Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7754 cluster # 7754       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7754#0 length = 746 sequences # 2  
consensus_7754#1 length = 733 sequences # 2  
consensus_7754#2 length = 709 sequences # 2  
consensus_7754#3 length = 672 sequences # 1  
consensus_7754#4 length = 489 sequences # 1  

consensusID : consensus_7754#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 746
fasta sequence
                              [CTTTTTTTTTATTTTTTTTTTGGTTATGGTGTGATAATTCGTATTTTCTACAACTTATGTACGTTCTACGGTGAATGCGAGGGGAGGATGGATTATTTGGGCAACTCGGTACTGCGTGCTTGCTGCGAGCGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATCCCGGGGAAGCAGCCCACGCGTCCGCGG]

[+] EMBL CNS091EZ             [CTTTTTTTTTATTTTTTTTTTGGTTATGGTGTGATAATTCGTATTTTCTACAACTTATGTACGTTCTACGGTGAATGCGAGGGGAGGATGGATTATTTGGGCAACTCGGTACTGCGTGCTTGCTGCGAGCGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAAT                              ]
[-] EMBL BM603248             [                                                     CTTATGTACGTTCTACGGTGAATGCGAGGGAAGGTTGGATTATTTGGGCAACTCGGTACTGCGTGCTTGCTGCGAGCGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTAGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTGATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCGCCAACCTTTTTGTTCGCTTCGGCAGGCGATTCCTGTCCGTCGGTGGACATCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATCCCGGGGAAGCAGCCCACGCGTCCGCGG]


>consensus_7754#0 CTTTTTTTTTATTTTTTTTTTGGTTATGGTGTGATAATTCGTATTTTCTACAACTTATGT ACGTTCTACGGTGAATGCGAGGGGAGGATGGATTATTTGGGCAACTCGGTACTGCGTGCT TGCTGCGAGCGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCCAGC AGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGT AGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACG CAGTGAAACTTCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTC CCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGG GAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTT TGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCG TCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGA CTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGT GCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATCC CGGGGAAGCAGCCCACGCGTCCGCGG



consensusID : consensus_7754#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 733
fasta sequence
                              [CGTATTTTCTACAACTTATGTACGTTCTACGGTGAATGCGAGGGAAGGTTGGATTATTTAGGCAACTCGGTACTGCGTGCTTACTGCGAACGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCAAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGAAAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGATCGTTCTCGACGATGTGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGGTCGCCCAGATCGACAAGCTTGGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGAGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTGAATTGCCGGCTTTTCCCTTTGCTGAATAAATATCCCGGAAAAGCAGTGAGAAAATGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM641296             [CGTATTTTCTACAACTTATGTACGTTCTACGGTGAATGCGAGGGAAGGTTGGATTATTTAGGCAACTCGGTACTGCGTGCTTACTGCGAACGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCAAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGAAAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGATCGTTCTCGACGATGTGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGGTCGCCCAGATCGACAAGCTTGGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGAGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTGAATTGCCGGCTTTTCCCTTTGCTGAATAAATATCCCGGAAAAGCAGTGAGAAAATGCGG                        ]
[-] EMBL BM587944             [                                                                         TGCGTGCTTACTGCGAACGGGTTGCAGGGGATGAAATCAGGCCCAGCAGCTGGCAGTCCGCTTCAAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGAAAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGATCGTTCTCGACGATGTGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGGTCGCCCAGATCGACAAGCTTGGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGGTTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGAGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTGAATTGCCGGCTTTTCCCTTTGCTGAATAAATATCCCGGAAAAGCAGTGAGAAAAT CGGACGCGTGGGCGGACGCGTGGGCGG]


