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Anopheles gambiae
cluster # 7727 cluster # 7727       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7727#0 length = 1916 sequences # 6  
consensus_7727#1 length = 1070 sequences # 1  
consensus_7727#2 length = 630 sequences # 1  

consensusID : consensus_7727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1916
fasta sequence
                              [CGACTGTTGCTAGAACTGGAAAAAGTAGTTACGCAGCTCGATTTGCCGCATGTTCACCAGCTTGCGCTGACAGATACTGATCTAACTCCAAAGGGTTTGCCAGCAGCTATAGCAGCAGGGAAAGCACTGCAGATGGCAATGAACAGTGACATCGACCCAGCACTTTTGCGCCTTACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGCCGTCATTTGAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTCACAAATGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAACTATGGATAGAAAGGCATACGATGCCCTTATTAAAGTTTACACTGCTTCATTAAGCAAAGTTTACGACCGGGACATTCAGATATTTTTCGAAAACGCTAAACAAGCACTGACACTAAAGCAATTCAGCTCTAGAGAGGATATTAACAATAGTTCAATAAGCAACAAATTAAAACTTGGTCCACAATCAAACAAACAACCAGCACAGCCGTACGGCATTTTAGGTACCAGCAAAGAGATGTGGTCTCCAGGCGCAGAAGCAATTGAGCGGCAACGATTTGATTCAATTTTGGAAAAGGTGCTTGCGGAACTAGAACCAGTGGCATTAAGCGAACAGCA-TTTTTGCATTGCG-TTTTTT-CAATTGGACGTAATTAGTCCTACGGCTAAAAATAC-GCAAACAACACTGGATGCTGCTAGTAACGAGACAGTGAACCAAAAGGATGAACGAGATACAGCTCCACACATTCCACAGCGAAGGCTTGATCGTCAAATTAACGAAGATGTCCGCCGTATGATGGGGGAATTATTTGCTAACCTTGAAACGGAAATAAACAATTTTATCTTGAGTTTTGAAAAACTAGATAACTACTACTCATTGTACGTGCTAGTGCGTCTTACACAACATGTAATGTCGGCCCAAGACGCACAGTCCTTTCTAAGCATGACGTTTGCTTCAGCTCTTATACACGTGAAACGAAGCTTTGATAAATTTATGCAATCACAGTTGCAGTCAATTGATGAATCTAAGCTTCCGAAGCGCTCTAAATGTGGCCTTCTACCTTACGTGGAAAACTTTGAAGAATTC-GCCGTAACCGCTGAAAACATTTTTAAGAAAACGGAGCGCCGAAATGATCTTGATAAATGGTACCTTAAACTGGTGGAAGCAATTTTCGAACGCATTCCTGTGCACGCCGCCGAACATTCAAAAACGCCGCACCAAGTAGTAAAAATGGAAAACTATCATCGNAATGCACTCCACGTTTATCTCAACTAAAGATTCCAGTTTTGGAATCATTGCGAAAGGAAGCAAAAACACGATATAATGATGCACAGAAAGCATACGTTACTAAATACTTTGGCCGGCCGCTAGAACGACTAAACCAATTTTTCGAAGGAATACAAGTGCGTGTGCAGCAAGGTGTGAAAGATACCGAAATTAGCTACCAAATGGCGTACTCTAAGCAAGAATTACGTAAAGTAATAAGTCTTTATCCAGCCCGTGAAGTAAAGAAGGGACTTGAGCAACTGTACAAAAAGGTAGAAAAACATCTTTGTGAGGAAGAAAACTTGCTACAAGTAGTGTGGCGAGCTATGCAGCAGGAATTTATAAACCAATACAACTCATTAGAGCAATGGATCCAACGTTGTTATGCCGGTTCAATGATAACTCTAGAGTTTACCATCAACGACCTGTTGGATTTTTTCTCTGAGATAGCACAGTCACATTAGGCCGAAGAAGAGCTCCAGGACATAATTAAAACGTTTATTAAACAGCCCATCCATACAAGTCGAAGAGTGCTTCGGTTTTAATAAACT]

