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Anopheles gambiae
cluster # 7734 cluster # 7734       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7734#0 length = 1752 sequences # 4  
consensus_7734#1 length = 1249 sequences # 1  
consensus_7734#2 length = 671 sequences # 1  
consensus_7734#3 length = 480 sequences # 2  

consensusID : consensus_7734#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1752
fasta sequence
                              [CCGCGAAAAAAAAAACAACTATGTGTAACTGAGCAAAAACAAAAAAAGTATGAAAAGCGAAACCATTTGTGAAGTTAAGAAGAACATAAAGAATGGAAAGGCTATTGAAAGAAACACGTATCCCAACGCATATTTCCTCTTATAAAACATGATCTAGTCTGTGCAACAAATTGATACTAAAACAATGCAAAAGCAAGACATACGAATGATGGCATAGGTAGAATTCGTTAGCAATTAGTGGACGGCAAATGAGAGAACACACATAAACACAAAATCATGAAGCGAAGGAAAGGAAGTAACGATGGAACATGTATAGTGATATTAGTGTCACTTGATGACGAACGCTTCTACTGCTCAGCAATACAAATAATGCAACTGTAATGAATGGTTTGAGATAACAAACACAAAAAA-CTGTGTAAAACAATAGTCTTATGTTTTTAAATTCGACCACTGCTACCAATTCTATTCCCTATACGAGAATGCAGGAACTGCTAACGAGTAAAATCTGTAATGCTAACAAAATAACAATATGTAAACAAAACAAACATACTCACGTATACACATACAGCCACATACACGTACACACAACAGGAAGTTCTGTTGGCTTGGAAGAACTCTCGTATAGGTTTTAGTTACTTTTATAGAACAATGATTGACGGACGAATACGCAACAGCAGCATGGAAAAATATACAATCTCCATCAGCAAAGCAAAGCAAATATACATCAACACGTTAATAAAGGTTATTCGGAATAGAGAAGCCATCTTGTCTTGTAACATGGATGGCAGTGCGAGAAGCAATTGACAACCGGTGCCAGCAACAACGATACATTACAGGCATAGAAAGGAACATGCGGTAGTGAACATAATAACGCTTGTAATGTAGATGAGAACAGAAACAAAAGTAAGAAACAAACAAATATGAATGAATAATTAAAAGCAAAACTACTACTATCATACAATAACTGCAGGCAAGAGGAAAAAAGAAGGTTGGCTTTAAAGTAAAACTTTAAGCTA-AAAAAAGAACAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATCAAATGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATT-GCAACCGTCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTATATTCG-GTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAG-CAATCATGC-TACAA-AAGAAAA-AA-AGAAA-CTGCAAACAAACATA-TG-CAAAAAAACATTTGCGAAAACTGTGTCTGTGCCCGCATGTATTGCACACTNGGGGCGCCACAACACGGGCGATGCAGCCGTAAACGCGGTCACAACGCGCTAACAGCTATGCCNCTTAACCTCCACGACTGGCCCCCAAACANAACAACACCCTACACTGGCGNGAACTACACACGCACANGNCTGGCCACACACGCACGCTACACCACAAACACACCANGGGGCCAAAACCCCACCNCAACCACANCATCGGTCCCACGCAACGCACCCCCACCCACCGGGNGCACCCNNCCATTGCAACCAGGGGCCAAGGGCGACACACTTNATAACACCANGAACCACGCAACCGGGACGGGATCCCTTGGGCGANGGGTACAGCCACTTAACCGGNCTGCACAAAACCCCCCCTCGGCCACNTCGGATTGNGA]

