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Anopheles gambiae
cluster # 7764 cluster # 7764       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7764#0 length = 1008 sequences # 7  
consensus_7764#1 length = 370 sequences # 1  

consensusID : consensus_7764#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1008
fasta sequence
                              [CGCGCACATGTGGCCTTTTTTTTTTTTTTTTAAACATTAACAATTTCATATTTATTTAACATCACTACATTTAAAAGCAACTTCGCCTTACATCACACACTCACATTTTCCGCCAAGTAACTCATTCAATCGGTAGGCTCATCAGCTTTAGACTTTTGCTCTTGATTCCATCGAAGGTGTAAGTCGGGTTGACTTTTACAAATTC-ATCGTATTGCATTTCTAGATCCGTTTTAAAGCCAACCTTTGCGGCCGGTA-TTTG-TGAACCAATGGCGG-TGAAA-TTGGTGCTCGTAAGTCGCAAGCCAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCAATTCCGCGCCCACGGTAGCGACTGTTCACGC-TCAA-TCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTTCGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATT-T-TTGCATGCTTT-CCGTT-TTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGTTGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCGCTGAGCAGGTAATGCCAGAATGCGAGCATTTCT-TCATAGGACGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCT-CTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTAGCTTCAGCTCTTGCCAACGATTGACAACGAAAAATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTT]

[-] EMBL CNS09ECV             [CGCGCACATGTGGCCTTTTTTTTTTTTTTTTAAACATTAACAATTTCATATTTATTTAACATCACTACATTTAAAAGCAACTTCGCCTTACATCACACACTCACATTTTCCGCCAAGTAACTCATTCAATCGGTAGGCTCATCAGCTTTAGACTTTTGCTCTTGATTCCATCGAAGGTGTAAGTCGGGTTGACTTTTACAAATTC ATCGTATTGCATTTCTAGATCCGTTTTAAAGCCAACCTTTGCGGCCGGTA TTTG TGAACCAATGGCGG TGAAA TTGGTGCTCGTAAGTCGCAAGCCAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCAATTCCGCGCCCACGGTAGCGACTGTTCACGC TCAA TCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTTCGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATT T TTGCATGCTTT CAGTT TTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGTTGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCGCTGAGCAGGTAATGCCAGAATGCGAGCATTTCT TCATAGGACGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCT CTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGt                                                                                                                          ]
[+] EMBL CNS09HSA             [                                          ATTTCATATTTATTTAACATCACTACATTTAAAAGCAACTTCGCCTTACATCACACACTCACATTTTCCGCCAAGTAACTCATTCAATCGGTAGGCTCATCAGCTTTAGACTTTTGCTCTTGATTCCATCGAAGGTGTAAGTCGGGTTGACTTTTACAAATTC ATCGTATTGCATTTCTAGATCCGTTTTAAAGCCAACCTTTGCGGCCGGTATTTTGTTGAACCAATGGCGGTTGAAATTTGGTGCTCGTAAGTTGCAAGCCAAATGCCCGGCAAATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09ECW             [                                                       TTAACATCACTACATTTAAAAGCAACTTCGCCTTACATCACACACTCACATTTTCCGCCAAGTAACTCATTCAATCGGTAGGCTCATCAGCTTTAGACTTTTGCTCTTGATTCCATCGAAGGTGTAAGTCGGGTTGACTTTTACAAATTC ATCGTATTGCATTTCTAGATCCGTTTTAAAGCCAACCTTTGCGGCCGGTA TTTG TGAACCAATGGCGG TGAAA TTGGTGCTCGTAAGTCGCAAGCCAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCAATTCCGCGCCCACGGTAGCGACTGTTCACGC TCAA TCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTTCGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATT T TTGCATGCTTT CAGTT TTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGTTGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCGCTGAGCAGGTAATGCCAGAATGCGAGCATTTCT TCATAGGACGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCT CTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTAGCTTCAGCTCTTGCCAACGATTGACAACGAAAAATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTT]
[-] EMBL BM582796             [                                                                                                                                                                                                       AAACTCAAACTCACTGCATTTCTAGATCCGTTTTAAAGCCAACCTTTGCGGCCGGTA TTTG TGAACCAATGGCGG TGAAA TTGGTGCTCGTAAGTCGCAAGCCAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCGATTCCGCGCCCACGGTAGCGACTGTTCACGC TCAA TCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTTCGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATT T TTGCATGCTTT CCGTT TTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGTTGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCACTGAGCAGGTAATGCCAGAATGCGAGCATTTCT TCATAGGATGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCT CTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTcgg                                                                                                              ]
[-] EMBL BM637910             [                                                                                                                                                                                                                                                      GCGGCCGGTA TTTG TGAACCAATGGCGG TGAAA TTGGTGCTCGTAAGTCGCAAGCCAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCAATTCCGCGCCCACGGTAGCGACTGTTCACGC TCAA TCCGTACGCCGTAAAGTACTTATCCACACCGTACCGTTCGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATT T TTGCATGCTTT CCGTT TTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGTTGGCTCCTACCATCTCTTTGGATCCTTCCTTATAGCATACTATGGTAAACTTCTCGCTGAGCAGGTAATGCCAGAATGCGAGAATTTCT TCATAGGACGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCT CTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTTGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACcgg                                                                                                                 ]
[-] EMBL AL694976             [                                                                                                                                                                                                                                                                                                                                            CTTTCAGTATTTCGGTGGCGATTCCGCGCCCACGGTAGCGACTATTCACGCGTCAAGTCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTTCGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATTGTGTTGCATGCTTTGCCGTTGTTTATCAAATCCGTTAGGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGTTGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCACTGAACAGGTAATGCCAGAATGCGAGCATTTCTGTCATA GACGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCTGCTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCAGGAGCTTCGAACGTCCACCACACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATAATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTAGCTTCAGCTCTTttaaccctg                                                   ]
[-] EMBL CNS09HS9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCGCTGAGCAGGTAATGCCAGAATGCGAGCATTTCT TCATAGGACGCGGGAATGTGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCT CTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGt                                                                                                                          ]


