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Anopheles gambiae
cluster # 7731 cluster # 7731       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7731#0 length = 2118 sequences # 2  
consensus_7731#1 length = 936 sequences # 5  
consensus_7731#2 length = 716 sequences # 1  

consensusID : consensus_7731#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2118
fasta sequence
                              [TCGCGTCGACGTCGAACAGAAACTCGACACGATGAAGCTCCTCATCCTGGCGGTGGAGATCTCCCTGGCAGTTCTTGCCAGCGGATCTTACGTTCCAAGCACCAAGTTCGAAGCGAAATATGCCGACAAGGAGTTCTTGTTCAAGCAGAAGTTCTTCTTCGAAGTGCTCCGCAACATTCACCTGCCGCTCAAGTATGACGAATACATCCCGTACACCAAGACCTGGGTGTCTGATGAGACCAAGTACAACGACTTTGCTCAAGTGGCCGAGTTCTTTGACTATTACAAGACTGGTGCCTTCCTAGAGAAGGGCGAGCTCTTCTCCATCTACAACGAGCAGTACCTGCGCCAGACCTACGCTGTGTTCACCTTCCTGTACAACAGCGCCGACTGGGACACGTACTACAAGAACATGATCTGGGCCCGTGACAACATCAACGAGGGCATGTTCATCTACGTGCTGCACCTGACGGTGATGCACCGACCGGACCTGCAGGGCATCGTTCTGCCAGCCATATACGAGATTTACCCGTACTACTTCTTCAACACCGATGTGATCCGCACCATCAACTACAAGAAGCTGTACGATCCCAAGTTCGGTTTCTATGGCAACGGCAAGTACAACATCGTGTACGCTAACTACACCGCTACCTACCCGATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTATAACACCGAGGATATTGGCCTGAACGCTTACTACTACTACTTCATGATGGACTATTCGTTCCTCCTGGGTGGTGACAAGTTCGGACTGATCAAGGACCGTCGTGGAGAGCTGTACTGGTACATGCACCAGATGCTGCTCGCCCGCTACAACCTGGAGCGTATGTCCAACTACATGGGTACGGTCAAGCCGCTGGTCTGGCGCTTCCCGCTCAAGACTGGATACTTCTCGCTGCTCAGCTACTGGAACGGAGTGCCGTTCAAGAGCCGTGACTACAACTACATGATCTCGGACGAGTCGTACTACAAGCTGGACTGGATCAACGCCTGGGAAGCGAAGATCCGCAAGATCATTGAGGATGGATTCTTCGTCAAGGAAGACGGCACCCGCATCAACCTCCGTCTGCCGGAGTCGGTCGAGTTCTTCGGAAACCTGCTCAACTCCAACGTTGACAGTGTGGATGCCAACTACGTCGGCTACATCGAGGTCTTCTCTCGCCTGCTGCTCTCCGGAAACGACTTCAACGCCTACAAGGTCTGGCCGTCGGCACTGATGCAGTTCGAGACGAGCCTGCGCGACCCGGTCTTCTACCAGCTGTACGAGCGCTTCATGGATCTGTACTACTACTTCAAGCGTTTCCTGCCAAGCTACACTTACGAGGAGCTCAACTTCAACGGTGTCGTCATCAAGGATGTCACCTTCGACAAGCTGATGACCTACTTCGACTACTTCGACTCGGATGTCTCCAACGTTCTGCCCATGCAGTCGACTGACAAGTACTTCGACTATGCCGTGTTCGCGCGCCAGCGTCGCCTCAACCACAAGCCGTTCAGCTACACCATGAACGTCATGTCGGACTATACCGGCAAGGCCATCATTCGCGCGTTTGTCGGACCCAAGTTCGATCGCTTCTTCGATCTGCAGTTCTACAAGAAGTACTTCTTCGAGATTGACCAGTATCTGGTCGACTTCACCGCCGGCAAGAATACCTCTGTGCGTAACTCGCGCGACTTCTACTGGAGCGTCAAGGATCGTACCATGTACACCGACCTGTACAAGAAGATC-ATGCTCGGATACAACGGACAGGAGAAGTTCGCCCTGGACATGTCGGAGGCCCACTGTGGATTCCCGGATCGTCTGATCTTGCCGAAGGGCTGGACCAGCGGTATGCCGATGCAGTTCTACTTCATCATCACGCCGTACACGGCCAAGACCTACGAGCAGGGCTACCAGTACGACAAGACCTTTACTTGCGGCGTCGAGTCGGGAATGCGCTTCTACGACAGCCTGCCGTTCGGATATCCGTTCGATCGCGTCATCAACTTCAACTACTTCTACACCAAGAACATGTACTTCAAGGATGTGTTCATCTTCCACACCGAAGAGATGAAAATGAACCAGAGGTACTAAAAGGTCGA]

