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Anopheles gambiae
cluster # 7790 cluster # 7790       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7790#0 length = 1206 sequences # 2  
consensus_7790#1 length = 970 sequences # 1  
consensus_7790#2 length = 861 sequences # 3  
consensus_7790#3 length = 567 sequences # 1  
consensus_7790#4 length = 275 sequences # 1  

consensusID : consensus_7790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1206
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGTGATACAGCTCATGATGTGTGGCAGTTTGGCATAGTTTGTTTTGTATGTCTAACAGGGTGTTTGCCTTGGCAAAAAGCATCCACAGACGATCCTCGATATAATCGCTACCAACAATGGCATCAAGCAACACTCACCTTTCCGATGAAACGATGTCCAAAACTGTTCAAGCTGCTCTCTGCTAGAGCATGTAAACTGTTTAAGAAGTTTTTGGATCCTCGTTCGGATAGACGTTTAAAGACTCTAAGCGATTTGCAAAAATTTATCGATGATCGATGGCTAGCAAAATCGGCTGAAAAGGAAATGGCTGAAAACGAGCCCGATGAATTGTGCCCTTCGATGTATTCTTTCCACAGTAGCGTCGAGGAAAAAAATAAGCTACTAGGAACTCTGGCACAATGTGGCATCGAGACAACAGTTGATCGTGCTGCTAAGAAAAATCGTATACGAGATTGGATTCAATCGTCTGTCATCGTAGAGGAAGAGGAAGAGGATGATTCAGGATCAGCCACTCCTTCATCCACCGTTTCTAGAACTGCTGTTCCTGGACATGTTTCATCGGTGGCCGCTATGGAACGAGCGGAGAAAAAAATTAACACAACAGTAAAGGAGGCATCACAAAAACACATCGATCCACGTACCGGCACCGTTCAAGTCGGCCCCAGTTAGATGGGATCTATTAATGCTCATAAAAATAACAATAATCGGTCTCCACCAAACATTAACGGACACACGATATTGTCAAACTCTAGCAAACCTAATCTCCTCTTAGCTACGCATGGCCTCGTAAAGGTGGCATTTAGTTCGGTTGCATCAGTTCCGTTACCGCAAATCAATCGTAGCGATTTAGCCAATAAAAAGATCAATATGGAGGACAGTGGCTACGGTAGTATAAACGGTACCCATAAGAATAGATCATATTCCAATAAAATTTCAAAATCGCCGACACTACCTAAACGATCTACTTTCATACGATCTGAAAATAATCCTTCGGAAGATATGGAATCATCAGAAGAACGCGACAGTCAAAGCTTAGAGTTTGACGAGCTAGAAACAGATCGCGGATCGGATGGTTTTGTTAATGCATTGCATGAAAAACGAAAGTCAGAGAAAAGGCAAGAGAGCACCTATGATAAGCTCTTCTTTCGAAGAAATAGTTGCAACTCGTCTGTACATTTTCT]

