGTAAAAGGTCTCGATTTTCAAAACTCCACGTACCAACGGATAAGCCCGTGCAAAGCGCACCAACTAACAGGTGGCATACAATTGAACGCCCGCTAAAGTATGCCTCCGACACTTTGCACACTATACCGGAAACTATTAGGACGCTCAGGTACATCGGCCCGGGCACGGACTTTTGCAACGGGTTCATCCCAATCGAGCGGAAGTGACNCCTCGTGCCGATTCTGCTGG]


>consensus_7468#4 ACTTGGAGTAGGAAAATTGTGACGAGAATCATTAATTCACATGAGTTTCCCTTGGCGTCA GACTCCTGCTTGCGTGTGCGATATCGTGCCAATCCTGTGCGTAAAAGGTCTCGATTTTCA AAACTCCACGTACCAACGGATAAGCCCGTGCAAAGCGCACCAACTAACAGGTGGCATACA ATTGAACGCCCGCTAAAGTATGCCTCCGACACTTTGCACACTATACCGGAAACTATTAGG ACGCTCAGGTACATCGGCCCGGGCACGGACTTTTGCAACGGGTTCATCCCAATCGAGCGG AAGTGACNCCTCGTGCCGATTCTGCTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7468#0      ------------------------------------------------------------
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      GGTGGCAGAAGTTCTCTGCTCCGAGGACTGGCTTTTTTCACAAGGCCAGGATGCAGTAGT 60
                                                                                  

consensus_7468#0      ------------------------------------------------------------
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      TGGGCTGCGGACATATACGATCCCCATAATTTCTTCCGTAGAAGCTAAGTGTTCACATCA 120
                                                                                  

consensus_7468#0      ---------------------------------------------TTCCTGCGCGATTTA 15
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------TATAGTAGTTGT 12
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      TTGTTGCATGTGTTATATGTTTTGTGTGGTGGTTGTAAACAGACAAACACTTAATTCGCC 180
                                                                                  

consensus_7468#0      TTATGCGGTATCAATTATGGTACCTATCTACCGTGGTCGTTGTTCGCCGATATGGGCAAT 75
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      AGGTATCGATCTGTTTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCG 72
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ATGGGTCGAAATGTTCTTGTTAGCAGCTTGCAGA-ATGCCTCCTTCAGTATCGTCTTTCA 239
                                                                                  

consensus_7468#0      TGTTGGTCAATCGAATATGTTCAAGTACTTTTTTGTGCCTTGCATTAGCAGCTTTAAAAC 135
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      GGGCAAGCAGAACGATTGCAAGGCTGTGCCAACGGAGCAGCTGCTCGGGCAGCCCACCTT 132
consensus_7468#2      ---------------------------------ACTTTTGCAACGGGTTCATCCCAATCG 27
consensus_7468#1      -GGTAATGAATACAGGTGTATTTTAGAGATTTACCAGTTACGTCTCGTTC-GTTCATTTT 297
                                                                                  

consensus_7468#0      GAAAAAAAAAACAAACAAACATTTAGCTTAGTTAGAAGGATTTGCTAAGCATCTACCTGC 195
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      CAACGAAATCTGCTCCGCCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACA 192
consensus_7468#2      AGCGGAAGTGCTTGGCTGATGTAAAACACGCTATAACTGATCCGGAAGCTCATGTTGCAG 87
consensus_7468#1      ATTTCAGATTATATGCCGATGTATTACGTTCGCCATCAACGCATTCATAGTGCGGAACGT 357
                                                                                  

consensus_7468#0      TAATGTCTTTGGT-ACGGATTGGAGTAGGAAAATT-GTGACGAGAATCATTAATTCACAT 253
consensus_7468#4      -----------------ACTTGGAGTAGGAAAATT-GTGACGAGAATCATTAATTCACAT 42
consensus_7468#3      CGAACGCCAACAG-ACCGATCGACGTTCCCGTTTTCATTACGTACGCAAGGACGTCCGAT 251
consensus_7468#2      CAATTCGCCAGTA-TGAAACCAACCGGACCGAACCAATTGGTAAGGCAAGGACGTCCGAT 146
consensus_7468#1      TGGACGGGAAGTACTTGGAATCACGAACGTACGACTGCTGCTC-CTCGAAAGCACTCTGC 416
                                                                      *           

