cluster # 7784

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Anopheles gambiae
cluster # 7784 cluster # 7784 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7784#0 length = 1676 sequences # 6

consensus_7784#1 length = 658 sequences # 1
consensus_7784#2 length = 572 sequences # 1

consensusID : consensus_7784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1676
fasta sequence

                              [GGGAAAGTTTGTTGCCTATTTTGATTGATTCTGTGCTTTTGATTGATGTTTCGCTTTGCTCTTCTTTACTTTTGCGTTCAAGAAGATCCAACAAGGTGTAACATCTCTGTATCTTTCTCTTATGTTCGAAGTTTTGAAGCAAAGCTCCATTAATGGAAAGTCAAGATCGACTTACCACCCTCCCTCGTCAACCAGGGAGTGTGATGATCCTCTCCCCATCTCAACCGCTTGTGTAAAATGTGTATTTATGTTTTCAGCGAGGAACAGGGAGAAGCGAGAATTATGTATGTTCTATATATTTGAAATCTAGTCCAGAAAGCACACACACTAACTTTTAGTTTTTATTCTAATGCTATATTATTGTAATAGCGTGTGTGTTTGTGTGTGTGGGCACGTGTTGACACGGTAAAGATGCTGATCACACATAGAGTTAAAACACACGACAATGGATTAACACTGAACTGAACAGAAGTGAAAACAAAAATACCGTCATACATACACCAATATACACAATTTTCCATGTTTCCAGTACCGATTGTCATAGTTCTAGTTTCGTATTCTGCGCGCCAGAATCCAAAAAATCAAAAAAATTAAATCGTCATCCAATTGGTATACAGTTTTGTATTTAAAAAAAAACCCACATATATCCACACAACCGAATAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTG-TTTTTTTTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGCGAAGGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAATAATTTTCGTTATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTGTGTAGATAAAAAAAAGAAGCACAAGTCAGTAATAAGTACTGCTCCGTGTAGCGGACAGAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTATTACACACCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAGCAAAACAAAAAAATTCAAAAAAAAAAAAGTAAATGTAATAAGCTTACCCACACAGTGGAGATGTGTTGCTACTAGTAGGTCTAGGGAAATGGAGAGGAAAACTTTTGGTGTACATTTCATATTCAAAACAAACGTAAAATGAACCGAGAAGCCAACACAAAACGATGAAATGGAAGAAAACTGTTTTAACAAACACAATTTAAACAAATTACAGCACGCGCGTACGCTCGTGGCGCAGTGTTT]