>consensus_7764#0 CGCGCACATGTGGCCTTTTTTTTTTTTTTTTAAACATTAACAATTTCATATTTATTTAAC ATCACTACATTTAAAAGCAACTTCGCCTTACATCACACACTCACATTTTCCGCCAAGTAA CTCATTCAATCGGTAGGCTCATCAGCTTTAGACTTTTGCTCTTGATTCCATCGAAGGTGT AAGTCGGGTTGACTTTTACAAATTCATCGTATTGCATTTCTAGATCCGTTTTAAAGCCAA CCTTTGCGGCCGGTATTTGTGAACCAATGGCGGTGAAATTGGTGCTCGTAAGTCGCAAGC CAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCAATTCCGCGCCCAC GGTAGCGACTGTTCACGCTCAATCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTT CGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATTTTTGCATGCTTT CCGTTTTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGT TGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCGCTGA GCAGGTAATGCCAGAATGCGAGCATTTCTTCATAGGACGCGGGAATGTGTCGAACCCGGC CATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCAT CGAATCGATCTTCCGTTAAGTCCTCTACACGGTACGTCACCAGCGCACCATCCTCACGGT CCGGATCGGGAGCTTCGAACGTCCACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTT CCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTC GAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTAGCTTCAGCTCTTGCCAACGATTGA CAACGAAAAATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTT



consensusID : consensus_7764#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 370
fasta sequence
                              [GAATGCCGAGCATTTCTTCATAGGACGCGGGNATGTCGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCTNTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCTACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTGCAGCTTCAGCTCTTGCCAACGATACACTCGTGCGGATTCTTGCC]

[-] EMBL BX469771             [GAATGCCGAGCATTTCTTCATAGGACGCGGGNATGTCGTCGAACCCGGCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCTTCCGTTAAGTCCTNTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGAGCTTCGAACGTCCTACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTGCAGCTTCAGCTCTTGCCAACGATACACTCGTGCGGATTCTTGCC]


