cluster # 7788

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Anopheles gambiae
cluster # 7788 cluster # 7788 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7788#0 length = 1985 sequences # 5
consensus_7788#1 length = 697 sequences # 1

consensus_7788#2 length = 666 sequences # 1
consensus_7788#3 length = 650 sequences # 1

consensusID : consensus_7788#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1985
fasta sequence

                              [AAATATATGCAACGATCAATCGCTCAAATCGACTGTCTCTGATCGCGCCTGTTGCTTCTACGGGGTTTGGTTTAATATTTATTACTCTGCTATTACAGGTGTGTGTGTGTGTGTGTTGGTAGTTTTGTTTAGAAAACAGAAATAGTTCAAGTTGTAATACTAGTAAATCCAT-TTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGAGTTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGACTTTAAAACGAGTGTATTCTCCTTTGCCAAACACGGAACAAAAGTGATCTTATAAAAAAAATGCAAAATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTACGATATTTACAATGTTTTTCAGTATTAAGCAGCTACTCTTAGGATGAACTTAGTGGTACGAAACGTGTAGTTTACACACGCTTTACAATACAGCACACAAAATCAGGGAAAACAGATCAGCAACTTCTAAAAGTTTTAAAAGAATCGATTAAAACTCTTGAGCTGGTGTTGAGGGAACCTTTTTTCCTACTAATGATGTAAATTAAGAATTGATCCAAAAACTTATGGTAGAAATT--GAAAAAATCACAATAATTATATCTTTACGCTTTAAACGAAATAGTAAACTACTAGAGTACGATACGCTCTTCTTTTTTTGGTTTGTTTCTTTAACATACTCCCTATTGCAAAAATAACTTACACCGCCTAACTTTAGCTTACTTCCCACGTGCGCCTCCTACCATAACCCGGGTAATCATCTTGTTGTGTTCTGTTTTACGGTAGACAGATATAGATTAGAGAATGATGTAAATAATTATCACAACTACAAGTGCTATCGATAGAACTACGATTGCTGTCCACTGTCTCCGGTCGTTGGACATGTGCAGTACCTTTGCCACCTTTTTCATGGTAGCATCGAGCTTGGAATCAGTTTGCTCCAACTCGTTGCCAAACTCGTCCAGCATGGCAGCCTGCTCATCCAGCTCGATGCCAATCTGGCGGGACA-CGTTTTAAGCGTGCCGATCGAATCGCTTATAATGTCCAGCTGCTCGTCCTGTCCGACCAGAATTCTGTGCTGCGTTGCGAGCGTATCCTCGACGAACCGGCTCGAGTTGGAATCGAGCACGGTACCACCGGACGCCGACGGCACATAGTGGCTCGGGCTGTCATCGAGGTTGTTCTCCAGCTTGGAGTACTTCGCCCCACTGTGCCTCGAGGCC-ATCGTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGGTTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCATGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGAAAAAAACTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGGGCATCGTTTAGTTGCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCTCGGTCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGTCGCCCCCG]

