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Anopheles gambiae
cluster # 7741 cluster # 7741       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7741#0 length = 1482 sequences # 1  
consensus_7741#1 length = 1108 sequences # 4  
consensus_7741#2 length = 645 sequences # 1  
consensus_7741#3 length = 564 sequences # 1  
consensus_7741#4 length = 217 sequences # 1  

consensusID : consensus_7741#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1482
fasta sequence
                              [TAGGCAGAATCCCCCGAGTGTTTCTGCATTCTACTTCAATCGTGTCGCCTATGTGAGTCCAAGTTAATTCCAGGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAAATTANGAAACTGTGCCATGTTGTGAACATGTGNGCGCTGGACAACAAATGACCAAAAACAAAAACACGAACCGAGCAACGACCAATGTAAGTTGGGTTCACTGGCACAAACTGTGGCAAACCTGGTTGGAACTGCCAAGCAAGCAAAAACTGTGTCGTCCAAGGCCGTAACCATTACTCGGTACTGAACCCTGTGAGTTACGATNCCTGCNACACATTCCCCTGTGGGCCATCCGTTGAAAGAATTCCGTTGTTTGCCATTCTGGTTGGCCTTTGAAATTCTTCATATCGGGNCTTTCCAATTCATTGGATTCTGGACGTTTCTTTTCCGGTTCACCTNTTCCAGGGCCTTTATCACCTGGTGGTCCCCCCAAGGANGGTGGTCCGGTTATTCCTCTTACCAAAACCACTGTGGTCTGGCCGATTGTCGTTCCGCGCCTTATACCTTTGGGGTTTCCAACGGGCTCGTGGCCATTTCGAATTGGCTTTGGGGTTGGTTTTCCCTATATACCTCTGGTCGATTGATTCCCAACCTGGNTTTGNTTTGGCTCGCAAAACCACAGGTATTTTCCAACGAAGACGAAGANTACACCGCACCTTNGTGGCCTTACAANACAACATTAACGGCAATGCCTTGGGTTTAAGCCTTATTACCTTTGGTTGGACCCCTGTGGGCTTTGTTGTGGCGCCCTGGACTNCCCCGTTCCTTAACACAATTTGACTTAAATGGCCAGTGGGGCCCTTACCCGTCGGTTCGGTCNGGCCTGGTCTGGCCCTTCTGGGNNACGCCCGAATGGGCGAATTTTCCTCGGCGAAATGCTGCCCGGTTCTTCTTTCCCACTNGTGTGCCTGGTNTGTGCGCCCTCGGCTGGNGTATCCTTATTCTCTGGGGGGAGCTTATAACCTTTTGGTTTGGCCCCCGNATTTGGCACGTTACCTGGAGGAGGGTTNAACTGTGTGGGCGTCGCTTNCCATCGCGAACTTCAGACCTGGTTTATACCCCCCTTTTTTNAAACACTGGGGTTTCTTCTTAAACAAAAGACCACGTGAGTTTGGGTATGTCCCCATATGTAGGACGCCCAATCTGGACGNTGGCCGCTANGNACAACAAAAGATTACCATNGGCGCNCCCCTAAAAAAAAANGGGGGCGATTTCACCACCCCTTGGGTGTTAAAACCCCCCTNGGGTTAATGGCCACACCTNGTTTTTCCCACAAACAGACGCAAAAATGCGACANTGACGGCTGACTAGATGCTACAACAACCNACAGGGGCGGCTAATATTTCCCCCCAATAGACATGGNCCGCTTGGTCGAATCACCCCCGGGNACGTNTGTTAAAGAAAANATA]