[+] EMBL BX626846             [CGACTGTTGCTAGAACTGGAAAAAGTAGTTACGCAGCTCGATTTGCCGCATGTTCACCAGCTTGCGCTGACAGATACTGATCTAACTCCAAAGGGTTTGCCAGCAGCTATAGCAGCAGGGAAAGCACTGCAGATGGCAATGAACAGTGACATCGACCCAGCACTTTTGCGCCTTACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGCCGTCATTTGAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTCACAAATGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAACTATGGATAGAAAGGCATACGATGCCCTTATTGAAGTTTACACTGCTTCATTAAGCAAAGTTTACGACCGGGACATTCAGATATTTTTCGAAAACGCTAAACAAGCACTGACACTAAAGCAATTCAGCTCTAGAGAGGATATTAACAATAGTTCAATAAGCAACAAATTAAAACTTGGTCCACAATCAAACAAACAACCAGCACAGCCGTACGGCATTTTAGGTACCAGCAAAGAGATGTGGTCTCCAGGCGCAGACCCAATTGAGCGGCAACGATTTGATTCAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM615732             [                                                                   ccgCAGATACTGATCTAACTCCAAAGGGTTTGCCAGCAGCTATAGCAGCAGGGAAAGCACTGCAGATGGCAATGAACAGTGACATCGACCCTGCACTTTTGCGCCTTACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGCCGTCATTTGAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTCACAAATGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAACTATGGATAGAAAGGCATACGATGCCCTTATTAAAGTTTACACTGCTTCGTTAAGCAAAGTTTACGACCGGGACATTCAGATATTTTTCGAAAACGCTAAACAAGCACTGACACTAAAGCAATTCAGCTCTAGAGAGGATATTAACAATAGTTCAATAAGCAACAAATTAAAACTTGGTCCACAATCAAACAAACAACCAGCACAGCCGTATGGCATTTTAGGTACCAGCAAAGAGATGTGGTCTCCAGGCGCAGAAGCAATTGAGCGGCAACGATTTGATTCAATTTTGGAAAAGGTGCTTGCGGAACTAGAACCAGTGGCATTAAGCGAACAGCATTTTTTGCATTGCGTTTTTTT CAATGGGACGTAATTAGTCCTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM583181             [                                                                                                                                                                                                                                                                                                                                            ccgGCATAAAGAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAACTATGGATAGAAAGGCATACGATGCCCTTATTAAAGTTTACACTGCTTCATTAAGCAAAGTTTACGACCGGGACATTCAGATATTTTTCGAAAACGCTAAACAAGCACTGACACTAAAGCAATTCAGCTCTAGAGAGGATATTAACAATAGTTCAATAAGCAACAAATTAAAACTTGGTCCACAATCAAACAAACAACCAGCACAGCCGTACGGCATTTTAGGTACCAGCAAAGAGATGTGGTCTCCAGGCGCAGAAGCAATTGAGCGGCAACGATTTGATTCAATTTTGGAAAAGGTGCTTGCGGAACTAGAACCAGTGGCATTAAGCGAACAGCA TTTTTGCATTGCG TTTTTT CAATTGGACGTAATTAGTCCTACGGCTAAAAATAC GCAAACAACACTGGATGCTGCTAGTAACGAGACAGTGAACCAAAAGGATGAACGAGATACAGCTCCACACATTCCACAGCGAAGGCTTGATCGTCAAATTAACGAAGATGTCCGCCGTATGATGGGGGAATTATTTGCTAACCTTGAAACGGAAATAAACAATTTTATCTTGAGTTTTGAAAAACTAGATAACTACTACTCATTGTACGTGCTAGTGCGTCTTACACAACATGTAATGTCGGCCCAAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09CLI             [                                                                                                                                                                                                                                                                                                                                                                                                    ATAGAAAGG ATACGATG CCTTATTAAAGTTTACACTGCTTCATTAAGCAAAGTTTACGACCGGGACATTCAGATATTTTTCGAAAACGCTAAACAAGCACTGACACTAAAGCAATTCAGCTCTAGAGAGGATATTAACAATAGTTCAATAAGCAACAAATTAAAACTTGGTCCACAATCAAACAAACAACCAGCACAGCCGTACGGCATTTTAGGTACCAGCAAAGAGATGTGGTCTCCAGGCGCAGAAGCAATTGAGCGGCAACGATTTGATTCAATTTTGGAAAAGGTGCTTGCGGAACTAGAACCAGTGGCATTAAGCGAACAGCA TTTTTGCATTGCG TTTTTT CAATTGGACGTAATTAGTCCTACGGCTAAAAATAC GCAAACAACACTGGATGCTGCTAGTAACGAGACAGTGAACCAAAAGGATGAACGAGATACAGCTCCACACATTCCACAGCGAAGGCTTGATCGTCAAATTAACGAAGATGTCCGCCGTATGATGGGGGAATTATTTGCTAACCTTGAAACGGAAATAAACAATTTTATCTTGAGTTTTGAAAAACTAGATAACTACTACTCATTGTACGTGCTAGTGCGTCTTACACAACATGTAATGTCGGCCCAAGACGCACAGTCCTTTCTAAGCATGACGTTTGCTTCAGCTCTTATACACGTGAAA GAAGCTTTGATAAATTTATGCAATCACAGTTGCAGTCAATTGATGAATCTAAGCTTCCGAAGCGCTCTAAATGTGGCCTTCTACCTTACGTGGAAAACTTTGAAGAATTC GCCGTAACCGCTGAAAACATTTTTAAGAAAACGGAGCGCCGAAATGATCTTGATAAATGGTACCTTAAACTGGTGGAAGCAATTTTCGAACGCATTCCTGTGCACGCCGCCGAACATTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX619457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ttnnG TTTTTTCCAATTGGACGTAATTAGTCCTACGGCTAAAAATACGGCAAACAACACTGGATGCTGCTAGTAACGAGACAGTGAACCAAAAGGATGAACGAGATACAGCTCCACACATTCCACAGCGAAGGCTTGATCGTCAAATTAACGAAGATGTCCGCCGTATGATGGGGGAATTATTTGCTAACCTTGAAACGGAAATAAACAATTTTATCTTGAGTTTTGAAAAACTAGATAACTACTACTCATTGTACGTGCTAGTGCGTCTTACACAACATGTAATGTCGGCCCAAGACGCACAGTCCTTTCTAAGCATGACGTTTGCTTCAGCTCTTATACACGTGAAACGAAGCTTTGATAAATTTATGCAATCACAGTTGCAGTCAATTGATGAATCTAAGCTTCCGAAGCGCTCTAAATGTGGCCTTCTACCTTACGTGGAAAACTTTGAAGAATNCNGCCGTAACCGCTGAAAACATTTTTAAGAAAACGGAGCGCCGAAATGATCTTGATAAATGGTACCTTAAACTGGTGGAAGCTANNTTCGAACGCATNCCTGTGCACGCCGCCGAACATTCAAAAACGCCGCACCAAGTAGTAAAAATGGAAAACTATCATCGNAATGCACTCCACGTTTATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS09CLJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACAACATGTAATGTCGGCCCAAGACGCACAGTCCTTTCTAAGCATGACGTTTGCTTCAGCTCTTATACACGTGAAACGAAGCTTTGATAAATTTATGCAATCACAGTTGCAGTCAATTGATGAATCTAAGCTTCCGAAGCGCTCTAAATGTGGCCTTCTACCTTACGTGGAAAACTTTGAAGAATTC GCCGTAACCGCTGAAAACATTTTTAAGAAAACGGAGCGCCGAAATGATCTTGATAAATGGTACCTTAAACTGGTGGAAGCAATTTTCGAACGCATTCCTGTGCACGCCGCCGAACATTCAAAAACGCCGCACCAAGTAGTAAAAATGGAAAACTATCATCG AATGCACTCCACG TTATCTCAACTAAAGATTCCAGTTTTGGAATCATTGCGAAAGGAAGCAAAAACACGATATAATGATGCACAGAAAGCATACGTTACTAAATACTTTGGCCGGCCGCTAGAACGACTAAACCAATTTTTCGAAGGAATACAAGTGCGTGTGCAGCAAGGTGTGAAAGATACCGAAATTAGCTACCAAATGGCGTACTCTAAGCAAGAATTACGTAAAGTAATAAGTCTTTATCCAGCCCGTGAAGTAAAGAAGGGACTTGAGCAACTGTACAAAAAGGTAGAAAAACATCTTTGTGAGGAAGAAAACTTGCTACAAGTAGTGTGGCGAGCTATGCAGCAGGAATTTATAAACCAATACAACTCATTAGAGCAATGGATCCAACGTTGTTATGCCGGTTCAATGATAACTCTAGAGTTTACCATCAACGACCTGTTGGATTTTTTCTCTGAGATAGCACAGTCACATTAGGCCGAAGAAGAGCTCCAGGACATAATTAAAACGTTTATTAAACAGCCCATCCATACAAGTCGAAGAGTGCTTCGGTTTTAATAAACT]