[+] EMBL BM650021             [CCGCGAAAAAAAAAACAACTATGTGTAACTGAGCAAAAACAAAAAAAGTATGAAAAGCGAAACCATTTGTGAAGTTAAGAAGAACATAAAGAATGGAAAGGCTATTGAAAGAAACACGTATCCCAACGCATATTTCCTCTTATAAAACATGATCTAGTCTGTGCAACAAATTGATACTAAAACAATGCAAAAGCAAGACATACGAATGATGGCATAGGTAGAATTCGTTAGCAATTAGTGGACGGCAAATGAGAGAACACACATAAACACAAAATCATGAAGCGAAGGAAAGGAAGTAACGATGGAACATGTATAGTGATATTAGTGTCACTTGATGACGAACGCTTCTACTGCTCAGCAATACAAATAATGCAACTGTAATGAATGGTTTGAGATAACAAACACAAAAAA CTGTGTAAAACAATAGTCTTATGTTTTTAAATTCGACCACTGCTACCAATTCTATTCCCTATACGAGAATGCAGGAACTGCTAACGAGTAAAATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX625394             [                                                                                                                                                                                                                       AGGTAGAATTCGTTAGCAATTAGTGGACGGCAAATGAGAGAACACACATAAACACAAAATCATGAAGCGAAGGAAAGGAAGTAACGATGGAACATGTATAGTGATATTAGTGTCACTTGATGACGAACGCTTCTACTGCTCAGCAATACAAATAATGCAACTGTAATGAATGGTTTGAGATAACAAACACAAAAAAGCTGTGTAAAACAATTGTCTTATGTTTTTAAATTCGACCACTGCTACCAATTCTATTCCCTATACGAGAATGCAGGAACTGCTAACGAGTAAAATCTGTAATGCTAACAAAATAACAATATGTAAACAAAACAAACATACTCACGTATACACATACAGCCACATACACGTACACACAACAGGAAGTTCTGTTGGCTTGGAAGAACTCTCGTATAGGTTTTAGTTACTTTTATAGAACAATGATTGACGGACGAATACGCAACAGCAGCATGGAAAAATATACAATCTCCATCAGCAAAGCAAAGCAAATATACATCAACACGTTAATAAAGGTTATTCGGAATAGAGAAGCCATCTTGTCTTGTAACATGGATGGCAGTGCGAGAAGCAATTGACAACCGGTGCCAGCAACAACGATACATTACAGGCATAGAAAGGAACATGCGGTAGTGAACATAATAACGCTTGTAATGTAGATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM636935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgGAGAAGCCATCTTGTCTTGTAACATGGATGGCAGTGCGAGAAGCAATTGACAACCGGTGCCAGCAACAACGATACATTACAGGCATAGAAAGGAACATGCGGTAGTGAACATAATAACGCTTGTAATGTAGATGAGAACAGAAACAAAAGTAAGAAACAAACAAATATGAATGAATAATTAAAAGCAAAACTACTACTATCATACAATAACTGCAGGCAAGAGGAAAAAAGAAGGTTGGCTTTAAAGTAAAACTTTAAGCTA AAAAAAGAACAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATCAAATGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATT GCAACCGTCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTATATTCG GTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAG CAATCATGC TACAA AAGAAAA AA AGAAA CTGCAAACAAACATA TG CAAAAAAACATTTGCG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AL695233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cGAGTTAAAAAGAAGGTTGGCTTTAAAGTAAAACTTTAAGCTANAAAAAAGAACAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATCNAAAGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATTGGCAACCGCCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTATATTCGNGTTGGTTTTTACGGTTTTCTTTCCC TTTTGATTGTCGCGCAAGCCAATCATGCGTACAACAAGAAAACAACAGAAACCTGCAAACAAACATATTGCCAACAAAACATTTGCGAAAACTGTGTCTGTGCCCGCATGTATTGCACACTNGGGGCGCCACAACACGGGCGATGCAGCCGTAAACGCGGTCACAACGCGCTAACAGCTATGCCNCTTAACCTCCACGACTGGCCCCCAAACANAACAACACCCTACACTGGCGNGAACTACACACGCACANGNCTGGCCACACACGCACGCTACACCACAAACACACCANGGGGCCAAAACCCCACCNCAACCACANCATCGGTCCCACGCAACGCACCCCCACCCACCGGGNGCACCCNNCCATTGCAACCAGGGGCCAAGGGCGACACACTTNATAACACCANGAACCACGCAACCGGGACGGGATCCCTTGGGCGANGGGTACAGCCACTTAACCGGNCTGCACAAAACCCCCCCTCGGCCACNTCGGATTGNGA]