[+] EMBL AL930348             [TAGGCAGAATCCCCCGAGTGTTTCTGCATTCTACTTCAATCGTGTCGCCTATGTGAGTCCAAGTTAATTCCAGGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAAATTANGAAACTGTGCCATGTTGTGAACATGTGNGCGCTGGACAACAAATGACCAAAAACAAAAACACGAACCGAGCAACGACCAATGTAAGTTGGGTTCACTGGCACAAACTGTGGCAAACCTGGTTGGAACTGCCAAGCAAGCAAAAACTGTGTCGTCCAAGGCCGTAACCATTACTCGGTACTGAACCCTGTGAGTTACGATNCCTGCNACACATTCCCCTGTGGGCCATCCGTTGAAAGAATTCCGTTGTTTGCCATTCTGGTTGGCCTTTGAAATTCTTCATATCGGGNCTTTCCAATTCATTGGATTCTGGACGTTTCTTTTCCGGTTCACCTNTTCCAGGGCCTTTATCACCTGGTGGTCCCCCCAAGGANGGTGGTCCGGTTATTCCTCTTACCAAAACCACTGTGGTCTGGCCGATTGTCGTTCCGCGCCTTATACCTTTGGGGTTTCCAACGGGCTCGTGGCCATTTCGAATTGGCTTTGGGGTTGGTTTTCCCTATATACCTCTGGTCGATTGATTCCCAACCTGGNTTTGNTTTGGCTCGCAAAACCACAGGTATTTTCCAACGAAGACGAAGANTACACCGCACCTTNGTGGCCTTACAANACAACATTAACGGCAATGCCTTGGGTTTAAGCCTTATTACCTTTGGTTGGACCCCTGTGGGCTTTGTTGTGGCGCCCTGGACTNCCCCGTTCCTTAACACAATTTGACTTAAATGGCCAGTGGGGCCCTTACCCGTCGGTTCGGTCNGGCCTGGTCTGGCCCTTCTGGGNNACGCCCGAATGGGCGAATTTTCCTCGGCGAAATGCTGCCCGGTTCTTCTTTCCCACTNGTGTGCCTGGTNTGTGCGCCCTCGGCTGGNGTATCCTTATTCTCTGGGGGGAGCTTATAACCTTTTGGTTTGGCCCCCGNATTTGGCACGTTACCTGGAGGAGGGTTNAACTGTGTGGGCGTCGCTTNCCATCGCGAACTTCAGACCTGGTTTATACCCCCCTTTTTTNAAACACTGGGGTTTCTTCTTAAACAAAAGACCACGTGAGTTTGGGTATGTCCCCATATGTAGGACGCCCAATCTGGACGNTGGCCGCTANGNACAACAAAAGATTACCATNGGCGCNCCCCTAAAAAAAAANGGGGGCGATTTCACCACCCCTTGGGTGTTAAAACCCCCCTNGGGTTAATGGCCACACCTNGTTTTTCCCACAAACAGACGCAAAAATGCGACANTGACGGCTGACTAGATGCTACAACAACCNACAGGGGCGGCTAATATTTCCCCCCAATAGACATGGNCCGCTTGGTCGAATCACCCCCGGGNACGTNTGTTAAAGAAAANATA]


>consensus_7741#0 TAGGCAGAATCCCCCGAGTGTTTCTGCATTCTACTTCAATCGTGTCGCCTATGTGAGTCC AAGTTAATTCCAGGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAG CGTTGTAGTATAAATTANGAAACTGTGCCATGTTGTGAACATGTGNGCGCTGGACAACAA ATGACCAAAAACAAAAACACGAACCGAGCAACGACCAATGTAAGTTGGGTTCACTGGCAC AAACTGTGGCAAACCTGGTTGGAACTGCCAAGCAAGCAAAAACTGTGTCGTCCAAGGCCG TAACCATTACTCGGTACTGAACCCTGTGAGTTACGATNCCTGCNACACATTCCCCTGTGG GCCATCCGTTGAAAGAATTCCGTTGTTTGCCATTCTGGTTGGCCTTTGAAATTCTTCATA TCGGGNCTTTCCAATTCATTGGATTCTGGACGTTTCTTTTCCGGTTCACCTNTTCCAGGG CCTTTATCACCTGGTGGTCCCCCCAAGGANGGTGGTCCGGTTATTCCTCTTACCAAAACC ACTGTGGTCTGGCCGATTGTCGTTCCGCGCCTTATACCTTTGGGGTTTCCAACGGGCTCG TGGCCATTTCGAATTGGCTTTGGGGTTGGTTTTCCCTATATACCTCTGGTCGATTGATTC CCAACCTGGNTTTGNTTTGGCTCGCAAAACCACAGGTATTTTCCAACGAAGACGAAGANT ACACCGCACCTTNGTGGCCTTACAANACAACATTAACGGCAATGCCTTGGGTTTAAGCCT TATTACCTTTGGTTGGACCCCTGTGGGCTTTGTTGTGGCGCCCTGGACTNCCCCGTTCCT TAACACAATTTGACTTAAATGGCCAGTGGGGCCCTTACCCGTCGGTTCGGTCNGGCCTGG TCTGGCCCTTCTGGGNNACGCCCGAATGGGCGAATTTTCCTCGGCGAAATGCTGCCCGGT TCTTCTTTCCCACTNGTGTGCCTGGTNTGTGCGCCCTCGGCTGGNGTATCCTTATTCTCT GGGGGGAGCTTATAACCTTTTGGTTTGGCCCCCGNATTTGGCACGTTACCTGGAGGAGGG TTNAACTGTGTGGGCGTCGCTTNCCATCGCGAACTTCAGACCTGGTTTATACCCCCCTTT TTTNAAACACTGGGGTTTCTTCTTAAACAAAAGACCACGTGAGTTTGGGTATGTCCCCAT ATGTAGGACGCCCAATCTGGACGNTGGCCGCTANGNACAACAAAAGATTACCATNGGCGC NCCCCTAAAAAAAAANGGGGGCGATTTCACCACCCCTTGGGTGTTAAAACCCCCCTNGGG TTAATGGCCACACCTNGTTTTTCCCACAAACAGACGCAAAAATGCGACANTGACGGCTGA CTAGATGCTACAACAACCNACAGGGGCGGCTAATATTTCCCCCCAATAGACATGGNCCGC TTGGTCGAATCACCCCCGGGNACGTNTGTTAAAGAAAANATA