>consensus_7727#0 CGACTGTTGCTAGAACTGGAAAAAGTAGTTACGCAGCTCGATTTGCCGCATGTTCACCAG CTTGCGCTGACAGATACTGATCTAACTCCAAAGGGTTTGCCAGCAGCTATAGCAGCAGGG AAAGCACTGCAGATGGCAATGAACAGTGACATCGACCCAGCACTTTTGCGCCTTACAGCT GTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGC CGTCATTTGAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTC ACAAATGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATG GAGCTTATGCACTGGATGAAAACTATGGATAGAAAGGCATACGATGCCCTTATTAAAGTT TACACTGCTTCATTAAGCAAAGTTTACGACCGGGACATTCAGATATTTTTCGAAAACGCT AAACAAGCACTGACACTAAAGCAATTCAGCTCTAGAGAGGATATTAACAATAGTTCAATA AGCAACAAATTAAAACTTGGTCCACAATCAAACAAACAACCAGCACAGCCGTACGGCATT TTAGGTACCAGCAAAGAGATGTGGTCTCCAGGCGCAGAAGCAATTGAGCGGCAACGATTT GATTCAATTTTGGAAAAGGTGCTTGCGGAACTAGAACCAGTGGCATTAAGCGAACAGCAT TTTTGCATTGCGTTTTTTCAATTGGACGTAATTAGTCCTACGGCTAAAAATACGCAAACA ACACTGGATGCTGCTAGTAACGAGACAGTGAACCAAAAGGATGAACGAGATACAGCTCCA CACATTCCACAGCGAAGGCTTGATCGTCAAATTAACGAAGATGTCCGCCGTATGATGGGG GAATTATTTGCTAACCTTGAAACGGAAATAAACAATTTTATCTTGAGTTTTGAAAAACTA GATAACTACTACTCATTGTACGTGCTAGTGCGTCTTACACAACATGTAATGTCGGCCCAA GACGCACAGTCCTTTCTAAGCATGACGTTTGCTTCAGCTCTTATACACGTGAAACGAAGC TTTGATAAATTTATGCAATCACAGTTGCAGTCAATTGATGAATCTAAGCTTCCGAAGCGC TCTAAATGTGGCCTTCTACCTTACGTGGAAAACTTTGAAGAATTCGCCGTAACCGCTGAA AACATTTTTAAGAAAACGGAGCGCCGAAATGATCTTGATAAATGGTACCTTAAACTGGTG GAAGCAATTTTCGAACGCATTCCTGTGCACGCCGCCGAACATTCAAAAACGCCGCACCAA GTAGTAAAAATGGAAAACTATCATCGNAATGCACTCCACGTTTATCTCAACTAAAGATTC CAGTTTTGGAATCATTGCGAAAGGAAGCAAAAACACGATATAATGATGCACAGAAAGCAT ACGTTACTAAATACTTTGGCCGGCCGCTAGAACGACTAAACCAATTTTTCGAAGGAATAC AAGTGCGTGTGCAGCAAGGTGTGAAAGATACCGAAATTAGCTACCAAATGGCGTACTCTA AGCAAGAATTACGTAAAGTAATAAGTCTTTATCCAGCCCGTGAAGTAAAGAAGGGACTTG AGCAACTGTACAAAAAGGTAGAAAAACATCTTTGTGAGGAAGAAAACTTGCTACAAGTAG TGTGGCGAGCTATGCAGCAGGAATTTATAAACCAATACAACTCATTAGAGCAATGGATCC AACGTTGTTATGCCGGTTCAATGATAACTCTAGAGTTTACCATCAACGACCTGTTGGATT TTTTCTCTGAGATAGCACAGTCACATTAGGCCGAAGAAGAGCTCCAGGACATAATTAAAA CGTTTATTAAACAGCCCATCCATACAAGTCGAAGAGTGCTTCGGTTTTAATAAACT



