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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7681#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1343 fasta sequence
[CCGGGATTTGTTGGATATTTCTTTCGGAGCGGCATCCATAAGCAGCCCGTCGCAGCAACCGCTCGCCGGTCCCTCCGGTACCAGTGGTACGATCGATCCCTGGGGAATGCCCGTTGCCGGTGGATCCCGACCGACGACGACGGATCCCTGGTCGCGAACCTCATCTCCGCCAGCGGTAGTAGATCCGTGGCTAAACACTGCATCGGCCCTACCTACAGCGGGACCATCCACCTCGAAACCTCCGCTGCTTGGAGCGGACACGT-GGCAACCGCGCACACAATCGCCCTCG-GTAACGTCTGGTTCGTCGGTTGAGGGATGGTTGCAAAACGGTGCAGGTGCAGGTGCCGCTGCCGCCGGACCGATGATGTTGAACGGTGCCGGAGCTTCAAATGGAAATCTGGACCCGTGGTACAGCAAAACGAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTGGCAAGCGAATAAACGATCCACGCCCGTGCCTACTGCTGCTGCTGCTGCCAGTGGTGACCCGTGGCAGGCAAACGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTCAGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTTTGGCGCAGCTGGTGGACCTCTAATGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATAATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACCTAGATCCACTGTCATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGACGGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGCCCTCGTAAACCTGGACAATCTAATCAAACCAATGCCGAGCGGTGGCAGTGTGGCGGCAGCGGCCACATCGTCCGCGGCATACAATCCGTTCGGCGAAACCGGTGGTGCCGGTGCACCCGTACAGAAGAACCTATTCCAACAGAATCAACCTCAGGTTCCGTCCATCAATCAATTGAAACAGTCCCCGTTCCCAGTAACGCTTAATCAGGACCCGTGGGCACCGGTTGCAAACATGACCACAGCGCAAGCCAATCTAAACAATAACAATAGCGCTCCCTGGATGAATCCTCAATCGTCGAATCCATTCCTCTCGTAACAAGTTCCCACAACCCAGCTAGAGGTCCATGGCGCAGTGCGCCCCTGGCAGCATCCGCAGAACCTTCGTGCTCTCGACCCAACCA]
[+] EMBL BM601642 [CCGGGATTTGTTGGATATTTCTTTCGGAGCGGCATCCATAAGCAGCCCGTCGCAGCAACCGCTCGCCGGTCCCTCCGGTACCAGTGGTACGATCGATCCCTGGGGAATGCCCGTTGCCGGTGGATCCCGACCGACGACGACGGATCCCTGGTCGCGAACCTCATCTCCGCCAGCGGTAGTAGATCCGTGGCTAAACACTGCATCGGCCCTACCTACAGCGGGACCATCCACCTCGAAACCTCCGCTGCTTGGAGCGGACACGT GGCAACCGCGCACACAATCGCCCTCG GTAACGTCTGGTTCGTCGGTTGAGGGATGGTTGCAAAATGGTGCAGGTGCGGGTGCCGCTGCCGCCGGACCGATGATGATGAACGGTGCCGGAGCTTCAAATGGAAATCTGGACCCGTGGTACAGCAAAACGAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTGGCAAGCGAATAAACGATCCACGCCCGTGCC ]
[+] EMBL BM649997 [ ccGCGGACGCGTGGGCAACCGCGCACACAATCGCCCTCG GTAACATCTGGTTCGTCGGTTGAGGGATGGTTGCAAAACGGTGCAGGTGCAGGTGCCGCTGCCGCCGGACCGATGATGTTGAACGGTGCCGGAGCTTCAAATGGAAATCTGGACCCGTGGTACAGCAAAACGAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTGGCAAGCGAATAAACGATCCACGCCCGTGCCTACTGCTGCTGCTGCTGCCAGTGGTGACCCGTGGCAGGCAAACGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTCAGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTTTGGCGCAGCTGGTGGACCTCTAATGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACA ]