[+] EMBL BX621857             [GGGAAAGTTTGTTGCCTATTTTGATTGATTCTGTGCTTTTGATTGATGTTTCGCTTTGCTCTTCTTTACTTTTGCGTTCAAGAAGATCCAACAAGGTGTAACATCTCTGTATCTTTCTCTTATGTTCGAAGTTTTGAAGCAAAGCTCCATTAATGGAAAGTCAAGATCGACTTACCACCCTCCCTCGTCAACCAGGGAGTGTGATGATCCTCTCCCCATCTCAACCGCTTGTGTAAAATGTGTATTTATGTTTTCAGCGAGGAACAGGGAGAAGCGAGAATTATGTATGTTCTATATATTTGAAATCTAGTCCAGAAAGCACACACACTAACTTTTAGTTTTTATTCTAATGCTATATTATTGTAATAGCGTGTGTGTTTGTGTGTGTGGGCACGTGTTGACACGGTAAAGATGCTGATCACACATAGAG TAAAACACACGACAATGGATTAACACTGAACTGAACAGAAGTGAAAACAAAAATACCGTCATACATACACCAATATACACAATTTTCCATGTTTTCAGTACCGATTGTCACAGTTCTAGTTTCGTATTCTGCGCGCCAGAATTCAAAAAATCAAAAAATTCAAATCGTCATCCAATTGGTATACAGTTTTGTATT  AAAAAAAACCCACATATATCCATACAACCGAATAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTGNTTTTTTTTTTTGTTCGATAGTAATGGTTTAAACACCAACCAGCGAANGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX623548             [                                                                                                                                                                                                                                                                                                                                                                     TTATTGTAATAGCGTGTGTGTTTGTGTGTGTGGGCACGTGTTGACACGGTAAAGATGCTGATCACACATAGAGTTAAAACACACGACAATGGATTAACACTGAACTGAACAGAAGTGAAAACAAAAATACCGTCATACATACACCAATATACACAATTTTCCATGTTTCCAGTACCGATTGTCATAGTTCTAGTTTCGTATTCTGCGCGCCAGAATCCAAAAAATCAAAAAAATTAAATCGTCATCCAATTGGTATACAGTTTTGTATTTAAAAAAAAACCCACATATATCCACACAACCGAATAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTG  TTTTTTTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGCGAAGGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAATAATTTTCGTTATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGNTGAGCTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX626067             [                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTGATCACACATAGAGTTAAAACACACGACAATGGATTAACACTGAACTGAACAGAAGTGAAAACAAAAATACCGTCATACATACACCAATATACACAATTTTCCATGTTTCCAGTACCGATTGTCATAGTTCTAGTTTCGTATTCTGCGCGCCAGAATCCAAAAAATCAAAAAAATTAAATCGTCATCCAATTGGTATACAGTTTTGTATTTAAAAAAAAACCCACATATATCCACACAACCGAATAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTG TTTTTTTTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGCGAAGGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAATAATTTTCGTTATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTGTGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM598664             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tgATTTTTA CGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTGTGTAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX616915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTATTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGG   CTCTTCACAACCAGTTGAGCTAATGTGTGTAGATAAAAAAAAGAAGCACAAGTCAGTAATAAGTACTGCTCCGTGTAGCGGACAGAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTATTACACACCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAGCAAAACAAAAAAATTCAAAAAAAAAAAAGTAAATGTAATAAGCTTACCCACACAGTGGAGATGTGTTGCTACTAGTAGGTCTAGGGAAATGGAGAGGAAAACTTTTGGTGTACATTTCATATTCAAAACAAACGTAAAATGAACCGAGAAGCCAACACAAAACGATGAAATGGAAGAAAACTGTTTTAACAAACACAATTTAAACAAATTACAGCACGCGCGTACGCTCGTGGCGCAGTGTTT]
[+] EMBL BX617039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTATTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGG   CTCTTCACAACCAGTTGAGCTAATGTGTGTAGATAAAAAAAAGAAGCACAAGTCAGTAATAAGTACTGCTCCGTGTAGCGGACAGAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTAGTACACACCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAGCAAAACAAAAAAATTCAAAAAAAAAAAAGTAAATGTAATAAGCTTACCCACACAGTGGAGATGTGTTGCTACTAGTAGGTCTAGGGAAATGGAGAGGAAAACTTTTGGTGTACATTTCATATTCAAAACAAACGTAAAATGAACCGAGAAGCCAACACAAAACGATGAAATGGAAGAAAACTGTTTTAACAAACACAATTTAA                                        ]




>consensus_7784#0
GGGAAAGTTTGTTGCCTATTTTGATTGATTCTGTGCTTTTGATTGATGTTTCGCTTTGCT
CTTCTTTACTTTTGCGTTCAAGAAGATCCAACAAGGTGTAACATCTCTGTATCTTTCTCT
TATGTTCGAAGTTTTGAAGCAAAGCTCCATTAATGGAAAGTCAAGATCGACTTACCACCC
TCCCTCGTCAACCAGGGAGTGTGATGATCCTCTCCCCATCTCAACCGCTTGTGTAAAATG
TGTATTTATGTTTTCAGCGAGGAACAGGGAGAAGCGAGAATTATGTATGTTCTATATATT
TGAAATCTAGTCCAGAAAGCACACACACTAACTTTTAGTTTTTATTCTAATGCTATATTA
TTGTAATAGCGTGTGTGTTTGTGTGTGTGGGCACGTGTTGACACGGTAAAGATGCTGATC
ACACATAGAGTTAAAACACACGACAATGGATTAACACTGAACTGAACAGAAGTGAAAACA
AAAATACCGTCATACATACACCAATATACACAATTTTCCATGTTTCCAGTACCGATTGTC
ATAGTTCTAGTTTCGTATTCTGCGCGCCAGAATCCAAAAAATCAAAAAAATTAAATCGTC
ATCCAATTGGTATACAGTTTTGTATTTAAAAAAAAACCCACATATATCCACACAACCGAA
TAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCA
CATCGTGACCGATATTGTTTTTTTTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGC
GAAGGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAA
TAATTTTCGTTATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTT
TTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATC
CACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAG
GGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGA
TCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTGTGTAGAT
AAAAAAAAGAAGCACAAGTCAGTAATAAGTACTGCTCCGTGTAGCGGACAGAATACCTAT
ATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTTGAGAGCA
AAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTATTACACACCACATTCAA
ATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCAAACCGCT
TTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAGCAAAACA
AAAAAATTCAAAAAAAAAAAAGTAAATGTAATAAGCTTACCCACACAGTGGAGATGTGTT
GCTACTAGTAGGTCTAGGGAAATGGAGAGGAAAACTTTTGGTGTACATTTCATATTCAAA
ACAAACGTAAAATGAACCGAGAAGCCAACACAAAACGATGAAATGGAAGAAAACTGTTTT
AACAAACACAATTTAAACAAATTACAGCACGCGCGTACGCTCGTGGCGCAGTGTTT

