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Anopheles gambiae
cluster # 7553 cluster # 7553       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7553#0 length = 1190 sequences # 3  
consensus_7553#1 length = 934 sequences # 2  
consensus_7553#2 length = 771 sequences # 2  

consensusID : consensus_7553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1190
fasta sequence
                              [CCGGCGGTCAATCCGGACCGGCTGTACGATCTGATGGCGGTGGTCATACACTGCGGCTCGGGCCCCAACCGTGGCCATTACATTAGCATCGTCAAAAGTCACGGTTTCTGGCTGTTGTTTGACGACGATATGGTTGATAAAATTGAAGCTTCCACCATCGAGGACTTTTACGGGTTGACATCGGACATACAAAAGTCTTCGGAAACGGGTTACATTCTGTTCTACCAGTCGCGGGATTGTGCGTAGAAAAAGCCAGCCGTTTGCTGCTCACAGTTTGTGGCAGCTCCTTGGTAACCGTTGGTAACATGCCCCCTTGGTATTAGCATGCCGGACGGTTTGCGCGAGCATGTGGAGCGCGAACGCTTTCACACGCAGCAGTTAGTGGTTATGTTAGTGAATTTAATTTTGTTTATTTATTTATTGTGTAGCAGATGTGTAATATATCATTATATTATGTAGTGTCGAGCACGGGCAAGCGAAGGCAAAAGAGAATGTACAAAGCTGTGGGG-AAAGGTAGAGAAGGCGGAGCGTATCGA-GGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTTGGCCCGGGCTTCGGGACGAGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTATTGCTTAAC-GGGAAAGGAG-AGGAATTTAGCAAGTAGGACGCAA-GAGCAAGCTCTATTCTTTCTGTGTAGGGAGGAGGCCCGTACAATAC-GAGCGTAGTAAT-CAAACCTATTCTTTTTGCGCTACA-GGACAGCGCGGAAC-GATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTTAACTCGTTTCT-GGGACC-ATGGTTGTCATGGTAACTGTGTGAAAACAAGGACATCCTCAGCAGCTGTAGCGCCTGAACCGTGTTAAGAGAAGGATAAGCAGCACACAGGAGAATGTAGCATCGATTTGGAATCGAACAAAAATACATTACTACCAAACATGATACATTTTCTTTACACTAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAGCTGCAGGAAGGGAAAACTCCACTTCGAACTAGAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGCATCTTGCCTAGCGGACGANGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCC]

[+] EMBL BM588917             [CCGGCGGTCAATCCGGACCGGCTGTACGATCTGATGGCGGTGGTCATACACTGCGGCTCGGGCCCCAACCGTGGCCATTACATTAGCATCGTCAAAAGTCACGGTTTCTGGCTGTTGTTTGACGACGATATGGTTGATAAAATTGAAGCTTCCACCATCGAGGACTTTTACGGGTTGACATCGGACATACAAAAGTCTTCGGAAACGGGTTACATTCTGTTCTACCAGTCGCGGGATTGTGCGTAGAAAAAGCCAGCCGTTTGCTGCTCACAGTTTGTGGCAGCTCCTTGGTAACCGTTGGTAACATGCCCCCTTGGTATTAGCATGCCGGACGGTTTGCGCGAGCATGTGGAGCGCGAACGCTTTCACACGCAGCAGTTAGTGGTTATGTTAGTGAATTTAATTTTGTTTATTTATTTATTGTGTAGCAGATGTGTAATATATCATTATATTATGTAGTGTCGAGCACGGGCAAGCGAAGGCGAAAGAGAATGTACAAAGCTGTGGGGAAAAGGTAGAGAAGGCGGAGCGTATCGA GGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTCGGCCCGGGCTTCGGagc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX621312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGCACGGGCAAGCGAAGGCAAAAGAGAATGTACAAAGCTGTGGGG AAAGGTAGAGAAGGCGGAGCGTATCGA GGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTTGGCCCGGGCTTC GGA GAGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTATTGCTTAAC GGGAAAGGAG AGGAATTTAGCAAGTAGGACGCAA GAGCAAGCTCTATTCTTTCTGTGTAGGGAGGAGGCCCGTACAATAC GAGCGTAGTAAT CAAACCTATTCTTTTTGCGCTACA GGACAGCGCGGAAC GATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTTAACTCGTTTCT GGGACC ATGGTTGTCATGGTAACTGTGTGAAAACAAGGACATCCTCAGCAGCTGTAGCGCCTGAACCGTGTTAAGAGAAGGATAAGCAGCACACAGGAGAATGTAGCATCGATTTGGAATCGAACAAAAATACATTACTACCAAACATGATACATTTTCTTTACACTAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAGCTGCAGGAAGGGAAAACTCCACTTCGAACTAGAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGCATCTTGCCTAGCGGACGANGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCC]
[+] EMBL BX619807             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGCACGGGCAAGCGAAGGCAAAAGAGAATGTACAAAGCTGTGGGG AAAGGTAGAGAAGGCGGAGCGTATCGAGGGANNCAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTTGGCCCGGGCTTCGGGAGGAGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGNTTCTTATTGTTATTGCTTAACGGGGAAAGGNGNAGGAATTTAGCAAGTAGNNCGCAAGGAGCAAGCTCTATTCTTTCTGTGTAGGGAGGAGGCCCGTACAATACGGAGCGTAGTAATCCAAACCTATTCTTTTTGCGCTACAGGGACAGCGCGGAACGGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTTAACTCGTTTCTGGGGACCNATGGNTGTCATGGTAACTGTGT                                                                                                                                                                                                                                                                                                                       ]