[+] EMBL AG51225              [TCGCGTCGACGTCGAACAGAAACTCGACACGATGAAGCTCCTCATCCTGGCGGTGGAGATCTCCCTGGCAGTTCTTGCCAGCGGATCTTACGTTCCAAGCACCAAGTTCGAAGCGAAATATGCCGACAAGGAGTTCTTGTTCAAGCAGAAGTTCTTCTTCGAAGTGCTCCGCAACATTCACCTGCCGCTCAAGTATGACGAATACATCCCGTACACCAAGACCTGGGTGTCTGATGAGACCAAGTACAACGACTTTGCTCAAGTGGCCGAGTTCTTTGACTATTACAAGACTGGTGCCTTCCTAGAGAAGGGCGAGCTCTTCTCCATCTACAACGAGCAGTACCTGCGCCAGACCTACGCTGTGTTCACCTTCCTGTACAACAGCGCCGACTGGGACACGTACTACAAGAACATGATCTGGGCCCGTGACAACATCAACGAGGGCATGTTCATCTACGTGCTGCACCTGACGGTGATGCACCGACCGGACCTGCAGGGCATCGTTCTGCCAGCCATATACGAGATTTACCCGTACTACTTCTTCAACACCGATGTGATCCGCACCATCAACTACAAGAAGCTGTACGATCCCAAGTTCGGTTTCTATGGCAACGGCAAGTACAACATCGTGTACGCTAACTACACCGCTACCTACCCGATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTATAACACCGAGGATATTGGCCTGAACGCTTACTACTACTACTTCATGATGGACTATTCGTTCCTCCTGGGTGGTGACAAGTTCGGACTGATCAAGGACCGTCGTGGAGAGCTGTACTGGTACATGCACCAGATGCTGCTCGCCCGCTACAACCTGGAGCGTATGTCCAACTACATGGGTACGGTCAAGCCGCTGGTCTGGCGCTTCCCGCTCAAGACTGGATACTTCTCGCTGCTCAGCTACTGGAACGGAGTGCCGTTCAAGAGCCGTGACTACAACTACATGATCTCGGACGAGTCGTACTACAAGCTGGACTGGATCAACGCCTGGGAAGCGAAGATCCGCAAGATCATTGAGGATGGATTCTTCGTCAAGGAAGACGGCACCCGCATCAACCTCCGTCTGCCGGAGTCGGTCGAGTTCTTCGGAAACCTGCTCAACTCCAACGTTGACAGTGTGGATGCCAACTACGTCGGCTACATCGAGGTCTTCTCTCGCCTGCTGCTCTCCGGAAACGACTTCAACGCCTACAAGGTCTGGCCGTCGGCACTGATGCAGTTCGAGACGAGCCTGCGCGACCCGGTCTTCTACCAGCTGTACGAGCGCTTCATGGATCTGTACTACTACTTCAAGCGTTTCCTGCCAAGCTACACTTACGAGGAGCTCAACTTCAACGGTGTCGTCATCAAGGATGTCACCTTCGACAAGCTGATGACCTACTTCGACTACTTCGACTCGGATGTCTCCAACGTTCTGCCCATGCAGTCGACTGACAAGTACTTCGACTATGCCGTGTTCGCGCGCCAGCGTCGCCTCAACCACAAGCCGTTCAGCTACACCATGAACGTCATGTCGGACTATACCGGCAAGGCCATCATTCGCGCGTTTGTCGGACCCAAGTTCGATCGCTTCTTCGATCTGCAGTTCTACAAGAAGTACTTCTTCGAGATTGACCAGTATCTGGTCGACTTCACCGCCGGCAAGAATACCTCTGTGCGTAACTCGCGCGACTTCTACTGGAGCGTCAAGGATCGTACCATGTACACCGACCTGTACAAGAAGATC ATGCTCGGATACAACGGACAGGAGAAGTTCGCCCTGGACATGTCGGAGGCCCACTGTGGATTCCCGGATCGTCTGATCTTGCCGAAGGGCTGGACCAGCGGTATGCCGATGCAGTTCTACTTCATCATCACGCCGTACACGGCCAAGACCTACGAGCAGGGCTACCAGTACGACAAGACCTTTACTTGCGGCGTCGAGTCGGGAATGCGCTTCTACGACAGCCTGCCGTTCGGATATCCGTTCGATCGCGTCATCAACTTCAACTACTTCTACACCAAGAACATGTACTTCAAGGATGTGTTCATCTTCCACACCGAAGAGATGAAAATGAACCAGAGGTACTAAAAGGTCGA]
[+] EMBL AG50475              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGATCCGCAAGATCATTGAGGATGGATTCTTCGTCAAGGAAGACGGCACCCGCATCAACCTCCGTCTGCCGGAGTCGGTCGAGTTCTTCGGAAACCTGCTCAACTCCAACGTTGACAGTGTGGATCGCAACTACGTCGGCTACATCGAGGTGTTCTCTCGCCTGCTGCTCTCCGGAAACGACTTCAACGCCTACAAGGTCTGGCCGTCGGCACTGATGCAGTTCGAGACGAGCCTGCGCGACCCGGTCTTCTACCAGCTGTACGAGCGCTTCATGGATCTGTACTACTACTTCAAGCGTTTCCTGCCAAGCTACACTTACGAGGAGCTCAACTTCAACGGTGTCGTCATCAAGGATGTCACCTTCGACAAGCTGATGACCTACTTCGACTACTTCGACTCGGATGTCTCCAACGTTCTGCCCATGCAGTCGGCTGACAAGTACTTCGACTATGCCGTGTTCGCGCGCCAGCGTCGCCTCAACCACAAGCCGTTCAGCTACACCATGAACGTCATGTCGGACTATACCGGCAAGGCCATCATTCGCGCGTTTGTCGGACCCAAGTTCGATCGCTTCTTCGATCTGCAGTTCTAC AG AGTACTTCTTCGAGATTGATCAGTATCTGGTCGACTTCACCGCCGGCAAGAACACCTTCGTGCGTAACTCGCGCGACTTCTACTGGAGCGTCAAGGATCGTACCATGTACACCGACCTGTACAAGAAGATCAATGCTCGGATACAATGGACA                                                                                                                                                                                                                                                                                                                                             ]