>consensus_7734#0 CCGCGAAAAAAAAAACAACTATGTGTAACTGAGCAAAAACAAAAAAAGTATGAAAAGCGA AACCATTTGTGAAGTTAAGAAGAACATAAAGAATGGAAAGGCTATTGAAAGAAACACGTA TCCCAACGCATATTTCCTCTTATAAAACATGATCTAGTCTGTGCAACAAATTGATACTAA AACAATGCAAAAGCAAGACATACGAATGATGGCATAGGTAGAATTCGTTAGCAATTAGTG GACGGCAAATGAGAGAACACACATAAACACAAAATCATGAAGCGAAGGAAAGGAAGTAAC GATGGAACATGTATAGTGATATTAGTGTCACTTGATGACGAACGCTTCTACTGCTCAGCA ATACAAATAATGCAACTGTAATGAATGGTTTGAGATAACAAACACAAAAAACTGTGTAAA ACAATAGTCTTATGTTTTTAAATTCGACCACTGCTACCAATTCTATTCCCTATACGAGAA TGCAGGAACTGCTAACGAGTAAAATCTGTAATGCTAACAAAATAACAATATGTAAACAAA ACAAACATACTCACGTATACACATACAGCCACATACACGTACACACAACAGGAAGTTCTG TTGGCTTGGAAGAACTCTCGTATAGGTTTTAGTTACTTTTATAGAACAATGATTGACGGA CGAATACGCAACAGCAGCATGGAAAAATATACAATCTCCATCAGCAAAGCAAAGCAAATA TACATCAACACGTTAATAAAGGTTATTCGGAATAGAGAAGCCATCTTGTCTTGTAACATG GATGGCAGTGCGAGAAGCAATTGACAACCGGTGCCAGCAACAACGATACATTACAGGCAT AGAAAGGAACATGCGGTAGTGAACATAATAACGCTTGTAATGTAGATGAGAACAGAAACA AAAGTAAGAAACAAACAAATATGAATGAATAATTAAAAGCAAAACTACTACTATCATACA ATAACTGCAGGCAAGAGGAAAAAAGAAGGTTGGCTTTAAAGTAAAACTTTAAGCTAAAAA AAGAACAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGA TAAATAATACAACAATTATTAACATTTCGGGATCAAATGAAGGAACGTTTACAGGAGTGA ACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATTGCAACCGTCGCCAGCATA ATAATAGGGCAACAATGGCCTGATATTTATATTCGGTTGTTTTTTACGGTTTTCTTTCCC TTTTTGATTGTCGCGCAAGCAATCATGCTACAAAAGAAAAAAAGAAACTGCAAACAAACA TATGCAAAAAAACATTTGCGAAAACTGTGTCTGTGCCCGCATGTATTGCACACTNGGGGC GCCACAACACGGGCGATGCAGCCGTAAACGCGGTCACAACGCGCTAACAGCTATGCCNCT TAACCTCCACGACTGGCCCCCAAACANAACAACACCCTACACTGGCGNGAACTACACACG CACANGNCTGGCCACACACGCACGCTACACCACAAACACACCANGGGGCCAAAACCCCAC CNCAACCACANCATCGGTCCCACGCAACGCACCCCCACCCACCGGGNGCACCCNNCCATT GCAACCAGGGGCCAAGGGCGACACACTTNATAACACCANGAACCACGCAACCGGGACGGG ATCCCTTGGGCGANGGGTACAGCCACTTAACCGGNCTGCACAAAACCCCCCCTCGGCCAC NTCGGATTGNGA



consensusID : consensus_7734#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1249
fasta sequence
                              [CCCGNGGTTAATGATGGCATAGTGCTACGAATCCGTTAGCATTAGTGTACTGGCAACATGAGCAGAACACCACATAAACACCACAACATCATGANGCGAAGTGAACAGTGAAGTAACTGATGTGAACATGTATAGTGATATTAGTGTCACTTGCATGACGAACTGCTTCTACTGCTCAGCAATACAAATAATGCACACCTTGTACCACTTGAACTTGGTATTTGCTGACTAACACACAACACAAACAAACTTGTGTAACACACAACTAAGTTCTTCATTGTACNCTCTANACACTCTCCGAACAAGNTTGCTTACCAAATTACTAATTCCCCTAATANCGAACGAAATTGGCAAGGNGAAACTTGGCTACACTGGANAGCTAACACTCTTGTACACTGCCTAACCAAACATTAAAACACAATNAATTGTTCCAAGACCAAAAAACACAANCAACCATTTAACTCCAACGATTAATTACAAACAANTAAACAAANGCCCAACANTNACCNACCGAGTCACCCACCACCCCAACCACCACNTGAAAATGTATACTCNGTCACATCAGAACCTCACTGACGCCACACAANAAACCNNCCTAACCCTANNATANAACGCTCTNCNACACCNCTNACACCCTAACCNACACAAACACACAAAACTAACCACTCTGACTNTAGCAAAACGAAAAANCNAANTNATCCANANCAANAACCNACAACAACACNANTAACANCACNNAACTCACATATCNCAAAAACCCTTCCCAATTACCAACCCAAAACAGCCAACANCACNNCCACCACAATATATATACCCATCTCAACCCCCCACATATNNTAAAACTTCNAAAACGACCTATAACNAACCCCATCCCCAANAACNAAACACCCACCACCCCCACANCACATNTAGNCACCATATGCTAACAANCCACAATTAACNCNTTGTTCAACAAAAATCCCNAAATNAAANNAACACTACACAAATATAAAACAAACACCNCCCNCACNCATTACCCACACAAAAAAAACAAATAAGAAAAANTAACAAAACTATTTACTAACCNTCAACANTTACAACACANAAGATANGAAANACANAATANATATAAAAATATTANAACAAACNNNAAATAACACACNCATCCGAAAAACCAAATAAATACNAATAAAAAAAACATACAANCCAACAACAACAGANCAACACAAACNAAACACACCACACCAANANAATAATCACATAAAATACC]

