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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7650#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1052 fasta sequence
[GAATCGCCCGAGGTTNTATCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTGGAATGTTAGAGCAACCGTACTGTACGACCGACCACCACAGCAATTCCAGAGCATCTCGATTCAGGACAAGCATAACCTGTTTTTGCGCCTTGGAGAAAGTGTCAGCGCCTTCCGCACCGCACAAGACGCAGCGGGTGAAGATATTGTAGAGTGTACGGCGTTCACCACCAAGCACCGTAATGGCGAGATCAAGCTTCGTGACTCAAGACCTGGCCTGCTGGTTTCCAGCACCAGCTGGACACCAGATGAAGATTTCAGTATTTTGCTCAGCGCGTTGGATCAGTATGAGCGAGAAGCATTAGCAATGCCGGCGCACTACCCGAATCTGGTGTGCATTATTACGGGCAAGGGGCCGCTTAAGGAAAAGTACCGCAAAATTGTAGACTCAAAATCGTGGAAGATGGTGAAGCTGGAAATGCCTTGGCTGG-AGAATGAAGACTATCCAAAACTGTTGGCGAGCAGCGATTTGGGCGTATGCCTGCACTACAG-TCTAGTGGACTGGACTTGCCGATGAAGGTCGTGGACATGTTTGGCTGTGGACTGCCCGTTTGTGCCATCCATTTCGATTGTATCAACGAACTTGTGAAGCACGGTGAGAATGGCTTCGTATTTCAGCACCATCAGGAGTTGTCTGAGCAAATTGGCCGTTGGTTCTACGACTTCCCCAGTAACATTGCCTTGGCGAACATGAAGCAGGATATACAGAAGCATCTGAAGCAGTTTCAAACGCTCAGATGGACCGAGAATTGGAGAAATGTCGCATTGCCAGTGTTTAANAANAATAGGCTTAGTAANGTAAGGATTGTTCTTGTTGCTTATTGTGGTTTTTTAGTAAGTAATTAACAACGTTTGTAGGCAGTAAGAAAAGGACTGATTTAATAAAATACCTTTTTTCCAAACGC]
[+] EMBL AL931609 [GAATCGCCCGAGGTTNTATCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTGGAATGTTAGAGCAACCGTACTGTACGACCGACCACCACAGCAATTCCAGAGCATCTCGATTCAGGACAAGCATAACCTGTTTTTGCGCCTTGGAGAAAGTGTCAGCGCCTTCCGCACCGCACAAGACGCAGCGGGTGAAGATATTGTAGAGTGTACGGCGTTCACCACCAAGCACCGTAATGGCGAGATCAAGCTTCGTGACTCAAGACCTGGCCTGCTGGTTTCCAGCACCAGCTGGACACCAGATGAAGATTTCAGTATTTTGCTCAGCGCGTTGGATCAGTATGAGCGAGAAGCATTAGCAATGCCGGCGCACTACCCGAATCTGGTGTGCATTATTACGGGCAAGGGGCCGCTTAAGGAAAAGTACCG AAAATTGTAGACTCAAAATCGTGGAAGATGGTGAAGCTGGAAATGCCTTGGCTGGCAGAATGAAGACTATCCAAAACTGTTGGCGAGCAGCGATTTGGGCGTATGCCTGCACTACAG T ]
[+] EMBL AL930561 [ cccgaggttGAGATCAAGCTTCGTGACTCAAGACCTGGCCTGCTGGTTTCCAGCACCAGCTGGACACCAGATGAAGATTTCAGTATTTTGCTCAGCGCGTTGGATCAGTATGAGCGAGAAGCATTAGCAATGCCGGCGCACTACCCGAATCTGGTGTGCATTATTACGGGCAAGGGGCCGCTTAAGGAAAAGTACCGCAAAATTGTAGACTCAAAATCGTGGAAGATGGTGAAGCTGGAAATGCCTTGGCTGG AGAATGAAGACTATCCAAAACTGTTGGCGAGCAGCGATTTGGGCGTATGCCTGCACTACAG TCTAGTGGACTGGACTTGCCGATGAAGGTCGTGGACATGTTTGGCTGTGGACTGCCCGTTTGTGCCATCCATTTCGATTGTATCAACGAACTTGTGAAGCACGGTGAGAATGGCTTCGTATTTCAGCACCATCAGGAGTTGTCTGAGCAAATTGGCCGTTGGTTCTACGACTTCCCCAGTAACATTGCCTTGGCGAACATGAAGCAGGATATACAGAAGCATCTGAAGCAGTTTCAAACGCTCAGATGGACCGAGAATTGGAGAAATGTCGCATTGCCAGTGTTTAANAANAATAGGCTTAGTAANG ]