[+] EMBL BM614162 [ cCGCCCACGCGT CCG CTGGTTCGTCGGTTGAGGGATGGTTGCAAAACGGTGCAGGTGCAGGTGCCGCTGCCGCCGGACCGATGATGTTGAACGGTGCCGGAGCTTCAAATGGAAATCTGGACCCGTGGTACAGCAAAACGAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTGGCAAGCGAATAAACGATCCACGCCCGTGCCTACTGCTGCTGCTGCTGCCAGTGGTGACCCGTGGCAGGCAAACGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTCAGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTTTGGCGCAGCTGGTGGACCTCTAATGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATAATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACCTAGATCCACTGTCATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGACGGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGC ]
[+] EMBL BM582923 [ cCGTCTGGTTCGTCGGTTGAGGGATGGTTGCAAAACGGTGCAGGTGCAGGTGCCGCTGCCGCCGGACCGATGATGTTGAACGGTGCCGGAGCTTCAAATGGAAATCTGGACCCGTGGTACAGCAAAACGAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTGGCAAGCGAATAAACGATCCACGCCCGTGCCTACTGCTGCTGCTGCTGCCAGTGGTGACCCGTGGCAGGCAAACGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTCAGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTTTGGCGCAGCTGGTGGACCTCTAATGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATAATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACCTAGATCCACTGTCATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGACGGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGCCCTCGTAAACCTGGACAATCTAATCAA ]
[+] EMBL BM640856 [ ccgCTGGACCCGTGGTACAGCAAAACGAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTGGCAAGCGAATAAACGATCCACGCCCGTGCCTACTGCTGCTGCTGCTGCCAGTGGTGACCCGTGGCAGGCAAACGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTCAGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTTTGGCGCAGCTGGTGGACCTCTAATGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATAATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACCTAGATCCACTGTCATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGACGGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGCCCTCGTAAACCTGGACAATCTAATCAAACCAATGCCGAGCGGTGGCAGTGTGGCGG ]
[+] EMBL BM611167 [ ccgCGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTCAGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTTTGGCGCAGCTGGTGGACCTCTAATGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATAATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACCTAGATCCACTGTCATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGACGGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGCCCTCGTAAACCTGGACAATCTAATCAAACCAATGCCGAGCGGTGGCAGTGTGGCGGCAGCGGCCACATCGTCCGCGGCATACAATCCGTTCGGCGAAACCGGTGGTGCCGGTGCACCCGTACAGAAGAACCTATTCCAACAGAATCAACCTCAGGTT ]
[+] EMBL BM613991 [ ccgCACCGGTGTCCGATCTGGACGAGTTTGACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATAATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACCTAGATCCACTGTCATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGACGGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGCCCTCGTAAACCTGGACAATCTAATCAAACCAATGCCGAGCGGTGGCAGTGTGGCGGCAGCGGCCACATCGTCCGCGGCATACAATCCGTTCGGCGAAACCGGTGGTGCCGGTGCACCCGTACAGAAGAACCTATTCCAACAGAATCAACCTCAGGTTCCGTCCATCAATCAATTGAAACAGTCCCCGTTCCCAGTAACGCTTAATCAGGACCCGTGGGCACCGGTTGCAAACATGACCACAGCGCAAGCCAATCTAAACAATAACAATAGCGCTCCCTGGATGAATCCTCAATCGTCGAATCCATTCCTCTCGTAACAAGTTCCCACAACCCAGCTAGAGGTCCATGGCGCAGTGCGCCCCTGGCAGCATCCGCAGAACCTTCGTGCTCTCGACCCAACCA]