>consensus_7754#1 CGTATTTTCTACAACTTATGTACGTTCTACGGTGAATGCGAGGGAAGGTTGGATTATTTA GGCAACTCGGTACTGCGTGCTTACTGCGAACGGGTTGCAGGGGATGAAATCAGGCCCAGC AGCTGGCAGTCCGCTTCAAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGAA AGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTC TTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGATCGTTC TCGACGATGTGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGGTCGCCCAGATCGACA AGCTTGGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTCATTGGGCTGTTCCGGG TTGAGCGAGTCGCTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCT TCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTAC GGACCGACACGAGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGT AGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTGAATTGCCGGC TTTTCCCTTTGCTGAATAAATATCCCGGAAAAGCAGTGAGAAAATGCGGACGCGTGGGCG GACGCGTGGGCGG



consensusID : consensus_7754#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 709
fasta sequence
                              [NCGTGAATGCCGAGGAAGGTTGGATATTTGGTCAACTCGGTACTGCGTGCTTGCTGCGAGCGGGTTGCAGGGGATGAAATCAGCCCAGCAGCTGGCAGTCCGCTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTGATTGGGCTGTTCCGGGTTGAGCGAGTCACTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATCCCGGGGAAGCAGTGAGAAAATGTGAATTGTTTGATCGCAAACGCTAACCTCGGGGGATCT]

[-] EMBL AL932957             [NCGTGAATGCCGAGGAAGGTTGGATATTTGGTCAACTCGGTACTGCGTGCTTGCTGCGAGCGGGTTGCAGGGGATGAAATCAGCCCAGCAGCTGGCAGTCCGCTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGTAGCCGCACCCGGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACTTCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTCCCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTGATTGGGCTGTTCCGGGTTGAGCGAGTCACTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATCCCGGGGAAGCAGTGAGAAAATGTGAATTGTTTGATCGCAAACGCTAACCTCGGGGGATCT]
[-] EMBL BX616554             [                                                                                                                                                                                                                                                                                             TTTTCCCCGTCACAATCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACGTCTTTGGAGGTTGATTGGGCTGTTCCGGGTTGAGCGAGTCACTGTGCTTTTGGTAGGCTTTCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATC                                                            ]


>consensus_7754#2 NCGTGAATGCCGAGGAAGGTTGGATATTTGGTCAACTCGGTACTGCGTGCTTGCTGCGAG CGGGTTGCAGGGGATGAAATCAGCCCAGCAGCTGGCAGTCCGCTTCCAGCAGGGTAAGAT CCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTGACGCGTAGCCGCACCC GGGCACCTCTCACGTAATCTTCGCCATTCTTCGCGGGTCGCGTGCAGACGCAGTGAAACT TCCAGCCAAAATCGATGTACAGGTCGTTCTCGACGATATGGAATATTTTCCCCGTCACAA TCTTTCCCTCCGGATCGCCCAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAACG TCTTTGGAGGTTGATTGGGCTGTTCCGGGTTGAGCGAGTCACTGTGCTTTTGGTAGGCTT TCGCAAATCCACCAACCTTTTTGTTCGCTTCCGCAGACGATTCCTGTCCGTCGGTGGACA CCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTG CACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATT TTAATCACGTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCTAAATATCCCGGGGAAGCA GTGAGAAAATGTGAATTGTTTGATCGCAAACGCTAACCTCGGGGGATCT



consensusID : consensus_7754#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [TGCCGAGGTGAAGCTTGTATTATTTTGTCAAACTCTGTTCTGCGTNCTTTGCTGCCGAGCGGTTGCAGGGGTATGGAATCAGGCCCATCAATCTGGCAAGTCNGTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAGCGTTCGACAGTTCGAGATCTTTGACGCNTAGCCGCACCCGGGCACACTCTCACGTAATCTTCGCCATTCTTCGCAGGGTCGCAGTGCAGACGCAGTGAAACTTCCAAGCCAAAAATCGATGTACAGTCAGTTCTCGACGATATGGAATATTTTCCCACGTCAACAATCTTTCCACTCCAGGATCGCCCAAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAAACGTCTTTGGAGTTGATTGGCATGTTCACAGGTTGAGCGAGTCACTGTGCATTTTGGTAGGCATTTCGCTTCACGCAGACAGATTCCATGTCACAGTCAGGTGGACAACCACTCACTTCCAGTGCTGAACATTNACAGTACAGGACACAGACACGTGCCAGGCTGACTAAGCAGCTGCACACAGCGTCCTTTGGCGTGCTAACACGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATGCCGGCTTTTCTCTTGCTAATATCCCCGGGAACAGNCCTCGGGGC]