>consensus_7731#0 TCGCGTCGACGTCGAACAGAAACTCGACACGATGAAGCTCCTCATCCTGGCGGTGGAGAT CTCCCTGGCAGTTCTTGCCAGCGGATCTTACGTTCCAAGCACCAAGTTCGAAGCGAAATA TGCCGACAAGGAGTTCTTGTTCAAGCAGAAGTTCTTCTTCGAAGTGCTCCGCAACATTCA CCTGCCGCTCAAGTATGACGAATACATCCCGTACACCAAGACCTGGGTGTCTGATGAGAC CAAGTACAACGACTTTGCTCAAGTGGCCGAGTTCTTTGACTATTACAAGACTGGTGCCTT CCTAGAGAAGGGCGAGCTCTTCTCCATCTACAACGAGCAGTACCTGCGCCAGACCTACGC TGTGTTCACCTTCCTGTACAACAGCGCCGACTGGGACACGTACTACAAGAACATGATCTG GGCCCGTGACAACATCAACGAGGGCATGTTCATCTACGTGCTGCACCTGACGGTGATGCA CCGACCGGACCTGCAGGGCATCGTTCTGCCAGCCATATACGAGATTTACCCGTACTACTT CTTCAACACCGATGTGATCCGCACCATCAACTACAAGAAGCTGTACGATCCCAAGTTCGG TTTCTATGGCAACGGCAAGTACAACATCGTGTACGCTAACTACACCGCTACCTACCCGAT GGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTATAACACCGAGGATATTGG CCTGAACGCTTACTACTACTACTTCATGATGGACTATTCGTTCCTCCTGGGTGGTGACAA GTTCGGACTGATCAAGGACCGTCGTGGAGAGCTGTACTGGTACATGCACCAGATGCTGCT CGCCCGCTACAACCTGGAGCGTATGTCCAACTACATGGGTACGGTCAAGCCGCTGGTCTG GCGCTTCCCGCTCAAGACTGGATACTTCTCGCTGCTCAGCTACTGGAACGGAGTGCCGTT CAAGAGCCGTGACTACAACTACATGATCTCGGACGAGTCGTACTACAAGCTGGACTGGAT CAACGCCTGGGAAGCGAAGATCCGCAAGATCATTGAGGATGGATTCTTCGTCAAGGAAGA CGGCACCCGCATCAACCTCCGTCTGCCGGAGTCGGTCGAGTTCTTCGGAAACCTGCTCAA CTCCAACGTTGACAGTGTGGATGCCAACTACGTCGGCTACATCGAGGTCTTCTCTCGCCT GCTGCTCTCCGGAAACGACTTCAACGCCTACAAGGTCTGGCCGTCGGCACTGATGCAGTT CGAGACGAGCCTGCGCGACCCGGTCTTCTACCAGCTGTACGAGCGCTTCATGGATCTGTA CTACTACTTCAAGCGTTTCCTGCCAAGCTACACTTACGAGGAGCTCAACTTCAACGGTGT CGTCATCAAGGATGTCACCTTCGACAAGCTGATGACCTACTTCGACTACTTCGACTCGGA TGTCTCCAACGTTCTGCCCATGCAGTCGACTGACAAGTACTTCGACTATGCCGTGTTCGC GCGCCAGCGTCGCCTCAACCACAAGCCGTTCAGCTACACCATGAACGTCATGTCGGACTA TACCGGCAAGGCCATCATTCGCGCGTTTGTCGGACCCAAGTTCGATCGCTTCTTCGATCT GCAGTTCTACAAGAAGTACTTCTTCGAGATTGACCAGTATCTGGTCGACTTCACCGCCGG CAAGAATACCTCTGTGCGTAACTCGCGCGACTTCTACTGGAGCGTCAAGGATCGTACCAT GTACACCGACCTGTACAAGAAGATCATGCTCGGATACAACGGACAGGAGAAGTTCGCCCT GGACATGTCGGAGGCCCACTGTGGATTCCCGGATCGTCTGATCTTGCCGAAGGGCTGGAC CAGCGGTATGCCGATGCAGTTCTACTTCATCATCACGCCGTACACGGCCAAGACCTACGA GCAGGGCTACCAGTACGACAAGACCTTTACTTGCGGCGTCGAGTCGGGAATGCGCTTCTA CGACAGCCTGCCGTTCGGATATCCGTTCGATCGCGTCATCAACTTCAACTACTTCTACAC CAAGAACATGTACTTCAAGGATGTGTTCATCTTCCACACCGAAGAGATGAAAATGAACCA GAGGTACTAAAAGGTCGA