[+] EMBL BM579069 [ ccgACTACCCGAATCTAGTGTGCATTATTACGGGCAAGGGGCCGCTTAAGGAAAAGTACCGCAAAATAGTAGACTCAAAATCGTGGAAGATGGTGAAGCTGGAAATGCCTTGGCTGG AGAATGAAGACTATCCAAAACTGTTGGCGAGCAGCGATTTGGGCGTATGCCTGCACTACAGCTCTAGTGGACTGGACTTGCCGATGAAGGTCGTGGACATGTTTGGCTGTGGACTGCCCGTTTGTGCCATCCATTTCGATTGTATCAACGAACTTGTGAAGCACGGTGAGAATGGCTTCGTATTTCAGCACCATCAGGAGTTGTCGGAGCAAATTGGCCGTTGGTTCTACGACTTCCCCAGTAACATTGCCTTGGCGAACATGAAGCAAGATATACAGAAGCATCTGAAGCAGTTCCAAACGCTCAGATGGACCGAGAATTGGAGAAATGTCGCATTGCCAGTGTTTAA AA AATAGGCTTAGTAAGGTAAGGATTGTTCTTGTTGCTTATTGTGGTTTTTTAGTAAGTAATTAACAACGTTTGTAGGCAGTAAGAAAAGGACTGATTTAATAAAATACCTTTTTTCCAAACGC]
consensusID : consensus_7650#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 722 fasta sequence
[CCGCGGACGCGTGGGTGAATTTGCAAGTGCATCGATAAGCGAAAGGATGAACGATAAGAGTAAGGTGCAAAATGCATGTGTTATCGTCCTGGGCGACATTGGACGCAGCCCCCGCATGCAGTACCATGTGAAGAGCCTATCTGAGAACGATTTCTCGGTGGACTTCATCGGATACGTACAATCGCCACCGTTGGAAGAAATCAGAGCCAGTCCCAATGTGCGAATACACGAGCTGAACCCGTTCCCGGAGCTGGAATTGCCGAACATTCTGAAGTACATCTTTAAAACGATATGGCAAGCGTTAGGTTTGCTCATTACTCTAATCAGCATACGGAAGCCGAAGTTTATTCTTTGCCAAAATCCTCCGGCCATCCCGGCGATCATTGTGGCATACCTCTATTGCTTGTTTGCCCGCTCGAAGCTGATTATTGATTGGCATAACTACACGTATTCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTTGGAATGTTAGAGCAACCGTACTGTACGACCGACCACCACAGCAATTCCAGAGCATCTCGATTCAGGACAAGCATAACCTGTTTTTGCGCCTTGGAGAAAGTGTCAGCGCCTTCCGCACCGCACAAGACGCAGCGGGTG]
[+] EMBL BM620384 [CCGCGGACGCGTGGGTGAATTTGCAAGTGCATCGATAAGCGAAAGGATGAACGATAAGAGTAAGGTGCAAAATGCATGTGTTATCGTCCTGGGCGACATTGGACGCAGCCCCCGCATGCAGTACCATGTGAAGAGCCTATCTGAGAACGATTTCTCGGTGGACTTCATCGGATACGTACAATCGCCACCGTTGGAAGAAATCAGAGCCAGTCCCAATGTGCGAATACACGAGCTGAACCCGTTCCCGGAGCTGGAATTGCCGAACATTCTGAAGTACATCTTTAAAACGATATGGCAAGCGTTAGGTTTGCTCATTACTCTAATCAGCATACGGAAGCCGAAGTTTATTCTTTGCCAAAATCCTCCGGCCATCCCGGCGATCATTGTGGCATACCTCTATTGCTTGTTTGCCCGCTCGAAGCTGATTATTGATTGGCATAACTACACGTATTCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTTGGAATGTTAGAGCAACCGTACTGTACGACCGACCACCACAGCAATTCCAGAGCATCTCGATTCAGGACAAGCATAACCTGTTTTTGCGCCTTGGAG ]
[+] EMBL BM586621 [ ccgCGATAAGCGAAAGGATGACCGATAAGAGTAAGGTGCAAAATGCATGTGTTATCGTCCTGGGCGACATTGGGCGCAGCCCCCGCATGCAGTACCATGTGAAGAGCCTGTCTGAGAACGATTTCTCGGTGGACTTCATCGGATACGTACAATCGCCACCGTTGGAAGAAATCAGAGCCAGTCCCAATGTGCGAATACACGAGCTGAACCCGTTCCCGGAGCTGGAATTGCCGAACATTCTGAAGTACATCTTTAAAACGATATGGCAAGCGTTAGGTTTGCTCATTACTCTAATCAGCATACGGAAGCCGAAGTTTATTCTTTGCCAAAATCCTCCGGCCATCCCGGCGATCATTGTGGCATACCTCTATTGCTTGTTTGCCCGCTCGAAGCTGATTATTGATTGGCATAACTACACGTATTCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCTGCCGACGGGTTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTTGGAATGTTAGAGCAACCGTACTG ]
