cluster # 778

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Anopheles gambiae
cluster # 778 cluster # 778 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_778#0 length = 902 sequences # 1

consensus_778#1 length = 91 sequences # 1

consensusID : consensus_778#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 902
fasta sequence

                              [CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAGAAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGCCCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAAAACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACACCAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGCCAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACACCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGAGAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGACACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACACGAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACGACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGACGAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAACAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAAAAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAAAAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAGAA]

[+] EMBL CNS08F1J             [CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAGAAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGCCCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAAAACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACACCAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGCCAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACACCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGAGAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGACACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACACGAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACGACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGACGAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAACAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAAAAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAAAAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAGAA]




>consensus_778#0
CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAG
AAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGC
CCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAA
AACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACAC
CAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGC
CAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACA
CCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGA
GAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGA
CACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACAC
GAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACG
ACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGAC
GAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAA
CAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAA
AAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAA
AAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAG
AA

consensusID : consensus_778#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 91
fasta sequence

                              [GAACAAGCCAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAGACGCCACACCCGAAAACAAAGCCCAACCAGG]

[+] EMBL CNS09JJX             [GAACAAGCCAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAGACGCCACACCCGAAAACAAAGCCCAACCAGG]




>consensus_778#1
GAACAAGCCAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAG
ACGCCACACCCGAAAACAAAGCCCAACCAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_778#0      CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAG 60
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      AAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGC 120
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      CCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAA 180
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      AACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACAC 240
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      CAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGC 300
consensus_778#1      ----------------------------------------------------GAACAAGC 8
                                                                         ********

consensus_778#0      CAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACA 360
consensus_778#1      CAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAGACGCCACA 68
                     ***** ******** ** ********************* **************** ***

consensus_778#0      CCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGA 420
consensus_778#1      CCCGAAAACAAAGCCCAACCAGG------------------------------------- 91
                     *************** *** ***                                     

consensus_778#0      GAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGA 480
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      CACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACAC 540
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      GAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACG 600
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      ACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGAC 660
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      GAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAA 720
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      CAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAA 780
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      AAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAA 840
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      AAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAG 900
consensus_778#1      ------------------------------------------------------------
                                                                                 

consensus_778#0      AA 902
consensus_778#1      --