>consensus_7764#1 GAATGCCGAGCATTTCTTCATAGGACGCGGGNATGTCGTCGAACCCGGCCATACGAACAA AGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATCATCGAATCGATCT TCCGTTAAGTCCTNTACACGGTACGTCACCAGCGCACCATCCTCACGGTCCGGATCGGGA GCTTCGAACGTCCTACCAAACATTCGGAAAAGGTACGTTGGCCGGTCGTTCCCAGGGCAT GATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTCCTCGAACACTGCT GCAGCTTTGGTGGCTAGCGGTGGTTGCAGCTTCAGCTCTTGCCAACGATACACTCGTGCG GATTCTTGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7764#0      CGCGCACATGTGGCCTTTTTTTTTTTTTTTTAAACATTAACAATTTCATATTTATTTAAC 60
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      ATCACTACATTTAAAAGCAACTTCGCCTTACATCACACACTCACATTTTCCGCCAAGTAA 120
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      CTCATTCAATCGGTAGGCTCATCAGCTTTAGACTTTTGCTCTTGATTCCATCGAAGGTGT 180
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      AAGTCGGGTTGACTTTTACAAATTCATCGTATTGCATTTCTAGATCCGTTTTAAAGCCAA 240
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      CCTTTGCGGCCGGTATTTGTGAACCAATGGCGGTGAAATTGGTGCTCGTAAGTCGCAAGC 300
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      CAAATGCCCGGCAAATCGGTCGACGTGCTTTCAGTATTTCGGTGGCAATTCCGCGCCCAC 360
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      GGTAGCGACTGTTCACGCTCAATCCGTACGCCGTCAAGTACTTATCCACACCGTACCGTT 420
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      CGAATAGGTTCACCGTATCGGTCATGTACTCGTTGACGGCAACCAATTTTTGCATGCTTT 480
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      CCGTTTTTATCAAATCCGTTACGTCGTGTTTATCGCTGGCCATCTTCACCGACAGCAGGT 540
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      TGGCTCCTACCATCTCTTTGGATCCTTCCTTGTAGCATACTATGGTAAACTTCTCGCTGA 600
consensus_7764#1      ------------------------------------------------------------
                                                                                  

consensus_7764#0      GCAGGTAATGCCAGAATGC-GAGCATTTCTTCATAGGACGCGGGAATGT-GTCGAACCCG 658
consensus_7764#1      -------------GAATGCCGAGCATTTCTTCATAGGACGCGGGNATGTCGTCGAACCCG 47
                                   ****** ************************ **** **********

consensus_7764#0      GCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATC 718
consensus_7764#1      GCCATACGAACAAAGTGGCTCGTCGTCAAGGAAATGTTCGGTGTACAGTTTGATAGCATC 107
                      ************************************************************

consensus_7764#0      ATCGAATCGATCTTCCGTTAAGTCCTCTACACGGTACGTCACCAGCGCACCATCCTCACG 778
consensus_7764#1      ATCGAATCGATCTTCCGTTAAGTCCTNTACACGGTACGTCACCAGCGCACCATCCTCACG 167
                      ************************** *********************************

consensus_7764#0      GTCCGGATCGGGAGCTTCGAACGTCC-ACCAAACATTCGGAAAAGGTACGTTGGCCGGTC 837
consensus_7764#1      GTCCGGATCGGGAGCTTCGAACGTCCTACCAAACATTCGGAAAAGGTACGTTGGCCGGTC 227
                      ************************** *********************************

consensus_7764#0      GTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTC 897
consensus_7764#1      GTTCCCAGGGCATGATGCGTTTGAGAGAAGTCAGAATCACAGCTTAAGGTTACACAGTTC 287
                      ************************************************************

consensus_7764#0      CTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTT--AGCTTCAGCTCTTGCCAACG 955
consensus_7764#1      CTCGAACACTGCTGCAGCTTTGGTGGCTAGCGGTGGTTGCAGCTTCAGCTCTTGCCAACG 347
                      **************************************  ********************

consensus_7764#0      ATTGACA-ACGAAAAATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTT 1008
consensus_7764#1      ATACACTCGTGCGGATTCTTGCC------------------------------- 370
                      **  **    *   * **  *                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)