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Anopheles gambiae
cluster # 7791 cluster # 7791       Sequences # 8       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7791#0 length = 1011 sequences # 2  
consensus_7791#1 length = 986 sequences # 1  
consensus_7791#2 length = 711 sequences # 2  
consensus_7791#3 length = 709 sequences # 1  
consensus_7791#4 length = 674 sequences # 1  
consensus_7791#5 length = 330 sequences # 1  

consensusID : consensus_7791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1011
fasta sequence
                              [CCGGTTCAATAGAAATGCGATGGAACGAGCGTGTGTCGTAACTAGCAGGGAACATGAACATCTTTTGTTCAAATTCACCACGCTACCACGGAGGCTTTGTGAAGAAGTGTGCATTGATTTGGCTTTAGAATATGAGCGTCAGAGTATCAACTGAGCAAAGGTGAAACTATGTGATAATGAGAATGGGTCAACTCGCTTATCTCGCATAAAGAGAATCAATGTAGCCATCACTGTCGACGAGACCCAACGAAAGAGAACCCAAGTGTAGAGTAGTGGCCTTGCGAAGATAACAGCACTAACGCCACCATTTCCGTCCATATGTTTCCGCAGGTGAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCGTTACGATATCGCGTTCACTTCCTGTCTGCGCCGAGCTAATCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGCAACTGTGGCGCCTAAACGAACGTCACTACGGTGCTCTGACCGGGTTTAACAAGCGCCAGATGGCCGACATCTACGGCGAAAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCACCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGAACAATCCTCGACTGCGGCACATTAGCGAGCAGGATTTCCCCACGACCGAAACACTCGAAACGACCATGGAGCGAGTCGTGCCGGAGTGGACGGACTCGATCATACCGGAGATCCGTGGTGGCAAGCGGGTACTGGTTGTGGCCCATGGTACCAGTCTGCGCGGTTTGGTGAAGCATATTCAAGACGCGGACATCATGAAGTTCAACCTACCGAACAGTATTCCGTTCATAATAGATTTCGACGAGTCGATGAAGATGGTGGGCGGCATCCGGTTCCTGGCGAACGACGACACCGTGCTGAAGGCCATGGAGAAGGTGGCCTCGATCGGTGGAAAGTAGTAACAGAAGGACTAAGCTTAAAAGTTT]

[+] EMBL BM654163             [CCGGTTCAATAGAAATGCGATGGAACGAGCGTGTGTCGTAACTAGCAGGGAACATGAACATCTTTTGTTCAAATTCACCACGCTACCACGGAGGCTTTGTGAAGAAGTGTGCATTGATTTGGCTTTAGAATATGAGCGTCAGAGTATCAACTGAGCAAAGGTGAAACTATGTGATAATGAGAATGGGTCAACTCGCTTATCTCGCATAAAGAGAATCAATGTAGCCATCACTGTCGACGAGACCCAACGAAAGAGAACCCAAGTGTAGAGTAGTGGCCTTGCGAAGATAACAGCACTAACGCCACCATTTCCGTCCATATGTTTCCGCAGGTGAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCGTTACGATATCGCGTTCACTTCCTGTCTGCGCCGAGCTAATCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGCAACTGTGGCGCCTAAACGAACGTCACTACGGTGCTCTGACCGGGTTTAACAAGCGCCAGATGGCCGACATCTACGGCGAAAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCACCACCAGCCATCGAACCAAC                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM653289             [                                                                                                                                                                                                                                                                                                                                                                                                     ccgATCGCGTTCACTTCCTGTCTGCGCCGAGCTAACCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGCAGCTGTGGCGCCTAAACGAACGTCACTACGGTGCTCTGACCGGGTTTAACAAGCGCCAGATGGCCGACATCTACGGCG AAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCACCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGAACAATCCTCGACTGCGGCACATTAGCGAGCAGGATTTCCCCACGACCGAAACACTCGAAACGACCATGGAGCGAGTCGTGCCGGAGTGGACGGACTCGATCATACCGGAGATCCGTGGTGGCAAGCGGGTACTGGTTGTGGCCCATGGTACCAGTCTGCGCGGTTTGGTGAAGCATATTCAAGACGCGGACATCATGAAGTTCAACCTACCGAACAGTATTCCGTTCATAATAGATTTCGACGAGTCGATGAAGATGGTGGGCGGCATCCGGTTCCTGGCGAACGACGACACCGTGCTGAAGGCCATGGAGAAGGTGGCCTCGATCGGTGGAAAGTAGTAACAGAAGGACTAAGCTTAAAAGTTT]