[+] EMBL BM609168             [CCGCCCACGCGTCCGCCCACGCGTCCGTGATACAGCTCATGATGTGTGGCAGTTTGGCATAGTTTGTTTTGTATGTCTAACAGGGTGTTTGCCTTGGCAAAAAGCATCCACAGACGATCCTCGATATAATCGCTACCAACAATGGCATCAAGCAACACTCACCTTTCCGATGAAACGATGTCCAAAACTGTTCAAGCTGCTCTCTGCTAGAGCATGTAAACTGTTTAAGAAGTTTTTGGATCCTCGTTCGGATAGACGTTTAAAGACTCTAAGCGATTTGCAAAAATTTATCGATGATCGATGGCTAGCAAAATCGGCTGAAAAGGAAATGGCTGAAAACGAGCCCGATGAATTGTGCCCTTCGATGTATTCTTTCCACAGTAGCGTCGAGGAAAAAAATAAGCTACTAGGAACTCTGGCACAATGTGGCATCGAGACAACAGTTGATCGTGCTGCTAAGAAAAATCGTATACGAGATTGGATTCAATCGTCTGTCATCGTAGAGGAAGAGGAAGAGGATGATTCAGGATCAGCCACTCCTTCATCCACCGTTTCTAGAACTGCTGTTCCTGGACATGTTTCATCGGTGGCCGCTATGGAACGAGCGGAGAAAAAAATTAACACAACAGTAAAGGAGGCATCACAAAAACACATCGATCCACGTACCGGCACCGTTCAAGTCGGCCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX613343             [                                                                                                                                                                                                                                                                                                                               GAAAAGGAAATGGCTGAAAACGAGCCCGATGAATTGTGCCCTTCGATGTATTCTTTCCACAGTAGCGTCGAGGAAAAAAATAAGCTACTAGGAACTCTGGCACAATGTGGCATCGAGACAACAGTTGATCGTGCTGCTAAGAAAAATCGTATACGAGATTGGATTCAATCGTCTGTCATCGTAGAGGAAGAGGAAGAGGATGATTCAGGATCAGCCACTCCTTCATCCACCGTTTCTAGAACTGCTGTTCCTGGACATGTTTCATCGGTGGCCGCTATGGAACGAGCGGAGAAAAAAATTAACACAACAGTAAAGGAGGCATCACAAAAACACATCGATCCACGTACCGGCACCGTTCAAGTCGGCCCAAGTTAGATGGGATCTATTAATGCTCATAAAAATAACAATAATCGGTCTCCACCAAACATTAACGGACACACGATATTGTCAAACTCTAGCAAACCTAATCTCCTCTTAGCTACGCATGGCCTCGTAAAGGTGGCATTTAGTTCGGTTGCATCAGTTCCGTTACCGCAAATCAATCGTAGCGATTTAGCCAATAAAAAGATCAATATGGAGGACAGTGGCTACGGTAGTATAAACGGTACCCATAAGAATAGATCATATTCCAATAAAATTTCAAAATCGCCGACACTACCTAAACGATCTACTTTCATACGATCTGAAAATAATCCTTCGGAAGATATGGAATCATCAGAAGAACGCGACAGTCAAAGCTTAGAGTTTGACGAGCTAGAAACAGATCGCGGATCGGATGGTTTTGTTAATGCATTGCATGAAAAACGAAAGTCAGAGAAAAGGCAAGAGAGCACCTATGATAAGCTCTTCTTTCGAAGAAATAGTTGCAACTCGTCTGTACATTTTCT]


>consensus_7790#0 CCGCCCACGCGTCCGCCCACGCGTCCGTGATACAGCTCATGATGTGTGGCAGTTTGGCAT AGTTTGTTTTGTATGTCTAACAGGGTGTTTGCCTTGGCAAAAAGCATCCACAGACGATCC TCGATATAATCGCTACCAACAATGGCATCAAGCAACACTCACCTTTCCGATGAAACGATG TCCAAAACTGTTCAAGCTGCTCTCTGCTAGAGCATGTAAACTGTTTAAGAAGTTTTTGGA TCCTCGTTCGGATAGACGTTTAAAGACTCTAAGCGATTTGCAAAAATTTATCGATGATCG ATGGCTAGCAAAATCGGCTGAAAAGGAAATGGCTGAAAACGAGCCCGATGAATTGTGCCC TTCGATGTATTCTTTCCACAGTAGCGTCGAGGAAAAAAATAAGCTACTAGGAACTCTGGC ACAATGTGGCATCGAGACAACAGTTGATCGTGCTGCTAAGAAAAATCGTATACGAGATTG GATTCAATCGTCTGTCATCGTAGAGGAAGAGGAAGAGGATGATTCAGGATCAGCCACTCC TTCATCCACCGTTTCTAGAACTGCTGTTCCTGGACATGTTTCATCGGTGGCCGCTATGGA ACGAGCGGAGAAAAAAATTAACACAACAGTAAAGGAGGCATCACAAAAACACATCGATCC ACGTACCGGCACCGTTCAAGTCGGCCCCAGTTAGATGGGATCTATTAATGCTCATAAAAA TAACAATAATCGGTCTCCACCAAACATTAACGGACACACGATATTGTCAAACTCTAGCAA ACCTAATCTCCTCTTAGCTACGCATGGCCTCGTAAAGGTGGCATTTAGTTCGGTTGCATC AGTTCCGTTACCGCAAATCAATCGTAGCGATTTAGCCAATAAAAAGATCAATATGGAGGA CAGTGGCTACGGTAGTATAAACGGTACCCATAAGAATAGATCATATTCCAATAAAATTTC AAAATCGCCGACACTACCTAAACGATCTACTTTCATACGATCTGAAAATAATCCTTCGGA AGATATGGAATCATCAGAAGAACGCGACAGTCAAAGCTTAGAGTTTGACGAGCTAGAAAC AGATCGCGGATCGGATGGTTTTGTTAATGCATTGCATGAAAAACGAAAGTCAGAGAAAAG GCAAGAGAGCACCTATGATAAGCTCTTCTTTCGAAGAAATAGTTGCAACTCGTCTGTACA TTTTCT



