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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7518#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1050 fasta sequence
[TTTGTAGTGAGAAAATTTATTCATCACAGTTAAGCGTGGTAGTGTATTGTACAGTTGACCTTGCGTTCTCTTACGAAGAACCGTGTGGAACGTGTTTGCTCCCGGTGTGGCTATCCGCGCCATACGAACACCACGTTTGCGATGGTGAACGCGTACAGTGCAATCATTTGTACCATCAGTGTAGTTTTCCGCCAGCGTGAAAACGATGCGTCCTTATTTACGTCCAATTCGCCTCCCTTCCGTCTGGTAAGATATTCGAGAACGTTGAAAGCTACATGGGCCAGCACGTGAATGCCCACTGCACCGGCAAGCAGGCCATACATCACCGAGGATATGTGGGCCGGTTCCAGTCCGATTCCCAGGAACATGTTCGTTACTGCCAGGATGTAGGCAGCATGGCCCAGGAGAGTGTGCAGGATTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCGAACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATCCCCGTACATCGACAAAAATGCACACGATGGCGGCGCATGTCAGTATCCAGCTGGCTATCATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCATGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAACTACCATGAGCGTACCGTGCAGTCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTGGTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATTGTGTGTATGTTTTCTTCTTCTGATCCTTCTGCTCTACACTAGACCTTCTCGGACCTTCTGCTGCTCCACACTGACGGACCGGTATGGTTTGTACAGCACTACACCACCGTCGGCAAGCCGAAACGGATCCACCACCTCCGGACCTCCTCTGCAAAACACACACACACACACACGTGCTCCCGTTCGTTCCCAACAGACGGTCGGCCCGGTTCG-CGAAGTGGGCGGACGCGTGGGCGG]
[+] EMBL CNS08PSP [TTTGTAGTGAGAAAATTTATTCATCACAGTTAAGCGTGGTAGTGTATTGTACAGTTGACCTTGCGTTCTCTTACGAAGAACCGTGTGGAACGTGTTTGCTCCCGGTGTGGCTATCCGCGCCATACGAACACCACGTTTGCGATGGTGAACGCGTACAGTGCAATCATTTGTACCATCAGTGTAGTTTTCCGCCAGCGTGAAGACGATGCGTCCTTATTTACGTCCAATTCGCCTCCCTTCCGTCTGGTAAGATATTCGAGAACGTTGAAAGCTACATGGGCCAGCACGTGAATGCCCACTGCACCGGCAAGCAGGCCATACATCACCGAGGATATGTGGGCCGGTTCCAGTCCGATTCCCAGGAACATGTTCGTTACTGCCAGGATGTAGGCAGCATGGCCCAGGAGAGTGTGCAGGATTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCGGACGTCGCCAGAACGACTATtg ]
[+] EMBL CNS08EWE [ gtacaAAAATGTATTCATCACAGTTAAGCGTGGTAGTGTATTGTACAGTTGACCTTGCGTTCTCTTACGAAGAACCGTGTGGAACGTGTTTGCTCCCAGTGTGGCTATCCGCGCCATACGAACACCACGTTTGCGATGGTGAACGCGTACAGTGCAATCATTTGTACCATCAGTGTAGTTTTCCGCCAGCGTGAAAACGATGCGTCCTTATTTACGTCCAATTCGCCTCCCTTCCGTCTGGTAAGATATTCGAGAACGTTGAAAGCTACATGGGCCAGCACGTGAATGCCCACTGCACCGGCAAGCAGGCCATACATCACCGAGGATATGTGGGCCGGTTCCAGTCCGATTCCCAGGAACATGTTCGTTACTGCCAGGATGTAGG AGCATGGCCCAGGAGAGTGTGCAGGATTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCGAACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATCCCCGTACATCGACAAAAATGCACACGATGGCGGCGCATGTCAGTATCCAGCTGGCTATCATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCATGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAACTACCATGAGCGTACCGTGCAGTCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTGGTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATTGTGTGTATGTTTTCTTCTTCTGATCCTTCTGCTCTACACTAGACCTTCTCGGACCTTCTGCTGCTCCACACTGACGGACCGGTATGGT ]