[-] EMBL BX624843             [AAATATATGCAACGATCAATCGCTCAAATCGACTGTCTCTGATCGCGCCTGTTGCTTCTACGGGGTTTGGTTTAATATTTATTACTCTGCTATTACAGGTGTGTGTGTGTGTGTGTTGGTAGTTTTGTTTAGAAAACAGAAATAGTTCAAGTTGTAATACTAGTAAATCCAT TTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGAGTTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGATTTTAAAACGGGTGTATTCTCCTTTGCTAAACACGGAACAAAAGTGATCTTAT  AAAAAATGCAAAATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTACGATATTTACAATGTTTTTTAGTGTTAAGTAGCTACTCTTAGGATGAACTTAGTGGTACGAAACGTGTAGTTTACACACGCTTGACGATAGAACACACAAAAGCAGGG AAATAGATTTGCAACTTCTAAAAGTTTTAAAATAATCGATTGAAACTCTTGAGCTGGTGTTGAGTGAACCTTTTGT TTACTAATGATGTAAGTTAAGAATTGATCTAAAAACTTATGGTAAAAGTTTAAAAAAAATCACAATCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08SUJ             [                                                                                                                                                           AATACTAGTAAATCCATATTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGAGTTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGACTTTAAAACGAGTGTATTCTCCTTTGCCAAACACGGAACAAAAGTGATCTTATAAAAAAAATGCAAAATTTGTTTTTTCTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTACGATATTTACAATGTTTTTCAGTATTAAGCAGCTACTCTTAGGATGAACTTAGTGGTACGAAACGTGTAGTTTACACACGCTTTACAATACAGCACACAAAATCAGGGAAAACAGATCAGCAACTTCTAAAAGTTTTAAAAGAATCGATTAAAACTCTTGAGCTGGTGTTGAGGGAACCTTTTTTCCTACTAATGATGTAAATTAAGAATTGATCCAAAAACTTATGGTAGAAATT  GAAAAAATCACAATAATTATATCTTTACGCTTTAAACGAAATAGTAAACTACTAGAGTACGATACGCTCTTCTTTTTTTGGTTTGTTTCTTTAACATACTCCCTATTGCAAAAATAACTTACACCGCCTAACTTTAGCTTACTTCCCACGTGCGCCTCCTACCATAACCCGGGTAATCATCTTGTTGTGTTCTGTTTTACGGTAGACAGATATAGATTAGAGAATGATGTAAATAATTATCACAACTACAAGTGCTATCGATAGAACTACGATTGCTGTCCACTGTCTCCGGTCGTTGGACATGTGCAGTACCTTTGCCACCTTTTTCATGGTAGCATCGAGCTTGGAATCAGTTTGCTCCAACTCGTTGCCAAACTCGTCCAGCATGGCAGCCTGCTCATCCAGCTCGATGCCAATCTGGCGGGACA CGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08N6B             [                                                                                                                                                                 AGTAAATCCAT TTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGAGTTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGACTTTAAAACGAGTGTATTCTCCTTTGCCAAACACGGAACAAAAGTGATCTTATAAAAAAAATGCAAAATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTACGATATTTACAATGTTTTTCAGTATTAAGCAGCTACTCTTAGGATGAACTTAGTAATACGAAACGTGTAGTTTACACACGCTTTACAATACAGCACACAAAATCAGGGAAAACAGATCAGCAACTTCTAAAAGTTTTAAAAGAATCGATTAAAACTCTTGAGCTGGTGTTGAGGGAACCTTTTTTCCTACTAATGATGTAAATTAAGAATTGATCCAAAAACTTATGGTAGAAATT  GAAAAAATCACAATAATTATATCTTTACGCTTTAAACGAAATAGTAAACTACTAGAGTACGATACGCTCTTCTTTTTTTGGTTTGTTTCTTTAACATACTCCCTATTGCAAAAATAACTTACACCGCCTAACTTTAGCTTACTTCCCACGTGCGCCTCCTACCATAACCCGGGTAATCATCTTGTTGTGTTCTGTTTTACGGTAGACAGATATAGATTAGAGAATGATGTAAATAATTATCACAACTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS08SUI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGACATGTGCAGTACCTTTGCCACCTTTTTCATGGTAGCATCGAGCTTGGAATCAGTTTGCTCCAACTCGTTGCCAAACTCGTCCAGCATGGCAGCCTGCTCATCCAGCTCGATGCCAATCTGGCGGGACACCGTTTTAAGCGTGCCGATCGAATCGCTTATAATGTCCAGCTGCTCGTCCTGTCCGACCAGAATTCTGTGCTGCGTTGCGAGCGTATCCTCGACGAACCGGCTCGAGTTGGAATCGAGCACGGTACCACCGGACGCCGACGGCACATAGTGGCTCGGGCTGTCATCGAGGTTGTTCTCCAGCTTGGAGTACTTCGCCCCACTGTGCCTCGAGGCC ATCGTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGGTTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCATGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGAAAAAAACTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGGGCATCGTTTAGTTGCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCTCGGTCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGTCGCCCCCG]
[-] EMBL CNS08N6A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGCCGATCGAATCGCTTATAATGTCCAGCTGCTCGTCCTGTCCGACCAGAATTCTGTGCTGCGTTGCGAGCGTATCCTCGACGAACCGGCTCGAGTTGGAATCGAGCACGGTACCACCGGACGCCGACGGCACATAGTGGCTCGGGCTGTCATCGAGGTTGTTCTCCAGCTTGGAGTACTTCGCCCCACTGTGCCTCGAGGCCAATCGTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGGTTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCGTGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTTCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGGGCATCGTTTAGTT CACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCTCGGTCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCAC             ]




