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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7591#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 758 fasta sequence
[GCGCAACATGCCTGNCTTTTTGTTGTTANTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTATGGGGAAGCAGCTCCTTCCCCTGTGTTTTCGCTGTAAGCAAGAAATTGTACTGCAGGATTATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTGAAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGGATTTATTAGCTAAGTACAATCGTTAGTAGAAGCGGCGAGCGGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGGTTGAATTTGCAACAAAAGCGACACAAATATCGTGAGTGTGTTGATTGATCGTGTTTAGCTGAAGGGAAAGCGAATGATAGGGGAGAAAAGTACACAACGTAGTACATACGTAAACACAGCAAATGTTGTTAAGGCTGGCGCGTGTGCGCGTTTGTGTTGCAACATACGAGCTCTAACGAAAAGAGGAAACAAAAAAACGGGACAAAATCAGTAATAAATATAGTTTGAAAGTGACAATGAAAAGCAAAAAACGCGAAGGGTTGTGGAGTAAAAAAAAATAGTCCCAAAACGGTCATTGCAGATTGCAGATCGCGTTGCTTACGGCAATTTTGCTCTACCCTTATTTGTAGCAACAATTTCCGCATTTCCGCACACATTCCGCATTAGCAGCTGCCCTATTTTGCCTTCTCTCTCGTGTGTTGCATTTTGGTTTGCTGATTAAGG]
[+] EMBL BX466892 [GCGCAACATGCCTGNCTTTTTGTTGTTANTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTATGGGGAAGCAGCTCCTTCCCCTGTGTTTTCGCTGTAAGCAAGAAATTGTACTGCAGGATTATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTGAAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGGATTTATTAGCTAAGTACAATCGTTAGTAGAAGCGGCGAGCGGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGGTTGAATTTGCAACAAAAGCGACACAAATATCGTGAGTGTGTTGATTGATCGTGTTTAGCTGAAGGGAAAGCGAATGATAGGGGAGAAAAGTACACAACGTAGTACATACGTAAACACAGCAAATGTTGTTAAGGCTGGCGCGTGTGCGCGTTTGTGTTGCAACATA ]
[-] EMBL AGA283029 [ TTTAGCTGAAGGGAAAGCGAATGATAGGGGAGAAAAGTACACAACGTAGTACATACGTAAACACAGCAAATGTTGTTA ]
[+] EMBL BX610776 [ AGCTGAAGGGAAAGCGAATGATAGGGGAGAAAAGTACACAACGTAGTACATACGTAAACACAGCAAATGTTGTTAAGGCTGGCGCGTGTGCGCGTTTGTGTTGCAACAAACGAGCTCTAACGAAAAGAGGAAACAAAAAAACGGGACAAAATCAGTAATAAATATAGTTTGAAAGTGACAATGAAAAGCAAAAAACGCGAAGGGTTGTGGAGTAAAAAAAAATAGTCCCAAAACGGTCATTGCAGATTGCAGATCGCGTTGCTTACGGCAATTTTGCTCTACCCTTATTTGTAGCAACAATTTCCGCATTTCCGCACACATTCCGCATTAGCAGCTGCCCTATTTTGCCTTCTCTCTCGTGTGTTGCATTTTGGTTTGCTGATTAAGG]
[+] EMBL BX625193 [ CAGATTGCATATCGCGTTGCTTACGGCNATTTTGCTCTACCCTTATTTGTNGCAACAATTTCCGCATTTCCGCACCCGTTCCGCA ]
consensusID : consensus_7591#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 726 fasta sequence
[GTGTGTTTGCACGTGCTACGAGGAACCTAGAACCCTTGGAGAACTAGCTGCATACGATGCACGCCAGGGTGCAACGCTACTATACCTAAATCCCCAGTTTCTCTTACCCGTTTAGTTAAATAGTGCAGAGGAAAACGGAACGGATTGATGATAGATTTAACCAGCAAAGAGTAGGGATGGCTTCGNAAAGGATCGGACCGGACGAACGGATGTACCAGCTCCGCACCAGGGGTATAGATTGTTTTCTTTATTTCCTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTATGGGGAAGCAGCTCCTTCCCCTGTGTTTTGCTGTAAGAAGAAATTGTACTGCAGGATTATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTGAAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGGATTTATTAGCTAAGTAAATCGTTAGTAGAAGCGGCGAGCGGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGGTTGAATTTGCAACAAANGCGACACAAATATCGTGAGTGTGTTGATTGATCGTGTTTAGCTGAAGGGAAAGCNAATGATAGGGGAGAAAAGTACACGACGTAGTACATACGTAAACACAGCAAATCATCCAACACAACCAAATGTTGTTAAGGCTGGCGCGTAAGCGTTTGTGTTGCAACAAACGAGCCC]
[+] EMBL BX625416 [GTGTGTTTGCACGTGCTACGAGGAACCTAGAACCCTTGGAGAACTAGCTGCATACGATGCACGCCAGGGTGCAACGCTACTATACCTAAATCCCCAGTTTCTCTTACCCGTTTAGTTAAATAGTGCAGAGGAAAACGGAACGGATTGATGATAGATTTAACCAGCAAAGAGTAGGGATGGCTTCGNAAAGGATCGGACCGGACGAACGGATGTACCAGCTCCGCACCAGGGGTATAGATTGTTTTCTTTATTTCCTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTATGGGGAAGCAGCTCCTTCCCCTGTGTTTTGCTGTAAGAAGAAATTGTACTGCAGGATTATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTGAAACTGAAATCAAACACACAGCGCAAAAGCTAGAGATAAGGATTTATTAGCTAAGTAAATCGTTAGTAGAAGCGGCGAGCGGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGGTTGAATTTGCAACAAANGCGACACAAATATCGTGAGTGTGTTGATTGATCGTGTTTAGCTGAAGGGAAAGCNAATGATAGGGGAGAAAAGTACACGACGTAG ]
[+] EMBL AGA281416 [ TCTTTATTTCCTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTATGGGGAAGCAGCTCCTTCCCCTGTGTTTTGCTGTAAGAAGAAATTGTACTGCAGGATTATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTGAAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGGATTTATTAGCTAAGTAAATCGTTAGTAGAAGCGGCGAGCGGCA ]