consensusID : consensus_7727#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1070
fasta sequence
                              [CAAGAATTNGCCCCGAGGTTTCAATTCAGTCTCTAGAGAGGATATTAACAATAGTTCAATTAAGCAACAATACTTAACATAGCTTGGTCCACAATCAAACANACAACCAGCACAGCCGTACGGCGATTTTAGGTAGCCTAGCAGAAGAGATGTGGTCTGCCTACGGTCNGCAGAAGACAAGTTCGACGCGTGCAAAGCGATTGNTGAGTTTCGAATTGTGTCTTGGGAATACAGACGGGATGCTCTGACGCGAACCTATGAACACCCAGTTCGGGACTACTTCAACGCGAACAGCCNAATTTATATGTGCAGTTGGTCAGCTTTATATATACAAATCTGGGAACGGTACATTACGTCCTACGAGGTCGTNAAAAGACNTTACGGCANCATCAGAACGAGCTGTGGCATGTCGTGGCGTGAGACATNACAGCGGAGAAACCAGCTGGTATACACAAGACAGGGTATGCAGACGTAAGGAAAATTACCAGCGCGTCCANCAGCGATATCCAAACAGGCGCNGAGGGCCTTGGGATACGGTCAATCATTGTAAAACGGCACAAGCAATTGCTTCCGGACTCCGGNTAAAATTGTGAATTGAAGCGCGGGGGGNAGCACTTGCTTCATCTCGTGGGCCAGCTGACAACNCCCTTGTGTCAGTAAGCAACCGGCGGCAGANGCACACTNAACAACACCCANACTGTTATAGTACCTCCAGTTTGGAAAGACTTGTANCGTGGGCACACGAGAAGCAACCTTCAAGAGCAGTTACAACACTANCCTTAAAGNCGCTCCCCNACGCTTCTATGGNTAACCGGCGTTTGNTGCGGTTAAGTGCTNTGGTCCGTGGTTANCCTTGTTAACCTANACACCAACAACCCCAAGTTGGGATNCGTAACGATTGGGTTCCCGCGGAGCACCCCCCAATATGAACGCGGACCAAACACAAACNANAACCCCGCTTCTTNTACCNTTACAGGCCGTACGCTTGAACCACGGGCATAACTATGTGGACCGCATTGTNCACAGAGACCCACTTCCCTTNGTGTAACTTANCCACCCCGCGNTAGTNA]