>consensus_7788#0
AAATATATGCAACGATCAATCGCTCAAATCGACTGTCTCTGATCGCGCCTGTTGCTTCTA
CGGGGTTTGGTTTAATATTTATTACTCTGCTATTACAGGTGTGTGTGTGTGTGTGTTGGT
AGTTTTGTTTAGAAAACAGAAATAGTTCAAGTTGTAATACTAGTAAATCCATTTCTCCAT
TTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGAGTTTGTATATGGTTTG
CTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGC
TGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGACTTTAA
AACGAGTGTATTCTCCTTTGCCAAACACGGAACAAAAGTGATCTTATAAAAAAAATGCAA
AATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTAC
GATATTTACAATGTTTTTCAGTATTAAGCAGCTACTCTTAGGATGAACTTAGTGGTACGA
AACGTGTAGTTTACACACGCTTTACAATACAGCACACAAAATCAGGGAAAACAGATCAGC
AACTTCTAAAAGTTTTAAAAGAATCGATTAAAACTCTTGAGCTGGTGTTGAGGGAACCTT
TTTTCCTACTAATGATGTAAATTAAGAATTGATCCAAAAACTTATGGTAGAAATTGAAAA
AATCACAATAATTATATCTTTACGCTTTAAACGAAATAGTAAACTACTAGAGTACGATAC
GCTCTTCTTTTTTTGGTTTGTTTCTTTAACATACTCCCTATTGCAAAAATAACTTACACC
GCCTAACTTTAGCTTACTTCCCACGTGCGCCTCCTACCATAACCCGGGTAATCATCTTGT
TGTGTTCTGTTTTACGGTAGACAGATATAGATTAGAGAATGATGTAAATAATTATCACAA
CTACAAGTGCTATCGATAGAACTACGATTGCTGTCCACTGTCTCCGGTCGTTGGACATGT
GCAGTACCTTTGCCACCTTTTTCATGGTAGCATCGAGCTTGGAATCAGTTTGCTCCAACT
CGTTGCCAAACTCGTCCAGCATGGCAGCCTGCTCATCCAGCTCGATGCCAATCTGGCGGG
ACACGTTTTAAGCGTGCCGATCGAATCGCTTATAATGTCCAGCTGCTCGTCCTGTCCGAC
CAGAATTCTGTGCTGCGTTGCGAGCGTATCCTCGACGAACCGGCTCGAGTTGGAATCGAG
CACGGTACCACCGGACGCCGACGGCACATAGTGGCTCGGGCTGTCATCGAGGTTGTTCTC
CAGCTTGGAGTACTTCGCCCCACTGTGCCTCGAGGCCATCGTGCGCCGGCCGAGCTGATC
AGATGTTTACCCGTTTCGGCAAGGTTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTG
CAGTTGAGCATGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCG
TTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTG
CTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATG
TCCTGGTCACGGTTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGG
GTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTC
GAAAAAAACTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTG
CGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAA
TGGGCATCGTTTAGTTGCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTT
GAATACTTCGCTCTCGGTCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGTCGC
CCCCG

consensusID : consensus_7788#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 697
fasta sequence

                              [GTTTAGCGTGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGATTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGTGCATCGTTTAGTTCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGTCTTTCACCACGAAAAATGGATCTTCCATTCTAGGGATTTAATTCGCGACCGTATCACAAAGCTGTGCTCTCTCATTAATGCACCAATGGACGATGCTGCCGGACGACCACTGTTGCTGCTGCTGCTGATGTTTGCTGCTTTCCACTGGCAATCTCGTGCAATTTCACCAATTTCTTATGGCTGCCTGCGCTGGAAGTCATTGGACACGG]