>consensus_7791#0 CCGGTTCAATAGAAATGCGATGGAACGAGCGTGTGTCGTAACTAGCAGGGAACATGAACA TCTTTTGTTCAAATTCACCACGCTACCACGGAGGCTTTGTGAAGAAGTGTGCATTGATTT GGCTTTAGAATATGAGCGTCAGAGTATCAACTGAGCAAAGGTGAAACTATGTGATAATGA GAATGGGTCAACTCGCTTATCTCGCATAAAGAGAATCAATGTAGCCATCACTGTCGACGA GACCCAACGAAAGAGAACCCAAGTGTAGAGTAGTGGCCTTGCGAAGATAACAGCACTAAC GCCACCATTTCCGTCCATATGTTTCCGCAGGTGAATGGGACGCGTTGGAAGTGTCGGCAG CAGCACTGAAGCGGGAAAACATGCGTTACGATATCGCGTTCACTTCCTGTCTGCGCCGAG CTAATCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGC AACTGTGGCGCCTAAACGAACGTCACTACGGTGCTCTGACCGGGTTTAACAAGCGCCAGA TGGCCGACATCTACGGCGAAAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCA CCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGAACAATCCTCGACTG CGGCACATTAGCGAGCAGGATTTCCCCACGACCGAAACACTCGAAACGACCATGGAGCGA GTCGTGCCGGAGTGGACGGACTCGATCATACCGGAGATCCGTGGTGGCAAGCGGGTACTG GTTGTGGCCCATGGTACCAGTCTGCGCGGTTTGGTGAAGCATATTCAAGACGCGGACATC ATGAAGTTCAACCTACCGAACAGTATTCCGTTCATAATAGATTTCGACGAGTCGATGAAG ATGGTGGGCGGCATCCGGTTCCTGGCGAACGACGACACCGTGCTGAAGGCCATGGAGAAG GTGGCCTCGATCGGTGGAAAGTAGTAACAGAAGGACTAAGCTTAAAAGTTT



consensusID : consensus_7791#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 986
fasta sequence
                              [TCAGCAGATGGCCCCGGGTTAAGCTTACAAGTTTCCCCGATATCCCAAGCGTGTACACACACCCCGCACTGCTCCGATACGTCGGTGCTACTCTACCTCATACCCAGAAACCTATATGTCTTAGTAGATGCAATAGGTNTTCTATTTGCTTCTACTTTGGAGGGTATTTGCTAGCGAGCAGTGTTAGATAAAACCCTACTCGTAATAGTACATGTAGCTATTCCTCTCATAATTTATTGAACTANTTAATACTGTCCACTTAGAAAACCCAGGNGTNTCTGAGCCGGATATATTCTAAACATAATTAAATAACGGGCATTAACTGTTCATTTGTANCACNCAACAACATGAATTCTAGCAATGTGTAAGGGATTGCTTCTTTACTGCAATGGGGCCATTGTTTATGCACGGATGTACGAAACTCCATAACCCACCCAAAGGAACACNTTAATTCGACCAGGCGGAACCCCCCAAGTTTCGGGCAANCTAGGAACGCAAGGTTGGAAGCAACAGNCCGAAACCCTCCGAATTAAGACTTGGGAAATCACNCGTGACAAACACAAAACACCCTTGTTACGAGNGAGAGAATTCAAGATTGTTGTANCAGTTCGGAAATGGGTAAGNGCCTAGCAAGCCCTCAGGGCAACCTGAAGCCATTCCCTTGGGACGACAATAACTTGCTTAAAACCCCGGAGGGCCCAATTGCACAACCAACAAGCAGAAACGGTTTGGCCTACCTACATATCTAGGNCNGNAAGNCCACACCGGAAACGACAAGTGTGGNGCAAGAACGAAGCGGAAANCGACTTATTCCCCCGGGCCGGGTCCGAAACTTANTATGGGCCCTTANTCNCTGGAAANACTAACTAGTANTATCACNCTATAGGTAGTTAGTANGAAGGGATCAGGNNCAGAANCGCCTTCAACATTTTCGGGCAACAAGTGCCACTNAANCATTTNTTACNCATGCAATCTANATTAGGTAN]