consensusID : consensus_7681#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence
[CCGGTCCATCAATCAATTGAAACAGTCCCCGTTCCCAGTAACGCTTAATCAGGACCCGTGGGCACCGGTTGCAAACATGACCACAGCGCAACACGCCACGTCCAGTAGTAATGGGGCATGGACGCTAAAATAGAACGTCCCTTAACAATCGTGCGCGTGTTAAATCGGAAACAAAACCTTTCCTCACCTTTCACCCATTTCCCTCATCCCAACTATCCACACCACTGCCTCCCTCCCTTGATTCCTCTCAATTTCCCCCACTGTAGGTAGTAATTGATCCGATCGTCCGTTAAATAATATCCTGTCGTGTTGTGCGCATTGGACCTTCATTGGGTGTGCTGCTTCCATGGGCTTGCTGGCTGGCTGGCGCAACAGGGATTTGGTGATTTGGGCTGAATCTTCTATCACACACCACAAACAAACAAACAAACAAAAAGTGTGATCCAGTAACATGCTTGTGCTTGTGCGGTGATTGTATGCTTTAGTATATGCCCGGGTATGCCCCCAGCAACATCAACAGAACATCCATCACTGTCTCTCTCTCTACAACACAACCCAAGCTGCTGCCTCCTTCGCGCGTGTATTTATGTGTCTGCGTATGTGTTTGAATTCCCTTGTACGGGTTTGGGCGC]
[+] EMBL BM655047 [CCGGTCCATCAATCAATTGAAACAGTCCCCGTTCCCAGTAACGCTTAATCAGGACCCGTGGGCACCGGTTGCAAACATGACCACAGCGCAACACGCCACGTCCAGTAGTAATGGGGCATGGACGCTAAAATAGAACGTCCCTTAACAATCGTGCGCGTGTTAAATCGGAAACAAAACCTTTCCTCACCTTTCACCCATTTCCCTCATCCCAACTATCCACACCACTGCCTCCCTCCCTTGATTCCTCTCAATTTCCCCCACTGTAGGTAGTAATTGATCCGATCGTCCGTTAAATAATATCCTGTCGTGTTGTGCGCATTGGACCTTCATTGGGTGTGCTGCTTCCATGGGCTTGCTGGCTGGCTGGCGCAACAGGGATTTGGTGATTTGGGCTGAATCTTCTATCACACACCACAAACAAACAAACAAACAAAAAGTGTGATCCAGTAACATGCTTGTGCTTGTGCGGTGATTGTATGCTTTAGTATATGCCCGGGTATGCCCCCAGCAACATCAACAGAACATCCATCACTGTCTCTCTCTCTACAACACAACCCAAGCTGCTGCCTCCTTCGCGCGTGTATTTATGTGTCTGCGTATGTGTTTGAATTCCCTTGTACGGGTTTGGGCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7681#0 CCGGGATTTGTTGGATATTTCTTTCGGAGCGGCATCCATAAGCAGCCCGTCGCAGCAACC 60
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 GCTCGCCGGTCCCTCCGGTACCAGTGGTACGATCGATCCCTGGGGAATGCCCGTTGCCGG 120
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 TGGATCCCGACCGACGACGACGGATCCCTGGTCGCGAACCTCATCTCCGCCAGCGGTAGT 180
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 AGATCCGTGGCTAAACACTGCATCGGCCCTACCTACAGCGGGACCATCCACCTCGAAACC 240
consensus_7681#1 ----------------------CCGGTCCATCAATCAATTGAAACAGT--CCCCGTTCCC 36
*** ** * ** * * ** ** ** **
consensus_7681#0 TCCGCTGCTTGGAGCGGACACGTGGCAACCGCGCACACAATCGCCCTCGGTAACGTCTGG 300
consensus_7681#1 AGTAACGCTTAATCAGGACCCGTGGGCACCGGTTGCAAACATGACCACAGCGCAACACGC 96
**** **** ***** **** ** * * ** * * *
consensus_7681#0 TTCGTCGGTTGAGGGATGGTTGCAAAACGGTGCAGGTGCAGGTGCCGCTGCCGCCGGACC 360
consensus_7681#1 CACGTCCAGT-AGTAATGGGGCATGGACGCTAAAATAGAACGTCCCTTAACAATCGTGCG 155
**** * ** **** *** * * * * ** ** * ** *
consensus_7681#0 GATGATGTTGAACGGTGCCGGAGCTTCAAATGGAAATCTGGACCCGTGGTACAGCAAAAC 420