[+] EMBL AL696160             [CCCGNGGTTAATGATGGCATAGTGCTACGAATCCGTTAGCATTAGTGTACTGGCAACATGAGCAGAACACCACATAAACACCACAACATCATGANGCGAAGTGAACAGTGAAGTAACTGATGTGAACATGTATAGTGATATTAGTGTCACTTGCATGACGAACTGCTTCTACTGCTCAGCAATACAAATAATGCACACCTTGTACCACTTGAACTTGGTATTTGCTGACTAACACACAACACAAACAAACTTGTGTAACACACAACTAAGTTCTTCATTGTACNCTCTANACACTCTCCGAACAAGNTTGCTTACCAAATTACTAATTCCCCTAATANCGAACGAAATTGGCAAGGNGAAACTTGGCTACACTGGANAGCTAACACTCTTGTACACTGCCTAACCAAACATTAAAACACAATNAATTGTTCCAAGACCAAAAAACACAANCAACCATTTAACTCCAACGATTAATTACAAACAANTAAACAAANGCCCAACANTNACCNACCGAGTCACCCACCACCCCAACCACCACNTGAAAATGTATACTCNGTCACATCAGAACCTCACTGACGCCACACAANAAACCNNCCTAACCCTANNATANAACGCTCTNCNACACCNCTNACACCCTAACCNACACAAACACACAAAACTAACCACTCTGACTNTAGCAAAACGAAAAANCNAANTNATCCANANCAANAACCNACAACAACACNANTAACANCACNNAACTCACATATCNCAAAAACCCTTCCCAATTACCAACCCAAAACAGCCAACANCACNNCCACCACAATATATATACCCATCTCAACCCCCCACATATNNTAAAACTTCNAAAACGACCTATAACNAACCCCATCCCCAANAACNAAACACCCACCACCCCCACANCACATNTAGNCACCATATGCTAACAANCCACAATTAACNCNTTGTTCAACAAAAATCCCNAAATNAAANNAACACTACACAAATATAAAACAAACACCNCCCNCACNCATTACCCACACAAAAAAAACAAATAAGAAAAANTAACAAAACTATTTACTAACCNTCAACANTTACAACACANAAGATANGAAANACANAATANATATAAAAATATTANAACAAACNNNAAATAACACACNCATCCGAAAAACCAAATAAATACNAATAAAAAAAACATACAANCCAACAACAACAGANCAACACAAACNAAACACACCACACCAANANAATAATCACATAAAATACC]


>consensus_7734#1 CCCGNGGTTAATGATGGCATAGTGCTACGAATCCGTTAGCATTAGTGTACTGGCAACATG AGCAGAACACCACATAAACACCACAACATCATGANGCGAAGTGAACAGTGAAGTAACTGA TGTGAACATGTATAGTGATATTAGTGTCACTTGCATGACGAACTGCTTCTACTGCTCAGC AATACAAATAATGCACACCTTGTACCACTTGAACTTGGTATTTGCTGACTAACACACAAC ACAAACAAACTTGTGTAACACACAACTAAGTTCTTCATTGTACNCTCTANACACTCTCCG AACAAGNTTGCTTACCAAATTACTAATTCCCCTAATANCGAACGAAATTGGCAAGGNGAA ACTTGGCTACACTGGANAGCTAACACTCTTGTACACTGCCTAACCAAACATTAAAACACA ATNAATTGTTCCAAGACCAAAAAACACAANCAACCATTTAACTCCAACGATTAATTACAA ACAANTAAACAAANGCCCAACANTNACCNACCGAGTCACCCACCACCCCAACCACCACNT GAAAATGTATACTCNGTCACATCAGAACCTCACTGACGCCACACAANAAACCNNCCTAAC CCTANNATANAACGCTCTNCNACACCNCTNACACCCTAACCNACACAAACACACAAAACT AACCACTCTGACTNTAGCAAAACGAAAAANCNAANTNATCCANANCAANAACCNACAACA ACACNANTAACANCACNNAACTCACATATCNCAAAAACCCTTCCCAATTACCAACCCAAA ACAGCCAACANCACNNCCACCACAATATATATACCCATCTCAACCCCCCACATATNNTAA AACTTCNAAAACGACCTATAACNAACCCCATCCCCAANAACNAAACACCCACCACCCCCA CANCACATNTAGNCACCATATGCTAACAANCCACAATTAACNCNTTGTTCAACAAAAATC CCNAAATNAAANNAACACTACACAAATATAAAACAAACACCNCCCNCACNCATTACCCAC ACAAAAAAAACAAATAAGAAAAANTAACAAAACTATTTACTAACCNTCAACANTTACAAC ACANAAGATANGAAANACANAATANATATAAAAATATTANAACAAACNNNAAATAACACA CNCATCCGAAAAACCAAATAAATACNAATAAAAAAAACATACAANCCAACAACAACAGAN CAACACAAACNAAACACACCACACCAANANAATAATCACATAAAATACC