consensusID : consensus_7790#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 970
fasta sequence
                              [GCAGAATCCCCCCGCGGTTAAGAAGCATCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATACGTGCAACTGACACCGAGATGGTACCTGAAGCTTACTACCAAAACGTATCGTTTCGCGATACCGATTTTTACAAGGGAATTTCACTATCAGTACTTATGACTGGGGCAACATAAAAAATATTGTANACACTATATGATGTAGCTTATCGAAAAGACTAGGGATTNTTACTACAGGTAATATTAAGCCCCAAAGGAAGTAACGACCCCCATATACGTAAATAACCCCCTCANGGGAGGATNTCCACAAAATTGGGAAGAGACCTCTTCTAATTTCNACAACNCTACTCTGGGGCACAGGTTTCTGCCTGGNGANATAACTTTCANGGCACAGAGAAGGAATNCATTGGANACCNATTCCTTAAAANTAGGTTATATATACACCGGCACCACACATNGGGGCCACTTTCTGGGAAGGCATTCCGTAANAGTNATACAATAAACGACGGAATCAACTTNTTCACTCAGCNTTCAACAAACNAAAACNAGGCTCAGGTANTAAGTAGGGTGAATNCCNGGGTTACCAGGCANACTANACTGGCCACGGGTTAAATTNTAAANGAAACCACTCAACTCGGCTNGGACACANCAACAGACGGGGGGCGGAAAAACGNATCGCTGTANGGCAAAGACCAAAGCGCCACACAACANGGACATAGGACGCCGGCAAGGCGGGANATTACCACNCGGCACAGGACACCCGCGCTACAAACACAGGGCAACAACCATGGCGGACCCAACTACCCCCACNAAACCCACGCACACCCCCCNNTCGCCGCCACACGCACCGCGCCATCACNACTGGCCATAGGCCGCNTACACGCACGNCAACAACC]

[+] EMBL AL694757             [GCAGAATCCCCCCGCGGTTAAGAAGCATCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATACGTGCAACTGACACCGAGATGGTACCTGAAGCTTACTACCAAAACGTATCGTTTCGCGATACCGATTTTTACAAGGGAATTTCACTATCAGTACTTATGACTGGGGCAACATAAAAAATATTGTANACACTATATGATGTAGCTTATCGAAAAGACTAGGGATTNTTACTACAGGTAATATTAAGCCCCAAAGGAAGTAACGACCCCCATATACGTAAATAACCCCCTCANGGGAGGATNTCCACAAAATTGGGAAGAGACCTCTTCTAATTTCNACAACNCTACTCTGGGGCACAGGTTTCTGCCTGGNGANATAACTTTCANGGCACAGAGAAGGAATNCATTGGANACCNATTCCTTAAAANTAGGTTATATATACACCGGCACCACACATNGGGGCCACTTTCTGGGAAGGCATTCCGTAANAGTNATACAATAAACGACGGAATCAACTTNTTCACTCAGCNTTCAACAAACNAAAACNAGGCTCAGGTANTAAGTAGGGTGAATNCCNGGGTTACCAGGCANACTANACTGGCCACGGGTTAAATTNTAAANGAAACCACTCAACTCGGCTNGGACACANCAACAGACGGGGGGCGGAAAAACGNATCGCTGTANGGCAAAGACCAAAGCGCCACACAACANGGACATAGGACGCCGGCAAGGCGGGANATTACCACNCGGCACAGGACACCCGCGCTACAAACACAGGGCAACAACCATGGCGGACCCAACTACCCCCACNAAACCCACGCACACCCCCCNNTCGCCGCCACACGCACCGCGCCATCACNACTGGCCATAGGCCGCNTACACGCACGNCAACAACC]