consensusID : consensus_7784#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 658
fasta sequence

                              [GCGTAAAATTACCCGCTCATAAAAGGGGAATAGAGNNTTTGGGGGCGCGCAANAGGCCNTGTTTTGTNTGTTTTTTTTTGGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACANAAGCCGAGCAAAAAGTAAACTTTGTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTGTGTAGATAAAAAAAAAGAAGCACAAGTCAGTAATAAGTCCTGCTCCGTGTAGCGGACAGAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTAGTACACACCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAGCAAAACAAAAAAATTCAAAAAAAAGAAAAAAAAAACAGGCATGTTTCNACCTCGG]

[-] EMBL AL694785             [GCGTAAAATTACCCGCTCATAAAAGGGGAATAGAGNNTTTGGGGGCGCGCAANAGGCCNTGTTTTGTNTGTTTTTTTTTGGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACANAAGCCGAGCAAAAAGTAAACTTTGTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTGTGTAGATAAAAAAAAAGAAGCACAAGTCAGTAATAAGTCCTGCTCCGTGTAGCGGACAGAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTAGTACACACCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAGCAAAACAAAAAAATTCAAAAAAAAGAAAAAAAAAACAGGCATGTTTCNACCTCGG]




>consensus_7784#1
GCGTAAAATTACCCGCTCATAAAAGGGGAATAGAGNNTTTGGGGGCGCGCAANAGGCCNT
GTTTTGTNTGTTTTTTTTTGGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTT
GTACATCCACANAAGCCGAGCAAAAAGTAAACTTTGTTCTTATATTTTCTTCTTCACAAC
TCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTT
TTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATG
TGTGTAGATAAAAAAAAAGAAGCACAAGTCAGTAATAAGTCCTGCTCCGTGTAGCGGACA
GAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAA
CTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTAGTACACA
CCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACA
GCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAA
AAGCAAAACAAAAAAATTCAAAAAAAAGAAAAAAAAAACAGGCATGTTTCNACCTCGG

consensusID : consensus_7784#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGAACCAGTTGAGCTAATGTGTGAAGAGGTACCACCATTGTTTAATTCAAAAAATCAAAAAATTCAAATCGTCATCCAATTGGTATACAGTTTTGTATTAAAAAAAACCCACATATATCCATACAACCGAATAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTGTTTTTTTTTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGCGAAGGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAATAATTTTCGTTATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTAT]

[+] EMBL BM655939             [CCGCCCACGCGTCCGCCCACGCGTCCGAACCAGTTGAGCTAATGTGTGAAGAGGTACCACCATTGTTTAATTCAAAAAATCAAAAAATTCAAATCGTCATCCAATTGGTATACAGTTTTGTATTAAAAAAAACCCACATATATCCATACAACCGAATAAAACGTGTTGCTGCTTACTGAACGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTGTTTTTTTTTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGCGAAGGAAATCAATTTTGACATTCCTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAATAATTTTCGTTATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCTTCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAACTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTTAT]