consensusID : consensus_7731#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 936
fasta sequence
                              [CCGCTCAGCGTCGTGCAAACATAAACCAACCCATTTTATAAGCTCCCCAAAAAATCGTTCCACAATTTGCGCTGCAATCGTGACAATATTTGGTGTAAAAACATCGACTCTCCATTTTCCGATGACCAAAACCCAGCACTTCGTGCCAATCGGGGGCGCTTTGACGTGCCAGTTTGACGTTTGCTGCGTGCGTGATTGAAACAAAAAGCGACGTTCAAGTCCATTTTCCCATTTTCCCGTTTTCGTTTTACGTTGTTACGCTAGACAGTAGAAAAAACCTCCACAGAACGGTGTGGCAAAAGGAAAGTTTTTTTTAAATAATTTCATCTTTCGTCGGCTTTATTACCAACTCCGGAACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCCTCTGCCGCGTTGTTCGCTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATATCGCATACGCGAATCGAAGCAAGGAGCACCACCACCGCCGTGTTACCGCCACCTTCAGATCCGTTCTCGCCTTTCGCCTTGACTCAATTGTTCCGTGCTTCGAGCCAGTTCTTCAACCGCGGCGACCGCGAACCCAGCTGCATGCGAATTGATTCTAGGGCTCGTGTGAAAGTGTCGGATTTGGAAATCGTGCACTGCCGGGTGTGAATTGTACGCTTTGTGAGGACCTCGCCGCGAACGGAGTGTTTTTTTCTCTCTCCCGTTTGCACCTCGCCCTGACAGATCACAAAGCAACCGTGTAGTGTCGACGACCCGGACTCCCCACAGCAGCAGCAGCAAATTCAGTGCCCAAAGTCCAACGAAGCAACAGCAGCAGCAGAGATGGCGAAAACGTACGACTATCTGTTCAAACTTTTACTGATCGGCGATTCCGGCGTCGGCAAAACCTGCATACTGGTT]

[+] EMBL BM587912             [CCGCTCAGCGTCGTGCAAACATAAACCAACCCATTTTATAAGCTCCCCAAAAAATCGTTCCACAATTTGCGCTGCAATCGTGACAATATTTGGTGTAAAAACATCGACTCTCCATTTTCCGATGACCAAAACCCAGCACTTCGTGCCAATCGGGGGCGCTTTGACGTGCCAGTTTGACGTTTGCTGCGTGCGTGATTGAAACAAAAAGCGACGTTCAAGTCCATTTTCCCATTTTCCCGTTTTCGTTTTACGTTGTTACGCTAGACAGTAGAAAAAACCCCCACAGAACGGTGTGGCAAAAGGAAAGTTTTTTTTTAATAATTTCATCTTTCGTTGGCTTTA CACCAACTCCGGAACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCCTCTGCCGCGTTGTTCACTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATATCGCATACGCGAATCGAAGCAAGGAGCACCACCACCGCCGTGTTACCGCCACCTTCAGATCCGTTCTCGCCTTTCGCCTTGACTCAATTGTTCCGTGCTTCGAGCCAGTTCTTCAACCGCGGCGACCGCGAACCCAGCTGCATGCGAATTGATTCTAGGGCTCGTGTGAAAGTGTCGGATTTGGAAAT                                                                                                                                                                                                                                                                               ]
[+] EMBL BM630723             [                                                                                                                                                                                                                                     CATTTTCCCGTTTTCGTTTTACGTTGTTACGCTAGACAGTAGAAAAAACCTCCACAGAACGGTGTGGCAAAAGGAAAGTTTTTTTTAAATAATTTCATCTTTCGTCGGCTTTATTACCAACTCCGGAACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCCTCTGCCGCGTTGTTCGCTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATATCGCATACGCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AGA284860            [                                                                                                                                                                                                                                              tTTTTTTTTTTACGTTGTTACGCTAGACAGTAGAAAAAACCTCCACAGAACGGTGTGGCAAAAGGAAAGTTTTTTTTAAATAATTTCATCTTTCGTCGGCTTTATTACCAACTCCGGAACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCCTCTGCCGCGTTGTTCGCTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM609356             [                                                                                                                                                                                                                                                        ccgGTTGTTACGCTAGACAGTAGAAAAAACCCCCACAGAACGGTGTGGCAAAAGGAAAGTTTTTTTTTAATAATTTCATCTTTCGTTGGCTTTA CACCAACTCCGGAACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCCTCTGCCGCGTTGTTCACTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATATCGCATACGCGAATCGAAGCAAGGAGCACCACCACCGCCGTGTTACCGCCACCTTCAGATCCGTTCTCGCCTTTCGCCTTGACTCAATTGTTCCGTGCTTCGAGCCAGTTCTTCAACCGCGGCGACCGCGAACCCAGCTGCATGCGAATTGATTCTAGGGCTCGTGTGAAAGTGTCGGATTTGGAAATCGTGCACTGCCGGGTGTGAATTGTACGCTTTGTGAGGACCTCGCCGCGAACGGAGTGTTTTTTTCTCTCTCCCGTTTGCACCTCGCCCTGACAGATCACAAAGCAACCGTGTAGTGTCGACGACCCGGACTCCCCACAGCAGCAGCAGCAAATTCAGTGCCCAAAGTCCAACGAAGCAACAGCAGCAGCAGAGATGGCGAAAACGTACGACTATCTGTTCAAACTTTTACTGATCGGCGATTCCGGCGTCGGCAAAACCTGCATACTGGTT]
[+] EMBL BX604435             [                                                                                                                                                                                                                                                                            TAGAAAAAACCTCCACAGAACGGTGTGGCAAAAGGAAAGTTTTTTTTAAATAATTTCATCTTTCGTCGGCTTTATTACCAACTCCGGAACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCCTCTGCCGCGTTGTTCGCTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATATCGCATACGCGAATCGAAGCAAGGAGCACCACCACCGCCGTGTTACCGCCACCTTCAGATCCGTTCTCGCCTTTCGCCTTGACTCGATTGTTCCGTGCTTCGAGCCAGTTCTTCAACCGCGGCGACCGCGAACCCAGCTGCATGCGAATTGATTCTAGGGCTCGTGTGAAAGTGTCGGATTTGGAAATCGTGCACTGCCGGGTGTGAATTGTACGCTTTGTGAGGACCTCGCCGCGAACGGAGTGTTTTTTTCTCTCTCCCGTTTGCACCTCGCCCTGACAGATCACAAAGCAACCGTGTAGTGTCGACGACCCGGACTCCCCACAGCAGCAGCAGCAAATTCAGTGCCCCAAGTCCAACGAAGCAACAGCAGCAGCAGAGATGGCGAAAACGTACGACTATCTGTTCAAACT                                              ]