>consensus_7553#0 CCGGCGGTCAATCCGGACCGGCTGTACGATCTGATGGCGGTGGTCATACACTGCGGCTCG GGCCCCAACCGTGGCCATTACATTAGCATCGTCAAAAGTCACGGTTTCTGGCTGTTGTTT GACGACGATATGGTTGATAAAATTGAAGCTTCCACCATCGAGGACTTTTACGGGTTGACA TCGGACATACAAAAGTCTTCGGAAACGGGTTACATTCTGTTCTACCAGTCGCGGGATTGT GCGTAGAAAAAGCCAGCCGTTTGCTGCTCACAGTTTGTGGCAGCTCCTTGGTAACCGTTG GTAACATGCCCCCTTGGTATTAGCATGCCGGACGGTTTGCGCGAGCATGTGGAGCGCGAA CGCTTTCACACGCAGCAGTTAGTGGTTATGTTAGTGAATTTAATTTTGTTTATTTATTTA TTGTGTAGCAGATGTGTAATATATCATTATATTATGTAGTGTCGAGCACGGGCAAGCGAA GGCAAAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAGGCGGAGCGTATCGAGGAG ACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTTGGCCCGGGCTTCGGGACGAGCTTAAC GTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTATTGCTTAACGGGAAAGG AGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTTCTGTGTAGGGAGGAGG CCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGCTACAGGACAGCGCGGA ACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTT AACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAACAAGGACATCCTCAGC AGCTGTAGCGCCTGAACCGTGTTAAGAGAAGGATAAGCAGCACACAGGAGAATGTAGCAT CGATTTGGAATCGAACAAAAATACATTACTACCAAACATGATACATTTTCTTTACACTAA GGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAGCTGCAGGAAGGGAAAA CTCCACTTCGAACTAGAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGCATCTTG CCTAGCGGACGANGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCC



consensusID : consensus_7553#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 934
fasta sequence
                              [TGCGTGCGAAAAAAGAAAAACACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGCTCCAGGATCCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTTACTGGAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAGGCGGA-CGTAATCGAGGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTCGGCCCGGGCTTCGGAGCGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTATTGCTTAACGGGAAAGGAGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTTCTGTGTAGCGAGGAGGCCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGCTACAGAACAGCGCGGAACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTTAACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAACAAGGCCATCCTCAGCAGCTGTAGCGCCTGAACCGTGTTAAAAGAAGGTTAAGCAGGACACAGGAGAGTGTAGGATCGATTTGGAATCGAGCAAAAATACATTACTACCAAACATGATACATTTTCTTTACACTAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAGCTACAGAAAGGGAAAACTCCACTTTGAACTATAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGCATCTTGCCTAGTGGTTTTTGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCCAATAATGATAGGAACACTTCTAATAAAATGGTAACAAGTACCAACCAACTGTTCAAAAAAAAAAAAAAAAAAAAATAAAAAAAAGGCA]