consensusID : consensus_7741#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1108
fasta sequence
                              [CATTGCTTACGCACGAAATATACGCCTCCCGAACCGACCAACAAAAAAAAAGCGCCACAAACCAAAACAAACGAAAAACCACATCGACAGCGTATCCGCCGCGTCCGTGTCTGTGTTTATGTGAAATTCCCCCGTTTTTTTTTTACTACTATTGCTGGTGCACCCGACACGACAGATTCGCTTCCCCAGCCCAGCGCAAGCAGTGGTCACAGCAGTGCGTGCGTGCTGCGCTTCGTGCCATGTGTGTATGCCACAGCCGTCCATCGTCCATCGTTCATCCGTCCAAGACCGAGTGAAAGTGTGCACTGTTGGCGGTGCCTGGGTTGCTTCTGGAGCATTTTGGGGCACCCGTACGCGAAGCATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTAGCGCCTCAACAAGTGTCGCCTTTAGCGCAAAAAAAAACACAAACATCGCGCATTCTACTTCAATCGTGTCGCCTAGGTGAGTCAAGTAATTCCAGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATCGAGTTTTCGTACTTCAGCTACCGGCCCCAGGGGTCGTTCTTCAACACGGTCGCGATGCTCGGCTTCTGGTTCAGCGGCATCATGCTGGTGTTCTATCTGTTTCACGTGTGCGAAAAGTTTCACAAAATCCCCTGGCTAAAAATAGAGCTGTACTTCTGTGCCGGCTGGGCCGCCCTCTACATGATAGCGGCCTCGGTGGCGGCCTCGACCAGCATCGAAGCGTTTCAGGCGGCCGCGTTCTTTGGATACTGTGCCATGATCGGGTATGGGGTCGATGCGTTCCTTAAGTTTAAAAGTGTTCGGGCGGGCGAAATCGCCCAAGGCTCCCGTACCGTGCA]

[+] EMBL BX622479             [CATTGCTTACGCACGAAATATACGCCTCCCGAACCGACCAACAAAAAAAAAGCGCCACAAACCAAAACAAACGAAAAACCACATCGACAGCGTATCCGCCGCGTCCGTGTCTGTGTTTATGTGAAATTCCCCCGTTTTTTTTTTACTACTATTGCTGGTGCACCCGACACGACAGATTCGCTTCCCCAGCCCAGCGCAAGCAGTGGTCACAGCAGTGCGTGCGTGCTGCGCTTCGTGCCATGTGTGTATGCCACAGCCGTCCATCGTCCATCGTTCATCCGTCCAAGACCGAGTGAAAGTGTGCACTGTTGGCGGTGCCTGGGTTGCTTCTGGAGCATTTTGGGGCACCCGTACGCGAAGCATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTAGCGCCTCAACAAGTGTCGCCTTTAGCGCAAAAAAAAACACAAACATCGCGCATTCTACTTCAATCGTGTCGCCTAGGTGAGTCAAGTAATTCCAGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAGAACGGCAGTTGTGAAAGGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX627380             [                                                                                                                                                                                                                                                                                                                    TTGGCGGTGCCTGGGTTGCTTCTGGAGCATTTTGGGGCACCCGTACGCGAAGCATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTAGCGCCTCAACAAGTGTCGCCTTTAGCGCAAAAAAAAACACAAACATCGCGCATTCTACTTCAATCGTGTCGCCTAGGTGAGTCAAGTAATTCCAGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATCGAGTTTTCGTACTTCAGCTACCGGCCCCAGGGGTCGTTCTTCAACACGGTCGCGATGCTCGGCTTCTGGTTCAGCGGCATCATGCTGGTGTTCTATCTGTTTCACGTGTGCGAAAAGTTTCACAAAATCCCCTGGCTAAAAATAGAGCTGTACTTCTGTGCCGGCTGGGNCGCCCTCTA                                                                                                                                                               ]
[+] EMBL BX620705             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGTGAGTCAAGTAATTCCAGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATCGAGTTTTCGTACTTCAGCTACCGGCCCCAGGGGTCGTTCTTCAACACGGTCGCGATGCTCGGCTTCTGGTTCAGCGGCATCATGCTGGTGTTCTATCTGTTTCACGTGTGCGAAAAGTTTCACAAAATCCCCTGGCTAAAAATAGAGCTGTACTTCTGTGCCGGCTGGGCCGCCCTCTACATGATAGCGGCCTCGGTGGCGGCCTCGACCAGCATCGAAGCGTTTCAGGCGGCCGCGTTCTTTGGATACTGTGCCATGATCGGGTATGGGGTCGATGCGTTCCTTAAGTTTAAAAGTGTTCGGGCGGGCGAAATCGCCCAAGGCTCCCGTACCGTGCA]
[+] EMBL BX625678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATCGAGTTTTCGTACTTCAGCTACCGGCCCCAGGGGTCGTTCTTCAACACGGTCGCGATGCTCGGCTTCTGGTTCAGCGGCATCATGCTGGTGTTCTATCTGTTTCACGTGTGCGAAAAGTTTCACAAAATCCCCTGNCTAAAAATAGAGCTGTACTTCTGTGCCGGCTGGGCCGCCCTCTACATGATAGCGGCCTCNGTGGCGGCCTC                                                                                                                                    ]