[+] EMBL AL930141             [CAAGAATTNGCCCCGAGGTTTCAATTCAGTCTCTAGAGAGGATATTAACAATAGTTCAATTAAGCAACAATACTTAACATAGCTTGGTCCACAATCAAACANACAACCAGCACAGCCGTACGGCGATTTTAGGTAGCCTAGCAGAAGAGATGTGGTCTGCCTACGGTCNGCAGAAGACAAGTTCGACGCGTGCAAAGCGATTGNTGAGTTTCGAATTGTGTCTTGGGAATACAGACGGGATGCTCTGACGCGAACCTATGAACACCCAGTTCGGGACTACTTCAACGCGAACAGCCNAATTTATATGTGCAGTTGGTCAGCTTTATATATACAAATCTGGGAACGGTACATTACGTCCTACGAGGTCGTNAAAAGACNTTACGGCANCATCAGAACGAGCTGTGGCATGTCGTGGCGTGAGACATNACAGCGGAGAAACCAGCTGGTATACACAAGACAGGGTATGCAGACGTAAGGAAAATTACCAGCGCGTCCANCAGCGATATCCAAACAGGCGCNGAGGGCCTTGGGATACGGTCAATCATTGTAAAACGGCACAAGCAATTGCTTCCGGACTCCGGNTAAAATTGTGAATTGAAGCGCGGGGGGNAGCACTTGCTTCATCTCGTGGGCCAGCTGACAACNCCCTTGTGTCAGTAAGCAACCGGCGGCAGANGCACACTNAACAACACCCANACTGTTATAGTACCTCCAGTTTGGAAAGACTTGTANCGTGGGCACACGAGAAGCAACCTTCAAGAGCAGTTACAACACTANCCTTAAAGNCGCTCCCCNACGCTTCTATGGNTAACCGGCGTTTGNTGCGGTTAAGTGCTNTGGTCCGTGGTTANCCTTGTTAACCTANACACCAACAACCCCAAGTTGGGATNCGTAACGATTGGGTTCCCGCGGAGCACCCCCCAATATGAACGCGGACCAAACACAAACNANAACCCCGCTTCTTNTACCNTTACAGGCCGTACGCTTGAACCACGGGCATAACTATGTGGACCGCATTGTNCACAGAGACCCACTTCCCTTNGTGTAACTTANCCACCCCGCGNTAGTNA]


>consensus_7727#1 CAAGAATTNGCCCCGAGGTTTCAATTCAGTCTCTAGAGAGGATATTAACAATAGTTCAAT TAAGCAACAATACTTAACATAGCTTGGTCCACAATCAAACANACAACCAGCACAGCCGTA CGGCGATTTTAGGTAGCCTAGCAGAAGAGATGTGGTCTGCCTACGGTCNGCAGAAGACAA GTTCGACGCGTGCAAAGCGATTGNTGAGTTTCGAATTGTGTCTTGGGAATACAGACGGGA TGCTCTGACGCGAACCTATGAACACCCAGTTCGGGACTACTTCAACGCGAACAGCCNAAT TTATATGTGCAGTTGGTCAGCTTTATATATACAAATCTGGGAACGGTACATTACGTCCTA CGAGGTCGTNAAAAGACNTTACGGCANCATCAGAACGAGCTGTGGCATGTCGTGGCGTGA GACATNACAGCGGAGAAACCAGCTGGTATACACAAGACAGGGTATGCAGACGTAAGGAAA ATTACCAGCGCGTCCANCAGCGATATCCAAACAGGCGCNGAGGGCCTTGGGATACGGTCA ATCATTGTAAAACGGCACAAGCAATTGCTTCCGGACTCCGGNTAAAATTGTGAATTGAAG CGCGGGGGGNAGCACTTGCTTCATCTCGTGGGCCAGCTGACAACNCCCTTGTGTCAGTAA GCAACCGGCGGCAGANGCACACTNAACAACACCCANACTGTTATAGTACCTCCAGTTTGG AAAGACTTGTANCGTGGGCACACGAGAAGCAACCTTCAAGAGCAGTTACAACACTANCCT TAAAGNCGCTCCCCNACGCTTCTATGGNTAACCGGCGTTTGNTGCGGTTAAGTGCTNTGG TCCGTGGTTANCCTTGTTAACCTANACACCAACAACCCCAAGTTGGGATNCGTAACGATT GGGTTCCCGCGGAGCACCCCCCAATATGAACGCGGACCAAACACAAACNANAACCCCGCT TCTTNTACCNTTACAGGCCGTACGCTTGAACCACGGGCATAACTATGTGGACCGCATTGT NCACAGAGACCCACTTCCCTTNGTGTAACTTANCCACCCCGCGNTAGTNA