[+] EMBL CNS09I0I             [TGCGTGCGAAAAAAGAAAAACACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGCTCCAGGATCCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTTACTGGAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAGGCGGA CGTAATCGAGGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTCGGCCCGGGCTTCGGAGCGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTATTGCTTAACGGGAAAGGAGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTTCTGTGTAGCGAGGAGGCCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGCTACAGAACAGCGCGGAACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTTAACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAACAAGGCCATCCTCAGCAGCTGTAGCGCCTGAACCGTGTTAAAAGAAGGTTAAGCAGGACACAGGAGAGTGTAGGATCGATTTGGAATCGAGCAAAAATACATTACTACCAAACATGATACATTTTCTTTACACTAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAGCTACAGAAAGGGAAAACTCCACTTTGAACTATAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGCATCTTGCCTAGTGGTTTTTGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCCAATAATGATAGGAACACTTCTAATAAAATGGTAACAAGTACCAACCAACTGTTCAAAAAAAAAAAAAAAAAAAAATAAAAAAAAGGCA]
[-] EMBL CNS09I0J             [                         ATTAGGCTGGACAGAACAGGCTTGCTTTTGAAAAAACGGCTTCCCGTGTGCTCCAGGATCCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTTACTGGAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAGGCGGAGCGT ATCGAGGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTCGGCCCGGGCTTCGGAGCGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTATTGCTTAACGGGAAAGGAGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTTCTGTGTAGCGAGGAGGCCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGCTACAGAACAGCGCGGAACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGTTTAACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAACAAGGCCATCCTCAGCAGCTGTAGCGCCTGAACCGTGTTAAAAGAAGGTTAAGCAGGACACAGGAGAGTGTAGGATCGATTTGGAATCGAGCAAAAATACATTACTACCAAACATGATACATTTTCTTTACACTAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAGCTACAGAAAGGGAAAACTCCACTTTGAACTATAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGCATCTTGCCTAGTGGACGAGGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCCAATAATGATAGGAACACTTCTAATAAAATGGTAACAAGTACCAACCAACTGTTCAAAAAAAAAA                        ]


>consensus_7553#1 TGCGTGCGAAAAAAGAAAAACACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAA TCGGCTTCCCGTGTGCTCCAGGATCCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGT GTTTTAATGGTGCATCTTACTGGAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAG GCGGACGTAATCGAGGAGACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTCGGCCCGGG CTTCGGAGCGCTTAACGTTTCGCTCAGTTGTATGAATTTTAATGTGATTCTTATTGTTAT TGCTTAACGGGAAAGGAGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTT CTGTGTAGCGAGGAGGCCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGC TACAGAACAGCGCGGAACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCC GTAAACAATCAAGTTTAACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAA CAAGGCCATCCTCAGCAGCTGTAGCGCCTGAACCGTGTTAAAAGAAGGTTAAGCAGGACA CAGGAGAGTGTAGGATCGATTTGGAATCGAGCAAAAATACATTACTACCAAACATGATAC ATTTTCTTTACACTAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGAGAAGGAGAAAG CTACAGAAAGGGAAAACTCCACTTTGAACTATAAACTCTGTGCAGAGAAGGTGAAGAAGG AATGATGCGCATCTTGCCTAGTGGTTTTTGGGAGAAGAAACAGTTCCGCCAAGTGTGGAA AATGCCAATAATGATAGGAACACTTCTAATAAAATGGTAACAAGTACCAACCAACTGTTC AAAAAAAAAAAAAAAAAAAAATAAAAAAAAGGCA



consensusID : consensus_7553#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 771
fasta sequence
                              [CCGGAAAGGCGCTGGAAATTTCCTCTGGCAAACTGTTTGCGTGCGAAAAAGGAAAACACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGCTCCTGGATTCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTTACTGGAAGAGGATGGGTGCCAACATTTCCCAACTCGAGCGTGACATCGGGTCAGACCAGTTCCCTCCGAACGAGCATTACTTCGGACTGGTCAATTTCGGCAACACCTGCTACAGCAACTCGGTCCTGCAGGCGCTCTACTTCTGCCGCCCGTTCCGGGAGAAGGTGCTAGAGTACAAGGCGAAAAACCGGCGCACGAAGGAGACGCTCCTCTCCTGCCTGGCTGACCTGTTCTACAGTATCGCGACGCAGAAGAAGAAGGTCGGCTCGATAGCGCCGAAAAAGTTCATCGCCCGGCTGCGCAAGGAGAAGGAAGAGTTCGACAACTACATGCAGCAGGATGCGCACGAGTTCCTTAACTTTCTCATCAACCACATCAACGAAATTATACTCGCGGAGCGCAACCAGGCAAAAGCAGGGAGTGGTAGCGGTGGTGGTGGTGGCAGTGCCGGCGGCAAAGGCAGCAGTGGCAACGGGATGGCGAACGGCACTGGCACAGCGGCGAACGGGCCGGACCTGAACGGTGGCCTCAACGGGGGCAATGGCGGCGGCAGCAACAGCGGCAACACCGAGCCGACCTGGGTGCACGAAATCTTCC]