[-] EMBL BM649683             [GTTTAGCGTGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGATTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGTGCATCGTTTAGTTCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGTCTTTCACCACGAAAAATGGATCTTCCATTCTAGGGATTTAATTCGCGACCGTATCACAAAGCTGTGCTCTCTCATTAATGCACCAATGGACGATGCTGCCGGACGACCACTGTTGCTGCTGCTGCTGATGTTTGCTGCTTTCCACTGGCAATCTCGTGCAATTTCACCAATTTCTTATGGCTGCCTGCGCTGGAAGTCATTGGACACGG]




>consensus_7788#1
GTTTAGCGTGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTT
CAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCT
TTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTC
CTGGTCACGATTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGT
GGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGG
ATTTTTCTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCG
GAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATG
TGCATCGTTTAGTTCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAA
TACTTCGTCTTTCACCACGAAAAATGGATCTTCCATTCTAGGGATTTAATTCGCGACCGT
ATCACAAAGCTGTGCTCTCTCATTAATGCACCAATGGACGATGCTGCCGGACGACCACTG
TTGCTGCTGCTGCTGATGTTTGCTGCTTTCCACTGGCAATCTCGTGCAATTTCACCAATT
TCTTATGGCTGCCTGCGCTGGAAGTCATTGGACACGG

consensusID : consensus_7788#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence

                              [CTCGTCCTGTCCGACCAGAATTCTGTGCTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGATTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCGTGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGTAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGTGCATCGTTTAGTTCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCTCGATCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGCGCCGCTTCGCGCACGGTTTCCGG]

[-] EMBL BM577850             [CTCGTCCTGTCCGACCAGAATTCTGTGCTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGATTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCGTGGAGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTATCGAGTAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGTGCATCGTTTAGTTCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCTCGATCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGCGCCGCTTCGCGCACGGTTTCCGG]




>consensus_7788#2
CTCGTCCTGTCCGACCAGAATTCTGTGCTGCGCCGGCCGAGCTGATCAGATGTTTACCCG
TTTCGGCAAGATTTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCGTGG
AGGAGCTGCTGCTGTGTAGCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCA
CACCACCACCGTTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCT
GCGGCGACGATTCGACGTTATCGAGTAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGT
TGCGGCTGATGCTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGA
AATACCGGCGGCTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTA
CAATACTAATAGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCT
TCAGTTCAGTCGTTGTCCAGTCGGCCTCGGCAGTTGATCCACCCGAATGTGCATCGTTTA
GTTCACGCCAGCGAATGTACAACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCT
CGATCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGCGCCGCTTCGCGCACGGT
TTCCGG

consensusID : consensus_7788#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence

                              [ACTAGTAAATCCATTTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGATTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGATTTTAAAACGGGTGTATTCTCCTTTGCTAAACACGGAACAAAAGTGATCTTATAAAAAATGCAAAATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTACGATATTTACAATGTTTTTTAGTGTTAAGTAGCTACTCTTAGGATGAACTTAGTGGTACGAAACGTGTAGTTTACACACGCTTGACGATAGAACACACAAAGCAGGGAAATAGATTTGCAACTTCTAAAAGTTTTAAAATAATCGATTGAAACTCTTGAGCTGGTGTTGAGTGAACCTTTTGTTTACTAATGATGTAAGTTAAGAATTGATCTAAAAACTTATGGTAAAAGTTTAAAAAAAATCACATCATTATACCTTTACGCTTTAAACGAAGTAGTAAACTACTAGTAAACTACGATACGCTCTTCCTTTTTTTTGTTAACCTCGGGGC]