>consensus_7790#1 GCAGAATCCCCCCGCGGTTAAGAAGCATCACAAAATTCGCGAGTTTGAGCTTGACAAAGT GGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAAT ATTACTCGTGGAACATACGTGCAACTGACACCGAGATGGTACCTGAAGCTTACTACCAAA ACGTATCGTTTCGCGATACCGATTTTTACAAGGGAATTTCACTATCAGTACTTATGACTG GGGCAACATAAAAAATATTGTANACACTATATGATGTAGCTTATCGAAAAGACTAGGGAT TNTTACTACAGGTAATATTAAGCCCCAAAGGAAGTAACGACCCCCATATACGTAAATAAC CCCCTCANGGGAGGATNTCCACAAAATTGGGAAGAGACCTCTTCTAATTTCNACAACNCT ACTCTGGGGCACAGGTTTCTGCCTGGNGANATAACTTTCANGGCACAGAGAAGGAATNCA TTGGANACCNATTCCTTAAAANTAGGTTATATATACACCGGCACCACACATNGGGGCCAC TTTCTGGGAAGGCATTCCGTAANAGTNATACAATAAACGACGGAATCAACTTNTTCACTC AGCNTTCAACAAACNAAAACNAGGCTCAGGTANTAAGTAGGGTGAATNCCNGGGTTACCA GGCANACTANACTGGCCACGGGTTAAATTNTAAANGAAACCACTCAACTCGGCTNGGACA CANCAACAGACGGGGGGCGGAAAAACGNATCGCTGTANGGCAAAGACCAAAGCGCCACAC AACANGGACATAGGACGCCGGCAAGGCGGGANATTACCACNCGGCACAGGACACCCGCGC TACAAACACAGGGCAACAACCATGGCGGACCCAACTACCCCCACNAAACCCACGCACACC CCCCNNTCGCCGCCACACGCACCGCGCCATCACNACTGGCCATAGGCCGCNTACACGCAC GNCAACAACC



consensusID : consensus_7790#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 861
fasta sequence
                              [CCGCGCGATCTGACGTGTTAGTTCTATTCACTTACGGCAATGTTCAACCTAACATTGTAGTCACTTATCATCATTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATTACGGAAGAATTCAAACTATGGTAGCATATGCTTTACCTTCATGTTCGTGTCTAAAAACTAAACATCAAACGCGAATAAAATGGCTACATCCAAGAAATCTGCAGGAAGCATCCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATCGTGCAACTGACACCGAGATGGTCCTGAAGCTTCTACCGAAACCGTTCGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGAGATCTGACATCTAATGTTTCCGACAATGGCATTGGTGAGCTACATACAAAGCGCGTTGCAAGACAACTTGCTTCGGCGATCGATTATATTCATCAAAAAGATCTAATTCATAGAGATATTAAACTAGACAATGTGTTAGTGTTTCGCTCAGACTTTGCACGTATTAAACTATGTGATTTTGGCGAATCTAGAAAGCTAGGTGAGGAGGTTCTGAGACGTAATGAATGGCTTCCATACAGCCCTCCAGAAGTTTTGCTGGTAAAAACGGATGATAAATACAAGACTGATACAGCTCATGATGTGTGGCAGTTTGGCATAGTTTGTTTTGTATGTCT]

