Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7778 cluster # 7778       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7778#0 length = 1036 sequences # 5  
consensus_7778#1 length = 837 sequences # 1  
consensus_7778#2 length = 680 sequences # 1  
consensus_7778#3 length = 561 sequences # 1  

consensusID : consensus_7778#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1036
fasta sequence
                              [CCGGCACGGTACAAAAACGGCGAGGGCCGCGGTCACAGTCGCGAGAAGAAAGTGCGCGTTGGTCGATATTCATCTCCCTGGAGTTGCTGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGTGAAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCT-CACGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTG-AGTGAGTGAGTGAGGGGAGAGACGGAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTGCACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGACGGATTTCAGGATAT-GGGCT-GGGGCTGTGGCTACCGTACGCTGCAATCGATCTGCTCGTGGATCATCGCCAACGGCCCACCAAAAACGGCCTCGTCCGGCGAGGTGCCGAACATTCCCACCATCCAGCAGACGCTGGTCGAGATCAAGGACAAGCCGGAACGATTTTTTGGGTCGCGCGAATGGATCGGCACGCTCGAGGCGATCTACGTCATCGACACGCTGTACGACGTGTCCTGCAAGGTGTTGCACATCGCGCGCAGCGACAGCATCGCCAAGCATGCGGACACACTGCGCGACTACTTCGAGCAGTACGGTGGGTTGATCATGATGGGGGGCGACATGGATGCGGCCTCGAAGGGTATCGCCGGCATTCACGTGAGCGTCGACCAGGACGTGTATCTGCTC]

[+] EMBL BM640177             [CCGGCACGGTACAAAAACGGCGAGGGCCGCGGTCACAGTCGCGAGAAGAAAGTGCGCGTTGGTCGATATTCATCTCCCTGGAGTTGCTGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGTAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAATGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGAGCAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCT  ACGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGA         AGTGAGTGAGGGGAGTGACGAAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTACACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGACGGATTTCAGGATATGGGGCTGGGGGCTGTGGCTAC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM646613             [     cCGGTACAAAAACGGCGAGGGCCGCGGTCACAGTCGCGAGAAGAAAGTGCGCGTTGGTCGATATTCATCTCCCTAGAGTTGCTGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGTGAAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCTACACGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTG AGTGAGTGAGTGAGGGGAGAGACGGAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTGCACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGACGGAT                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM639079             [                                                                                                                                      CCGGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGTGAAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCTACACGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTG AGTGAGTGAGTGAGGGGAGAGACGGAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTGCACAGCAATCTGGAGCCCCCGAAACCGGACGGCAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGACGGATTTCAGGATAT GGGCT GGGGCTGTGGCTACCGTACGCTGCAATCGATCTGCTCGTGGATCATCGCCAACGGCCCACCAAAAACGGCCTCGTCCGGCGAGGTGCCGAACATTCCCACCATCCAGCAGACGCTGGTCGAGATCAAGGACAA                                                                                                                                                                                                                                                             ]
[+] EMBL BM596988             [                                                                                                                                      CCGGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGTGAAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCT C CGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTGAAGTGAGTGAGTGAGGGGAGAGACGGAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTGCACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGACGGATTTCAGGATAT GGGCT GGGGCTGTGGCTACCGTACGCTGCAATCGATCTGCTCGTGGATCATCGCCAACGGCCCACCAAAGAC                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX628370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTG AGTGAGTGAGTGAGGGGAGAGACGGAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTGCACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGACGGATTTCAGGATAT GGGCT GGGGCTGTGGCTACCGTACGCTGCAATCGATCTGCTCGTGGATCATCGCCAACGGCCCACCAAAAACGGCCTCGTCCGGCGAGGTGCCGAACATTCCCACCATCCAGCAGACGCTGGTCGAGATCAAGGACAAGCCGGAACGATTTTTTGGGTCGCGCGAATGGATCGGCACGCTCGAGGCGATCTACGTCATCGACACGCTGTACGACGTGTCCTGCAAGGTGTTGCACATCGCGCGCAGCGACAGCATCGCCAAGCATGCGGACACACTGCGCGACTACTTCGAGCAGTACGGTGGGTTGATCATGATGGGGGGCGACATGGATGCGGCCTCGAAGGGTATCGCCGGCATTCACGTGAGCGTCGACCAGGACGTGTATCTGCTC]