>consensus_7731#1 CCGCTCAGCGTCGTGCAAACATAAACCAACCCATTTTATAAGCTCCCCAAAAAATCGTTC CACAATTTGCGCTGCAATCGTGACAATATTTGGTGTAAAAACATCGACTCTCCATTTTCC GATGACCAAAACCCAGCACTTCGTGCCAATCGGGGGCGCTTTGACGTGCCAGTTTGACGT TTGCTGCGTGCGTGATTGAAACAAAAAGCGACGTTCAAGTCCATTTTCCCATTTTCCCGT TTTCGTTTTACGTTGTTACGCTAGACAGTAGAAAAAACCTCCACAGAACGGTGTGGCAAA AGGAAAGTTTTTTTTAAATAATTTCATCTTTCGTCGGCTTTATTACCAACTCCGGAACGG TGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCACCCGTGTGTTGGTGTGTTATCC TCTGCCGCGTTGTTCGCTTGCTATTAGCAAGTTTTCATCGTCATCGGACTCATCATATCG CATACGCGAATCGAAGCAAGGAGCACCACCACCGCCGTGTTACCGCCACCTTCAGATCCG TTCTCGCCTTTCGCCTTGACTCAATTGTTCCGTGCTTCGAGCCAGTTCTTCAACCGCGGC GACCGCGAACCCAGCTGCATGCGAATTGATTCTAGGGCTCGTGTGAAAGTGTCGGATTTG GAAATCGTGCACTGCCGGGTGTGAATTGTACGCTTTGTGAGGACCTCGCCGCGAACGGAG TGTTTTTTTCTCTCTCCCGTTTGCACCTCGCCCTGACAGATCACAAAGCAACCGTGTAGT GTCGACGACCCGGACTCCCCACAGCAGCAGCAGCAAATTCAGTGCCCAAAGTCCAACGAA GCAACAGCAGCAGCAGAGATGGCGAAAACGTACGACTATCTGTTCAAACTTTTACTGATC GGCGATTCCGGCGTCGGCAAAACCTGCATACTGGTT