[-] EMBL AL931553             [TGCCGAGGTGAAGCTTGTATTATTTTGTCAAACTCTGTTCTGCGTNCTTTGCTGCCGAGCGGTTGCAGGGGTATGGAATCAGGCCCATCAATCTGGCAAGTCNGTTCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAGCGTTCGACAGTTCGAGATCTTTGACGCNTAGCCGCACCCGGGCACACTCTCACGTAATCTTCGCCATTCTTCGCAGGGTCGCAGTGCAGACGCAGTGAAACTTCCAAGCCAAAAATCGATGTACAGTCAGTTCTCGACGATATGGAATATTTTCCCACGTCAACAATCTTTCCACTCCAGGATCGCCCAAGATCGACAAGCTTTGAATTTCGCAGCAGGGAAGCAAAACGTCTTTGGAGTTGATTGGCATGTTCACAGGTTGAGCGAGTCACTGTGCATTTTGGTAGGCATTTCGCTTCACGCAGACAGATTCCATGTCACAGTCAGGTGGACAACCACTCACTTCCAGTGCTGAACATTNACAGTACAGGACACAGACACGTGCCAGGCTGACTAAGCAGCTGCACACAGCGTCCTTTGGCGTGCTAACACGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATGCCGGCTTTTCTCTTGCTAATATCCCCGGGAACAGNCCTCGGGGC]


>consensus_7754#3 TGCCGAGGTGAAGCTTGTATTATTTTGTCAAACTCTGTTCTGCGTNCTTTGCTGCCGAGC GGTTGCAGGGGTATGGAATCAGGCCCATCAATCTGGCAAGTCNGTTCCAGCAGGGTAAGA TCCTTGTTCGAACCCAAAAGCGTTCGACAGTTCGAGATCTTTGACGCNTAGCCGCACCCG GGCACACTCTCACGTAATCTTCGCCATTCTTCGCAGGGTCGCAGTGCAGACGCAGTGAAA CTTCCAAGCCAAAAATCGATGTACAGTCAGTTCTCGACGATATGGAATATTTTCCCACGT CAACAATCTTTCCACTCCAGGATCGCCCAAGATCGACAAGCTTTGAATTTCGCAGCAGGG AAGCAAAACGTCTTTGGAGTTGATTGGCATGTTCACAGGTTGAGCGAGTCACTGTGCATT TTGGTAGGCATTTCGCTTCACGCAGACAGATTCCATGTCACAGTCAGGTGGACAACCACT CACTTCCAGTGCTGAACATTNACAGTACAGGACACAGACACGTGCCAGGCTGACTAAGCA GCTGCACACAGCGTCCTTTGGCGTGCTAACACGTAGCAAAAGAGCCATACTGTGTGCGTG TGATTTTAATCACGTTTTACCGTAAATGCCGGCTTTTCTCTTGCTAATATCCCCGGGAAC AGNCCTCGGGGC



consensusID : consensus_7754#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 489
fasta sequence
                              [AGTGGGAAATTATGTCTTCCAACACACGNTCAACAAAGTCCTTTCCCACGTCCCAGGGGATCGGCCCCCCAAGGAATTCGGAACAAAGCCATGTGGGAAATGTTCCGCCAAGGCAAGGGGAAAGCAAAACGGTCTATTTGGGAAGTTTGATTTGGCCTGTTCACNGGGTTTGAGCCGAAGTCACTGTGCTTTTGGTTAGGCTTTCGCAAAATCCACCAACCTTTGTTGTTCGCTTCACGCAGACGATTCACTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGCTTTTCTCTTGCTAAATATCCCGGGAAGCAGTGAGAAAATGGTGATTGTTTGATCGCAACAGAATCCTCGGCATC]