>consensus_7778#0 CCGGCACGGTACAAAAACGGCGAGGGCCGCGGTCACAGTCGCGAGAAGAAAGTGCGCGTT GGTCGATATTCATCTCCCTGGAGTTGCTGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTC CAATTATTTCGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTC ATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGC GGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGA AGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGTGAAGGGAGCA GCAACCGATTTGCGTAAGGGAAGTGAAAGCCTCACGCTAGTGAAACAGGCATCAGGTACG CAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGT GAGTGAGTGAGTGAGGGGAGAGACGGAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACT GAACGTGCACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGG CAACTACCACTACTACCATTACGGGTGTGACGGATTTCAGGATATGGGCTGGGGCTGTGG CTACCGTACGCTGCAATCGATCTGCTCGTGGATCATCGCCAACGGCCCACCAAAAACGGC CTCGTCCGGCGAGGTGCCGAACATTCCCACCATCCAGCAGACGCTGGTCGAGATCAAGGA CAAGCCGGAACGATTTTTTGGGTCGCGCGAATGGATCGGCACGCTCGAGGCGATCTACGT CATCGACACGCTGTACGACGTGTCCTGCAAGGTGTTGCACATCGCGCGCAGCGACAGCAT CGCCAAGCATGCGGACACACTGCGCGACTACTTCGAGCAGTACGGTGGGTTGATCATGAT GGGGGGCGACATGGATGCGGCCTCGAAGGGTATCGCCGGCATTCACGTGAGCGTCGACCA GGACGTGTATCTGCTC



consensusID : consensus_7778#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 837
fasta sequence
                              [GGCAGAATCGNGCACGAGGTCGGAAGCAGCGAAATGGAGGAGACAAGTTTGCTACTGAACGTGCACAGCAATTCTGGAGCCCCCGAAAACCGGACGGGAACACGTTTTCTGATGCGCGGAACTACCACTACTACCATTACGGGTTGTGACGGATTNCAGGAATNTGGGCTTGGGGCTGTTGGCTACCGTAACGCCTGCAATTCGATCTTGTTCGGTTGGAATCATCGCCAACGGCCCACCAAAAAACGGGCCTCTCCGGCGAAGGTTGCCGAAACAATTTCCCACCAATCCAGCAAGAACGCCTGGTTCGGAAGAATCAAAGGANCAAAGCCCGGAAACCGATTTTTTTGGGGTCGCGCCGAAATGGATTCGGCANCGCCTCGAAGGGCGATTCTTACGTTCATCNGANCACCGCCTGTACCGAACCGTTGTTCCCTTGCNAAGGGTTGTTTGCACAATCCGCGCGCCGGCGGAACAGGCATCGCCCAAGCANTGCCGGGAACAACCACCTTGCGGCGACTTACTTTCCGAAGGCAAGATAACCGGTGGGGTTTGATCCATGATGGGGGGCGAACAATTGGATTTGCGGGCCTTCGAAAGGGGGTATTCCGGCCCGGGCATTTCACCGTTGAAGCGGTCNGACCAGGGACGTTGTTATCTGCTCGTGGGTCGATCCCGCACCTTTTGGTACGGGCGNCAATCAAAGGACCGAACGAGAGGAAGCTTGTACACGAAAGGAGTTACGTCCAGGTGGCAAGGAAAGGTGGAAGACTTTGTCGGACCAGTTCGTTCTACAAACCTGTGCCTGCCGATTGCTTAAGAGCCGTGAGACTGGCG]