consensusID : consensus_7734#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence
                              [GATCGGCCCGAGGTTAAACATAAAGAATGGAAAGGCTATTGAAAGAACACGTATCCCAACGCATATTTCCTCTTATAAAGACATGATCTAGTCTGTGCAACAAATTGATACTAAAACAATGCAAAAGCAAGACATACGAATGCATGGCATAGCGTAGCAATTCGTCTACGCCANACCTTNGCTCGGANCGGNCAACAATGAGCAGAACACACACTACAACCACANAAACATCACTGCAAAANCGAACGCGGACAACGNGACACGGCTACAACCGCAATGCGGACAAACCCAATTAGGTTCATTAAGGTCGCAATTGAATTCTCAANGGTNNGCTTGCCACCCTCCTGGCAACTTGCAACCCGGAAACACACGGCCCCTCTTCCCTTCAACACCGCTCGGCCTGTCCCCCAAAGCTGCCCAAAAACTNCAACGCCCAAACACAACANTTGACCNAACTTCGGGNCCGCAAAACCCCTTAGGGGCAGTACAACACCTTCGCGGAAAACCACATTCAGGGAGCGCTACGANCCCAGGCAACNCGCGNCAAATTTCATAACAGCCCNCAACAACGCAACCCACAGACCCCACAACAACAACAACAAACACCCTACGGGCTTGCGCTTTCTGTGAAAACCACAACCCGCACAAACATCTACGNGGCTACTCCACCT]

[+] EMBL AL929710             [GATCGGCCCGAGGTTAAACATAAAGAATGGAAAGGCTATTGAAAGAACACGTATCCCAACGCATATTTCCTCTTATAAAGACATGATCTAGTCTGTGCAACAAATTGATACTAAAACAATGCAAAAGCAAGACATACGAATGCATGGCATAGCGTAGCAATTCGTCTACGCCANACCTTNGCTCGGANCGGNCAACAATGAGCAGAACACACACTACAACCACANAAACATCACTGCAAAANCGAACGCGGACAACGNGACACGGCTACAACCGCAATGCGGACAAACCCAATTAGGTTCATTAAGGTCGCAATTGAATTCTCAANGGTNNGCTTGCCACCCTCCTGGCAACTTGCAACCCGGAAACACACGGCCCCTCTTCCCTTCAACACCGCTCGGCCTGTCCCCCAAAGCTGCCCAAAAACTNCAACGCCCAAACACAACANTTGACCNAACTTCGGGNCCGCAAAACCCCTTAGGGGCAGTACAACACCTTCGCGGAAAACCACATTCAGGGAGCGCTACGANCCCAGGCAACNCGCGNCAAATTTCATAACAGCCCNCAACAACGCAACCCACAGACCCCACAACAACAACAACAAACACCCTACGGGCTTGCGCTTTCTGTGAAAACCACAACCCGCACAAACATCTACGNGGCTACTCCACCT]


>consensus_7734#2 GATCGGCCCGAGGTTAAACATAAAGAATGGAAAGGCTATTGAAAGAACACGTATCCCAAC GCATATTTCCTCTTATAAAGACATGATCTAGTCTGTGCAACAAATTGATACTAAAACAAT GCAAAAGCAAGACATACGAATGCATGGCATAGCGTAGCAATTCGTCTACGCCANACCTTN GCTCGGANCGGNCAACAATGAGCAGAACACACACTACAACCACANAAACATCACTGCAAA ANCGAACGCGGACAACGNGACACGGCTACAACCGCAATGCGGACAAACCCAATTAGGTTC ATTAAGGTCGCAATTGAATTCTCAANGGTNNGCTTGCCACCCTCCTGGCAACTTGCAACC CGGAAACACACGGCCCCTCTTCCCTTCAACACCGCTCGGCCTGTCCCCCAAAGCTGCCCA AAAACTNCAACGCCCAAACACAACANTTGACCNAACTTCGGGNCCGCAAAACCCCTTAGG GGCAGTACAACACCTTCGCGGAAAACCACATTCAGGGAGCGCTACGANCCCAGGCAACNC GCGNCAAATTTCATAACAGCCCNCAACAACGCAACCCACAGACCCCACAACAACAACAAC AAACACCCTACGGGCTTGCGCTTTCTGTGAAAACCACAACCCGCACAAACATCTACGNGG CTACTCCACCT