[+] EMBL BM606282             [CCGGAAAGGCGCTGGAAATTTCCTCTGGCAAACTGTTTGCGTGCGAAAAAGGAAAACACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGCTCCTGGATTCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTTACTGGAAGAGGATGGGTGCCAACATTTCCCAACTCGAGCGTGACATCGGGTCAGACCAGTTCCCTCCGAACGAGCATTACTTCGGACTGGTCAATTTCGGCAACACCTGCTACAGCAACTCGGTCCTGCAGGCGCTCTACTTCTGCCGCCCGTTCCGGGAGAAGGTGCTAGAGTACAAGGCGAAAAACCGGCGCACGAAGGAGACGCTCCTCTCCTGCCTGGCTGACCTGTTCTACAGTATCGCGACGCAGAAGAAGAAGGTCGGCTCGATAGCGCCGAAAAAGTTCATCGCCCGGCTGCGCAAGGAGAAGGAAGAGTTCGACAACTACATGCAGCAGGATGCGCACGAGTTCCTTAACTTTCTCATCAACCACATCAACGAAATTATACTCGCGGAGCGCAACCAGGCAAAAGCAGGG                                                                                                                                                                                  ]
[+] EMBL BM610959             [                                                                                                                                                         ccgGTTTTAATGGTGCATCTTACTGGAAGAGGATGGGTGCCAACATTTCCCAACTCGAGCGTGACATCGGGTCAGACCAGTTCCCTCCGAACGAGCATTACTTCGGACTGGTCAATTTCGGCAACACCTGCTACAGCAACTCGGTCCTGCAGGCGCTCTACTTCTGCCGCCCGTTCCGGGAGAAGGTGCTAGAGTACAAGGCGAAGAACCGGCGCACGAAGGAGACGCTCCTCTCCTGCCTGGCCGACCTGTTCTACAGTATCGCGACGCAGAAGAAGAAGGTCGGCTCGATAGCGCCGAAAAAGTTCATCGCCCGGCTGCGCAAGGAGAAGGAAGAGTTTGACAACTACATGCAGCAGGATGCGCACGAGTTCCTTAACTTTCTCATCAACCACATCAACGAAATTATACTCGCGGAACGCAACCAGGCAAAGGCAGGGAGTGGTAGCGGTGGTGGTGGTGGCAGTGCCGGCGGCAAAGGCAGCAGTGGCAACGGGATGGCGAACGGCACTGGCACAGCGGCGAACGGGCCGGACCTGAACGGTGGCCTCAACGGGGGCAATGGCGGCGGCAGCAACAGCGGCAACACCGAGCCGACCTGGGTGCACGAAATCTTCC]