[-] EMBL CNS08EWD [ GAACACCACGTTTGCGATGGTGAACGCGTACAGTGCAATCATTTGTACCATCAGTGTAGTTTTCCGCCAGCGTGAAAACGATGCGTCCTTATTTACGTCCAATTCGCCTCCCTTCCGTCTGGTAAGATATTCGAGAACGTTGAAAGCTACATGGGCCAGCACGTGAATGCCCACTGCACCGGCAAGCAGGCCATACATCACCGAGGATATGTGGGCCGGTTCCAGTCCGATTCCCAGGAACATGTTCGTTACTGCCAGGATGTAGGCAGCATGGCCCAGGAGAGTGTGCAGGATTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCGAACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATCCCCGTACATCGACAAAAATGCACACGATGGCGGCGCATGTCAGTATCCAGCTGGCTATCATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCATGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAACTACCATGAGCGTACCGTGCAGTCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTGGTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATTGTGTGTATGTTTTCTTCTTCTGATCCTTCTGCTCTACACTAGACCTTCTCGGACCTTCTGCTGCTCCACACTGACGGACCGGTATGGTTTGTACAGCACTACACCACCGTCGGCAAGCCGAAACGGATCCACCA CTCCGGACCTCCTCTGCAAAACACACACACACACACACGTGCTCCCGTTCGTTCCCAACAGACGGTCGGCCC ]
[-] EMBL CNS08PSO [ GGGCCGGTTCCAGTCCGATTCCCAGGAACATGTTCGTTACTGCCAGGATGTAGGCAGCATGGCCCAGGAGAGTGTGCAGGTTTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCGGACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATCCCCGTACATCGACAAAAATGCACACGATGGCGGCGCATGTCAGTATCCAGCTGGCTATCATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCATGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAACTATCATGAGCGTACCGTGCAGTCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTGGTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATTGTGTGTATGTTTTCTTCTTCTGATCCTTCTGCTCTACACTAGACCTTCTCGGACCTTCTGCTGCTCCACACTGACGGACCGGTATGGTTTGTACAGCACTACACCACCGTCGGCAAGCCGAAACGGATCCACCACCTCCGGACCTCCTCTGCAAAACACACACACACACACACGTGCTCCCGTTCGTTCCCAACAGACGGTCGGCCCGGTTCG CGAA ]
[-] EMBL BM579791 [ CAGGATGTAGGCAGCATGGCCCAGGAGAGTGTGCAGGATTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCAAACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATCCCCGCACATCGACAAAAATGCACACAATGGCGGCGCATGTCAGTATCCAGCTGGCCATCATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCATGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAACTACCATGAGCGTACCGTGCAGCCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTGGTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATTGTGTGTATGTTTTCTTCTTCTGATCCTTCTGCTCTACACTAGACCTTCTCGGACCTTCTGCTGCTCCACACTGACGGACCGGTATGGTTTGTACAGCACTACACCACCGTCGGCAAGCCGAAACGGATCCACCACCTCCGGACCTCCTCTGCAAA ACACACACACACACACGTGCTCCCGTTCGTTCCCAACAGACGGTCGGCCCGGTCGGACG CGTGGGCGGACGCGTGGGCGG]