consensusID : consensus_7734#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 480
fasta sequence
                              [ATCGCCCGAGGTTNGTTGGCTTTAAAGTAAACTTTAAGCTAAAAAAAGAACAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATCAAATGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATTGCAACCGTCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTATATTCGGTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAGCAATCATGCTACAAAAGAAAAACAAGAAACTGCAAACAAACATATGCAAAAAAACATTTGCGAAAACTGTGTCTGTGCCCGTGTATTGCAATGGCGCAAACAGGCGCGCGCGTAGCGTGTTTTAGTGCGTAAGTTGCTTTAGCTCAGGATGGCCCGATTTAAAACTATTGTTGAAC]

[+] EMBL AL934659             [ATCGCCCGAGGTTNGTTGGCTTTAAAGTAAACTTTAAGCTAAAAAAAGAACAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATCAAATGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATTGCAACCGTCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTATATTCGGTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAGCAATCATGCTACAAAAGAAAAACAAGAAACTGCAAACAAACATATGCAAAAAAACATTTGCGAAAACTGTGTCTGTGCCCGTGTATTGCAATGGCGCAAACAGGCGCGCGCGTAGCGTGTTTTAGTGCGTAAGTTGCTTTAGCTCAGGATGGCCCGATTTAAAACTATTGTTGAAC]
[+] EMBL BM643138             [                                                ccgAGATAACACAACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATCAAAAGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAACACACAATGCTTAGTAAACGCAATCATTGCAACCGCCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTATATTCGGTTGGTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAGCAATCATGCTACAAAAGAAAAA AAGAAACTGCAAACAAACATATGC AAAAAACATTTGCGAAAACTGTGTCTGTGCCCGTGTATTGCAATGGCGCAAACAGGCGTGCGCGTAACGTGTTTTAGTGCGTAAGTTGCTTTAGCTCAGGATGGCCCGATTTAAAACTATTGTTGAA ]


>consensus_7734#3 ATCGCCCGAGGTTNGTTGGCTTTAAAGTAAACTTTAAGCTAAAAAAAGAACAGATAACAC AACAGACACATTCACACACATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAA TTATTAACATTTCGGGATCAAATGAAGGAACGTTTACAGGAGTGAACGTAAACGTGTAAC ACACAATGCTTAGTAAACGCAATCATTGCAACCGTCGCCAGCATAATAATAGGGCAACAA TGGCCTGATATTTATATTCGGTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCG CAAGCAATCATGCTACAAAAGAAAAACAAGAAACTGCAAACAAACATATGCAAAAAAACA TTTGCGAAAACTGTGTCTGTGCCCGTGTATTGCAATGGCGCAAACAGGCGCGCGCGTAGC GTGTTTTAGTGCGTAAGTTGCTTTAGCTCAGGATGGCCCGATTTAAAACTATTGTTGAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7734#0      CCGCGAAAAAAAAAACAACTATGTGTAACTGAGCAAAAACAAAAAAAGTATGAAAAGCGA 60
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      AACCATTTGTGAAGTTAAGAAGAACATAAAGAATGGAAAGGCTATTGAAAGAAACACGTA 120
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      TCCCAACGCATATTTCCTCTTATAAAACATGATCTAGTCTGTGCAACAAATTGATACTAA 180
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      AACAATGCAAAAGCAAGACATACGAATGATGGCATAGGTAGAATTCGTTAGCAATTAGTG 240
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------CCCGNGGTTAATGATGGCATAGTGCTACGAATCCGTTAGCA-TTAGTG 47
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      GACGGCAAATGAGAGAACA----CACATAAACAC---AAAATCATGAAGCGAAGGAAAG- 292
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      TACTGGCAACATGAGCAGAACACCACATAAACACCACAACATCATGANGCGAAGTGAACA 107
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      --GAAGTAAC-GATG-GAACATGTATAGTGATATTAGTGTCACTTG-ATGACGAAC-GCT 346
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      GTGAAGTAACTGATGTGAACATGTATAGTGATATTAGTGTCACTTGCATGACGAACTGCT 167
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      TCTACTGCTCAGCAATACAAATAATGCAA---CTGTAATGAATGGTTTGAGATAACAAAC 403
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      TCTACTGCTCAGCAATACAAATAATGCACACCTTGTACCACTTGAACTTGGTATTTGCTG 227
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      ACAAAAAACTGTGTAAAACAATAGTCTTATGTTTTTAAATTCGACCACTGCTACCAATTC 463
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ACTAACACACAACACAAACAAACTTGTGTAACACACAACTAAGTTCTTCATTGTACNCTC 287
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      TATTCCCTATACGAGAATGCAGGAACTGCTAACGAGTAAAATCTGTAATGCTAAC--AAA 521
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      TANACACTCTCCGAACAAGNTTGCTTACCAAATTACTAATTCCCCTAATANCGAACGAAA 347
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      ATAACAATATGTAA----ACAAAACAAACATACTCACGTATACACATACAGCCACATACA 577
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      TTGGCAAGGNGAAACTTGGCTACACTGGANAGCTAACACTCTTGTACACTGCCTAACCAA 407
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      CGTACACACAACAGGAAGTTCTGTTGGCTTGGAAGAACTCTCGTATAGGTTTTAGTTACT 637
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ACATTAAAACACAATNAATTGTTCCAAGACCAAAAAACACAANCA-ACCATTTAACTCCA 466
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      TTTATAGAACAATGATTGACGGACGAATACGCAACAGCAGCATG--GAAAAATATACAAT 695
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ACGATTAATTACAAACAANTAAACAAANGCCCAACANTNACCNACCGAGTCACCCACCAC 526
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      CTCCATCAGCAAAGCAAAGCAAATATACATCAACACGTTAATAAAGGTTATTCGGAATAG 755
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      CCCAACCACCACNTGAAAATGTATACTCNGTCACATCAGAACCTCACTGACGCCACACAA 586
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      AGAAGCCATCTTGTCTTGTAACATGGATGGCAGTGCGAGAAGCAATTGACAACCGGTGCC 815
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      NAAACCNNCCTAACCCT--ANNATANAACGCTCTNCNACACCNCTNACACCCTAACCNAC 644
consensus_7734#2      --------------------GATCGGCCCGAGGTTAAACATAAAGAATGGAAAGGCTATT 40
                                                                                  