[-] EMBL AL931914             [ACTAGTAAATCCATTTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGATTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTCACCAGAGGAATGGGATTTTAAAACGGGTGTATTCTCCTTTGCTAAACACGGAACAAAAGTGATCTTATAAAAAATGCAAAATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCCAATACGAAATGATGAGTACGATATTTACAATGTTTTTTAGTGTTAAGTAGCTACTCTTAGGATGAACTTAGTGGTACGAAACGTGTAGTTTACACACGCTTGACGATAGAACACACAAAGCAGGGAAATAGATTTGCAACTTCTAAAAGTTTTAAAATAATCGATTGAAACTCTTGAGCTGGTGTTGAGTGAACCTTTTGTTTACTAATGATGTAAGTTAAGAATTGATCTAAAAACTTATGGTAAAAGTTTAAAAAAAATCACATCATTATACCTTTACGCTTTAAACGAAGTAGTAAACTACTAGTAAACTACGATACGCTCTTCCTTTTTTTTGTTAACCTCGGGGC]




>consensus_7788#3
ACTAGTAAATCCATTTCTCCATTTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTG
TGGGGATTTGTATATGGTTTGCTTATATGGAACGTATGACTAGAACGAAATCTTTACTGC
TCCCAGAAGGATTAAATAAGCTGATGATGATATTCGCAAGAACCGATTGAAATATCATTC
ACCAGAGGAATGGGATTTTAAAACGGGTGTATTCTCCTTTGCTAAACACGGAACAAAAGT
GATCTTATAAAAAATGCAAAATTAGACCGGACTTATCAAACCTGAGCAGATGATCCCGCC
AATACGAAATGATGAGTACGATATTTACAATGTTTTTTAGTGTTAAGTAGCTACTCTTAG
GATGAACTTAGTGGTACGAAACGTGTAGTTTACACACGCTTGACGATAGAACACACAAAG
CAGGGAAATAGATTTGCAACTTCTAAAAGTTTTAAAATAATCGATTGAAACTCTTGAGCT
GGTGTTGAGTGAACCTTTTGTTTACTAATGATGTAAGTTAAGAATTGATCTAAAAACTTA
TGGTAAAAGTTTAAAAAAAATCACATCATTATACCTTTACGCTTTAAACGAAGTAGTAAA
CTACTAGTAAACTACGATACGCTCTTCCTTTTTTTTGTTAACCTCGGGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7788#0      AAATATATGCAACGATCAATCGCTCAAATCGACTGTCTCTGATCGCGCCTGTTGCTTCTA 60
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------CTCGTCCTGTCC 12
                                                                                  

consensus_7788#0      CGGGGTTTGGTTTAATATTTATTACTCTGCTATTACAGGTGTGTGTGTGTGTGTGTTGGT 120
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      GACCAGAATTCTGTGCTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGAT 72
                                                                                  

consensus_7788#0      AGTTTTGTTTAGAAAACAGAAATAGTTCAAGTTGTAATACTAGTAAATCCATTTCTCCAT 180
consensus_7788#3      --------------------------------------ACTAGTAAATCCATTTCTCCAT 22
consensus_7788#1      -------------------------------------GTTTAGCGTGGAGGAGCTGCTGC 23
consensus_7788#2      TTAGATTGTTCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCGTGGAGGAGCTGCTGC 132
                                                               **             *   

consensus_7788#0      TTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGAGTTTGTATATGGTTTG 240
consensus_7788#3      TTTGTTTGCATACACTCTTTCGCCATCTTACGTGTGTGTGGGGA-TTTGTATATGGTTTG 81
consensus_7788#1      TGTGTA-GCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCG 82
consensus_7788#2      TGTGTA-GCCCACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCG 191
                      * ***  **  **   *    *     **      **   *         *        *

consensus_7788#0      CTT-ATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAG 299
consensus_7788#3      CTT-ATATGGAACGTATGACTAGAACGAAATCTTTACTGCTCCCAGAAGGATTAAATAAG 140
consensus_7788#1      TTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGAT 142
consensus_7788#2      TTTGATATGATGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGAT 251
                       ** *****   *   **      * * * * *** **   *       *     *  * 

consensus_7788#0      CTGATGATGATATTCGCAAG--AACCGATTGAAATATCAT--TCACCAGAGGAATGGGAC 355
consensus_7788#3      CTGATGATGATATTCGCAAG--AACCGATTGAAATATCAT--TCACCAGAGGAATGGGAT 196
consensus_7788#1      TCGACGTTATCGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGATTGCGGCTGATG 202
consensus_7788#2      TCGACGTTATCGAGTAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTGCGGCTGATG 311
                        ** * *           *    * *   * *** ** *  ****    *     *   