[-] EMBL AL931757             [AGTGGGAAATTATGTCTTCCAACACACGNTCAACAAAGTCCTTTCCCACGTCCCAGGGGATCGGCCCCCCAAGGAATTCGGAACAAAGCCATGTGGGAAATGTTCCGCCAAGGCAAGGGGAAAGCAAAACGGTCTATTTGGGAAGTTTGATTTGGCCTGTTCACNGGGTTTGAGCCGAAGTCACTGTGCTTTTGGTTAGGCTTTCGCAAAATCCACCAACCTTTGTTGTTCGCTTCACGCAGACGATTCACTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGACCGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGCTTTTCTCTTGCTAAATATCCCGGGAAGCAGTGAGAAAATGGTGATTGTTTGATCGCAACAGAATCCTCGGCATC]


>consensus_7754#4 AGTGGGAAATTATGTCTTCCAACACACGNTCAACAAAGTCCTTTCCCACGTCCCAGGGGA TCGGCCCCCCAAGGAATTCGGAACAAAGCCATGTGGGAAATGTTCCGCCAAGGCAAGGGG AAAGCAAAACGGTCTATTTGGGAAGTTTGATTTGGCCTGTTCACNGGGTTTGAGCCGAAG TCACTGTGCTTTTGGTTAGGCTTTCGCAAAATCCACCAACCTTTGTTGTTCGCTTCACGC AGACGATTCACTGTCCGTCGGTGGACACCACTCCTTCCGTGCTGAACTTCACGTACGGAC CGACACGTGCCGGCTGACTAAGCGCTGCACACAGCGTCCTTTGGCGTGCTAACCGTAGCA AAAGAGCCATACTGTGTGCGTGTGATTTTAATCACGTTTTACCGTAAATTGCCGCTTTTC TCTTGCTAAATATCCCGGGAAGCAGTGAGAAAATGGTGATTGTTTGATCGCAACAGAATC CTCGGCATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7754#0      CTTTTTTTTTATTTTTTTTTTGGTTATGGTGTGATAATTCGTATTTTCTACAACTTATGT 60
consensus_7754#3      ------------------------------------------------------------
consensus_7754#1      ---------------------------------------CGTATTTTCTACAACTTATGT 21
consensus_7754#2      ------------------------------------------------------------
consensus_7754#4      ------------------------------------------------------------
                                                                                  

consensus_7754#0      ACGTTCTACGGTGAATGC-GAGGGGAGGATGG-ATTATTTGGGCAA-CTCGGTACTGCGT 117
consensus_7754#3      ---------------TGCCGAGGTGAAGCTTGTATTATTTTGTCAAACTCTGTTCTGCGT 45
consensus_7754#1      ACGTTCTACGGTGAATGC-GAGGGAAGGTTGG-ATTATTTAGGCAA-CTCGGTACTGCGT 78
consensus_7754#2      --------NCGTGAATGCCGAGG-AAGGTTGG--ATATTTGGTCAA-CTCGGTACTGCGT 48
consensus_7754#4      ------------------------------------------------------------
                                                                                  

consensus_7754#0      GCTT-GCTGCGAGCGGGTTGCAGGGG-ATGAAATCAGGCCCAGCAG-CTGGCAGTCCGCT 174
consensus_7754#3      NCTTTGCTGCCGAGCGGTTGCAGGGGTATGGAATCAGGCCCATCAATCTGGCAAGTCNGT 105
consensus_7754#1      GCTT-ACTGCGAACGGGTTGCAGGGG-ATGAAATCAGGCCCAGCAG-CTGGCAGTCCGCT 135
consensus_7754#2      GCTT-GCTGCGAGCGGGTTGCAGGGG-ATGAAATCAG-CCCAGCAG-CTGGCAGTCCGCT 104
consensus_7754#4      ------------------------------------------------------------
                                                                                  

consensus_7754#0      TCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTG 234
consensus_7754#3      TCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAA-GCGT-TCGACAGTTCGAGATCTTTG 163
consensus_7754#1      TCAAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGAAAGTTCGAGATCTTTG 195
consensus_7754#2      TCCAGCAGGGTAAGATCCTTGTTCGAACCCAAAAAGCGTGTCGACAGTTCGAGATCTTTG 164
consensus_7754#4      ------------------------------------------------------------
                                                                                  