consensus_7734#0      AGCAACAACGATACATTACAGGCATAGAAAGGAACATGCGGTAGTGAACATAATAACGCT 875
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ACAAACACACAAAACTAACCACTCTGACTNTAGCAAAACGAAAAANCNAANTNATCCANA 704
consensus_7734#2      GAAAGAACACGTATC---CCAACGCATATTTCCTCTTATAAAGACATGATCTAGTCTGTG 97
                                                                                  

consensus_7734#0      TGTAATGTAGATGAGAACAGAA-ACAAAAGTAAGAAACAAACAAATATGAATGAATAATT 934
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      NCAANAACCNACAACAACACNA-NTAACANCACNNAACTCACATATCNCAAAAACCCTTC 763
consensus_7734#2      CAACAAATTGATACTAAAACAATGCAAAAGCAAGACATACGAATGCATGGCATAGCGTAG 157
                                                                                  

consensus_7734#0      AAAAGCAAAACTACTACTATCATACAATAACTGCAGGCAAGAGGAAAAAAGAAGGTTGGC 994
consensus_7734#3      ----------------------------------------ATCGCCCGAGGTTNGTTGGC 20
consensus_7734#1      CCAATTACCAACCCAAAACAGCCAACANCACNNCCACCACAATATATATACCCATCTCAA 823
consensus_7734#2      CAATTCGTCTACGCCANACCTTNGCTCGGANCGGNCAACAATGAGCAGAACACACACTAC 217
                                                                                  

consensus_7734#0      TTTAAAGTAAAACTTTAAGCTAAAAAAAGAACAGATAACACAACAGACACATTCACACAC 1054
consensus_7734#3      TTTAAAGTAAA-CTTTAAGCTAAAAAAAGAACAGATAACACAACAGACACATTCACACAC 79
consensus_7734#1      CCCCCCACATATNNTAAAACTTCNAAAACGACCTATAACN----AACCCCATCCCCAANA 879
consensus_7734#2      AACCACANAAACATCACTGCAAAANCGAACGCGGACAACG----NGACACGGCTACAACC 273
                              * *        *       *   *  * ***        * *     **   

consensus_7734#0      ATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATC 1114
consensus_7734#3      ATAGAACACATAGAACGAAAAAGAGATAAATAATACAACAATTATTAACATTTCGGGATC 139
consensus_7734#1      ACNAAACACCCACCACCCCCACANCACATNTAGN-CACCATATGCTAACAANCCACAATT 938
consensus_7734#2      GCAATGCGGACA-AACCCAATTAGGTTCATTAAGGTCGCAATTG--AATTCTCAANGGTN 330
                            *    *  **              **      **  *   **          * 