[+] EMBL AL929867             [TCAGCAGATGGCCCCGGGTTAAGCTTACAAGTTTCCCCGATATCCCAAGCGTGTACACACACCCCGCACTGCTCCGATACGTCGGTGCTACTCTACCTCATACCCAGAAACCTATATGTCTTAGTAGATGCAATAGGTNTTCTATTTGCTTCTACTTTGGAGGGTATTTGCTAGCGAGCAGTGTTAGATAAAACCCTACTCGTAATAGTACATGTAGCTATTCCTCTCATAATTTATTGAACTANTTAATACTGTCCACTTAGAAAACCCAGGNGTNTCTGAGCCGGATATATTCTAAACATAATTAAATAACGGGCATTAACTGTTCATTTGTANCACNCAACAACATGAATTCTAGCAATGTGTAAGGGATTGCTTCTTTACTGCAATGGGGCCATTGTTTATGCACGGATGTACGAAACTCCATAACCCACCCAAAGGAACACNTTAATTCGACCAGGCGGAACCCCCCAAGTTTCGGGCAANCTAGGAACGCAAGGTTGGAAGCAACAGNCCGAAACCCTCCGAATTAAGACTTGGGAAATCACNCGTGACAAACACAAAACACCCTTGTTACGAGNGAGAGAATTCAAGATTGTTGTANCAGTTCGGAAATGGGTAAGNGCCTAGCAAGCCCTCAGGGCAACCTGAAGCCATTCCCTTGGGACGACAATAACTTGCTTAAAACCCCGGAGGGCCCAATTGCACAACCAACAAGCAGAAACGGTTTGGCCTACCTACATATCTAGGNCNGNAAGNCCACACCGGAAACGACAAGTGTGGNGCAAGAACGAAGCGGAAANCGACTTATTCCCCCGGGCCGGGTCCGAAACTTANTATGGGCCCTTANTCNCTGGAAANACTAACTAGTANTATCACNCTATAGGTAGTTAGTANGAAGGGATCAGGNNCAGAANCGCCTTCAACATTTTCGGGCAACAAGTGCCACTNAANCATTTNTTACNCATGCAATCTANATTAGGTAN]


>consensus_7791#1 TCAGCAGATGGCCCCGGGTTAAGCTTACAAGTTTCCCCGATATCCCAAGCGTGTACACAC ACCCCGCACTGCTCCGATACGTCGGTGCTACTCTACCTCATACCCAGAAACCTATATGTC TTAGTAGATGCAATAGGTNTTCTATTTGCTTCTACTTTGGAGGGTATTTGCTAGCGAGCA GTGTTAGATAAAACCCTACTCGTAATAGTACATGTAGCTATTCCTCTCATAATTTATTGA ACTANTTAATACTGTCCACTTAGAAAACCCAGGNGTNTCTGAGCCGGATATATTCTAAAC ATAATTAAATAACGGGCATTAACTGTTCATTTGTANCACNCAACAACATGAATTCTAGCA ATGTGTAAGGGATTGCTTCTTTACTGCAATGGGGCCATTGTTTATGCACGGATGTACGAA ACTCCATAACCCACCCAAAGGAACACNTTAATTCGACCAGGCGGAACCCCCCAAGTTTCG GGCAANCTAGGAACGCAAGGTTGGAAGCAACAGNCCGAAACCCTCCGAATTAAGACTTGG GAAATCACNCGTGACAAACACAAAACACCCTTGTTACGAGNGAGAGAATTCAAGATTGTT GTANCAGTTCGGAAATGGGTAAGNGCCTAGCAAGCCCTCAGGGCAACCTGAAGCCATTCC CTTGGGACGACAATAACTTGCTTAAAACCCCGGAGGGCCCAATTGCACAACCAACAAGCA GAAACGGTTTGGCCTACCTACATATCTAGGNCNGNAAGNCCACACCGGAAACGACAAGTG TGGNGCAAGAACGAAGCGGAAANCGACTTATTCCCCCGGGCCGGGTCCGAAACTTANTAT GGGCCCTTANTCNCTGGAAANACTAACTAGTANTATCACNCTATAGGTAGTTAGTANGAA GGGATCAGGNNCAGAANCGCCTTCAACATTTTCGGGCAACAAGTGCCACTNAANCATTTN TTACNCATGCAATCTANATTAGGTAN