consensusID : consensus_7731#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 716
fasta sequence
                              [TAATATTCTTCACACGATGTGATCGCACATCAACTACAAGAAGCTGTACGATCCCAAGTTCGGTTTCTATGGCAACGGCAAGTACAACGTCGTGTACGCTAACTACACCGCTACCTACCCGATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTACTACACCGAGAACGGATCTGAAGGTGGCGGTAACACGGTGGTGGTGGTGCTCCTTGCTTCGATTCGCGTATGCGATATGATGAGTCCNGATGACGATGAAAACTTGCTAATAGCAAGCGAACAACGCGGCAGAGGATAACACACCAACACACGGGTGCTGGCAAAGTTTCGACAGGCTGTGCGAGCCTACGCACCGTCTCCGGAGTTGATGTAAAGCCGACGANAGATGAAATTATTTAAAAAACAAACTTTCCTTTTGCCACACCGTTCTGTGGAGGTTCTTTCTACTGTCTAGCGTAACAACGTACAACGAAAACGGGAAAATGGGAAAACTGGCACTTGACACGTCAGCTTGANCGTNTCAAGTCACGCACGCAGCAAACGGTCAAACTGGCCACGTCAAAGGCGCCCCCGATTGGCACGAAGTGCCTGCGTTTAGGTCATCGGGAAAACGGAGAGNTCNATGTTNTGTACACCCAACAGNTATTGTCCNATTGCAGGCGCCCAATTGTGGANACGAATTATGTCGGGAAGCTATCAAAGGGCTGGTC]

[+] EMBL AL933707             [TAATATTCTTCACACGATGTGATCGCACATCAACTACAAGAAGCTGTACGATCCCAAGTTCGGTTTCTATGGCAACGGCAAGTACAACGTCGTGTACGCTAACTACACCGCTACCTACCCGATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTACTACACCGAGAACGGATCTGAAGGTGGCGGTAACACGGTGGTGGTGGTGCTCCTTGCTTCGATTCGCGTATGCGATATGATGAGTCCNGATGACGATGAAAACTTGCTAATAGCAAGCGAACAACGCGGCAGAGGATAACACACCAACACACGGGTGCTGGCAAAGTTTCGACAGGCTGTGCGAGCCTACGCACCGTCTCCGGAGTTGATGTAAAGCCGACGANAGATGAAATTATTTAAAAAACAAACTTTCCTTTTGCCACACCGTTCTGTGGAGGTTCTTTCTACTGTCTAGCGTAACAACGTACAACGAAAACGGGAAAATGGGAAAACTGGCACTTGACACGTCAGCTTGANCGTNTCAAGTCACGCACGCAGCAAACGGTCAAACTGGCCACGTCAAAGGCGCCCCCGATTGGCACGAAGTGCCTGCGTTTAGGTCATCGGGAAAACGGAGAGNTCNATGTTNTGTACACCCAACAGNTATTGTCCNATTGCAGGCGCCCAATTGTGGANACGAATTATGTCGGGAAGCTATCAAAGGGCTGGTC]


>consensus_7731#2 TAATATTCTTCACACGATGTGATCGCACATCAACTACAAGAAGCTGTACGATCCCAAGTT CGGTTTCTATGGCAACGGCAAGTACAACGTCGTGTACGCTAACTACACCGCTACCTACCC GATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTACTACACCGAGAACGG ATCTGAAGGTGGCGGTAACACGGTGGTGGTGGTGCTCCTTGCTTCGATTCGCGTATGCGA TATGATGAGTCCNGATGACGATGAAAACTTGCTAATAGCAAGCGAACAACGCGGCAGAGG ATAACACACCAACACACGGGTGCTGGCAAAGTTTCGACAGGCTGTGCGAGCCTACGCACC GTCTCCGGAGTTGATGTAAAGCCGACGANAGATGAAATTATTTAAAAAACAAACTTTCCT TTTGCCACACCGTTCTGTGGAGGTTCTTTCTACTGTCTAGCGTAACAACGTACAACGAAA ACGGGAAAATGGGAAAACTGGCACTTGACACGTCAGCTTGANCGTNTCAAGTCACGCACG CAGCAAACGGTCAAACTGGCCACGTCAAAGGCGCCCCCGATTGGCACGAAGTGCCTGCGT TTAGGTCATCGGGAAAACGGAGAGNTCNATGTTNTGTACACCCAACAGNTATTGTCCNAT TGCAGGCGCCCAATTGTGGANACGAATTATGTCGGGAAGCTATCAAAGGGCTGGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7731#0      TCGCGTCGACGTCGAACAGAAACTCGACACGATGAAGCTCCTCATCCTGGCGGTGGAGAT 60
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      CTCCCTGGCAGTTCTTGCCAGCGGATCTTACGTTCCAAGCACCAAGTTCGAAGCGAAATA 120
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TGCCGACAAGGAGTTCTTGTTCAAGCAGAAGTTCTTCTTCGAAGTGCTCCGCAACATTCA 180
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      CCTGCCGCTCAAGTATGACGAATACATCCCGTACACCAAGACCTGGGTGTCTGATGAGAC 240
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      CAAGTACAACGACTTTGCTCAAGTGGCCGAGTTCTTTGACTATTACAAGACTGGTGCCTT 300
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      CCTAGAGAAGGGCGAGCTCTTCTCCATCTACAACGAGCAGTACCTGCGCCAGACCTACGC 360
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TGTGTTCACCTTCCTGTACAACAGCGCCGACTGGGACACGTACTACAAGAACATGATCTG 420
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      -----------------------------------------------------CCGCTCA 7
                                                                                  