consensus_7734#0      AAATGAAGGAACGTTTACAGGAGTGAACGT---AAACGTGTAACACACAATGCTTAGTAA 1171
consensus_7734#3      AAATGAAGGAACGTTTACAGGAGTGAACGT---AAACGTGTAACACACAATGCTTAGTAA 196
consensus_7734#1      AACNCNTTGTTCAACAAAAATCCCNAAATN---AAANNAACACTACACAA-ATATAAAAC 994
consensus_7734#2      NGCTTGCCACCCTCCTGGCAACTTGCAACCCGGAAACACACGGCCCCTCTTCCCTTCAAC 390
                                 *              *      ***         *        *   * 

consensus_7734#0      AC-GCAATCATTGCAACCGTCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTAT 1230
consensus_7734#3      AC-GCAATCATTGCAACCGTCGCCAGCATAATAATAGGGCAACAATGGCCTGATATTTAT 255
consensus_7734#1      AA-ACACCNCCCNCACNCATTACCCACACAAAAAA-----AACAAATAAGAAAAANTAAC 1048
consensus_7734#2      ACCGCTCGGCCTGTCCCCCAAAGCTGCCCAAAAAC-----TNCAACGCCCAAACAC-AAC 444
                      *   *            *     *  *  ** **        ***       * *   * 

consensus_7734#0      ATTCGGTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAGCAAT-CATGCT 1289
consensus_7734#3      ATTCGGTTGTTTTTTACGGTTTTCTTTCCCTTTTTGATTGTCGCGCAAGCAAT-CATGCT 314
consensus_7734#1      AAA------------ACTATTTACTAACCNTCAACANTTACAACACANAAGATANGAAAN 1096
consensus_7734#2      ANTTGA---------CCNAACTTCGGGNCCGCAAAACCCCT--TAGGGGCAGTACAACAC 493
                      *               *    * *    *                       *       

consensus_7734#0      ACAAAAGAAAAA-AAGAAACTGCAAACAAACATATGCAAAAAAACATTTGCGAAAA-CTG 1347
consensus_7734#3      ACAAAAGAAAAACAAGAAACTGCAAACAAACATATGCAAAAAAACATTTGCGAAAA-CTG 373
consensus_7734#1      ACANAATANATATAAAAATATTANAACAAACNNNAAATAACACACNCATCCGAAAAACCA 1156
consensus_7734#2      CTTCGCGGAAAACCACATTCAGGGAGCGCTACGANCCCAGGCAACNCGCGNCAAATTTCA 553
                               * *  * *       * *           *    **       ***     

consensus_7734#0      TGTCTGTGCCCGCATGTATTGCACACTNGGGGCGCCACAACACGGGCGATGCAGCCGTAA 1407
consensus_7734#3      TGTCTGTGCCCG--TGTATTGC-----AATGGCGCAAACAGGCGCGCG-------CGTAG 419
consensus_7734#1      AATAAATACNAATAAAAAAAACATA--CAANCCAACAACAACAGANCAA------CACAA 1208
consensus_7734#2      TAACAGCCCNCAACAACGCAACCCACAGACCCCACAACAACAACAACAAACACCCTACGG 613
                              *            *          *   *  *      *             

consensus_7734#0      ACGCGGTCACAACGCGCTAACAGCTATGCCNCTTAACCTCCACGACTGGCCCCCAAACAN 1467
consensus_7734#3      -CGTG-TTTTAGTGCGTAAGTTGCTTTAGCTCAGGATGGCCCGATTTAAAACTATTGTTG 477
consensus_7734#1      ACNAA-ACACACCACACCAANANAATAATCACATAAAATACC------------------ 1249
consensus_7734#2      GCTTGCGCTTTCTGTGAAAACCACA-ACCCGCACAAACATCTACGNGGCTACTCCACCT- 671
                       *                *          * *   *    *                   

consensus_7734#0      AACAACACCCTACACTGGCGNGAACTACACACGCACANGNCTGGCCACACACGCACGCTA 1527
consensus_7734#3      AAC--------------------------------------------------------- 480
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      CACCACAAACACACCANGGGGCCAAAACCCCACCNCAACCACANCATCGGTCCCACGCAA 1587
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      CGCACCCCCACCCACCGGGNGCACCCNNCCATTGCAACCAGGGGCCAAGGGCGACACACT 1647
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      TNATAACACCANGAACCACGCAACCGGGACGGGATCCCTTGGGCGANGGGTACAGCCACT 1707
consensus_7734#3      ------------------------------------------------------------
consensus_7734#1      ------------------------------------------------------------
consensus_7734#2      ------------------------------------------------------------
                                                                                  

consensus_7734#0      TAACCGGNCTGCACAAAACCCCCCCTCGGCCACNTCGGATTGNGA 1752
consensus_7734#3      ---------------------------------------------
consensus_7734#1      ---------------------------------------------
consensus_7734#2      ---------------------------------------------
                                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)