[+] EMBL BX468664             [GGCAGAATCGNGCACGAGGTCGGAAGCAGCGAAATGGAGGAGACAAGTTTGCTACTGAACGTGCACAGCAATTCTGGAGCCCCCGAAAACCGGACGGGAACACGTTTTCTGATGCGCGGAACTACCACTACTACCATTACGGGTTGTGACGGATTNCAGGAATNTGGGCTTGGGGCTGTTGGCTACCGTAACGCCTGCAATTCGATCTTGTTCGGTTGGAATCATCGCCAACGGCCCACCAAAAAACGGGCCTCTCCGGCGAAGGTTGCCGAAACAATTTCCCACCAATCCAGCAAGAACGCCTGGTTCGGAAGAATCAAAGGANCAAAGCCCGGAAACCGATTTTTTTGGGGTCGCGCCGAAATGGATTCGGCANCGCCTCGAAGGGCGATTCTTACGTTCATCNGANCACCGCCTGTACCGAACCGTTGTTCCCTTGCNAAGGGTTGTTTGCACAATCCGCGCGCCGGCGGAACAGGCATCGCCCAAGCANTGCCGGGAACAACCACCTTGCGGCGACTTACTTTCCGAAGGCAAGATAACCGGTGGGGTTTGATCCATGATGGGGGGCGAACAATTGGATTTGCGGGCCTTCGAAAGGGGGTATTCCGGCCCGGGCATTTCACCGTTGAAGCGGTCNGACCAGGGACGTTGTTATCTGCTCGTGGGTCGATCCCGCACCTTTTGGTACGGGCGNCAATCAAAGGACCGAACGAGAGGAAGCTTGTACACGAAAGGAGTTACGTCCAGGTGGCAAGGAAAGGTGGAAGACTTTGTCGGACCAGTTCGTTCTACAAACCTGTGCCTGCCGATTGCTTAAGAGCCGTGAGACTGGCG]


>consensus_7778#1 GGCAGAATCGNGCACGAGGTCGGAAGCAGCGAAATGGAGGAGACAAGTTTGCTACTGAAC GTGCACAGCAATTCTGGAGCCCCCGAAAACCGGACGGGAACACGTTTTCTGATGCGCGGA ACTACCACTACTACCATTACGGGTTGTGACGGATTNCAGGAATNTGGGCTTGGGGCTGTT GGCTACCGTAACGCCTGCAATTCGATCTTGTTCGGTTGGAATCATCGCCAACGGCCCACC AAAAAACGGGCCTCTCCGGCGAAGGTTGCCGAAACAATTTCCCACCAATCCAGCAAGAAC GCCTGGTTCGGAAGAATCAAAGGANCAAAGCCCGGAAACCGATTTTTTTGGGGTCGCGCC GAAATGGATTCGGCANCGCCTCGAAGGGCGATTCTTACGTTCATCNGANCACCGCCTGTA CCGAACCGTTGTTCCCTTGCNAAGGGTTGTTTGCACAATCCGCGCGCCGGCGGAACAGGC ATCGCCCAAGCANTGCCGGGAACAACCACCTTGCGGCGACTTACTTTCCGAAGGCAAGAT AACCGGTGGGGTTTGATCCATGATGGGGGGCGAACAATTGGATTTGCGGGCCTTCGAAAG GGGGTATTCCGGCCCGGGCATTTCACCGTTGAAGCGGTCNGACCAGGGACGTTGTTATCT GCTCGTGGGTCGATCCCGCACCTTTTGGTACGGGCGNCAATCAAAGGACCGAACGAGAGG AAGCTTGTACACGAAAGGAGTTACGTCCAGGTGGCAAGGAAAGGTGGAAGACTTTGTCGG ACCAGTTCGTTCTACAAACCTGTGCCTGCCGATTGCTTAAGAGCCGTGAGACTGGCG