[-] EMBL BX623527 [ ATTAGTCCCAGGATGGGCTGGATGAACACGAGGGCGAACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATCCCAGTACATCGACAAAAATGCACACGATGGCGGCGCATGTCAGTATCCAGCTGGCTATCATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCATGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAACTACCATGAGCGTACCGTGCAGTCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTGGTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATNGTGTGTATGTTTTCTTCTTCTGATCCTTCTNCTATACACTAGACCTTCTNGGACCTTCTGNTGCTCCACACTGACGGACCGGTATGGTTTGTACAGCACTACACCACCGTCGGCAAGCCGAAACGGATCCACCACCTCCGGACCTCCTCTGCAAAACACACACACACACACACGTGCTCCCGTTCGTTCCCAACAGACGGTCGGC ]
consensusID : consensus_7518#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGATCGGGCGGACCGTGCACACAAGTTCCTATTGCCGAGGCGATGGTTAACTATCGCGATGAAGACTCTTGTCAAATATTTGTACCGTTTGTTAGTGACGTAAGAATTGGCTGTTTAGAAGGGCCGCAGGTGTCGCTTGATCTCGACGAATCGTTCACGTACGCTTCGCAGGGCAGTGCCGACCGGATGCTGTCCAGTTCGCCGCCCCAGAGCGGTCGCACCTCGCCGCCCGCTTCGCAAACACCGAGCGCCATCGCCCAGCTGCAGCAGAAAGATCTGCAGCAGCAGCAGCTGCTGCAGCAATCGTCCTCCTCGTCCTCCTCGCAGGTGCAGGAGTCGCTCGAGCTGCAGGTTGACTATTGGCCGCTGGCTCGGCCCAACTTCGACCCGAAGGAGAAATTGCTCGGCAAGGGCCAGGACCCGTCCGGCAAGAACAGTATTAAGAGCACGTTCCGGCATTTGCAGGTGTGGCGACTACCGCAAGCTCCAAGCTTTGGCGAGTTTACCAACGGCTTAACGCTGAGCTTTGCAACCAAGGAGAAAAAGCAAAAAATAATGAGATTAGGCAAAAAGAAGGAGAAAGATCGCGATGCTGAAAAAGGAGCAGTGCGTTCGAAGGGGTGGCCCGGTTA]
[+] EMBL BM593904 [CCGCCCACGCGTCCGCCCACGCGTCCGATCGGGCGGACCGTGCACACAAGTTCCTATTGCCGAGGCGATGGTTAACTATCGCGATGAAGACTCTTGTCAAATATTTGTACCGTTTGTTAGTGACGTAAGAATTGGCTGTTTAGAAGGGCCGCAGGTGTCGCTTGATCTCGACGAATCGTTCACGTACGCTTCGCAGGGCAGTGCCGACCGGATGCTGTCCAGTTCGCCGCCCCAGAGCGGTCGCACCTCGCCGCCCGCTTCGCAAACACCGAGCGCCATCGCCCAGCTGCAGCAGAAAGATCTGCAGCAGCAGCAGCTGCTGCAGCAATCGTCCTCCTCGTCCTCCTCGCAGGTGCAGGAGTCGCTCGAGCTGCAGGTTGACTATTGGCCGCTGGCTCGGCCCAACTTCGACCCGAAGGAGAAATTGCTCGGCAAGGGCCAGGACCCGTCCGGCAAGAACAGTATTAAGAGCACGTTCCGGCATTTGCAGGTGTGGCGACTACCGCAAGCTCCAAGCTTTGGCGAGTTTACCAACGGCTTAACGCTGAGCTTTGCAACCAAGGAGAAAAAGCAAAAAATAATGAGATTAGGCAAAAAGAAGGAGAAAGATCGCGATGCTGAAAAAGGAGCAGTGCGTTCGAAGGGGTGGCCCGGTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7518#0 TTTGTAGTGAGAAAATTTATTCATCACAGTTAAGCGTGGTAGTGTATTGTACAGTTGACC 60
consensus_7518#1 ------------------------------------------------------------
consensus_7518#0 TTGCGTTCTCTTACGAAGAACCGTGTGGAACGTGTTTGCTCCCGGTGTGGCTATCCGCGC 120
consensus_7518#1 ----------------CCGCCCACGCGTC-CGCCCACGCGTCCGATCGGGCGGACCGTGC 43
** * * ** ** *** * *** *** **
consensus_7518#0 -CATACGAAC--ACCACGTTTGCGATGGTGAACGCGTACAGTGCAATCATTTGT--ACCA 175
consensus_7518#1 ACACAAGTTCCTATTGCCGAGGCGATGGTTAACTATCGCGATGAAGACTCTTGTCAAATA 103
** * * * * * ******** *** * ** * * **** * *
consensus_7518#0 TCAGTGTAGTTTTCCGCCAGCGTGAAAACGATGCGTCCTTATTTACGTCCAATTCGCCTC 235
consensus_7518#1 TTTGTACCGTTTGTTAGTGACGTAAGAAT----TGGCTGTTTAGAAGGGCCGCAGGTGTC 159