consensusID : consensus_7791#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 711
fasta sequence
                              [CCGGCGCACGATCGGTTCTCATCGAATTCGAAGACACCGTCAGTTCGCTCGGAGCCCTTTTCAGCCACGACACGTGGTGGTGTGGCAAGTTGCTGCCAGTTTGTTAGAACGCTTGCTTGAAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGAGTTGGTTTAGTTTTTAACATTTTTTTGAGTTGTTTAGCAAAGTGTTTGTGTTTGAAGTGTACTTACATTGTTCCTTTCTCGTCTCTTTCTCTATTACCACAGTTAAGGGAACTATGCCCGAGGAGGGCTTTTAGGCATCATCATTCAGTCTTTGACTACGGGAACATACCAAGCACGGTTAACTAAAAAGCTGAACTGCTCAACTGCTGCAGCAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTCTCAACAGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCCAGTGAGGAAAGTGGAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCGTTACGATATCGCGTTCACTTCCTGTCTGCGCCGAGCTAATC]

[+] EMBL BM651799             [CCGGCGCACGATCGGTTCTCATCGAATTCGAAGACACCGTCAGTTCGCTCGGAGCCCTTTTCAGCCACGACACGTGGTGGTGTGGCAAGTTGCTGCCAGTTTGTTAGAACGCTTGCTTGAAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGAGTTGGTTTAGTTTTTAACATTTTTTTGAGTTGTTTAGCAAAGTGTTTGTGTTTGAAGTGTACTTACATTGTTCCTTTCTCGTCTCTTTCTCTATTACCACAGTTAAGGGAACTATGCCCGAGGAGGGCTTTTAGGCATCATCATTCAGTCTTTGACTACGGGAACATACCAAGCACGGTTAACTAAAAAGCTGAACTGCTCAACTGCTGCAGCAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTCTCAACAGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCCAGTGAGGAAAGTGGAATGGGACGCGTT                                                                                ]
[+] EMBL BM627649             [                                                                      ccgGTGGTGGTGTGGCAAGTTGCTGCCAGTTTGTTAGAACGCTTGCTTGAAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGAGTTGGTTTAGTTTTTAACATTTTTTTGAGTTGTTTAGCAAAGTGTTTGTGTTTGAAGTGTACTTACATTGTTCCTTTCTCGTCTCTTTCTCTATTACCACAGTTAAGGGAACTATGCCCGAGGAGGGCTTTTAGGCATCATCATTCAGTCTTTGACTACGGGAACATACCAAGCACGGTTAACTAAAAAGCTGAACTGCTCAACTGCTGCAGCAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTCTCAACAGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAAT GGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCT CAGTGAGGAAGGT GAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCGTTACGATATCGCGTTCACTTCCTGTCTGCGCCGAGCTAATC]