[+] EMBL BX627688 [ CATGTGTTATCGTCCTGGGCGACATTGGACGCAGCCCCCGCATGCAGTACCATGTGAAGAGCCTATCTGAGAACGATTTCTCGGTGGACTTCATCGGATACGTACAATCGCCACCGTTGGAAGAAATCAGAGCCAGTCCCAATGTGCGAATACACGAGCTGAACCCGTTCCCGGAGCTGGAATTGCCGAACATTCTGAAGTACATCTTTAAAACTATATGGCAAGCGTTAGGTTTGCTCATTACTCTAATCAGCATACGGAAGCCGAAGTTTATTCTTTGCCAAAATCCTCCGGCCATCCCGGCGATCATTGTGGCATACCTCTATTGCTTGTTTGCCCGCTCGAAGCTGATTATTGATTGGCATAACTACACGTATTCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTTGCGTCACTAAAGCGATGAAAGATGATCTTTATACGCGTTGGAATGTTAGAGCAACCGTACTGTACGACCGACCACCACAGCAATTCCAGAGCATCTCGATTCAGGACAAGCATAACCTGTTTTTG ]
[+] EMBL BX619358 [ gngggagATCGGCA CG AGG GAAATCTNAGCCAGTCCCAATGTGCGAATACACGAGCTGAACCCGTTCCCGGAGCTGGAATTGCCGAACATTCTGAAGTACATCTTTAAAACGATATGGCAAGCGTTAGGTTTGCTCATTACTCTAATCAGCATACGGAAGCCGAAGTTTATTCTTTGCCAAAATCCTCCGGCCATCCCGGCGATCATTGTGGCATACCTCTATTGCTTGTTTGCCCGCTCGAAGCTGATTATTGATTGGCATAACTACACGTATTCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTTGGA ]
[+] EMBL BX615488 [ ATTTTGGAACTCGAGGCGCCAGACTCTCTGATCGTACGAGTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTTGCGTCACTAAAGCGATGAAAGATGATCTTTACACGCGTTGGAATGTTAGAGCAACCGTACTGTACGACCGGCCACCACAGCAATTCCAGAGCATCTCGATTCAGGACAAGCATAACCTGTTTTTGCGCCTTGGAGAAAGTGTCAGCGCCTTCCGCACCGCACAAGACGCAGCGGGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7650#0 GAATCGCCCGAGGTTNTATCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGA 60
consensus_7650#1 ------------------------------------------------CCG--CGGACGC 10
* * ** ***
consensus_7650#0 GTTGCGAAAAAGGTGGAATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTGCGTCACTA 120
consensus_7650#1 GTGGGTGAATTTGCAAGTGCATCGATAAGCGAAAGGATGAACGATAAGAGTAAGGTGCAA 70
** * ** * *** * *** **** *** * * * * *
consensus_7650#0 AAGCGATGAAAGATGATCTTTACACGCGTGGAATGTTAGAGCAACCGTACTGTACGACCG 180
consensus_7650#1 AATGCATGTGTTATCGTCCTGGGCGACATTGGACGC---AGCCCCCGCA-TGCAGTACCA 126
** *** ** ** * * * * * * *** *** * ** * ***
consensus_7650#0 ACCACCACAGCAATTCCAGAGCA---TCTCGATTCAGGACAAGCATAACCTGTTTTTGCG 237
consensus_7650#1 TGTGAAGAGCCTATCTGAGAACGATTTCTCGGTGGACTTCATCGGATACGTACAATCGCC 186
* ** *** * ***** * * ** ** * * **
consensus_7650#0 CCTTGGAGAAAGTGTCAGCGCCTTCCGCACCGCACAAGACGCAGCGGGTGAAGATATTGT 297
consensus_7650#1 ACCGTTGGAAGAAATCAGAGCCAGTCCCAATGTGCGA-ATACACGAGCTGAACCCGTTCC 245
* *** **** *** * ** * * * * ** * **** **