>consensus_7741#1 CATTGCTTACGCACGAAATATACGCCTCCCGAACCGACCAACAAAAAAAAAGCGCCACAA ACCAAAACAAACGAAAAACCACATCGACAGCGTATCCGCCGCGTCCGTGTCTGTGTTTAT GTGAAATTCCCCCGTTTTTTTTTTACTACTATTGCTGGTGCACCCGACACGACAGATTCG CTTCCCCAGCCCAGCGCAAGCAGTGGTCACAGCAGTGCGTGCGTGCTGCGCTTCGTGCCA TGTGTGTATGCCACAGCCGTCCATCGTCCATCGTTCATCCGTCCAAGACCGAGTGAAAGT GTGCACTGTTGGCGGTGCCTGGGTTGCTTCTGGAGCATTTTGGGGCACCCGTACGCGAAG CATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTAGCGCCTCAACA AGTGTCGCCTTTAGCGCAAAAAAAAACACAAACATCGCGCATTCTACTTCAATCGTGTCG CCTAGGTGAGTCAAGTAATTCCAGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACC GTAAAGAAAGCGTTGTAGTATAATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACA AACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGC AAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCA TCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATCGAGTTTTCGT ACTTCAGCTACCGGCCCCAGGGGTCGTTCTTCAACACGGTCGCGATGCTCGGCTTCTGGT TCAGCGGCATCATGCTGGTGTTCTATCTGTTTCACGTGTGCGAAAAGTTTCACAAAATCC CCTGGCTAAAAATAGAGCTGTACTTCTGTGCCGGCTGGGCCGCCCTCTACATGATAGCGG CCTCGGTGGCGGCCTCGACCAGCATCGAAGCGTTTCAGGCGGCCGCGTTCTTTGGATACT GTGCCATGATCGGGTATGGGGTCGATGCGTTCCTTAAGTTTAAAAGTGTTCGGGCGGGCG AAATCGCCCAAGGCTCCCGTACCGTGCA



consensusID : consensus_7741#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 645
fasta sequence
                              [CCGATTTAACGCGTTCTCTCTATTATTAAATTAGGGCCACCCACGAAATCCTCCCCCCCCCCCCCCCCCTGTGTGTTGGCAATGGGGGTGGCAAGAAAACGAAACTCTGATCGGAGTGTGTGAGTGTGTGCACGCCCTTAAAGTTTTTTGAATTTAACACACCACTTGCCGTCGTCGTCATCAGCATCATCCGTTTAGCAACTGGTCGCTAAACGGTGGCAGGTGGTTTTTTTTTCGGTTGGTCTCTCCAACGCCCTCCAAGGTCGGTCCGTTTTTTGTGTGTGTGTCCCGGGAATGAATTCGAGCCGTTCCAAACGTTTTTTGCTTCCAAATTCGAAGGAGGTGGTCAAATGCGAATGAAAATAGGGTAATTCCAGAAGAGACATCAAACACCCTGGGCAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAAAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATC]