>consensus_7784#2
CCGCCCACGCGTCCGCCCACGCGTCCGAACCAGTTGAGCTAATGTGTGAAGAGGTACCAC
CATTGTTTAATTCAAAAAATCAAAAAATTCAAATCGTCATCCAATTGGTATACAGTTTTG
TATTAAAAAAAACCCACATATATCCATACAACCGAATAAAACGTGTTGCTGCTTACTGAA
CGATCCAATGACAATGACGTATATAAGAGCTAATCACATCGTGACCGATATTGTTTTTTT
TTTTTGTTCGATAGTAATGTTTTAAACACCAACCAGCGAAGGAAATCAATTTTGACATTC
CTTTCTAGACAGTATTTTTTCTCCAACTATGAAGGAATAATTTTCGTTATGCTATTTTTA
TCGTTATCACTATCTCGTACAGCGCTTAATTTAAGTTTTTTTGTTTGTTTGTTTTCTGCT
TCCATCTAAGAGAACCCCCGATCAACACTTGTACATCCACAAAGCCGAGCAAAAAGTAAA
CTTTTTCTTATATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACA
CAGCCCAGTTGGGTTGAATGAGGAATTTTTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7784#0      GGGAAAGTTTGTTGCCTATTTTGATTGATTCTGTGCTTTTGATTGATGTTTCGCTTTGCT 60
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      CTTCTTTACTTTTGCGTTCAAGAAGATCCAACAAGGTGTAACATCTCTGTATCTTTCTCT 120
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TATGTTCGAAGTTTTGAAGCAAAGCTCCATTAATGGAAAGTCAAGATCGACTTACCACCC 180
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TCCCTCGTCAACCAGGGAGTGTGATGATCCTCTCCCCATCTCAACCGCTTGTGTAAAATG 240
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TGTATTTATGTTTTCAGCGAGGAACAGGGAGAAGCGAGAATTATGTATGTTCTATATATT 300
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TGAAATCTAGTCCAGAAAGCACACACACTAACTTTTAGTTTTTATTCTAATGCTATATTA 360
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TTGTAATAGCGTGTGTGTTTGTGTGTGTGGGCACGTGTTGACACGGTAAAGATGCTGATC 420
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      ACACATAGAGTTAAAACACACGACAATGGATTAACACTGAACTGAACAGAAGTGAAAACA 480
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      AAAATACCGTCATACATACACCAATATACACAATTTTCCATGTTTCCAGTACCGATTGTC 540
consensus_7784#2      ---------------------CCGCCCACGCGTCCGCCCACGCGTCCGA-ACCAGTTGAG 38
consensus_7784#1      -----------------GCGTAAAATTACCCGCTCATAAAAGGGGAATAGAGNNTTTGGG 43
                                                 ** *        * *        *    ***  

consensus_7784#0      ATAGTTCTAGTTTCGTAT------TCTGCGCGCCAGAATCCAAAAAATCAAAAAAATTAA 594
consensus_7784#2      CTAATGTGTGAAGAGGTA------CCACCATTGTTTAATTCAAAAAATCAAAAAATTCAA 92
consensus_7784#1      GGCGCGCAANAGGCCNTGTTTTGTNTGTTTTTTTTTGGTTTTCTGCTTCCATCTAAGAGA 103
                                                            *        ** *   *    *

consensus_7784#0      ATCGTCATCCAATTGGTATACAGTTTTGTATTTAAAAAAAAA-----------CCCACAT 643
consensus_7784#2      ATCGTCATCCAATTGGTATACAGTTTTGTATT--AAAAAAAA-----------CCCACAT 139
consensus_7784#1      ACCCCCGATCAACACTTGTACATCCACANAAGCCGAGCAAAAAGTAAACTTTGTTCTTAT 163
                      * *  *   ***    * ****       *     *  ****             *  **

consensus_7784#0      ATATCCAC----ACAACCGAATAAAACGTGTTGCTG---CTTACTGA-ACGATCCAATGA 695
consensus_7784#2      ATATCCAT----ACAACCGAATAAAACGTGTTGCTG---CTTACTGA-ACGATCCAATGA 191
consensus_7784#1      ATTTTCTTCTTCACAACTCTGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTG 223
                      ** * *      *****     ***  *    **     * **  ** **   *** *  

consensus_7784#0      C----AATGACGTATATAAGAGCTAATCACATCGT--GACCGATATTGTTTTTTTTTTT- 748
consensus_7784#2      C----AATGACGTATATAAGAGCTAATCACATCGT--GACCGATATTGTTTTTTTTTTTT 245
consensus_7784#1      GGTTGAATGAGGAATTTTTATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCAC 283
                           ***** * ** *     *  ***   *  *   * * **  ** *   * **   

consensus_7784#0      GTTCGATAG---TAATGTTT-----TAAACACCAACCAGCGAAGGAAATCAAT---TTTG 797
consensus_7784#2      GTTCGATAG---TAATGTTT-----TAAACACCAACCAGCGAAGGAAATCAAT---TTTG 294
consensus_7784#1      AACCAGTTGAGCTAATGTGTGTAGATAAAAAAAAAGAAGCACAAGTCAGTAATAAGTCCT 343
                         *  * *   ****** *     **** *  **  ***  * *  *  ***   *   