consensusID : consensus_7727#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 630
fasta sequence
                              [CAAGAATCCCCCGAGGTTACTCCAAAGGGTTTGCAGCAGCTATAGCAGCAGGAAAGCACTGCAGATGGCAATGAACAGTGACATCGACCCAGCACTTTTGCGCCTTACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGCCGTCATTTGAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTCACAAATGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAACTATGGATAGCAANGGCCTACGATGCCCTTACTTNACAGTCTACACTAGNCTTCATTCAAGCAAAGTTTACGACCGGGACATTCAGATATTCTTCGAAAACGCTAAACAAGCACTGACACTAAACGCAATTCAGCGTCTAGCAGAGGATATTCAACAATAGTTCAATAAGCAACAAATTACAANACTTGGTCCACCAATCCAAACAAACAAACCCAGCACAGCACGNACGGCCTTTTNAGGGTANCCAGCCAAAAGGAGATGTGGGTCTCCAGCGCGCANANAGCAATCTGAGCGGNAAANCGCATCTCGAATTTC]

[+] EMBL AL695275             [CAAGAATCCCCCGAGGTTACTCCAAAGGGTTTGCAGCAGCTATAGCAGCAGGAAAGCACTGCAGATGGCAATGAACAGTGACATCGACCCAGCACTTTTGCGCCTTACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGCCGTCATTTGAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTCACAAATGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAACTATGGATAGCAANGGCCTACGATGCCCTTACTTNACAGTCTACACTAGNCTTCATTCAAGCAAAGTTTACGACCGGGACATTCAGATATTCTTCGAAAACGCTAAACAAGCACTGACACTAAACGCAATTCAGCGTCTAGCAGAGGATATTCAACAATAGTTCAATAAGCAACAAATTACAANACTTGGTCCACCAATCCAAACAAACAAACCCAGCACAGCACGNACGGCCTTTTNAGGGTANCCAGCCAAAAGGAGATGTGGGTCTCCAGCGCGCANANAGCAATCTGAGCGGNAAANCGCATCTCGAATTTC]


>consensus_7727#2 CAAGAATCCCCCGAGGTTACTCCAAAGGGTTTGCAGCAGCTATAGCAGCAGGAAAGCACT GCAGATGGCAATGAACAGTGACATCGACCCAGCACTTTTGCGCCTTACAGCTGTTCAAGA TCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACAATAAGCCGTCATTT GAATAATCTATTCATCCATCTTGGCAATCTTGGAGATTCGCAAACACCTTTCACAAATGA ATTGTCGCTTCCAAAGCACCAGAACGTGCATAAAGAGCTATGTACGTTCATGGAGCTTAT GCACTGGATGAAAACTATGGATAGCAANGGCCTACGATGCCCTTACTTNACAGTCTACAC TAGNCTTCATTCAAGCAAAGTTTACGACCGGGACATTCAGATATTCTTCGAAAACGCTAA ACAAGCACTGACACTAAACGCAATTCAGCGTCTAGCAGAGGATATTCAACAATAGTTCAA TAAGCAACAAATTACAANACTTGGTCCACCAATCCAAACAAACAAACCCAGCACAGCACG NACGGCCTTTTNAGGGTANCCAGCCAAAAGGAGATGTGGGTCTCCAGCGCGCANANAGCA ATCTGAGCGGNAAANCGCATCTCGAATTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7727#0      CGACTGTTGCTAGAACTGGAAAAAGTAGTTACGCAGCTCGATTTGCCGCATGTTCACCAG 60
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      --------------------------------------------------------CAAG 4
                                                                                  

consensus_7727#0      CTTGCGCTGACAGATACTGATCTAA-CTCCAAAGGGTTTGCCAGCAGCTATAGCAGCAGG 119
consensus_7727#2      ------CAAGAATCCCCCGAGGTTA-CTCCAAAGGGTTTGC-AGCAGCTATAGCAGCAGG 52
consensus_7727#1      AATTNGCCCCGAGGTTTCAATTCAGTCTCTAGAGAGGATATTAACAATAGTTCAATTAAG 64
                            *    *       *      *** * ** *  *   * **    *   *  * *

consensus_7727#0      GAA-AGCACTGCAGATGGC--AATGAACAGTGACATCGAC--CCAGCACTTTTGCGCCTT 174
consensus_7727#2      -AA-AGCACTGCAGATGGC--AATGAACAGTGACATCGAC--CCAGCACTTTTGCGCCTT 106
consensus_7727#1      CAACAATACTTAACATAGCTTGGTCCACAATCAAACANACAACCAGCACA-----GCCGT 119
                       ** *  ***  * ** **    *  *** * * *   **  *******      *** *