consensus_7754#0      ACGCGTAGCCGCACCCGGGCAC-CTCTCACGTAATCTTCGCCATTCTTCGC-GGGTCGC- 291
consensus_7754#3      ACGCNTAGCCGCACCCGGGCACACTCTCACGTAATCTTCGCCATTCTTCGCAGGGTCGCA 223
consensus_7754#1      ACGCGTAGCCGCACCCGGGCAC-CTCTCACGTAATCTTCGCCATTCTTCGC-GGGTCGC- 252
consensus_7754#2      ACGCGTAGCCGCACCCGGGCAC-CTCTCACGTAATCTTCGCCATTCTTCGC-GGGTCGC- 221
consensus_7754#4      ------------------------------------------------------------
                                                                                  

consensus_7754#0      GTGCAGACGCAGTGAAACTTCCAGCC--AAAATCGATGTACAGGTCGTTCTCGACGATAT 349
consensus_7754#3      GTGCAGACGCAGTGAAACTTCCAAGCCAAAAATCGATGTACAGTCAGTTCTCGACGATAT 283
consensus_7754#1      GTGCAGACGCAGTGAAACTTCCAGCC--AAAATCGATGTACAGATCGTTCTCGACGATGT 310
consensus_7754#2      GTGCAGACGCAGTGAAACTTCCAGCC--AAAATCGATGTACAGGTCGTTCTCGACGATAT 279
consensus_7754#4      --AGTGGGAAATTATGTCTTCCAACAC-ACGNTCAACA---AAGTCCTTTCCCACGTCCC 54
                           *    * *    ******     *   ** *     *     **  * ***    

consensus_7754#0      GGAATATTTTCCC-CGTCA-CAATCTTTCC-CTCC-GGATCGCCCA-GATCGACAAGCTT 404
consensus_7754#3      GGAATATTTTCCCACGTCAACAATCTTTCCACTCCAGGATCGCCCAAGATCGACAAGCTT 343
consensus_7754#1      GGAATATTTTCCC-CGTCA-CAATCTTTCC-CTCC-GGGTCGCCCA-GATCGACAAGCTT 365
consensus_7754#2      GGAATATTTTCCC-CGTCA-CAATCTTTCC-CTCC-GGATCGCCCA-GATCGACAAGCTT 334
consensus_7754#4      AGGGGATCGGCCC-CCCAAGGAA---------TTCGGAACAAAGCCATGTGGGAAATGTT 104
                       *   **   *** *   *  **         * * *       *    * *  **  **

consensus_7754#0      TGAATTTCGCAGCAGGGAAGCAAA-CG---TCTTTGG--AGGTTCATT-GGGCTGTTC-C 456
consensus_7754#3      TGAATTTCGCAGCAGGGAAGCAAAACG---TCTTTGG--AG-TTGATT-GGCATGTTCAC 396
consensus_7754#1      GGAATTTCGCAGCAGGGAAGCAAA-CG---TCTTTGG--AGGTTCATT-GGGCTGTTC-C 417
consensus_7754#2      TGAATTTCGCAGCAGGGAAGCAAA-CG---TCTTTGG--AGGTTGATT-GGGCTGTTC-C 386
consensus_7754#4      CCGCCAAGGCAAGGGGAAAGCAAAACGGTCTATTTGGGAAGTTTGATTTGGCCTGTTCAC 164
                              ***   ** ******* **   * *****  ** ** *** **  ***** *

consensus_7754#0      GGG--TTGAGC--GAGTCGCTGTGC-TTTTGGTAGGC-TTTCGCAAA-TCCACCAACCTT 509
consensus_7754#3      AGG--TTGAGC--GAGTCACTGTGCATTTTGGTAGGCATTTCGC----TTCACGCA---- 444
consensus_7754#1      GGG--TTGAGC--GAGTCGCTGTGC-TTTTGGTAGGC-TTTCGCAAA-TCCACCAACCTT 470
consensus_7754#2      GGG--TTGAGC--GAGTCACTGTGC-TTTTGGTAGGC-TTTCGCAAA-TCCACCAACCTT 439
consensus_7754#4      NGGGTTTGAGCCGAAGTCACTGTGCTTTTGGTTAGGC-TTTCGCAAAATCCACCAACCTT 223
                       **  ******   **** ****** *** * ***** ******    * ***  *    