[+] EMBL BM650397             [CCGCGCGATCTGACGTGTTAGTTCTATTCACTTACGGCAATGTTCAACCTAACATTGTAGTCACTTATCATCATTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATTACGGAAGAATTCAAACTATGGTAGCATATGCTTTACCTTCATGTTCGTGTCTAAAAACTAAACATCAAACGCGAATAAAATGGCTACATCCAAGAAATCTGCAGGAAGCATCCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTCGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAGCATCGTGCAACTGACACCGAGATGGTCCTGAAGCTTCTACCGAAACCGTTTGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGAGATCTGACATCTAATGTTTCCGACAATGGCATTGGTGAGCTACATACAAAGCGCGTTGCAAGACAACTTGCTTCGGCGATCGATTATATT                                                                                                                                                                                                                                                     ]
[+] EMBL BX620809             [                                                                                                                                                                                                                 CCAAGAAATCTGCAGGAAGCATCCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATCGTGCAACTGACACCGAGATGGTCCTGAAGCTTCTACCGAAACCGTTCGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGAGATCTGACATCTAATGTTTCCGACAATGGCATTGGTGAGCTACATACAAAGCGCGTTGCAAGACAACTTGCTTCGGCGATCGATTATATTCATCAAAAAGATCTAATTCATAGAGATATTAAACTAGACAATGTGTTAGTGTTTCGCTCAGACTTTGCACGTATTAAACTATGTGATTTTGGCGAATCTAGAAAGCTAGGTGAGGAGGTTCTGAGACGTAATGAATGGCTTCCATACAGCCCTCCAGAAGTTTTGCTGGTAAAAACGGATGATAAATACAAGACTGATACAGCTCATGATGTGTGGCAGTTTGGCATAGTTTGTTTTGTATGTCT]
[+] EMBL BX620895             [                                                                                                                                                                                                                                           AAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACNAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATCGTGCAACTGACACCGAGATGGTCCTGAAGCTTCTACCAAAACCGTTCGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATT                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_7790#2 CCGCGCGATCTGACGTGTTAGTTCTATTCACTTACGGCAATGTTCAACCTAACATTGTAG TCACTTATCATCATTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATT ACGGAAGAATTCAAACTATGGTAGCATATGCTTTACCTTCATGTTCGTGTCTAAAAACTA AACATCAAACGCGAATAAAATGGCTACATCCAAGAAATCTGCAGGAAGCATCCACAAAAT TCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGT TGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATCGTGCAACTGACACCGAGAT GGTCCTGAAGCTTCTACCGAAACCGTTCGTTTCGCTTACCGATTTTTACAAGGAATTTCA CTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGA AACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGAGATCTGACATCTAA TGTTTCCGACAATGGCATTGGTGAGCTACATACAAAGCGCGTTGCAAGACAACTTGCTTC GGCGATCGATTATATTCATCAAAAAGATCTAATTCATAGAGATATTAAACTAGACAATGT GTTAGTGTTTCGCTCAGACTTTGCACGTATTAAACTATGTGATTTTGGCGAATCTAGAAA GCTAGGTGAGGAGGTTCTGAGACGTAATGAATGGCTTCCATACAGCCCTCCAGAAGTTTT GCTGGTAAAAACGGATGATAAATACAAGACTGATACAGCTCATGATGTGTGGCAGTTTGG CATAGTTTGTTTTGTATGTCT



consensusID : consensus_7790#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence
                              [CCGGTTTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATTACGGAAGAATTCAAACTATGGTAGCAAATGCTTTACCTTCATGTTCGTGTCTATGAACTAGACATCAAACGCGAATAAAATGGCTTCATCCAAGAAATCTGCAGGAAGCATCCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATCGCGCAACTGACACCGAGATGGTCCTGAAGCTTCTACCAAAACCGCTCGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGTAATACCCTGCGGAGATTCAAAATGGAAAACTTTTATTTCACTCTTGGAAGCTGCTGAATTATTTTGCAAGAGATCTGACATCTAATGTTTCCGACAATGGCATTGAGAT]

[+] EMBL BM605974             [CCGGTTTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATTACGGAAGAATTCAAACTATGGTAGCAAATGCTTTACCTTCATGTTCGTGTCTATGAACTAGACATCAAACGCGAATAAAATGGCTTCATCCAAGAAATCTGCAGGAAGCATCCACAAAATTCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATCGCGCAACTGACACCGAGATGGTCCTGAAGCTTCTACCAAAACCGCTCGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTCTTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTGGATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGTAATACCCTGCGGAGATTCAAAATGGAAAACTTTTATTTCACTCTTGGAAGCTGCTGAATTATTTTGCAAGAGATCTGACATCTAATGTTTCCGACAATGGCATTGAGAT]


>consensus_7790#3 CCGGTTTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATTACGGAAGA ATTCAAACTATGGTAGCAAATGCTTTACCTTCATGTTCGTGTCTATGAACTAGACATCAA ACGCGAATAAAATGGCTTCATCCAAGAAATCTGCAGGAAGCATCCACAAAATTCGCGAGT TTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGTTGGTGAAG GGTGGTTTGGAAAAATATTACTCGTGGAACATCGCGCAACTGACACCGAGATGGTCCTGA AGCTTCTACCAAAACCGCTCGTTTCGCTTACCGATTTTTACAAGGAATTTCACTTCAGTC TTATGCTGGGGCAACATAAAAATATTGTCACCACTTATGATGTAGCTTTCGAAACAGCTG GATTTTTCGTATTTACCCAAGAGTACGCCCCATTAGGTAATACCCTGCGGAGATTCAAAA TGGAAAACTTTTATTTCACTCTTGGAAGCTGCTGAATTATTTTGCAAGAGATCTGACATC TAATGTTTCCGACAATGGCATTGAGAT