consensus_7788#0      TTTAAAACGAGTGTATTCTCCTTTGCCAAACACGGAACAAAAGTGATCTTATAAAAAAAA 415
consensus_7788#3      TTTAAAACGGGTGTATTCTCCTTTGCTAAACACGGAACAAAAGTGATCTTATAAAAA--A 254
consensus_7788#1      CTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGG 262
consensus_7788#2      CTCATGCGATCCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGG 371
                       * *         *  **  ***  *   *  * *         ***   ***       

consensus_7788#0      -TGCAAAATTA--GACCGGACTTATCAAACCTGAGCAGATGATCCCGC-CAATACGAAAT 471
consensus_7788#3      -TGCAAAATTA--GACCGGACTTATCAAACCTGAGCAGATGATCCCGC-CAATACGAAAT 310
consensus_7788#1      CTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAA-T 321
consensus_7788#2      CTGGAAAGTTCCCGGTTGTCGATCTTGAATTTGCTCGGATTTTTCTCTACAATACTAA-T 430
                       ** *** **   *   *    * *  **  **  * ***  * *    ****** ** *

consensus_7788#0      GATGAGTACGATATTTAC--AATGTTTTTCAGTATTAAGCAGCTA-CTCTTAGGATGAAC 528
consensus_7788#3      GATGAGTACGATATTTAC--AATGTTTTTTAGTGTTAAGTAGCTA-CTCTTAGGATGAAC 367
consensus_7788#1      AGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGT 381
consensus_7788#2      AGTGTCCTCTAGATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGT 490
                        **    * * ** * *  ***    **   *  *  * *** *  ****  * * *  

consensus_7788#0      --TTAGTGGTACGAAACGTGTAGTTTACACACGCTTTACAATACAGCACACAAAATCAGG 586
consensus_7788#3      --TTAGTGGTACGAAACGTGTAGTTTACACACGCTTGACGATAGAACACACAAAGC--AG 423
consensus_7788#1      CGTTGTCCAGTCGGCCTCGGCAGTTGATCCA--CCCGAATGTGCATCGTTTAGTTC--AC 437
consensus_7788#2      CGTTGTCCAGTCGGCCTCGGCAGTTGATCCA--CCCGAATGTGCATCGTTTAGTTC--AC 546
                        **       **      * **** *  **  *   *   *  * *    *        

consensus_7788#0      GAAAACAGATCAGCAACTTCTAAAAGTTTTAAAAGAATCGATTAAAACTCTTGAGCTGGT 646
consensus_7788#3      GGAAATAGATTTGCAACTTCTAAAAGTTTTAAAATAATCGATTGAAACTCTTGAGCTGGT 483
consensus_7788#1      GCCAGCGAATGTACAAC--CCACGTGTTTTA--TTCAATGCTTTGAATACTTCGTCTTTC 493
consensus_7788#2      GCCAGCGAATGTACAAC--CCACGTGTTTTA--TTCAATGCTTTGAATACTTCG-CTCTC 601
                      *  *    **   ****  * *   ******     *  * **  **  ***   **   

consensus_7788#0      GTTGAGGGAACCTTTTTTCCTACT--AATGATGTAAATTAAGAATTGATCCAAAAACT-- 702
consensus_7788#3      GTTGAGTGAACCTTTTGTT-TACT--AATGATGTAAGTTAAGAATTGATCTAAAAACT-- 538
consensus_7788#1      ACCACGAAAAATGGATCTTCCATTCTAGGGATTTAATTCGCGACCGTATCACAAAGCTGT 553
consensus_7788#2      GATCCGTCCAGTGGGGGAAAAACTTCGGCTTCCTCACATTGCGCCGCTTCGCGCA-CGGT 660
                           *   *           * *         * *            **    * *   