[-] EMBL BX621209 [ TCTAGGGTACATTTAAACGAGATAGGATTATGGGGAAGCAGCTCCTTCCCC TGTTTTGCTGTAAGAAGAAATTGTACTGCAGGATTATTTGTGAACAAAGAAGAAAAGCATTAGGAAAAGAAAGCAAAACGGTGGAAGTGTAATTGAAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGTATTTATTAGCTAAGTAAATCGTTAGTAGAAGCGGCGAGCAGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGGTTGAATTTGCAACAAAAGCGACACAAATATCGTGAGTGTGTTGTTTGATCGTGTTTAGCTGAAGGGAAAGCGAATGATAGGGGAGAAAAGTACACAAAGTAGTACATACGTAAACACAGCAAATCATCCAACACAACCAAATGTTGTTAAGGCTGGCGCGTAAGCGTTTGTGTTGCAACAAACGAGCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7591#0 ------------------------------------------------------------
consensus_7591#1 GTGTGTTTGCACGTGCTACGAGGAACCTAGAACCCTTGGAGAACTAGCTGCATACGATGC 60
consensus_7591#0 ------------------------------------------------------------
consensus_7591#1 ACGCCAGGGTGCAACGCTACTATACCTAAATCCCCAGTTTCTCTTACCCGTTTAGTTAAA 120
consensus_7591#0 ------------------------------------------------------------
consensus_7591#1 TAGTGCAGAGGAAAACGGAACGGATTGATGATAGATTTAACCAGCAAAGAGTAGGGATGG 180
consensus_7591#0 ----------------------------------------------GCGCAACATGCCTG 14
consensus_7591#1 CTTCGNAAAGGATCGGACCGGACGAACGGATGTACCAGCTCCGCACCAGGGGTATAGATT 240
* ** *
consensus_7591#0 NCTTTTTGTTGTTANTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTA 74
consensus_7591#1 GTTTTCTTTATTTCCTTTTTTCTTCCTTCTTCTAGGGTACATTTAAACGAGATAGGATTA 300
*** * * ** *********************************************
consensus_7591#0 TGGGGAAGCAGCTCCTTCCCCTGTGTTTTCGCTGTAAGCAAGAAATTGTACTGCAGGATT 134
consensus_7591#1 TGGGGAAGCAGCTCCTTCCCCTGTGTTTT-GCTGTAAG-AAGAAATTGTACTGCAGGATT 358
***************************** ******** *********************
consensus_7591#0 ATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTG 194
consensus_7591#1 ATTTGTGAACAAAGAAGAAAAGCATTAGAAAAAGAAAGCAAAACGGTGGAAGTGTAATTG 418
************************************************************
consensus_7591#0 AAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGGATTTATTAGCTAAGTACAA 254
consensus_7591#1 AAACTGAAATCAAACACACAGCGCAGAAGCTAGAGATAAGGATTTATTAGCTAAGTA-AA 477
********************************************************* **
consensus_7591#0 TCGTTAGTAGAAGCGGCGAGCGGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGG 314
consensus_7591#1 TCGTTAGTAGAAGCGGCGAGCGGCAGCTCGCAGCTGCAAAATGGGGTGGAAAACCAGTGG 537
************************************************************
consensus_7591#0 TTGAATTTGCAACAAAAGCGACACAAATATCGTGAGTGTGTTGATTGATCGTGTTTAGCT 374
consensus_7591#1 TTGAATTTGCAACAAANGCGACACAAATATCGTGAGTGTGTTGATTGATCGTGTTTAGCT 597
**************** *******************************************
consensus_7591#0 GAAGGGAAAGCGAATGATAGGGGAGAAAAGTACACAACGTAGTACATACGTAAACACAGC 434
consensus_7591#1 GAAGGGAAAGCNAATGATAGGGGAGAAAAGTACACGACGTAGTACATACGTAAACACAGC 657
*********** *********************** ************************
consensus_7591#0 AAAT------------------GTTGTTAAGGCTGGCGCGTGTGCGCGTTTGTGTTGCAA 476
consensus_7591#1 AAATCATCCAACACAACCAAATGTTGTTAAGGCTGGCGCGTAAGCG--TTTGTGTTGCAA 715
**** ******************* *** ************
consensus_7591#0 CATACGAGCTCTAACGAAAAGAGGAAACAAAAAAACGGGACAAAATCAGTAATAAATATA 536
consensus_7591#1 CAAACGAGCCC------------------------------------------------- 726
** ****** *
consensus_7591#0 GTTTGAAAGTGACAATGAAAAGCAAAAAACGCGAAGGGTTGTGGAGTAAAAAAAAATAGT 596
consensus_7591#1 ------------------------------------------------------------
consensus_7591#0 CCCAAAACGGTCATTGCAGATTGCAGATCGCGTTGCTTACGGCAATTTTGCTCTACCCTT 656
consensus_7591#1 ------------------------------------------------------------
consensus_7591#0 ATTTGTAGCAACAATTTCCGCATTTCCGCACACATTCCGCATTAGCAGCTGCCCTATTTT 716
consensus_7591#1 ------------------------------------------------------------
consensus_7591#0 GCCTTCTCTCTCGTGTGTTGCATTTTGGTTTGCTGATTAAGG 758
consensus_7591#1 ------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||