consensus_7650#0 AGAGTGTACGGCGTTCACCACCAAGCACCGTAATGGCGAGATCAAGCTTCGTGACTCAAG 357
consensus_7650#1 CGGA------GCTGGAATTGCCGAACATTCTGAAGTACATCTTTAAAACGATATGGCAAG 299
* ** * ** * ** * * * * * * * ****
consensus_7650#0 ACCT-GGCCTGCTGGTTTCCAGCACCAGCTGGACACCAGATGAAGATTTCAGTATTTTGC 416
consensus_7650#1 CGTTAGGTTTGCTCATTACTCTAATCAGC-ATACGGAAGCCGAAGTTT---ATTCTTTGC 355
* ** **** ** * * **** ** ** **** ** * *****
consensus_7650#0 TCAGCGCGTTGGATCAGTATGAGCGAGAAGCATTAGCAATGCCGGCGCACTACCCGAATC 476
consensus_7650#1 CAAAATCCTCCGGCCATCC----CGGCGATCATTG-------TGGCATACC-------TC 397
* * * * ** ** * **** *** ** **
consensus_7650#0 TGGTGTGCATTATTACGGGCAAGGGGCCGCTTAAGGAAAAGTACCGCAAAATTGTAGACT 536
consensus_7650#1 TATTGCTTGT--TTGCCCGCTCGAAGCTGATTATTGATTGGCAT-----AACTACA---- 446
* ** * ** * ** * ** * *** ** * * ** * *
consensus_7650#0 CAAAATCGTGGAAGATGGTGAAGCTGGAAATGCCTTGGCTGGAGAATGAAGACTATCCAA 596
consensus_7650#1 ------CGTATTCGATTTTGGAACTCGAGGCGCCAGACTCACTGATCGTACGAGTTGCGA 500
*** *** ** * ** ** *** ** * * * * *
consensus_7650#0 AACTGTTGGCGAGCAGCGATTTGGGCGTATGCCTGCACTACAGTCTAGTGGACTGGACTT 656
consensus_7650#1 AAAAGGTGG-AATCATTCTTTGGCGCAAGGGCAGCCGACGGGTTTTGCGTCACTAAA--- 556
** * *** * ** ** * ** ** * * * *** *
consensus_7650#0 GCCGATGAAGGTCGTGGACATGTTTGGCTGTGGACTGCCCGTTTGTGCCATCCATTTCGA 716
consensus_7650#1 -GCGATGAAAG--ATGATCTTTACACGCGTTGGAATG-----TTAGAGCAACCGT----A 604
******* * ** * * ** **** ** ** ** ** * *
consensus_7650#0 TTGTATCAACGAACTTGTGAAGCACGGTGAGAATGGCTTCGTATTTCAGCACCATCAGGA 776
consensus_7650#1 CTGTA-CGACCGACCACCACAGCAATTCCAGA---GCATCTCGATTCAGGACAAGCATAA 660
**** * ** ** **** *** ** ** ***** ** * ** *
consensus_7650#0 GTTGTCTGAGCAAATTGGCCGTTGGTTCTACGACTTCCCCAGTAACATTGCCTTGGCGAA 836
consensus_7650#1 CCTGTTTTTGCGCCTTGGAGAAAGTGTCAGCGCCTTCCGCACCGCACAAGACGCAGCGGG 720
*** * ** **** * ** ** ***** ** * * ***
consensus_7650#0 CATGAAGCAGGATATACAGAAGCATCTGAAGCAGTTTCAAACGCTCAGATGGACCGAGAA 896
consensus_7650#1 TG---------------------------------------------------------- 722
consensus_7650#0 TTGGAGAAATGTCGCATTGCCAGTGTTTAANAANAATAGGCTTAGTAANGTAAGGATTGT 956
consensus_7650#1 ------------------------------------------------------------
consensus_7650#0 TCTTGTTGCTTATTGTGGTTTTTTAGTAAGTAATTAACAACGTTTGTAGGCAGTAAGAAA 1016
consensus_7650#1 ------------------------------------------------------------
consensus_7650#0 AGGACTGATTTAATAAAATACCTTTTTTCCAAACGC 1052
consensus_7650#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||