consensus_7468#0      GAGTTTCGC-------TTGGCGTCAGACTC-TGCTT---GCGTGTGCGATATCGTGC-CA 301
consensus_7468#4      GAGTTTCCC-------TTGGCGTCAGACTCCTGCTT---GCGTGTGCGATATCGTGC-CA 91
consensus_7468#3      GCTTCCTGT-------ACCATTTCGCGCTTCTGCTCC--GCCAGCGCCGAATCGCGTGCA 302
consensus_7468#2      GCTTCCTGT-------ACCATTTCGCGCTTCTGCTCC--GCCAGCGCCGAATCGCGTGCA 197
consensus_7468#1      TCTTCCTGTCGAAGGAAGCAATCATCCGATCAGCTCTTAGCTCACGCCACAATAAGCAAT 476
                         *                            ***    **    **   *    *    

consensus_7468#0      ATCCTGTGCGTAAAAGGT--CTCGATTCTCA-AAACTCCACGTACCAACGGATAAGCTCG 358
consensus_7468#4      ATCCTGTGCGTAAAAGGT--CTCGATTTTCA-AAACTCCACGTACCAACGGATAAGCCCG 148
consensus_7468#3      ATGGTTTGCGTAAAGTAG--AAGTAGCTGCT-ATCTTCGATGGGACGGAAGATGAATCTG 359
consensus_7468#2      ATGGTTTGCGTAAAGTAG--AAGTAGCTGCT-ATCTTCGATGGGACGGAAGATGAATCTG 254
consensus_7468#1      GTAGTTGGGCTCAGCTGATAAATCAACTCTGGATCACCGTTCCAGTATGTTTCACGCTCA 536
                       *  *  *  * *           *       *    *                      

consensus_7468#0      ---TGCAAAGCG-CACCAACTAACAGGTGGCATACA--A--TTGAACGCCCGCTAAA--- 407
consensus_7468#4      ---TGCAAAGCG-CACCAACTAACAGGTGGCATACA--A--TTGAACGCCCGCTAAA--- 197
consensus_7468#3      GC-TGCCAGGCT-GCCCATATTATTGACTACATCGT--ACGTTGCCTGCTCGCTGAAT-- 413
consensus_7468#2      GC-TGCCAGGCT-GCCCATATTATTGACTACATCGT--ACGTTGCCTGCTCGCTGAAT-- 308
consensus_7468#1      CCCTGCCGTGCTTATACATATGGCTGAACTGGCTATCGGCAGTGGATGCTATCTACGCCG 596
                         ***   **     **  *    *                **   **   **      

consensus_7468#0      GTATGCCTCTGAC---------------AC-TTTGCACACTATACCGGAAACTATT--AG 449
consensus_7468#4      GTATGCCTCCGAC---------------AC-TTTGCACACTATACCGGAAACTATT--AG 239
consensus_7468#3      GTCAGCACCGGGCTAACGGACATGACGTAC-TTTTCACCCTCAGTTAACACTTGCTTCAG 472
consensus_7468#2      GTCAGCACCGGGCTAACGGACATGACGTAC-TTTTCACCCTCAGTTAACACTTGCTTCAG 367
consensus_7468#1      AGCAGTATCGGTTCGGTTGTTTCGCGATACATTTTCGTGCATCATTGAAATGACGGCAGA 656
                          *   * *                 ** *** *   *         *          

consensus_7468#0      CACGCTCAGGTACATCGGCCCGGGCAGGGACTTTTGCAA--CGGGTTCATCCCAATCGAT 507
consensus_7468#4      GACGCTCAGGTACATCGGCCCGGGCACGGACTTTTGCAA--CGGGTTCATCCCAATCGAG 297
consensus_7468#3      GACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTT 532
consensus_7468#2      GACTCCCTGCTTCGCGAAGCTCAACACGAGCGTTTGTAGATCGGAGTTAAACATAGAGTT 427
consensus_7468#1      GGCACCGATCTTCGTAGGGCAGGTGTTTTGTTTTGTGAAGCTGAAAGTCATCCTTGACAC 716
                        * *     * *      *            **   *    *        *        