consensus_7754#0      T-TTGTTCGCTTC-CGCAGACGATTC-CTGTCCGTCGGTGGACACCACTCCTTCCGTGCT 566
consensus_7754#3      ----GACAGATTC-CAT-----GTCA-CAGTCAGGTGGACAACCACTCACTTCCAGTGCT 493
consensus_7754#1      T-TTGTTCGCTTC-CGCAGACGATTC-CTGTCCGTCGGTGGACACCACTCCTTCCGTGCT 527
consensus_7754#2      T-TTGTTCGCTTC-CGCAGACGATTC-CTGTCCGTCGGTGGACACCACTCCTTCCGTGCT 496
consensus_7754#4      TGTTGTTCGCTTCACGCAGACGATTCACTGTCCGTCGGTGGACACCACTCCTTCCGTGCT 283
                          *   * *** *        *   * *** *  **   **  * * * * * *****

consensus_7754#0      GAAC-TTCAC-GTACGG---ACCGACACGTGCC-GGCTGACTAAGC-GCTGCACACAGCG 619
consensus_7754#3      GAACATTNACAGTACAGGACACAGACACGTGCCAGGCTGACTAAGCAGCTGCACACAGCG 553
consensus_7754#1      GAAC-TTCAC-GTACGG---ACCGACACGAGCC-GGCTGACTAAGC-GCTGCACACAGCG 580
consensus_7754#2      GAAC-TTCAC-GTACGG---ACCGACACGTGCC-GGCTGACTAAGC-GCTGCACACAGCG 549
consensus_7754#4      GAAC-TTCAC-GTACGG---ACCGACACGTGCC-GGCTGACTAAGC-GCTGCACACAGCG 336
                      **** ** ** **** *   ** ****** *** ************ *************

consensus_7754#0      TCCTTTGGCGTGCTAAC-CGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCAC 678
consensus_7754#3      TCCTTTGGCGTGCTAACACGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCAC 613
consensus_7754#1      TCCTTTGGCGTGCTAAC-CGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCAC 639
consensus_7754#2      TCCTTTGGCGTGCTAAC-CGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCAC 608
consensus_7754#4      TCCTTTGGCGTGCTAAC-CGTAGCAAAAGAGCCATACTGTGTGCGTGTGATTTTAATCAC 395
                      ***************** ******************************************

consensus_7754#0      GTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCT----AAATATCCCGGGGAAGCAGCCC 734
consensus_7754#3      GTTTTACCGTAAAT-GCCGGCTTTTCTCTT-GCT----AA-TATCCCCGGGAA-CAGNCC 665
consensus_7754#1      GTTTTACCGTGAATTGCCGGCTTTTCCCTTTGCTGAATAAATATCCCGGAAAAGCAGTGA 699
consensus_7754#2      GTTTTACCGTAAATTGCCGGCTTTTCTCTTTGCT----AAATATCCCGGGGAAGCAGTGA 664
consensus_7754#4      GTTTTACCGTAAATTGCCG-CTTTTCTCTT-GCT----AAATATCCC-GGGAAGCAGTGA 448
                      ********** *** **** ****** *** ***    ** ****** *  ** ***   

consensus_7754#0      ACGCGTCCGCGG--------------------------------- 746
consensus_7754#3      TCGGGGC-------------------------------------- 672
consensus_7754#1      GAAAATGCGGACGCGTGGGCGGACGCGTGGGCGG----------- 733
consensus_7754#2      GAAAATGTGAATTGTTTGATCGCAAACGCTAACCTCGGGGGATCT 709
consensus_7754#4      GAAAATGGTGATTGTTTGATCGCAACAGAATCCTCGGCATC---- 489
                                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)