[+] EMBL BM627425             [CCGATTTAACGCGTTCTCTCTATTATTAAATTAGGGCCACCCACGAAATCCTCCCCCCCCCCCCCCCCCTGTGTGTTGGCAATGGGGGTGGCAAGAAAACGAAACTCTGATCGGAGTGTGTGAGTGTGTGCACGCCCTTAAAGTTTTTTGAATTTAACACACCACTTGCCGTCGTCGTCATCAGCATCATCCGTTTAGCAACTGGTCGCTAAACGGTGGCAGGTGGTTTTTTTTTCGGTTGGTCTCTCCAACGCCCTCCAAGGTCGGTCCGTTTTTTGTGTGTGTGTCCCGGGAATGAATTCGAGCCGTTCCAAACGTTTTTTGCTTCCAAATTCGAAGGAGGTGGTCAAATGCGAATGAAAATAGGGTAATTCCAGAAGAGACATCAAACACCCTGGGCAGCGTAGCAGACCGTAAAGAAAGCGTTGTAGTATAATTAAAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATC]


>consensus_7741#2 CCGATTTAACGCGTTCTCTCTATTATTAAATTAGGGCCACCCACGAAATCCTCCCCCCCC CCCCCCCCCTGTGTGTTGGCAATGGGGGTGGCAAGAAAACGAAACTCTGATCGGAGTGTG TGAGTGTGTGCACGCCCTTAAAGTTTTTTGAATTTAACACACCACTTGCCGTCGTCGTCA TCAGCATCATCCGTTTAGCAACTGGTCGCTAAACGGTGGCAGGTGGTTTTTTTTTCGGTT GGTCTCTCCAACGCCCTCCAAGGTCGGTCCGTTTTTTGTGTGTGTGTCCCGGGAATGAAT TCGAGCCGTTCCAAACGTTTTTTGCTTCCAAATTCGAAGGAGGTGGTCAAATGCGAATGA AAATAGGGTAATTCCAGAAGAGACATCAAACACCCTGGGCAGCGTAGCAGACCGTAAAGA AAGCGTTGTAGTATAATTAAAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAAC ACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACG GTCGTCCAGCCGTACATACGGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTG AAGATCGTGTGCATCGTGCTGAATCTCATCGGCTTCATCTGCATC



consensusID : consensus_7741#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence
                              [GCAGAATCCCCGAGGTTTGTNGTATTATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGTGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTTGTGCATCGTGCTGAATCTCATCGGTTCATCTTGCATCGAGTTTTCGTATTCAGTAACGGCCCAGGGTCGTATNCTTTCAACAAAGGGTCCCGCCGATTGCTTCCGGNACTTATCATTGGGTTTCAAGCACGAGCAATCCAATTGTTGGGTNGTTACTAATCCTTGTTTACACCAAGTTGGTTAGCGAAAAAAAGTNTTCACCCAAAAAATNCCCCCTGGGTAAAAAAATAAAGAGCTTTGTNACTCTTTCTTGGTTGTNACCNGGACTTGGTGTGCCATGAGCCCCTCCTAACATTGANATTANAGACGGGGCCTACCCAGAGTANGAGGACAGAGGCGCCTTCNGGACNCAAAGAATTCAACAA]

[+] EMBL AL695212             [GCAGAATCCCCGAGGTTTGTNGTATTATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGTGTACGACCCGGAGTACGTCCGCACCATCCCGGGCATCGTGAAGATCGTTGTGCATCGTGCTGAATCTCATCGGTTCATCTTGCATCGAGTTTTCGTATTCAGTAACGGCCCAGGGTCGTATNCTTTCAACAAAGGGTCCCGCCGATTGCTTCCGGNACTTATCATTGGGTTTCAAGCACGAGCAATCCAATTGTTGGGTNGTTACTAATCCTTGTTTACACCAAGTTGGTTAGCGAAAAAAAGTNTTCACCCAAAAAATNCCCCCTGGGTAAAAAAATAAAGAGCTTTGTNACTCTTTCTTGGTTGTNACCNGGACTTGGTGTGCCATGAGCCCCTCCTAACATTGANATTANAGACGGGGCCTACCCAGAGTANGAGGACAGAGGCGCCTTCNGGACNCAAAGAATTCAACAA]