consensus_7727#0      ACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACA 234
consensus_7727#2      ACAGCTGTTCAAGATCAGCGCAAAAGATTCGAAAAATGGAAGGCAAAATTTTCGCAAACA 166
consensus_7727#1      ACGGCGATTTTAGGT-AGCCTAGCAGA--AGAGATGTGGTCTGCCTACGGTCNGCAGAAG 176
                      ** **  **  ** * ***  *  ***   ** *  ***   **  *   *  *** *  

consensus_7727#0      ATAAGC-CGTCATTTGAATAATCTATTCATCCATCTTGGCA---ATCTTGGAGATTCGCA 290
consensus_7727#2      ATAAGC-CGTCATTTGAATAATCTATTCATCCATCTTGGCA---ATCTTGGAGATTCGCA 222
consensus_7727#1      ACAAGTTCGACGCGTGCA-AAGCGATTGNTGAGTTTCGAATTGTGTCTTGGGAATACAGA 235
                      * ***  ** *   ** * ** * ***  *   * * *       ******  ** *  *

consensus_7727#0      ---AACACCTTT-CACAAA----TGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAA 342
consensus_7727#2      ---AACACCTTT-CACAAA----TGAATTGTCGCTTCCAAAGCACCAGAACGTGCATAAA 274
consensus_7727#1      CGGGATGCTCTGACGCGAACCTATGAACACCCAGTTCGGGACTACTTCAACGCGAACAGC 295
                          *  *  *  * * **    ****    *  ***   *  **   **** * * *  

consensus_7727#0      GAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAA-CTATGGATAG-A----AAG 396
consensus_7727#2      GAGCTATGTACGTTCATGGAGCTTATGCACTGGATGAAAA-CTATGGATAGCA----ANG 329
consensus_7727#1      CNAATTTATATGTGCAGTTGGTCAGCTTTATATATACAAATCTGGGAACGGTACATTACG 355
                          * * ** ** **    *         *  **  *** **  * *  * *    * *

consensus_7727#0      GCATACGATGCCCTTA--TTAAAGTTTACACT--GCTTCATT-AAGCAAAGTTTACGAC- 450
consensus_7727#2      GCCTACGATGCCCTTACTTNACAGTCTACACTAGNCTTCATTCAAGCAAAGTTTACGAC- 388
consensus_7727#1      TCCTACGAGGTCGTNA----AAAGACNTTACG--GCANCATCAGAACGAGCTGTGGCATG 409
                       * ***** * * * *    * **     **    *  ***   * * *  * *   *  

consensus_7727#0      -CGGGACATTCAGATATTTTTCGAAAACGCTAAACAAGCACTGACACTAAA-GCAATTCA 508
consensus_7727#2      -CGGGACATTCAGATATTCTTCGAAAACGCTAAACAAGCACTGACACTAAACGCAATTCA 447
consensus_7727#1      TCGTGGCGTG-AGACATNACAGCGGAGAAACCAGCTGGTATACACAAGACAGGGTATGCA 468
                       ** * * *  *** **        *      * *  * *   ***  * * *  ** **

consensus_7727#0      GC-TCTAG-AGAGGATATT-AACAATAGTTCAATAAGCAACAAATTA--AAACTTGGTCC 563
consensus_7727#2      GCGTCTAGCAGAGGATATTCAACAATAGTTCAATAAGCAACAAATTACAANACTTGGTCC 507
consensus_7727#1      GA----CGTAAGGAAAATT-ACCAGCGCGTCCANCAGCGATATCCAAACAGGCGCNGAGG 523
                      *      * *  * * *** * **     ** *  *** * *    *  *  *   *   

consensus_7727#0      ACAA--TCAAACAAACAA-----CCAGCACAGC-CGTACGGCATTTTAGGT---ACCAGC 612
consensus_7727#2      ACCAATCCAAACAAACAAAC---CCAGCACAGCACGNACGGCCTTTTNAGGGTANCCAGC 564
consensus_7727#1      GCCTTGGGATACGGTCAATCATTGTAAAACGGCACAAGCAATTGCTTCCGGACTCCGGNT 583
                       *      * **   ***       *  ** ** *   *      **  *     *    

consensus_7727#0      ---AAAGAGATGTGG-TCTCCAG-----GCGCAGAA-GCAAT-TGAGCGGCAACGATTTG 661
consensus_7727#2      CAAAAGGAGATGTGGGTCTCCAGC----GCGCANANAGCAATCTGAGCGGNAAANCGCAT 620
consensus_7727#1      AAAATTGTGAATTGAAGCGCGGGGGGNAGCACTTGCTTCATCTCGTGGGCCAGCTGACAA 643
                         *  * **  **   * *  *     ** *      **    * * *  *        