consensusID : consensus_7790#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 275
fasta sequence
                              [CCGCGTGTTAGTTCTATTCAATTACGGCAATGTTCAACCTAACATTGTAGTCACTTATCATCAGTAATTTTCCTAAACTTAAATGAAAAAGTAACAAATTAGCCTTTTATTTATAATCGATTGCATTACACCTATTGAATACGCAGCAACTACCTTCTTTTATTTATATGGTGTGACAATCGCCAAACCCAAGTTCTTTGCGATACAGGCCTGTGAAAATGACGTTGTGTAAAATTAAAGTGATATATAAATTTAGAATATCATCAGCTCGACAC]

[+] EMBL BM626975             [CCGCGTGTTAGTTCTATTCAATTACGGCAATGTTCAACCTAACATTGTAGTCACTTATCATCAGTAATTTTCCTAAACTTAAATGAAAAAGTAACAAATTAGCCTTTTATTTATAATCGATTGCATTACACCTATTGAATACGCAGCAACTACCTTCTTTTATTTATATGGTGTGACAATCGCCAAACCCAAGTTCTTTGCGATACAGGCCTGTGAAAATGACGTTGTGTAAAATTAAAGTGATATATAAATTTAGAATATCATCAGCTCGACAC]


>consensus_7790#4 CCGCGTGTTAGTTCTATTCAATTACGGCAATGTTCAACCTAACATTGTAGTCACTTATCA TCAGTAATTTTCCTAAACTTAAATGAAAAAGTAACAAATTAGCCTTTTATTTATAATCGA TTGCATTACACCTATTGAATACGCAGCAACTACCTTCTTTTATTTATATGGTGTGACAAT CGCCAAACCCAAGTTCTTTGCGATACAGGCCTGTGAAAATGACGTTGTGTAAAATTAAAG TGATATATAAATTTAGAATATCATCAGCTCGACAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7790#2      CCGCGCGATCTGACGTGTTAGTTCTATTCACTTACGGCAATGTTCAACCTAACATTGTAG 60
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      ------------------------------------------------------------
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      ------CCGCCCACGCGTCCGCCCACGCGTCCGTGATACAGCTCATGATGTGTGGCAGTT 54
                                                                                  

consensus_7790#2      TCACTTATCATCATTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATT 120
consensus_7790#3      --------CCGGTTTCACAACATATAAAATTTGGAAAATGAAGTAAAATCCACTGATATT 52
consensus_7790#1      ------------------------------------------------------------
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      TGGCATAGTTTGTTTTGTATGTCTAACAGGGTGTTTGCCTTGGCAAAAAGCATCCACAGA 114
                                                                                  

consensus_7790#2      ACGGAAGAATTCAAACTATGGTAGCATATGCTTTACCTTCATGTTCGTGTCTAAAAACTA 180
consensus_7790#3      ACGGAAGAATTCAAACTATGGTAGCAAATGCTTTACCTTCATGTTCGTGTCTATGAACTA 112
consensus_7790#1      ------------------------------------------------------------
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      CGATCCTCGATATAATCGCTACCAACAATGGCATCAAGCAACACTCACCTTTCCGA-TGA 173
                                                                                  

consensus_7790#2      AACATCAAACGCGAATAAAATGGCTACATCCAAGAAATCTGCAGGAAGCATCCACAAAAT 240
consensus_7790#3      GACATCAAACGCGAATAAAATGGCTTCATCCAAGAAATCTGCAGGAAGCATCCACAAAAT 172
consensus_7790#1      ----------------------GCAGAATCCCCCCGCGGT-TAAGAAGCATC-ACAAAAT 36
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      AACGATGTCCAAAACTGTTCAAGCTGCTCTCTGCTAGAGCATGTAAACTGTTTAAGAAGT 233
                                                                                  

consensus_7790#2      TCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGT 300
consensus_7790#3      TCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGT 232
consensus_7790#1      TCGCGAGTTTGAGCTTGACAAAGTGGTTTTGTCTGACGAATTTGACATCTTACAAATCGT 96
consensus_7790#4      ---------------CCGCGTGTTAGTTCTATTCAATTACGGCAATGTTCAACCTAACAT 45
consensus_7790#0      TTTTGGATCCTCGTTCGGATAGACG--TTTAAAGACTCTAAGCGATTTGCAAAAATTTAT 291
                                                 * *              *  *   *       *