>consensus_7741#3 GCAGAATCCCCGAGGTTTGTNGTATTATTAGAACGGCAGTTGTGAAAGGGGGGAAAAAAG CACAAACAAACACACACACACACCATGAGTGAGTTCACGCAAACGGCAACCGTGACGCAG CAGCAAACGGTCGTCCAGCCGTACATACGTGTACGACCCGGAGTACGTCCGCACCATCCC GGGCATCGTGAAGATCGTTGTGCATCGTGCTGAATCTCATCGGTTCATCTTGCATCGAGT TTTCGTATTCAGTAACGGCCCAGGGTCGTATNCTTTCAACAAAGGGTCCCGCCGATTGCT TCCGGNACTTATCATTGGGTTTCAAGCACGAGCAATCCAATTGTTGGGTNGTTACTAATC CTTGTTTACACCAAGTTGGTTAGCGAAAAAAAGTNTTCACCCAAAAAATNCCCCCTGGGT AAAAAAATAAAGAGCTTTGTNACTCTTTCTTGGTTGTNACCNGGACTTGGTGTGCCATGA GCCCCTCCTAACATTGANATTANAGACGGGGCCTACCCAGAGTANGAGGACAGAGGCGCC TTCNGGACNCAAAGAATTCAACAA



consensusID : consensus_7741#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 217
fasta sequence
                              [CCCCGAGGGTCACTGGTTGGCGGTGCTGGTTGTTCTGAGCATTTTGGGGCACCCGTACGCGAAGGCATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTTTTAGCGCCTCAACAAGTGTCGCCTTATAGGCGCAAATAAAAAACACAAACAATTCGGCGCCATTTCTACTTCAATCGTGTCGCCTAAAGTGAGTCAAGTAAAT]

[+] EMBL AL931267             [CCCCGAGGGTCACTGGTTGGCGGTGCTGGTTGTTCTGAGCATTTTGGGGCACCCGTACGCGAAGGCATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTTTTAGCGCCTCAACAAGTGTCGCCTTATAGGCGCAAATAAAAAACACAAACAATTCGGCGCCATTTCTACTTCAATCGTGTCGCCTAAAGTGAGTCAAGTAAAT]


>consensus_7741#4 CCCCGAGGGTCACTGGTTGGCGGTGCTGGTTGTTCTGAGCATTTTGGGGCACCCGTACGC GAAGGCATTCTCGATGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTTTTAGCG CCTCAACAAGTGTCGCCTTATAGGCGCAAATAAAAAACACAAACAATTCGGCGCCATTTC TACTTCAATCGTGTCGCCTAAAGTGAGTCAAGTAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      ------------------------------------------CATTGCTTACGCACGAAA 18
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      TAGGCAGAATCCCCCGAGTGTTTCTGCATTCTACTTCAATCGTGTCGCCTATGTGAGTCC 60
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      TATACGCCTCCCGAACCGACCAACAAAAAAAAAGCGCCACAAACCAAAACAAACGAAAAA 78
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      AAGTTAATTCCAGGAAGAGACAACAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAG 120
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      CCACATCGACAGCGTATCCGCCGCGTCCGTGTCTGTGTTTATGTGAAATTCCCCCGTTTT 138
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CGTTGTAGTATAAATTANGAAACTGTGCCATGTTGTGAACATGTGNGCGCTGGACAACAA 180
                                                                                  

consensus_7741#2      -----------------CCGATTTAACGCGTTCTCTC-TATTA-TTAAATTAG-GGCCAC 40
consensus_7741#3      ----------------GCAGAATCCCCGAGGTTTGTNGTATTA-TTAGAACGGCAGTTGT 43
consensus_7741#1      TTTTTTACTACTATTGCTGGTGCACCCGACACGACAGATTCGC-TTCCCCAGCCCAGCGC 197
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      ATGACCAAAAACAAAAACACGAACCGAGCAACGACCAATGTAAGTTGGGTTCACTGGCAC 240
                                                                                  

consensus_7741#2      CCACGAAATCCTCCCCCCCCCCCCCCCCCTGTGTGTTGGCAATGGGGGTGG-CA----AG 95
consensus_7741#3      GAAAGGGGGGAAAAAAGCACAAACAAACACACACACACACCATGAGTGAGTTCA----CG 99
consensus_7741#1      AAGCAGTGGTCACAGCAGTGCGTGCGTGCTGCGCTTCGTGCCATGTGTGTATGC----CA 253
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      AAACTGTGGCAAACCTGGTTGGAACTGCCAAGCAAGCAAAAACTGTGTCGTCCAAGGCCG 300
                                                                                  