>consensus_7553#2 CCGGAAAGGCGCTGGAAATTTCCTCTGGCAAACTGTTTGCGTGCGAAAAAGGAAAACACA TATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGCTCCTGGAT TCTCTTGACGTGACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTTACTGGA AGAGGATGGGTGCCAACATTTCCCAACTCGAGCGTGACATCGGGTCAGACCAGTTCCCTC CGAACGAGCATTACTTCGGACTGGTCAATTTCGGCAACACCTGCTACAGCAACTCGGTCC TGCAGGCGCTCTACTTCTGCCGCCCGTTCCGGGAGAAGGTGCTAGAGTACAAGGCGAAAA ACCGGCGCACGAAGGAGACGCTCCTCTCCTGCCTGGCTGACCTGTTCTACAGTATCGCGA CGCAGAAGAAGAAGGTCGGCTCGATAGCGCCGAAAAAGTTCATCGCCCGGCTGCGCAAGG AGAAGGAAGAGTTCGACAACTACATGCAGCAGGATGCGCACGAGTTCCTTAACTTTCTCA TCAACCACATCAACGAAATTATACTCGCGGAGCGCAACCAGGCAAAAGCAGGGAGTGGTA GCGGTGGTGGTGGTGGCAGTGCCGGCGGCAAAGGCAGCAGTGGCAACGGGATGGCGAACG GCACTGGCACAGCGGCGAACGGGCCGGACCTGAACGGTGGCCTCAACGGGGGCAATGGCG GCGGCAGCAACAGCGGCAACACCGAGCCGACCTGGGTGCACGAAATCTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7553#0      CCGGCGGTCAATCCGGACCGGCTGTACGATCTGATGGCGGTGGTCATACACTGCGGCTCG 60
consensus_7553#1      ------------------------------------------------------------
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      GGCCCCAACCGTGGCCATTACATTAGCATCGTCAAAAGTCACGGTTTCTGGCTGTTGTTT 120
consensus_7553#1      ------------------------------------------------------------
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      GACGACGATATGGTTGATAAAATTGAAGCTTCCACCATCGAGGACTTTTACGGGTTGACA 180
consensus_7553#1      ------------------------------------------------------------
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      TCGGACATACAAAAGTCTTCGGAAACGGGTTACATTCTGTTCTACCAGTCGCGGGATTGT 240
consensus_7553#1      ------------------------------------------------------------
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      GCGTAGAAAAAGCCAGCCGTTTGCTGCTCACAGTTTGTGGCAGCTCCTTGGTAACCGTTG 300
consensus_7553#1      ------------------------------------------------------------
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      GTAACATGCCCCCTTGGTATTAGCATGCCGGACGGTTTGCGCGAGCATGTGGAGCGCGAA 360
consensus_7553#1      ---------------------------------------TGCGTGCGAAAAAAGAAAAAC 21
consensus_7553#2      --CCGGAAAGGCGCTGGAAATTTCCTCTGGCAAACTGTTTGCGTGCGAA-AAAGGAAAAC 57
                                                              *** **      **    * 

consensus_7553#0      CGCTTTCACACGCAGCAGTTAGTGGTTATGTTAGTGAATTTAATTTTGTTTATTTATTTA 420
consensus_7553#1      ACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGC-TCCA 80
consensus_7553#2      ACATATTAAGCTGGACAGAACAGGCTTGCTTTTGTTGAATCGGCTTCCCGTGTGC-TCCT 116
                         * * *  *    ***     * **   ** **  * *    **    * *   *   

consensus_7553#0      TTGTGTAGCAGATGTGTAATATATCATTATATTATGTAGTGTCGAGCACGGGCAAGCGAA 480
consensus_7553#1      GGATCCTCTTGACGTG--ACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTT 138
consensus_7553#2      GGATTCTCTTGACGTG--ACGTGCCTGCAGCAAGAATAGGGTGTTTTAATGGTGCATCTT 174
                         *      ** ***  *  *  *   *       *** **     *  **        

consensus_7553#0      GGCAAAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAGGCGGAGCGTATCGAGGAG 540
consensus_7553#1      ACTGGAAGAGAATGTACAAAGCTGTGGGGAAAGGTAGAGAAGGCGGACGTAATCGAGGAG 198
consensus_7553#2      ACTGGAAGAGGATGGGT---------GCCAACATTTCCCAACTCGAGCGTGA-CATCGGG 224
                           ***** ***            *  **   *    **  **      * *   * *

consensus_7553#0      ACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTTGGCCCGGGCTTCGGGACGAGCTTAAC 600
consensus_7553#1      ACAGTGCGCTTGCGGCTTCTCTTTGCGCATCGTCGGCCCGGGCTTCGGAGCG--CTTAAC 256
consensus_7553#2      TCAGACCAGTTCC-----CTCCGAACG-AGCATTACTTCGGACTGGTCAATTTCGGCAAC 278
                       ***  *  ** *     ***    ** * * *     *** **             ***

consensus_7553#0      GTTTCGCTCAGTTGTATGAATTTTAATGTGATT--CTTATTGTTATTGCTTAACGGGAAA 658
consensus_7553#1      GTTTCGCTCAGTTGTATGAATTTTAATGTGATT--CTTATTGTTATTGCTTAACGGGAAA 314
consensus_7553#2      ACCTGCTACAGCAACTCGGTCCTGCAGGCGCTCTACTTCTGCCGCCCGTTCCGGGAGAAG 338
                         *    ***      *    *  * * * *   *** *       * *    * *** 