consensus_7790#2      TGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACAT-CGTGCAACTGACACCGAGA 359
consensus_7790#3      TGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACAT-CGCGCAACTGACACCGAGA 291
consensus_7790#1      TGGTGAAGGGTGGTTTGGAAAAATATTACTCGTGGAACATACGTGCAACTGACACCGAGA 156
consensus_7790#4      TG-TAGTCACTTATCATCAGTAATTTTCCT----AAACTT------AAATGAAAAAGTAA 94
consensus_7790#0      CGATGATCGATGGCTAGCAA-AATCGGCTGAAAAGGAAAT------GGCTGAAAACGAGC 344
                       * *      *       *  ***            *  *         *** *  *   

consensus_7790#2      TGGT-CCTGAAGCTT-CTACCGAAACCGTTCGTTTCGCT-TACCGATTTT-TACAAGG-A 414
consensus_7790#3      TGGT-CCTGAAGCTT-CTACCAAAACCGCTCGTTTCGCT-TACCGATTTT-TACAAGG-A 346
consensus_7790#1      TGGTACCTGAAGCTTACTACCAAAACGTATCGTTTCGCGATACCGATTTT-TACAAGGGA 215
consensus_7790#4      CAAA---TTAGCCTTTTATTTATAATCGATTGCATTAC---ACCTATTGAATACGCAGCA 148
consensus_7790#0      CCGA---TGAATTGTGCCCTTCGATGTATTCTTTCCACAGTAGCGTCGAGGAAAAAAATA 401
                             * *    *        *     *       *   * *        *      *

consensus_7790#2      ATTTCACT-TCAGT-CTTATG-CTGGGGCAACATAAAAA-TATTGTCACCACT--TATGA 468
consensus_7790#3      ATTTCACT-TCAGT-CTTATG-CTGGGGCAACATAAAAA-TATTGTCACCACT--TATGA 400
consensus_7790#1      ATTTCACTATCAGTACTTATGACTGGGGCAACATAAAAAATATTGTANACACTA-TATGA 274
consensus_7790#4      ACTACCTT-CTTTTATTTATA--TGGTGTGACA-ATCGCCAAACCCAAGTTCTT-TGCGA 203
consensus_7790#0      AGCT-ACTAGGAACTCTGGCA--CAATGTGGCATCGAGACAACAGTTGATCGTGCTGCTA 458
                      *      *        *          *   **        *          *  *   *

consensus_7790#2      TGTAG-CTT-TCGAAACAGCTGGATTTT-TCGTAT-TTACCCAAGAGTACGCCCCATTAG 524
consensus_7790#3      TGTAG-CTT-TCGAAACAGCTGGATTTT-TCGTAT-TTACCCAAGAGTACGCCCCATTAG 456
consensus_7790#1      TGTAG-CTTATCGAAAAGACTAGGGATT-NTTACT-ACAGGTAATATTAAGCCCCAAAGG 331
consensus_7790#4      TACAGGCCTGTGAAAATGAC--GTTGTG-TAAAAT-TAAAGTGATATATAAATTTAGAAT 259
consensus_7790#0      AGAAAAATCGTATACGAGATTGGATTCAATCGTCTGTCATCGTAGAGGAAGAGGAAGAGG 518
                         *      *  *        *           *   *    * *         *    

consensus_7790#2      GAGATCTGACATCTAATGTTTCCGACAATGGCATTGGTGAGCTACATACAAAGCGCGTTG 584
consensus_7790#3      GTAA--TACCCTGCGGAGATTC--AAAATGGAAAACTTTTATTTCACTCTTGG-AAGCTG 511
consensus_7790#1      AAGTAACGACCCCCATATACGTAAATAACCCCCTCANGGGAGGATNTCCACAA--AATTG 389
consensus_7790#4      ATCATCAGCTCGACAC-------------------------------------------- 275
consensus_7790#0      ATGATTCAGGATCAGCCACTCCTTCATCCACCGTTTCTAGAACTGCTGTTCCTGGACATG 578
                                                                                  