consensus_7741#2      AAAACGAAACTCT-GATCGGAGTGTGTGAGTGTGTGCACG-CCCTTAAAGTTTTTTGAAT 153
consensus_7741#3      CAAACGGCAACCG-TGACGCAGCA-GCAAACGGTCGTCCA-GCCGTACA----TACGTGT 152
consensus_7741#1      CAGCCGTCCATCG-TCCATCGTTCATCCGTCCAAGACCGA-GTGAAAGTGTGCACTGTTG 311
consensus_7741#4      -----------------------------------------CCCCGAGGGTCACTGGTTG 19
consensus_7741#0      TAACCATTACTCGGTACTGAACCCTGTGAGTTACGATNCCTGCNACACATTCCCCTGTGG 360
                                                                    *         *   

consensus_7741#2      TTAACACACCACTTGCCGT--CGTCGTCATCAG-CATC-ATCCGTTTAGCAACTGGTC-- 207
consensus_7741#3      ACGACCCGGAGTACGTCCG--CACCATCCCGGG-CATC-GTGAAGATCGTTGTGCATCGT 208
consensus_7741#1      GCGGTGCCTGGGTTGCTTCTGGAGCATTTTGGGGCACCCGTACGCGAAG-CATTC-TCGA 369
consensus_7741#4      GCGGTGCT--GGTTGTTCT--GAGCATTTTGGGGCACCCGTACGCGAAGGCATTC-TCGA 74
consensus_7741#0      GCCATCCGTTGAAAGAATTC-CGTTGTTTGCCATTCTGGTTGGCCTTTGAAATTCTTCAT 419
                            *       *           *             *       *       **  

consensus_7741#2      GCTAAACGGTGGCAGGTGGTTTTTTTTTCGGTTGGTCTCTCCAACGCC-CTCCAAGGTCG 266
consensus_7741#3      GCTGAATCTCATCGGTTCATCTTGCATCGAGTTTTCGTATTCAGTAAC-GGCCCAGGGTC 267
consensus_7741#1      TGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATT---AGCGCCTCAACAAGTGTC 426
consensus_7741#4      TGGAAGTCTTGTCCGATCGTCGGCGGACGCTTCAGTATTTTTAGCGCCTCAACAAGTGTC 134
consensus_7741#0      ATCGGGNCTTTCCAATTCATTGGATTCTGGACGTTTCTTTT--CCGGTTCACCTNTTCCA 477
                                  *   *  *                 *              *       

consensus_7741#2      GTCCGTTTTTTGTGTGTGTGTCCCGGGAATGAATTCGAGCCGTTCCAAACGTTTTTTGCT 326
consensus_7741#3      GTATNCTTTCAACAAAGG-GTCCCGCCGATTGCTTCCGGNACTT------ATCATTGGGT 320
consensus_7741#1      GCCTTT--AGCGCAAA-AAAAAACACAAACAT-----CGCGCAT-----------TCTAC 467
consensus_7741#4      GCCTTATAGGCGCAAATAAAAAACACAAACAATTCGGCGCCATT-----------TCTAC 183
consensus_7741#0      GGGCCTTTATCACCTGGTGGTCCCCCCAAGGANGGTGGTCCGGTT-----ATTCCTCTTA 532
                      *                      *    *              *           *    

consensus_7741#2      TCCAAATTCGAAGGAGGTGGTCAAATGCGAATGAAAATAGGGTAATTCCAGAAGAGACAT 386
consensus_7741#3      TTCAAGCACGA-----GCAATCCAATT---------GTTGGGTNGTTACTAAT----CCT 362
consensus_7741#1      TTCAATCGTG-------TCGCCTAG-GTG------AGTCAAGTAATTCCAGAAGAGACAA 513
consensus_7741#4      TTCAATCGTG-------TCGCCTAAAGTG------AGTCAAGTAAAT------------- 217
consensus_7741#0      CCAAAACCACTGTGGTCTGGCCGATTGTCGTTCCGCGCCTTATACCTTTGGGGTTTCCAA 592
                         **                * *                  *   *             

consensus_7741#2      CAAACACCCTGGGCAGCGTAGCAGACCGTAAAGAAAGCGTTGTA---GTATAATTAAAAC 443
consensus_7741#3      TGTTTACACCAAGTTGGTTAGCG------AAAAAAAGTNTT-------CACCCAAAAAAT 409
consensus_7741#1      CAAACACCCTGGACAGCGTAGCAGACCGTAAAGAAAGCGTTGTA---GTATAATTAGAAC 570
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CGGGCTCGTGGCCATTTCGAATTGGCTTTGGGGTTGGTTTTCCCTATATACCTCTGGTCG 652
                                                                                  