consensus_7553#0      GGAGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTTCTGTGTAGGGAGGA 718
consensus_7553#1      GGAGAGGAATTTAGCAAGTAGGACGCAAGAGCAAGCTCTATTCTTTCTGTGTAGCGAGGA 374
consensus_7553#2      GTGCTAGAGTACAAGGCGAAAAACCGGCGCACGAAGGAGACGCTCCTCTCCTGCCTGGCT 398
                      *     ** *  *    * *  **    *  * *     *  **       *     *  

consensus_7553#0      GGCCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGCTACAGGACAGCGCG 778
consensus_7553#1      GGCCCGTACAATACGAGCGTAGTAATCAAACCTATTCTTTTTGCGCTACAGAACAGCGCG 434
consensus_7553#2      GACCTGTTCTACAGTATCGCGACG--CAGAAGAAGAAGGTCGGCTCGATAGCGCCGAAAA 456
                      * ** ** * * *  * **       ** *   *     *  ** * * **  * *    

consensus_7553#0      GAACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGT 838
consensus_7553#1      GAACGATGGCTCAGCCATCGAAGGAATCGCTGGGTTTTGTTTTTCCGTAAACAATCAAGT 494
consensus_7553#2      AGTTCATCGCCCGGCTGCGCAAGGAGAAGGAAGAGTTCGACAA-CTACATGCAG-CAGGA 514
                           ** ** * **     *****   *   *  ** *     *   *  **  ** * 

consensus_7553#0      TTAACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAACAAGGACATCCTCA 898
consensus_7553#1      TTAACTCGTTTCTGGGACCATGGTTGTCATGGTAACTGTGTGAAAACAAGGCCATCCTCA 554
consensus_7553#2      TGCGCACGAGTT-----CCTTAACTTTCTCATCAACCACATCA--ACGAAATTATACTCG 567
                      *   * **  *      ** *   * **     ***    * *  ** *    ** *** 

consensus_7553#0      GCAGCTGTAGCGCCTGAACCGTGTTAAGAGAAGGATAAGCAG-CACACAGGAGAATGTAG 957
consensus_7553#1      GCAGCTGTAGCGCCTGAACCGTGTTAAAAGAAGGTTAAGCAG-GACACAGGAGAGTGTAG 613
consensus_7553#2      -----CGGAGCGC---AACCAGGCAAAAGCAGGGAGTGGTAGCGGTGGTGGTGGTGGCAG 619
                            * *****   ****  *  **   * **    * **       ** *   * **

consensus_7553#0      CATCGATTTGGAATCGAACAAAAATACATTACTACCAAACATGATACATTTTCTTTACAC 1017
consensus_7553#1      GATCGATTTGGAATCGAGCAAAAATACATTACTACCAAACATGATACATTTTCTTTACAC 673
consensus_7553#2      TGCCGGCGGCAAAGGCAGCAGTGGCAACGGGATGGCGAACGGCACTGGCACAGCGGCGAA 679
                         **      **   * **     *      *  * ***   *              * 

consensus_7553#0      TAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGA-GAAGGAGAAAGCTGCAGGAAGGG 1076
consensus_7553#1      TAAGGCACCGTTAGATGAAGACGAAGACGAAGAAGA-GAAGGAGAAAGCTACAGAAAGGG 732
consensus_7553#2      CGGGCCGGACCTGAACGGTGGCCTCAACGGGGGCAATGGCGGCGGCAGCAACAGCGGCAA 739
                         * *     *  * *  * *    ***  *   * *  ** *  ***  ***      

consensus_7553#0      AA--AACTCCACTTCGAACTAGAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGC 1134
consensus_7553#1      AA--AACTCCACTTTGAACTATAAACTCTGTGCAGAGAAGGTGAAGAAGGAATGATGCGC 790
consensus_7553#2      CACCGAGCCGACCTGGGTGCACGAAATCTTCC---------------------------- 771
                       *   *  * ** * *    *  ** ***                               

consensus_7553#0      ATCTTGCCTAGCGGACGANGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCC---- 1190
consensus_7553#1      ATCTTGCCTAGTGGTTTTTGGGAGAAGAAACAGTTCCGCCAAGTGTGGAAAATGCCAATA 850
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      ------------------------------------------------------------
consensus_7553#1      ATGATAGGAACACTTCTAATAAAATGGTAACAAGTACCAACCAACTGTTCAAAAAAAAAA 910
consensus_7553#2      ------------------------------------------------------------
                                                                                  

consensus_7553#0      ------------------------
consensus_7553#1      AAAAAAAAAAATAAAAAAAAGGCA 934
consensus_7553#2      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)