* ** **** *** * ** * * * * * * * * **
consensus_7518#0 CCTTCCGTCTGGTAAGATATTCGAGAACGTTGAAAGCTACATGGGCCAGCACGTGAATGC 295
consensus_7518#1 GCTTGATCTCGACGAATCGTTCACGTAC-------GCTTCGCAGGGCAGTGC-CGACCGG 211
*** * * *** * ** *** * ** *** * ** *
consensus_7518#0 CCACTGCACCGGCAAGCAGGCCATACATCACCGAGGATATGTGGGCCGGTTCCAGTCCGA 355
consensus_7518#1 ATGCTGTCC-----AGTTCGCCGC------CCCAGAGCGGTCGCACC--TCGCCGCCCGC 258
*** * ** *** ** ** * ** * * * ***
consensus_7518#0 TTCCCAGGAACATGTTCGTTACTGCCAGGATGTAGGCAGCATGGCCCAGGAGAGTGTGCA 415
consensus_7518#1 TTCGCAAACAC-CGAGCGCCATCGCCCAGCTGCAG-----------CAGAAAGATCTGCA 306
*** ** ** * ** * *** * ** ** *** * * ****
consensus_7518#0 GGATTCTAATCGCGGACTGTGCCGGCTGCTGGCTCGGTCTCATTAGTCCCAGGATGGGCT 475
consensus_7518#1 GCAGC--AGCAGCTG-CTGCAGCAATCGTCCTCCTCGTCCTCCTCGCAGGTGCAGGAGTC 363
* * * ** * *** * * * *** * * * * * *
consensus_7518#0 GGATGAACACGAGGGCGAACGTCGCCAGACCGACGATGCTGTGCGCGTGTGCCTCAAATC 535
consensus_7518#1 GCTCGAGCTGCAGGTTGACTATTG----GCCGCTGGCTCGGCCCAACTTCGACCCGAAGG 419
* ** * *** ** * * *** * * * * * * * * **
consensus_7518#0 CCCGTACA-TCGACAAAAATGCACACGATGGCGGCGCATGTCAGTATCCAGCTGGCTATC 594
consensus_7518#1 AGAAATTGCTCGGCAAGGGCCAGGACCCGTCCGGCA-AGAACAGTATTAAGAGCACGTTC 478
*** *** ** **** * ****** ** * **
consensus_7518#0 ATGTAAATCCGATGGTAAAAATTCCACACCGGCACTCCAAAGTACCGACGGGTGGTCCA- 653
consensus_7518#1 CGGCATTTGCAGGTGTGGCGACT----ACCGCAAGCTCCAAGCTTTGGCGAGTTTACCAA 534
* * * * ** * * **** * * *** * ** ** ***
consensus_7518#0 TGTTGTTTTGAAATACCTTGCAACGGTGTTTCCGAGGGAATTGAAGAACAGCCAAGCAAC 713
consensus_7518#1 CGGCTTAACGCTGAGCTTTGCAACCAAGG----AGAAAAAGCAAAAAATAATGAGATTA- 589
* * * * ******* * ** ** ** * * *
consensus_7518#0 TACCATGAGCGTACCGTGCAGTCGCAACAGCACCGAGGGATGGTCATGGTCGTGGTCGTG 773
consensus_7518#1 -GGCAAAAAGAAGGAGAAAGATCGCGATGCTGAAAAAGGAGCAGTGCGTTCGAAGGGGTG 648
** * * **** * * *** * *** * ***
consensus_7518#0 GTCGTCGTCATGGTCGTGATCGTGTTCGTGATCTGTCATTGTGTGTATGTTTTCTTCTTC 833
consensus_7518#1 GCC-CGGTTA-------------------------------------------------- 657
* * ** *
consensus_7518#0 TGATCCTTCTGCTCTACACTAGACCTTCTCGGACCTTCTGCTGCTCCACACTGACGGACC 893
consensus_7518#1 ------------------------------------------------------------
consensus_7518#0 GGTATGGTTTGTACAGCACTACACCACCGTCGGCAAGCCGAAACGGATCCACCACCTCCG 953
consensus_7518#1 ------------------------------------------------------------
consensus_7518#0 GACCTCCTCTGCAAAACACACACACACACACACGTGCTCCCGTTCGTTCCCAACAGACGG 1013
consensus_7518#1 ------------------------------------------------------------
consensus_7518#0 TCGGCCCGGTTCGCGAAGTGGGCGGACGCGTGGGCGG 1050
consensus_7518#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||