consensus_7741#2      GGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACA-CACCATGA-GT 501
consensus_7741#3      NCCCCCTGGGTAAAAAAATAAAGA-GCTTTGTNACTCTTTCTTGGTTGTNACCNGGA-CT 467
consensus_7741#1      GGCAGTTGTGAAAGGGGGGAAAAAAGCACAAACAAACACACACACACA---CCATGA-GT 626
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      ATTGATTCCCAACCTGGNTTTGNTTTGGCTCGCAAAACCACAGGTATTTTCCAACGAAGA 712
                                                                                  

consensus_7741#2      GAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGG 561
consensus_7741#3      TGGTGTGC-CATGAGCCCCTCCTAACATTG----ANATTANAGACGGGGCCTACCCAGAG 522
consensus_7741#1      GAGTTCACGCAAACGGCAACCGTGACGCAGCAGCAAACGGTCGTCCAGCCGTACATACGG 686
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CGAAGANTACACCGCACCTTNGTGGCCTTACAANACAACATTAAC-GGCAATGCCTTGGG 771
                                                                                  

consensus_7741#2      TACGACCCGGAGTAC----GTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGT 617
consensus_7741#3      TANGAGGACAGAGGC----GCCTTCNGGACNCAAAGAATTCAACAA-------------- 564
consensus_7741#1      TACGACCCGGAGTAC----GTCCGCACCATCCCGGGCATCGTGAAGATCGTGTGCATCGT 742
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      TTTAAGCCTTATTACCTTTGGTTGGACCCCTGTGGGCTTTGTTGTGGCGCCCTGGACTNC 831
                                                                                  

consensus_7741#2      GCTGAATCTCATCG--GCTTCATCTGCATC------------------------------ 645
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      GCTGAATCTCATCG--GCTTCATCTGCATCGAGTTTTCGTACTTCAGCTACCGGCCCCAG 800
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CCCGTTCCTTAACACAATTTGACTTAAATGGCCAGTGGGGCCCTTACCCGTCGGTTCGGT 891
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      GGGTCGTTCTTCAACACGGTCGCGATGCTCGGCTTCTGGTTCAGCGGCATCATGCTGGTG 860
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CNGGCCTGGTCTGGCCCTTCTGGGNNACGCCCGAATGGGCGAATTTTCCTCGGCGAAATG 951
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      TTCTATCTGTTTCACGTGTGCGAAAAGTTTCACAAAATCCCCTGGCTAAAAATAGAGCTG 920
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CTGCCCGGTTCTTCTTTCCCACTNGTGTGCCTGGTNTGTGCGCCCTCGGCTGGNGTATCC 1011
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      TACTTCTGTGCCGGCTGGGCCGCCCTCTACATGATAGCGGCCTCGGTGGCGGCCTCGACC 980
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      TTATTCTCTGGGGGGAGCTTATAACCTTTTGGTTTGGCCCCCGNATTTGGCACGTTACCT 1071
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      AGCATCGAAGCGTTTCAGGCGGCCGCGTTCTTTGGATACTGTGCCATGATCGGGTATGGG 1040
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      GGAGGAGGGTTNAACTGTGTGGGCGTCGCTTNCCATCGCGAACTTCAGACCTGGTTTATA 1131
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      GTCGATGCGTTCCTTAAGTTTAAAAGTGTTCGGGCGGGCGAAATCGCCCAAGGCTCCCGT 1100
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CCCCCCTTTTTTNAAACACTGGGGTTTCTTCTTAAACAAAAGACCACGTGAGTTTGGGTA 1191
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      ACCGTGCA---------------------------------------------------- 1108
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      TGTCCCCATATGTAGGACGCCCAATCTGGACGNTGGCCGCTANGNACAACAAAAGATTAC 1251
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      ------------------------------------------------------------
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CATNGGCGCNCCCCTAAAAAAAAANGGGGGCGATTTCACCACCCCTTGGGTGTTAAAACC 1311
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      ------------------------------------------------------------
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      CCCCTNGGGTTAATGGCCACACCTNGTTTTTCCCACAAACAGACGCAAAAATGCGACANT 1371
                                                                                  

consensus_7741#2      ------------------------------------------------------------
consensus_7741#3      ------------------------------------------------------------
consensus_7741#1      ------------------------------------------------------------
consensus_7741#4      ------------------------------------------------------------
consensus_7741#0      GACGGCTGACTAGATGCTACAACAACCNACAGGGGCGGCTAATATTTCCCCCCAATAGAC 1431
                                                                                  

consensus_7741#2      ---------------------------------------------------
consensus_7741#3      ---------------------------------------------------
consensus_7741#1      ---------------------------------------------------
consensus_7741#4      ---------------------------------------------------
consensus_7741#0      ATGGNCCGCTTGGTCGAATCACCCCCGGGNACGTNTGTTAAAGAAAANATA 1482
                                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)