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Anopheles gambiae
cluster # 7737 cluster # 7737       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7737#0 length = 1411 sequences # 7  
consensus_7737#1 length = 181 sequences # 1  

consensusID : consensus_7737#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1411
fasta sequence
                              [CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTGACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCTTCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGCAGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACCCCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAACATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAAACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGCTATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAATGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTAAACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAACACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCCAACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAACGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGATTGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTTCCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACTATATGCTTTAAGTTTAAAACAATCTATATCT]

[+] EMBL BX622197             [CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTGACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCTTCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGCAGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACCCCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAACATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAAACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGCTATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAATGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTAAACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGNGTAGCGTTTAAGCGTTAAGTGGGG AAATTAAGCAAACAAACCCGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX610611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAACACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCCAACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAAACAACCGAAAACGAGA                                                                                                                                                                                                              ]
[+] EMBL BX610612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX610610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACCACACGACAACAGAGTACGTGTTTATTATAGTAAAATTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAACACACCTACATAAACA                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX614233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TAGTAAAAGTTGTGTTTCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGC                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX613518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCAAACAAACCCGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGTACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGAAAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCATGGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATTTTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCAAAACACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCCAACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAACGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGATTGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTTCCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACTATATGCTTTAAGTTTAAAACAATCTATATCT]
[+] EMBL BX614923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAAACATCAAGCCTAGTTCTCGATAGGGAAGAGTAGGCACTGAAAGGGTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAACGAGAGCAGAAAAACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGATTGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGGGCGAACAGCCGAACAACTATGTTCCATTTAATTTACCTGTACTTTTTTTT AATATTACAAACTGTCGTCTCCCCT                                      ]


>consensus_7737#0 CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTC TCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTG ACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCT TCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGC AGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACC CCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAAC ATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAA ACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGC TATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAA TGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTA AACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTT TCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACC CGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGT ACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGA AAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCAT GGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATT TTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAAC ACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCC AACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGA AGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAA CGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGAT TGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTT CCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACT ATATGCTTTAAGTTTAAAACAATCTATATCT



consensusID : consensus_7737#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 181
fasta sequence
                              [AGAGCGAAAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGCCATTCATGGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTATTTTCATTTTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCTC]

[+] EMBL BX615749             [AGAGCGAAAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGCCATTCATGGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTATTTTCATTTTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCTC]


>consensus_7737#1 AGAGCGAAAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGC CATTCATGGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTAT TTTCATTTTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCT C



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7737#0      CGCTATTACACTATCACTATTGAAAGCATCTATTCCAATCTTTACCTCTCTCTTTCTCTC 60
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      TCTCTCTCTCTCTCTCGCTTTATCTCTTTCTCCTCGCCACAATTTCTCTTTCATGCTCTG 120
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      ACCTGTGTGTGTGATAAATCGTTTATTATGACTCGCACACATGTACTAAATGCAATCGCT 180
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      TCGCCACATTCTTAGAGCATGGAACGATTACAGTACATTGGCTTCACGGCCAACACGGGC 240
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      AGCGGCGTTTCTCCAAGCGAGGTTTGCAATCAAGATTTTATTTACCCTTACCCACACACC 300
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      CCCCTCCCCTCCTCCTGGTTCTCTCCTCAACGTAAAACAAAACACAAAAACAAAATCAAC 360
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      ATAAAAGAGATTTCAGAAATGACGAGTTGTAATGTACCGTGGATCGCAAATGTGTATCAA 420
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      ACATCCCGCACCGATTATGAGAGTAATGACCGATACGATACTACTACTACTACACACCGC 480
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      TATATAGATAGACATAATGGGGGGCACACACACCGTGGGAACAGAAATGGCAACCGAAAA 540
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      TGCGGTGATGAGAGAGTACGAAATGGCAAACATTTAAAAAAAAAAACAAACGATCCCCTA 600
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      AACACACACACAAAACCACACGACAACAGAGTACGTGTTTATTATAGTAAAAGTTGTGTT 660
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      TCTTACGTCTTTTCTGTGTAGCGTTTAAGCGTTAAGTGGGGAAAATTAAGCAAACAAACC 720
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      CGGTATAAACGGTGTAAGATAAGTAAGATAATTTAAAACCTGTAGCTTTTCGAAAGCTGT 780
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      ACTGAACGATGGGATTGAAAGCGAAGGAATGAAAAGAGAGAGAAGAGAGAGAGAGAGCGA 840
consensus_7737#1      -----------------------------------------------------AGAGCGA 7
                                                                           *******

consensus_7737#0      AAGGAGAAAGGAGAAGAAATGGAAAAGATTGCACGATCGATGTCGTGTGTTGCCAATCAT 900
consensus_7737#1      AAGGAGAAAGGAGATGAAATGGAAAAGATTGCACGATCGATGTCGGGTGTTGCCATTCAT 67
                      ************** ****************************** ********* ****

consensus_7737#0      GGTTTCCTTTCCACTTTCTGTTTTGACTATTTTAGTGAATACGTTTTTTTTAATTTCATT 960
consensus_7737#1      GGTTTCCTTTCCACTTTCTGTTGCGACTATTTTAGTGAGTACGTTTTTGTTATTTTCATT 127
                      **********************  ************** ********* *** *******

consensus_7737#0      TTTTTCTACTTATTTCTACGATCATACAAACATATACAAGTCTGTCTCGCCCTCCGAAAC 1020
consensus_7737#1      TTTCCCTACTTATTCCTACGATCATACAGCCATATACATGTCTGTCTCGCCCTC------ 181
                      ***  ********* *************  ******** ***************      

consensus_7737#0      ACACCTACATAAACACGGTGAAAATAAAAAGAAGAAGAAAAAACACACACACACACCTCC 1080
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      AACTGTGTGTACACGCAGACAAAACATATCCCAAACATCAAGCCTAGTTCTCGATAGGGA 1140
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      AGAGTAGGCACTGAAAGGCTCTAAAAGCAGCACATACAAGAAGGAAGAACAAACCGAAAA 1200
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      CGAGAGCAGAAATACGTGTACGTGTGTGAGTATGTGTACGTGTCGGTGTGGGCGAGCGAT 1260
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      TGACTGTGGTAAAGCCCAGCGCGTATTACAACAGGGTGCGAACAGCCGAACAACTATGTT 1320
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      CCATTTAATTTACCTGTACTTTTTTTTAAATATTACAAACTGTCGTCTCCCCTTTTTACT 1380
consensus_7737#1      ------------------------------------------------------------
                                                                                  

consensus_7737#0      ATATGCTTTAAGTTTAAAACAATCTATATCT 1411
consensus_7737#1      -------------------------------
                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)