consensus_7731#0      GGCCCGTGACAACATCAACGAGGGCATGTTCATCTACGTGCTGCACCTGACGGTGATGCA 480
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      GCGTCGTGCAAACATAAACCAACCCAT-----TTTATAAGCTCCCCAAAAAATCGTTCCA 62
                                                                                  

consensus_7731#0      CCGACCGGACCTGCAGGGCATCGTTCTGCCAGCCATATACGAGATTTACCCGTACTAC-T 539
consensus_7731#2      ----------------------------------------------------TAATA--T 6
consensus_7731#1      CAATTTGCGCTGCAATCGTGACAATATTTGGTGTAAAAACATCGACTCTCCATTTTCCGA 122
                                                                          *  *    

consensus_7731#0      TCTTCAACACCGATGTGATCCGCACC-ATCAACTACAAGAAGCTGTACGATCCCAA-GTT 597
consensus_7731#2      TCTTCA-CAC-GATGTGATC-GCAC--ATCAACTACAAGAAGCTGTACGATCCCAA-GTT 60
consensus_7731#1      TGACCAAAACCCA-GCACTTCGTGCCAATCGGGGGCGCTTTGACGTGCCAGTTTGACGTT 181
                      *   **  **  * *   *  *  *  ***     *     *  ** * *     * ***

consensus_7731#0      CGGTTTCTATGGCAACGGCAAGTACAACATCGTGTACGCTAACTACACCGCTACCTACCC 657
consensus_7731#2      CGGTTTCTATGGCAACGGCAAGTACAACGTCGTGTACGCTAACTACACCGCTACCTACCC 120
consensus_7731#1      TGCTGCGTGCGTGATTGAAACAAAAAGCGACGTTCAAGTCCATTTTCCCATTTTCCCGTT 241
                       * *   *  *  *  *  *   * * *  ***  * *   * *   **  *  *     

consensus_7731#0      GATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTATAACACCGAGGATAT 717
consensus_7731#2      GATGGACTACTACAACAACTTCTACACCGAGGAGTACCTCAACTACTACACCGAGAACG- 179
consensus_7731#1      TTCGTTTTACGTTGTTACGCTAGACAGTAGAAAAAACCTCCAC-AGAACGGTGTGGCAAA 300
                         *   ***      *   *  ***      *  ***** ** *  **   * *     

consensus_7731#0      TGGCCTGAACGCTTACTACTACTACTTCATGATGGACTATTCGTTCCTCCTGGGTGGTGA 777
consensus_7731#2      -GATCTGAA-GGTGGCGGTAACACGGTGGTGGTGG--TGCTCCTTGCTTCGATTCGCGTA 235
consensus_7731#1      AGG---AAAGTTTTTTTTAAATAATTTCATCTTTCG-TCGGCTTTATTACCAACTCCGGA 356
                       *     **   *       *     *  *  *    *   * **  * *         *

consensus_7731#0      CAAGTTCGGACTGATCAAGGACCGTCGTGGAGAGCTG-TACTGGTACATGCACCAGATGC 836
consensus_7731#2      TGCGATATGATGAGTCCNG-ATGACGATGAAAACTTGCTAATAGCAAGCGAACAA----- 289
consensus_7731#1      -ACGGTGCGTAGGCTCGCACAGCCTGTCGAAACTTTGCCAGCA-CCCGTGTGTTGG---- 410
                         * *  *     **    *       * *    **  *         *          

consensus_7731#0      TGCTCGCCCGCTACAACCTGGAGCGTATGTCCAACTACATGGGTACGGTCAAGCCGCTGG 896
consensus_7731#2      --------CGCGGCAGAGGATAACACA---CCAAC-ACACGGGTGCTGGCAAAGT-TTCG 336
consensus_7731#1      ------TGTGTTATCCTCTGCCGCGTTGTTCGCTTGCTATTAGCAAGTTTTCATC-GTCA 463
                               *             *      *       *   *              *  

consensus_7731#0      TCTGGCGCTTCCCGCTCAAG-ACTGGATACTTC-TCGCTGCTCAGCTACTGGAACGG-AG 953
consensus_7731#2      ACAGGCTGTGCGAGCCTACGCACCGTCTCCGGAGTTGATGTAAAGCCGACGANAGAT-GA 395
consensus_7731#1      TCGGACTCATCATATCGCATACGCGAATCGAAGCAAGGAGCACCACCACCGCCGTGTTAC 523
                       * * *    *             *  *        *  *     *    *         

consensus_7731#0      TGCCGT-TCAAGAGCCG----TGACTACAACTACATGATCTCG-GACGAGTCGTACTACA 1007
consensus_7731#2      AATTAT-TTAAAAAACAAACTTTCCTTTTGCCACACCGTTCTGTGGAGGTTCTTTCTACT 454
consensus_7731#1      CGCCACCTTCAGATCCG---TTCTCGCCTTTCGCCTTGACTCA-ATTGTTCCGTGCTTCG 579
                             *  * *  *     *  *        *             *   * * ** * 