consensusID : consensus_7778#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence
                              [GGCCAGAATCGGCACGAGGTGTTAGGTCGATATTCATCTCCCTGGAGTTGCTGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGGTGATTGTGTCGTGTGACGATTGGCCCCCGCGCGGTTCCGGTGTCGAAGCCATTTTTATTAAGGTAAACAAAACGGTGGTGGTTGAGCTTGAAGGCGATCGTGAACGGGAGCAGGCAACCGATTTGCGTAAGGGGAAGTGAAAAGCCCTTTCACGCTCNGTGAAACAGGCATCAGGTACGCAAGGTGGTGTGTGTGTGTGGGCTCCCCTTTTGTGGGTTTTGTTAGTGGCAAATTTTTCACGGTGCCCTGTTGAAGTGAGTGAGTGAGTGAGGGGAGAAGGACGGAAGCAAGCGACAGATTGGAAGGAGANAAAGGTTTGCTACTTGAAGCGGTGCCACAGCNAANTCTGGAAGGCCCCCCGAAACCGGGACGGAAACACGGTTTTCTGACTGCGCGGGGAAGCGTAGCCGACGTAGCTAGCCAATTACGGGGTGTTGACGGATTGTTCAGGGATATAGG]

[+] EMBL BX468733             [GGCCAGAATCGGCACGAGGTGTTAGGTCGATATTCATCTCCCTGGAGTTGCTGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGGTGATTGTGTCGTGTGACGATTGGCCCCCGCGCGGTTCCGGTGTCGAAGCCATTTTTATTAAGGTAAACAAAACGGTGGTGGTTGAGCTTGAAGGCGATCGTGAACGGGAGCAGGCAACCGATTTGCGTAAGGGGAAGTGAAAAGCCCTTTCACGCTCNGTGAAACAGGCATCAGGTACGCAAGGTGGTGTGTGTGTGTGGGCTCCCCTTTTGTGGGTTTTGTTAGTGGCAAATTTTTCACGGTGCCCTGTTGAAGTGAGTGAGTGAGTGAGGGGAGAAGGACGGAAGCAAGCGACAGATTGGAAGGAGANAAAGGTTTGCTACTTGAAGCGGTGCCACAGCNAANTCTGGAAGGCCCCCCGAAACCGGGACGGAAACACGGTTTTCTGACTGCGCGGGGAAGCGTAGCCGACGTAGCTAGCCAATTACGGGGTGTTGACGGATTGTTCAGGGATATAGG]


>consensus_7778#2 GGCCAGAATCGGCACGAGGTGTTAGGTCGATATTCATCTCCCTGGAGTTGCTGGCAGCAG TAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGGAGGAGTTCGG TGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAAGGGTGGTTACTGCGCGGCATC AAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGGTGATTGTGTCGTGTGACGA TTGGCCCCCGCGCGGTTCCGGTGTCGAAGCCATTTTTATTAAGGTAAACAAAACGGTGGT GGTTGAGCTTGAAGGCGATCGTGAACGGGAGCAGGCAACCGATTTGCGTAAGGGGAAGTG AAAAGCCCTTTCACGCTCNGTGAAACAGGCATCAGGTACGCAAGGTGGTGTGTGTGTGTG GGCTCCCCTTTTGTGGGTTTTGTTAGTGGCAAATTTTTCACGGTGCCCTGTTGAAGTGAG TGAGTGAGTGAGGGGAGAAGGACGGAAGCAAGCGACAGATTGGAAGGAGANAAAGGTTTG CTACTTGAAGCGGTGCCACAGCNAANTCTGGAAGGCCCCCCGAAACCGGGACGGAAACAC GGTTTTCTGACTGCGCGGGGAAGCGTAGCCGACGTAGCTAGCCAATTACGGGGTGTTGAC GGATTGTTCAGGGATATAGG



consensusID : consensus_7778#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 561
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGTAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAATGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGAGCAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCTACGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTGAGTGAGGGGAGTGACGAAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTACACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGAC]

[+] EMBL BM630151             [CCGCCCACGCGTCCGCCCACGCGTCCGGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCCAATTATTTCGTTGCCCGTCAGCTGTAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTGCCGTAATGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCGGAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAAGCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGAGCAGGGAGCAGCAACCGATTTGCGTAAGGGAAGTGAAAGCCTACGCTAGTGAAACAGGCATCAGGTACGCAGTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTGAGTGAGGGGAGTGACGAAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTACACAGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCACTACTACCATTACGGGTGTGAC]


>consensus_7778#3 CCGCCCACGCGTCCGCCCACGCGTCCGGGCAGCAGTAGTCGTCGTCGGAAAGGCGCGTCC AATTATTTCGTTGCCCGTCAGCTGTAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCA TCGCTGTGCCGTAATGGTGGTTACTGCGCGGCATCAAAAGCCCTTTTATTCGGTCGGGCG GAAGATTTGATTGCGTGATTGTGTCGTGTGACGATTGGCTCCGCGCGGTTCAGTGTCGAA GCCATTTATTAGTAAACAAAACGGTGGTGGTGAGCGTGAAGGCGATCGAGCAGGGAGCAG CAACCGATTTGCGTAAGGGAAGTGAAAGCCTACGCTAGTGAAACAGGCATCAGGTACGCA GTGTGTGTGTGTGGCTCCCTTTTGGTTTGTTAGTGCAATTTTCACGTGCCTGTGAAGTGA GTGAGGGGAGTGACGAAAGCAAGCGAAATGGAGGAGAAAAGTTTGCTACTGAACGTACAC AGCAATCTGGAGCCCCCGAAACCGGACGGGAACACGTTTCTGATGCGCGGCAACTACCAC TACTACCATTACGGGTGTGAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7778#2      ------------------------------------------------------------
consensus_7778#3      ------------------------------------------------------------
consensus_7778#0      --------------------------------------------CCGGCACGGTACAAAA 16
consensus_7778#1      GGCAGAATCGNGCACGAGGTCGGAAGCAGCGAAATGGAGGAGACAAGTTTGCTACTGAAC 60
                                                                                  

consensus_7778#2      --------------------GGCCAGAATCGGCACGAGGTGTTAGGTCGAT-ATTCATCT 39
consensus_7778#3      ----------------------------------------------CCGCCCACGCGTCC 14
consensus_7778#0      ACGGCGAGGGCCGCGGTCACAGTCGCGAGAAGAAAGTGCGCGTTGGTCGAT-ATTCATCT 75
consensus_7778#1      GTGCACAGCAATTCTGGAGCCCCCGAAAACCGGACG-GGAACACGTTTTCTGATGCGCGG 119
                                                                          *  *    

consensus_7778#2      CCCTGGAGTTGCTGGCAGCAGTAGTCGTCG------TCGGAAAGGCGCGTCCAATTATTT 93
consensus_7778#3      GCCCACGCGTCCGGGCAGCAGTAGTCGTCG------TCGGAAAGGCGCGTCCAATTATTT 68
consensus_7778#0      CCCTGGAGTTGCTGGCAGCAGTAGTCGTCG------TCGGAAAGGCGCGTCCAATTATTT 129
consensus_7778#1      AACTACCACTACTACCATTACGGGTTGTGACGGATTNCAGGAATNTGGGCTTGGGGCTGT 179
                        *      * *   **  *   ** **         * * **   * *        * *

consensus_7778#2      CGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTG 153
consensus_7778#3      CGTTGCCCGTCAGCTGTAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTG 128
consensus_7778#0      CGTTGCCCGTCAGCTGGAGGAGTTCGGTGCTGTGTGGTCGTCGTCGTCGTCATCGCTGTG 189
consensus_7778#1      TGGCTACCGT-AACGCCTGCAATTCGATCTTGTTCGGTTGGAATCATCGCCAACGGCCCA 238
                       *    **** * *    * * **** *  ***  *** *   ** *** ** **     

consensus_7778#2      CCGTAAGGGTGGTTACTGCGCGGCA-----TCAAAAGCCCTTTTATTCGGTCGGGCG-GA 207
consensus_7778#3      CCGTAATGGTGGTTACTGCGCGGCA-----TCAAAAGCCCTTTTATTCGGTCGGGCG-GA 182
consensus_7778#0      CCGTAAGGGTGGTTACTGCGCGGCA-----TCAAAAGCCCTTTTATTCGGTCGGGCG-GA 243
consensus_7778#1      CCAAAAAACGGGCCTCTCCGGCGAAGGTTGCCGAAACAATTTCCCACCAATCCAGCAAGA 298
                      **  **    **   ** **  * *      * ***    **     *  **  **  **