consensus_7727#0      ATTCAATTT-TGGAAAAGGTGCTTGCGGAACTAGAACCAGTGGCATTAAGCGAACAGCAT 720
consensus_7727#2      CTCGAATTT-C------------------------------------------------- 630
consensus_7727#1      CNCCCTTGTGTCAGTAAGCAACCGGCGGCAGANGCACACTNAACAACACCCANACTGTTA 703
                            * *                                                   

consensus_7727#0      TTTTGCATTGCGTTTTTTCAATTGGACGTAATTAGTCCTACGGCTAAAAATACGCAAACA 780
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      TAGTACCTCCAGTTTGGAAAGACTTGTANCGTGGGCACACGAGAAGCAACCTTCAAGAGC 763
                                                                                  

consensus_7727#0      ACACTGGATGCTGCTAGTAACGAGACAGTGAACCAAAAGGATGAACGAGATACAGCTCCA 840
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      AGTTACAACACTANCCTTAAAGNCGCTCCCCNACGCTTCTATGGNTAACCGGCGTTTGNT 823
                                                                                  

consensus_7727#0      CACATTCCACAGCGAAGGC--TTGATCGTCAAATTAACGAAGATGTCCGCCGTATGATGG 898
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      GCGGTTAAGTGCTNTGGTCCGTGGTTANCCTTGTTAACCTANACACCAACAACCCCAAGT 883
                                                                                  

consensus_7727#0      GGGAATTATTTGCTAACCTTGAAACGGAAATAAACAATTTTATCTTGAGTTTTGAAAAAC 958
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      TGGGATNCGTAACGATTGGGTTCCCGCGGAGCACCCCCCAATATGAACGCGGACCAAACA 943
                                                                                  

consensus_7727#0      TAGATAACTACTACTCATTGTACGTGCTAGTGCGTCTTACACAACATGTAATGTCGGCCC 1018
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      CAAACNANAACCCCGCTTCTTNTACCNTTACAGGCCGTACGCTTGAACCACGGGCATAAC 1003
                                                                                  

consensus_7727#0      AAGACGCACAGTCCTTTCTAAGCATGACGTTTGCTTCAGCTCTTATACACGTGAAACGAA 1078
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      TATGTGGACCGCATTGTNCACAGAGACCCACTTCCCTTNGTGTAACTTANCCACCCCGCG 1063
                                                                                  

consensus_7727#0      GCTTTGATAAATTTATGCAATCACAGTTGCAGTCAATTGATGAATCTAAGCTTCCGAAGC 1138
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      NTAGTNA----------------------------------------------------- 1070
                                                                                  

consensus_7727#0      GCTCTAAATGTGGCCTTCTACCTTACGTGGAAAACTTTGAAGAATTCGCCGTAACCGCTG 1198
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      AAAACATTTTTAAGAAAACGGAGCGCCGAAATGATCTTGATAAATGGTACCTTAAACTGG 1258
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      TGGAAGCAATTTTCGAACGCATTCCTGTGCACGCCGCCGAACATTCAAAAACGCCGCACC 1318
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      AAGTAGTAAAAATGGAAAACTATCATCGNAATGCACTCCACGTTTATCTCAACTAAAGAT 1378
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      TCCAGTTTTGGAATCATTGCGAAAGGAAGCAAAAACACGATATAATGATGCACAGAAAGC 1438
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      ATACGTTACTAAATACTTTGGCCGGCCGCTAGAACGACTAAACCAATTTTTCGAAGGAAT 1498
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      ACAAGTGCGTGTGCAGCAAGGTGTGAAAGATACCGAAATTAGCTACCAAATGGCGTACTC 1558
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      TAAGCAAGAATTACGTAAAGTAATAAGTCTTTATCCAGCCCGTGAAGTAAAGAAGGGACT 1618
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      TGAGCAACTGTACAAAAAGGTAGAAAAACATCTTTGTGAGGAAGAAAACTTGCTACAAGT 1678
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      AGTGTGGCGAGCTATGCAGCAGGAATTTATAAACCAATACAACTCATTAGAGCAATGGAT 1738
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      CCAACGTTGTTATGCCGGTTCAATGATAACTCTAGAGTTTACCATCAACGACCTGTTGGA 1798
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      TTTTTTCTCTGAGATAGCACAGTCACATTAGGCCGAAGAAGAGCTCCAGGACATAATTAA 1858
consensus_7727#2      ------------------------------------------------------------
consensus_7727#1      ------------------------------------------------------------
                                                                                  

consensus_7727#0      AACGTTTATTAAACAGCCCATCCATACAAGTCGAAGAGTGCTTCGGTTTTAATAAACT 1916
consensus_7727#2      ----------------------------------------------------------
consensus_7727#1      ----------------------------------------------------------
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)