consensus_7681#1 CGTGTTA--AATCGGAAACAAAACCTTTCCTC--ACCTTTCACCCAT--TTCCCTCATCC 209
** * * *** * * * * * * * **** * * * * *
consensus_7681#0 GAATGCTGTCCCTATTGGAGCTACTGCGCCTCCCCTGGGCGTTGCATCTGGCGATCCTTG 480
consensus_7681#1 CAA--------CTATCCACACCACTGCCTCCCTCCCTTGATTCCTCTCAATTTCCCCCAC 261
** **** * ***** * * ** * * ** **
consensus_7681#0 GCAAGCGAATAAACGATCCACGCCCGTGCCTACTGCTGCTGCTGCTGCCAGTGGTGACCC 540
consensus_7681#1 TGTAGGTAGTAATTGATCCGATCGTCCGTTAAATAATATC-CTGTCGT--GTTGTGCGCA 318
** * *** ***** * * * * * *** * ** *** *
consensus_7681#0 GTGGCAGGCAAACGCATCCGCTGTTAAGCTAGATCCGTGGGCTCCAGTTAGCAATAACTC 600
consensus_7681#1 TTGG-----ACCTTCATTGGGTGT---GCTGCTTCCATGGGCTT--GCTGGC--TGGCTG 366
*** * *** * *** *** *** ****** * * ** * **
consensus_7681#0 AGCCACGGGAAGTGTTGGAGATTTGGAAGCTACCTT-TGGCGCAGCTGGTGGACCTCTAA 659
consensus_7681#1 GCGCAACAGGGAT-TTGGTGATTTGGGCTGAATCTTCTATCACACACCACAAACAAACAA 425
** * * **** ******* * *** * * ** ** **
consensus_7681#0 TGAATCGACCCTCACCCGTTGGTGCTATCACTTCACCGGTGTCCGATCTGGACGAGTTTG 719
consensus_7681#1 ACAAACAAAAAGTGTGATCCAGTAACATGCTTGTGCTTGTGCGGTGATTGTATGC-TTTA 484
** * * ** ** * * *** ** * * ***
consensus_7681#0 ACATTATTACCAAGCGAGCGGCAAGCAACAACAGTAGCGGCAGCACCACCAACAACAATA 779
consensus_7681#1 GTAT-ATGCCCGGGTATGCCCCCAGCAACATCAACAG----AACATCCATCACTGTCTCT 539
** ** ** * ** * ******* ** ** * ** * **
consensus_7681#0 ATAACCACAATGCCGCCAGCAACAATCTGAATAACAACAGTTCACTGCTACTCGGGGACC 839
consensus_7681#1 CTCTCTACAACACAACC-----CAAGCTGC-TGCCTCCTTCGCGCGTGTATTTATGTGTC 593
* * **** * ** *** *** * * * * * ** * * *
consensus_7681#0 TAGATCCACTGTC--ATCCTCCGGCACGAACTCGAGCTCACCCAGCATGGGCGCGTCGAC 897
consensus_7681#1 TGCGTATGTGTTTGAATTCCCTTGTACGGGTTTGGGCGC--------------------- 632
* * * ** * * * *** * * ** *
consensus_7681#0 GGCCGCAAAGAAGACACCGCAATCGTTCCTCGGCGAAAACTCGGCCCTCGTAAACCTGGA 957
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 CAATCTAATCAAACCAATGCCGAGCGGTGGCAGTGTGGCGGCAGCGGCCACATCGTCCGC 1017
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 GGCATACAATCCGTTCGGCGAAACCGGTGGTGCCGGTGCACCCGTACAGAAGAACCTATT 1077
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 CCAACAGAATCAACCTCAGGTTCCGTCCATCAATCAATTGAAACAGTCCCCGTTCCCAGT 1137
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 AACGCTTAATCAGGACCCGTGGGCACCGGTTGCAAACATGACCACAGCGCAAGCCAATCT 1197
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 AAACAATAACAATAGCGCTCCCTGGATGAATCCTCAATCGTCGAATCCATTCCTCTCGTA 1257
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 ACAAGTTCCCACAACCCAGCTAGAGGTCCATGGCGCAGTGCGCCCCTGGCAGCATCCGCA 1317
consensus_7681#1 ------------------------------------------------------------
consensus_7681#0 GAACCTTCGTGCTCTCGACCCAACCA 1343
consensus_7681#1 --------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||