consensus_7778#2      AGATTTGATTGCGGTGATTGTGTCGTGTGACGATTGGCCCCCGCGCGGTTCCGGTGTCGA 267
consensus_7778#3      AGATTTGATTGCG-TGATTGTGTCGTGTGACGATTGGCTCC-GCGCGGTTC-AGTGTCGA 239
consensus_7778#0      AGATTTGATTGCG-TGATTGTGTCGTGTGACGATTGGCTCC-GCGCGGTTC-AGTGTCGA 300
consensus_7778#1      ACGCCTGGTTCGGAAGAATCAAAGGANCAAAGCCCGGAAACCGATTTTTTT-GGGGTCGC 357
                      *    ** **  *  ** *     *    * *   **   * *     **   * **** 

consensus_7778#2      AGCCATTTTTATTAAG--GTAAACAAAACGGTGGTGGTTGAGCTTGAAGGCGATCGTGAA 325
consensus_7778#3      AGCCATTT--ATTA----GTAAACAAAACGGTGGTGGT-GAGCGTGAAGGCGATCGAGCA 292
consensus_7778#0      AGCCATTT--ATTA----GTAAACAAAACGGTGGTGGT-GAGCGTGAAGGCGATCGTGAA 353
consensus_7778#1      GCCGAAATGGATTCGGCANCGCCTCGAAGGGCGATTCT--TACGTTCATCNGANCACCGC 415
                        * *  *  ***             ** ** * *  *    * *  *   ** *     

consensus_7778#2      CGGGAGCAGGCAACCGAT---TTGCGTAAGGGGAAGTGAAAAGCCCTTTCACGCTCNGTG 382
consensus_7778#3      -GGGAGCAG-CAACCGAT---TTGCGTAAGGG-AAGTGAAAGCCT-----ACGCT-AGTG 340
consensus_7778#0      -GGGAGCAG-CAACCGAT---TTGCGTAAGGG-AAGTGAAAGCCTC----ACGCT-AGTG 402
consensus_7778#1      CTGTACCGAACCGTTGTTCCCTTGCNAAGGGTTGTTTGCACAATCC--GCGCGCC-GGCG 472
                        * * *   *    * *   ****  * **     ** *           ***   * *

consensus_7778#2      AAACAGGCATCAGGTACGCAAGGTGGTGTGTG-------TGTGTGGGCTCCCCTTTTGTG 435
consensus_7778#3      AAACAGGCATCAGGTACGCA-----GTGTGTG-------TGTGTGG-CTCCCTTTTGGT- 386
consensus_7778#0      AAACAGGCATCAGGTACGCA-----GTGTGTG-------TGTGTGG-CTCCCTTTTGGT- 448
consensus_7778#1      GAACAGGCATCGCCCAAGCANTGCCGGGAACAACCACCTTGCGGCGACTTACTTTCCGAA 532
                       **********    * ***     * *           ** *  * **  * **  *  

consensus_7778#2      GGTTTTGTTAGTGGCAAATTTT---TCACGGTGCC----------CTGTTGAAGTGAGTG 482
consensus_7778#3      ----TTGTTAGTG-CAA--TTT---TCACG-TGCC----------T-------GTGA--- 415
consensus_7778#0      ----TTGTTAGTG-CAA--TTT---TCACG-TGCC----------TG--TGAAGTGAGTG 485
consensus_7778#1      GGCAAGATAACCGGTGGGGTTTGATCCATGATGGGGGGCGAACAATTGGATTTGCGGGCC 592
                             * *  *      ***    ** * **                    * *    

consensus_7778#2      AGTGAGTGAGGGGAGAAGGACGGAAGCA----AGCGACAGATTGGAAGGAGANAAAGGTT 538
consensus_7778#3      AGTGAGTGAGGGGAGT--GACGAAAGCA----AGCGAAA---TGGAGG---AGAAAAGTT 463
consensus_7778#0      AGTGAGTGAGGGGAGA--GACGGAAGCA----AGCGAAA---TGGAGG---AGAAAAGTT 533
consensus_7778#1      TTCGAAAGGGGGTATTCCGGCCCGGGCATTTCACCGTTGAAGCGGTCNGACCAGGGACGT 652
                         **  * *** *    * *    ***    * **       **              *