consensus_7784#0      ACATTCCTTTCTAGACAGTAT-----TTTTTCTCCAACTATG---AAGGAATAATTTTCG 849
consensus_7784#2      ACATTCCTTTCTAGACAGTAT-----TTTTTCTCCAACTATG---AAGGAATAATTTTCG 346
consensus_7784#1      GCTCCGTGTAGCGGACAGAATACCTATATTTGTAAAATCGTATCTAAAAGATACATACCA 403
                       *      *    ***** **     * *** *  **   *    **   ***  *  * 

consensus_7784#0      TT--ATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATT-TAAGTTTTTTTG 906
consensus_7784#2      TT--ATGCTATTTTTATCGTTATCACTATCTCGTACAGCGCTTAATT-TAAGTTTTTTTG 403
consensus_7784#1      ACCAATGCAATGGACAACTTGAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGA 463
                          **** **    * * * *   * *      * * *     **  * *     **  

consensus_7784#0      TTTGTTTGTTTTCTGCTTC-CATCTAAGAGAACCCCCGATCAACA----CTTGTACATCC 961
consensus_7784#2      TTTGTTTGTTTTCTGCTTC-CATCTAAGAGAACCCCCGATCAACA----CTTGTACATCC 458
consensus_7784#1      CTAGCGTGTAGTACACACCACATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTG 523
                       * *  ***  *   *  * ***  **  ** ** *        *    **  *  *   

consensus_7784#0      ACAAAGCCGAGCAAAAAGTAAACT-TTTTCTTATATTTTCTTCTTCACAACTC------- 1013
consensus_7784#2      ACAAAGCCGAGCAAAAAGTAAACT-TTTTCTTATATTTTCTTCTTCACAACTC------- 510
consensus_7784#1      TTATTTTGGAGCAAACAGCAAACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACA 583
                        *     ******* ** ****   *** * * * * *    *  ***  *        

consensus_7784#0      TGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTT 1073
consensus_7784#2      TGGAAAGGGAACGGCAAAACCATATAGACACAGCCCAGTTGGGTTGAATGAGGAATTTTT 570
consensus_7784#1      TAGTAAGCACCTCCCAAAAGCAAAACAAAAAAATTCAAAAAAAAGAAAAAAAAAACAGGC 643
                      * * ***       ***** ** *   * * *   **         **  *  **     

consensus_7784#0      ATACAGATCGTTTGATTTAAACAATGGTGGTACCTCTTCACAACCAGTTGAGCTAATGTG 1133
consensus_7784#2      AT---------------------------------------------------------- 572
consensus_7784#1      ATGTTTCNACCTCGG--------------------------------------------- 658
                      **                                                          

consensus_7784#0      TGTAGATAAAAAAAAGAAGCACAAGTCAGTAATAAGTACTGCTCCGTGTAGCGGACAGAA 1193
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TACCTATATTTGTAAAATCGTATCTAAAAGATACATACCAACCAATGCAATGGACAACTT 1253
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      GAGAGCAAAAAGCAAAAACAAACGATCCTGAACCAGTTGACTAGCGTGTATTACACACCA 1313
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      CATTCAAATGAGCCACTTCGTCGTATGGTCTAATGTACTGTTATTTTGGAGCAAACAGCA 1373
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      AACCGCTTTGTAAAACTGTTAGATAAACAGATGGTATACATAGTAAGCACCTCCCAAAAG 1433
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      CAAAACAAAAAAATTCAAAAAAAAAAAAGTAAATGTAATAAGCTTACCCACACAGTGGAG 1493
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      ATGTGTTGCTACTAGTAGGTCTAGGGAAATGGAGAGGAAAACTTTTGGTGTACATTTCAT 1553
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      ATTCAAAACAAACGTAAAATGAACCGAGAAGCCAACACAAAACGATGAAATGGAAGAAAA 1613
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      CTGTTTTAACAAACACAATTTAAACAAATTACAGCACGCGCGTACGCTCGTGGCGCAGTG 1673
consensus_7784#2      ------------------------------------------------------------
consensus_7784#1      ------------------------------------------------------------
                                                                                  

consensus_7784#0      TTT 1676
consensus_7784#2      ---
consensus_7784#1      ---