consensus_7731#0      AGCTGGACTGGATCAACGCCTGGGAAGCGAAGATCCGCAAGATCATTGAGGATGGATTCT 1067
consensus_7731#2      GTCTAG--CGTAACAACGTAC----AACGAAAA-CGGGAAAATGG--GAAAACTGGCACT 505
consensus_7731#1      AGCCAG--TTCTTCAAC-CGCGGCGACCGCGAACCC---AGCTGCATGCGAATTGATTCT 633
                        *  *       ****        * **   * *    *  *    *   *  *   **

consensus_7731#0      TCGTCAAGGAAGACGGCACCCGCATCAACCTCCGTCTGCCGGAGTCGGTCGAGTT----- 1122
consensus_7731#2      T-GACACGTCAGCTTGAN--CGTNTCAAGTCACGCACGCAGCAAACGGTCAAACTGGCCA 562
consensus_7731#1      AGGGCTCGTGTGAAAGTGTCGGATTTGGAAATCGTGCACTGCCGGGTGT-GAATTGTACG 692
                        * *  *   *   *     *  *       **    * *      **  *  *     

consensus_7731#0      CTTCGGAAACCTGCTCAACTCCAACGTTGACAGTGTGGATGCCAACTACGTCGGCTACAT 1182
consensus_7731#2      CGTCAAAGGCGCCCCCGATTGGCACGA----AGTGCCTGCGTTTAGGTCATCGGGAAAAC 618
consensus_7731#1      CTTTGTGAGGAC-CTCGCCGCGAACGG----AGTGTTTTTTTCT-CTCTCCCGTTTGCAC 746
                      * *          * *       ***     ****                **     * 

consensus_7731#0      CGAGGTCTTCTCTCGCCTGCTGCTCTCCGGAAACGACTTCAACGCCTACAAG-GTCTGGC 1241
consensus_7731#2      GGAGAGNTC----NATGTTNTGTACACCCAACAGNTATTGTCCNATTGCAGGCGCCCAAT 674
consensus_7731#1      CTCGCCCTG---------ACAGATCACAAAGCAACCGTGTAGTGTCGACGAC--CCGGAC 795
                         *   *             *  * *     *    *          *      *    

consensus_7731#0      CGTCGGCACTGATGCAGTTCGAGACGAGCCTGCGCGACCCGGTCTTCTACCAGCTGTACG 1301
consensus_7731#2      TGTGGANACGAATTATGTCGGGAAGCTATCAAAGGG--CTGGTC---------------- 716
consensus_7731#1      TCCCCACAGCAGCAGCAG-CAAATTCAGTGCCCAAAGTCCAACGAAGCAACAGCAGCAGC 854
                             *                              *                     

consensus_7731#0      AGCGCTTCATGGATCTGTACTACTACTTCAAGCGTTTCCTGCCAAGCTACACTTACGAGG 1361
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      AGAGATG-GCGAAAACGTACGACTATCTGTTCAAACTTTTACTGATCGGCGATTCCGGCG 913
                                                                                  

consensus_7731#0      AGCTCAACTTCAACGGTGTCGTCATCAAGGATGTCACCTTCGACAAGCTGATGACCTACT 1421
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      TCGGCAAAACCTGCATACTGGTT------------------------------------- 936
                                                                                  

consensus_7731#0      TCGACTACTTCGACTCGGATGTCTCCAACGTTCTGCCCATGCAGTCGACTGACAAGTACT 1481
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TCGACTATGCCGTGTTCGCGCGCCAGCGTCGCCTCAACCACAAGCCGTTCAGCTACACCA 1541
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TGAACGTCATGTCGGACTATACCGGCAAGGCCATCATTCGCGCGTTTGTCGGACCCAAGT 1601
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TCGATCGCTTCTTCGATCTGCAGTTCTACAAGAAGTACTTCTTCGAGATTGACCAGTATC 1661
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TGGTCGACTTCACCGCCGGCAAGAATACCTCTGTGCGTAACTCGCGCGACTTCTACTGGA 1721
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      GCGTCAAGGATCGTACCATGTACACCGACCTGTACAAGAAGATCATGCTCGGATACAACG 1781
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      GACAGGAGAAGTTCGCCCTGGACATGTCGGAGGCCCACTGTGGATTCCCGGATCGTCTGA 1841
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      TCTTGCCGAAGGGCTGGACCAGCGGTATGCCGATGCAGTTCTACTTCATCATCACGCCGT 1901
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      ACACGGCCAAGACCTACGAGCAGGGCTACCAGTACGACAAGACCTTTACTTGCGGCGTCG 1961
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      AGTCGGGAATGCGCTTCTACGACAGCCTGCCGTTCGGATATCCGTTCGATCGCGTCATCA 2021
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      ACTTCAACTACTTCTACACCAAGAACATGTACTTCAAGGATGTGTTCATCTTCCACACCG 2081
consensus_7731#2      ------------------------------------------------------------
consensus_7731#1      ------------------------------------------------------------
                                                                                  

consensus_7731#0      AAGAGATGAAAATGAACCAGAGGTACTAAAAGGTCGA 2118
consensus_7731#2      -------------------------------------
consensus_7731#1      -------------------------------------
                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)