consensus_7778#2      TGCTACTTG---AAGCGGTGCCACAGCNAANTCTGGAAGGCCCCCCGAAACCGGGACGGA 595
consensus_7778#3      TGCTACTGA---ACGTA----CACAGCAA--TCTGGAG---CCCCCGAAACCGG-ACGGG 510
consensus_7778#0      TGCTACTGA---ACGTG----CACAGCAA--TCTGGAG---CCCCCGAAACCGG-ACGGG 580
consensus_7778#1      TGTTATCTGCTCGTGGGTCGATCCCGCACCTTTTGGTACGGGCGNCAATCAAAGGACCGA 712
                      ** **         *        * **    * ***      *  * *     * ** * 

consensus_7778#2      AACACGGTTTTCTGACTGCGCGGGGAAGCGTA-GCCGACGTAGCTAGCCA-ATTACGGGG 653
consensus_7778#3      AACACG--TTTCTGA-TGCGCGG-------CA-ACTACCACTACTACC---ATTACGGG- 555
consensus_7778#0      AACACG--TTTCTGA-TGCGCGG-------CA-ACTACCACTACTACC---ATTACGGG- 625
consensus_7778#1      ACGAGAGGAAGCTTG-TACACGAAAGGAGTTACGTCCAGGTGGCAAGGAAAGGTGGAAGA 771
                      *  *       **   * * **         *           * *       *    * 

consensus_7778#2      TGTTGACGGATTGTTCAGGGATATAGG--------------------------------- 680
consensus_7778#3      TGT-GAC----------------------------------------------------- 561
consensus_7778#0      TGT-GACGGA---TTTCAGGATATGGGCTGGGGCTGTGGCTACCGTACGCTGCAATCGAT 681
consensus_7778#1      CTTTGTCGGACCAGTTCGTTCTACAAACCTGTGCCTGCCGATTGCTTAAGAGCCGTGAGA 831
                        * * *                                                     

consensus_7778#2      ------------------------------------------------------------
consensus_7778#3      ------------------------------------------------------------
consensus_7778#0      CTGCTCGTGGATCATCGCCAACGGCCCACCAAAAACGGCCTCGTCCGGCGAGGTGCCGAA 741
consensus_7778#1      CTGGCG------------------------------------------------------ 837
                                                                                  

consensus_7778#2      ------------------------------------------------------------
consensus_7778#3      ------------------------------------------------------------
consensus_7778#0      CATTCCCACCATCCAGCAGACGCTGGTCGAGATCAAGGACAAGCCGGAACGATTTTTTGG 801
consensus_7778#1      ------------------------------------------------------------
                                                                                  

consensus_7778#2      ------------------------------------------------------------
consensus_7778#3      ------------------------------------------------------------
consensus_7778#0      GTCGCGCGAATGGATCGGCACGCTCGAGGCGATCTACGTCATCGACACGCTGTACGACGT 861
consensus_7778#1      ------------------------------------------------------------
                                                                                  

consensus_7778#2      ------------------------------------------------------------
consensus_7778#3      ------------------------------------------------------------
consensus_7778#0      GTCCTGCAAGGTGTTGCACATCGCGCGCAGCGACAGCATCGCCAAGCATGCGGACACACT 921
consensus_7778#1      ------------------------------------------------------------
                                                                                  

consensus_7778#2      ------------------------------------------------------------
consensus_7778#3      ------------------------------------------------------------
consensus_7778#0      GCGCGACTACTTCGAGCAGTACGGTGGGTTGATCATGATGGGGGGCGACATGGATGCGGC 981
consensus_7778#1      ------------------------------------------------------------
                                                                                  

consensus_7778#2      -------------------------------------------------------
consensus_7778#3      -------------------------------------------------------
consensus_7778#0      CTCGAAGGGTATCGCCGGCATTCACGTGAGCGTCGACCAGGACGTGTATCTGCTC 1036
consensus_7778#1      -------------------------------------------------------
                                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)