consensus_7468#0      CGGAAGTGCTTGTTGA---TGTAAAACACGCTATAACTGATCCGGAAGCTCATGTTGCAG 564
consensus_7468#4      CGGAAGTGACNCCTCG---TGCCGATTCTGCTGG-------------------------- 328
consensus_7468#3      CGGATTTGGTAGCACC---GGACGCGTG-------------------------------- 557
consensus_7468#2      CGGATTTGGTAGCACTCCTGGAAGCATTTGCTTGATCGAAACAAAGGGAAAATCGTCCAT 487
consensus_7468#1      CGGCTACATCTTCATAC--GATCGTTCATCTTCATCTTGATCGTGCTGATGAACAAGGAC 774
                      ***                                                         

consensus_7468#0      CAATTCGCC-AGTATAAAGCCAACCGGACCGAACCAATTGGTAAGCTGATAGGACAGCAA 623
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ATTTTCAAA-ATGCTGTCCGTACTGGTCACGCAGCACGTACTTGTCGTCAACCTTTTTGA 546
consensus_7468#1      ATTACCATATATGCTTTCGGAATTGCACAAATCACCAGTGCATGCACAATTATAGTCGGA 834
                                                                                  

consensus_7468#0      CAA----AAAGGTGACGGAGAAGAAAGCCATATAGTAGTTGTAGGTATCGAT----CTGT 675
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      GAT----CCTTCCGATACTGCAGCAGCTTCGGGATGTAAAAGTAGTAGAAGG----CATA 598
consensus_7468#1      AACTATGCCTTCTACTACTTTTACATCCCGAAGCTGCTGCAGTATCGGAAGGATCTCAAA 894
                                                                                  

consensus_7468#0      TTGGATGTGTTCGTGGCAAACATGTACCCCTCGGTGATGCCGTTCGGGGCAAGCAGAACG 735
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ATTTCCTGTGCCGATTCTG----------------------------------------- 617
consensus_7468#1      AAAGTTGACGACAAGTACGTGCTGCGTGACCAGTACGGACAGCATT-------------- 940
                                                                                  

consensus_7468#0      ATTTTTTAGGCTGTTCCAACGGAGCAGCTGCTCGGGCAGGCCACCTTCAACGAAATCTGC 795
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      TCCACCGTACAAAAGCAACACCGTGCCGGAGTAGCTCTGCGCAAACACGAACGCCAACAG 855
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      ACCGATCGACGTTACCGTTTTCATTACGTACGCAAGGACGTCCGATGCTTCCTGTACCAT 915
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      TTCGCGCTTCTGCTCCGCCCACCAGCGCCGAATCGCGTGCAATGGTTTGCGTAAAGTAGA 975
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      AGTAGCTGCTATCTTCGATGGGACGGAAGATGAATCTGGCTGCCAGGCTGCCCATATTAT 1035
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      TGACTACATCGTACGTTGCCTGCTCGCTGAATGTCAGCACCGGGCTAACGGACATGACGT 1095
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      ACTTTTCACCCTCCGTTAACACTTGCTTCAAGACTCCCTGCTTCGCGAAGCTCAACACGA 1155
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      GCGTTTGTAGATCGGAGTTAAACATAGAGTTCGGATTTGGTAGCACTCCTGGAAGCATTT 1215
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      GCTTGATCGAAACAAAGGGAAAATCCTCCATATTTTCAAAATGCTGTCCGTACTGGTCAC 1275
consensus_7468#4      ------------------------------------------------------------
consensus_7468#3      ------------------------------------------------------------
consensus_7468#2      ------------------------------------------------------------
consensus_7468#1      ------------------------------------------------------------
                                                                                  

consensus_7468#0      GCAGCACGTACTTGCGG 1292
consensus_7468#4      -----------------
consensus_7468#3      -----------------
consensus_7468#2      -----------------
consensus_7468#1      -----------------
                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)