consensus_7790#2      CAAGACAACTTGCTTCGGCG--ATCGATTATATTCATCAAAAAGATCTAATTCATAGAGA 642
consensus_7790#3      CTGAATTATTT-TGCAAGAG--ATC--TGACATCTAATGTTTCCGACAATGGCATTGAGA 566
consensus_7790#1      GGAAGAGACCTCTTCTAATTTCNACAACNCTACTCTGGGGCACAGGTTTCTGCCTGGNGA 449
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      TTTCATCGGTGGCCGCTATGGAACGAGCGGAGAAAAAAATTAACACAACAGTAAAGGAGG 638
                                                                                  

consensus_7790#2      TATTAAACTAGACAATGTGTTAGTGTTTCGCTCAGACTTTGCACGTATTAAACTATGTGA 702
consensus_7790#3      T----------------------------------------------------------- 567
consensus_7790#1      NATAACTTTCANGGCACAGAGAAGGAATNCATTGGANACCNATTCCTTAAAANTAGGTTA 509
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      CATCACAAAAACACATCGATCCACGTACCGGCACCGTTCAAGTCGGCCCCAGTTAGATGG 698
                                                                                  

consensus_7790#2      TTTTGGCGAATCTAGAAAGCTAGGTGAGGAGGTTCTGAGACG-TAATGAATGGCTTCCAT 761
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      TATATACACCGGCACCACACATNGGGGCCACTTTCTGGGAAGGCATTCCGTAANAGTNAT 569
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      GATCTATTAATGCTCATAAAAATAACAATAATCGGTCTCCAC-CAAACATTAACGGACAC 757
                                                                                  

consensus_7790#2      ACAGCCCTCCAGAAGTTTTGCTGGTAAAAACGGATGATAAATACAAGACTGATACAGCTC 821
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      ACAATAAACGACGGAATCAACTTNTTCACTCAGCNTTCAACAAACNAAAACNAGGCTCAG 629
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      ACGATATTGTCAAACTCTAGCAAACCTAATCTCCTCTTAGCTACGCATGGCCTCGTAAAG 817
                                                                                  

consensus_7790#2      ATGATGTGTGGCAGTTTGGCATAGTTTGTTTT---GTATGTCT----------------- 861
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      GTANTAAGTAGGGTGAATNCCNGGGTTACCAG---GCANACTANACTGGCCACGGGTTAA 686
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      GTGGCATTTAGTTCGGTTGCATCAGTTCCGTTACCGCAAATCAATCGTAGCGATTTAGCC 877
                                                                                  

consensus_7790#2      ------------------------------------------------------------
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      ATTNTAAANGAAACCACTCAACTCGGCTNGGACACANCAACAGACGGGGGGCGGAAAAAC 746
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      AATAAAAAGATCAATATGGAGGACAGTGGCTACGGTAGTATAAACGGTACCCATAAGAAT 937
                                                                                  

consensus_7790#2      ------------------------------------------------------------
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      GNATCGCTGTANGGCAAAGACCAAAGCGCC---ACACAACANGGACATAGGACGCCGGCA 803
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      AGATCATATTCCAATAAAATTTCAAAATCGCCGACACTACCTAAACGATCTACTTTCATA 997
                                                                                  

consensus_7790#2      ------------------------------------------------------------
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      AGGCGGGANATTACCACNCGGCACAGGACACCCGCGCTACAAACACAGGGCAACAACCAT 863
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      CGATCTGAAAATAATCCTTCGGAAGATATGGAATCATCAGAAGAACGCGACAGTCAAAGC 1057
                                                                                  

consensus_7790#2      ------------------------------------------------------------
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      GGCGGACCCAACTACCCCCACNAAACCCACGCACACCCCCCNNTCGCCGCCACACGCACC 923
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      TTAGAGTTTGACGAGCTAGAAACAGATCGCGGATCGGATGGTTTTGTTAATGCATTGCAT 1117
                                                                                  

consensus_7790#2      ------------------------------------------------------------
consensus_7790#3      ------------------------------------------------------------
consensus_7790#1      GCGCCATCACNACTGGCCATAGGCCGCNTACACGCACGNCAACAACC------------- 970
consensus_7790#4      ------------------------------------------------------------
consensus_7790#0      GAAAAACGAAAGTCAGAGAAAAGGCAAGAGAGCACCTATGATAAGCTCTTCTTTCGAAGA 1177
                                                                                  

consensus_7790#2      -----------------------------
consensus_7790#3      -----------------------------
consensus_7790#1      -----------------------------
consensus_7790#4      -----------------------------
consensus_7790#0      AATAGTTGCAACTCGTCTGTACATTTTCT 1206
                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)