consensus_7788#0      --TATGGTAGAAATT--GAAAAAATCACAATAATTATATCTTTAC-GCTTTAAACGAAAT 757
consensus_7788#3      --TATGGTAAAAGTTTAAAAAAAATCACA-TCATTATACCTTTAC-GCTTTAAACGAAGT 594
consensus_7788#1      GCTCTCTCATTAATGCACCAATGGACGATGCTGCCGGACGACCACTGTTGCTGCTGCTGC 613
consensus_7788#2      TTCCGG------------------------------------------------------ 666
                                                                                  

consensus_7788#0      AGTAAACTACTAG---AGTACGATACGCTCTTCTTTTTTTGGTTTGTTTCTTTAACATAC 814
consensus_7788#3      AGTAAACTACTAGTAAACTACGATACGCTCTTCCTTTTTTTTGTTAACCTCGGGGC---- 650
consensus_7788#1      TGATGTTTGCTGCTTTCCACTGGCAATCTCGTGCAATTTCACCAATTTCTTATGGCTGCC 673
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      TCCCTATTGCAAAAATAACTTACACCGCCTAACTTTAGCTTACTTCCCACGTGCGCCTCC 874
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      TGCGCTGGAAGTCATTGGACACGG------------------------------------ 697
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      TACCATAACCCGGGTAATCATCTTGTTGTGTTCTGTTTTACGGTAGACAGATATAGATTA 934
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      GAGAATGATGTAAATAATTATCACAACTACAAGTGCTATCGATAGAACTACGATTGCTGT 994
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CCACTGTCTCCGGTCGTTGGACATGTGCAGTACCTTTGCCACCTTTTTCATGGTAGCATC 1054
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      GAGCTTGGAATCAGTTTGCTCCAACTCGTTGCCAAACTCGTCCAGCATGGCAGCCTGCTC 1114
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      ATCCAGCTCGATGCCAATCTGGCGGGACACGTTTTAAGCGTGCCGATCGAATCGCTTATA 1174
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      ATGTCCAGCTGCTCGTCCTGTCCGACCAGAATTCTGTGCTGCGTTGCGAGCGTATCCTCG 1234
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      ACGAACCGGCTCGAGTTGGAATCGAGCACGGTACCACCGGACGCCGACGGCACATAGTGG 1294
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CTCGGGCTGTCATCGAGGTTGTTCTCCAGCTTGGAGTACTTCGCCCCACTGTGCCTCGAG 1354
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      GCCATCGTGCGCCGGCCGAGCTGATCAGATGTTTACCCGTTTCGGCAAGGTTTAGATTGT 1414
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      TCACCTGGCTGTTGTTGTTCAGGTTGCAGTTGAGCATGGAGGAGCTGCTGCTGTGTAGCC 1474
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CACCGCCGGCGGTACCGTTGTTGCCGTTCAGCACGGCCACACCACCACCGTTTGATATGA 1534
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      TGCTGTTGTTGTTGATGTAGTTTTTGCTTTGCAGCTGCTGCGGCGACGATTCGACGTTAT 1594
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CGAGCAGCGGCTGGCGGGCGGTAATGTCCTGGTCACGGTTGCGGCTGATGCTCATGCGAT 1654
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CCTTCATCGACTTCACCTCATCCCGGGTGGCGTCGATGAAATACCGGCGGCTGGAAAGTT 1714
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CCCGGTTGTCGATCTTGAATTTGCTCGAAAAAAACTCTACAATACTAATAGTGTCCTCTA 1774
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      GATCTTCCAAATCCCATTCGATGCTGCGGAGCGAGTTCTTCAGTTCAGTCGTTGTCCAGT 1834
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      CGGCCTCGGCAGTTGATCCACCCGAATGGGCATCGTTTAGTTGCACGCCAGCGAATGTAC 1894
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      AACCCACGTGTTTTATTCAATGCTTTGAATACTTCGCTCTCGGTCCGTCCAGTGGGGGAA 1954
consensus_7788#3      ------------------------------------------------------------
consensus_7788#1      ------------------------------------------------------------
consensus_7788#2      ------------------------------------------------------------
                                                                                  

consensus_7788#0      AAACTTCGGCTTCCTCACATTGTCGCCCCCG 1985
consensus_7788#3      -------------------------------
consensus_7788#1      -------------------------------
consensus_7788#2      -------------------------------