>consensus_7791#2 CCGGCGCACGATCGGTTCTCATCGAATTCGAAGACACCGTCAGTTCGCTCGGAGCCCTTT TCAGCCACGACACGTGGTGGTGTGGCAAGTTGCTGCCAGTTTGTTAGAACGCTTGCTTGA AGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGAGTTGGTTTAGTT TTTAACATTTTTTTGAGTTGTTTAGCAAAGTGTTTGTGTTTGAAGTGTACTTACATTGTT CCTTTCTCGTCTCTTTCTCTATTACCACAGTTAAGGGAACTATGCCCGAGGAGGGCTTTT AGGCATCATCATTCAGTCTTTGACTACGGGAACATACCAAGCACGGTTAACTAAAAAGCT GAACTGCTCAACTGCTGCAGCAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTC TCAACAGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTG AACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTC GTCACGGCGAAAGCGAATGGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGT CTCCAGTGAGGAAAGTGGAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGG AAAACATGCGTTACGATATCGCGTTCACTTCCTGTCTGCGCCGAGCTAATC



consensusID : consensus_7791#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 709
fasta sequence
                              [CCGAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGTTTAAGGGAACTATGCCCGAGGAGGGCTTTTAGGCATCATCATTCAGTCTTTGACTACGGGAACATACCAAGCACGGTTAACTAAAAAGCTGAACTGCTCAACTGCTGCAACAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTCTCAACAGCGGAAGTGACAAGTCAGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCAGTGAGGAAGGTGAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCGTTACGACATCGCGTTCACTTCCTGTCTGCGCCGAGCTAACCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGCAGCTGTGGCGCCTAAACGAACGTCACTACGGTCTCTGACCGGGTTTAACAAGCGCCAGATGGCCGACATCTACGGCGAAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCACCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGAAC]

[+] EMBL BM635636             [CCGAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGTTTAAGGGAACTATGCCCGAGGAGGGCTTTTAGGCATCATCATTCAGTCTTTGACTACGGGAACATACCAAGCACGGTTAACTAAAAAGCTGAACTGCTCAACTGCTGCAACAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTCTCAACAGCGGAAGTGACAAGTCAGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCAGTGAGGAAGGTGAATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCGTTACGACATCGCGTTCACTTCCTGTCTGCGCCGAGCTAACCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGCAGCTGTGGCGCCTAAACGAACGTCACTACGGTCTCTGACCGGGTTTAACAAGCGCCAGATGGCCGACATCTACGGCGAAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCACCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGAAC]


>consensus_7791#3 CCGAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTACTTTGTTTAAGGGAA CTATGCCCGAGGAGGGCTTTTAGGCATCATCATTCAGTCTTTGACTACGGGAACATACCA AGCACGGTTAACTAAAAAGCTGAACTGCTCAACTGCTGCAACAGCCTAGACGTCGCAGAA TAAACGGAAGCCAACAGCGTCTCAACAGCGGAAGTGACAAGTCAGCGTATTGTGCGTTGA GCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAG CGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCT GCGGTTGGCACGACGTCGGTCTCAGTGAGGAAGGTGAATGGGACGCGTTGGAAGTGTCGG CAGCAGCACTGAAGCGGGAAAACATGCGTTACGACATCGCGTTCACTTCCTGTCTGCGCC GAGCTAACCAAACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGA GGCAGCTGTGGCGCCTAAACGAACGTCACTACGGTCTCTGACCGGGTTTAACAAGCGCCA GATGGCCGACATCTACGGCGAAGAGCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCC ACCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGAAC



consensusID : consensus_7791#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [CCGGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCAGTGAGGAAGGTAAAGCCCTGTCCAAAGATATGATGATGTCGTTTTTATTTACAGTATTTTGCTAGTGCATTTTCAACCATCATGCGAACATGCACGAGGTATGTGTGGGTTTTGTCCACCACGTTTGTGTTGGGACGCAGTGTGGTCGATCTCGAAAGCGCGTTCTATTTTTAGGCGAAAGCCTACAGACGACATCATCAATGCATTTCGTTTGAGCTGGTTCTTGACCGACAGTAACAACAACAACAACAACCGGTTGATTGTCGAATTTTCGCTGCTCTGTTATTTTGATCATCATCCGCTTTGGCGGTCATTAACAGAGCAAAGTTCAGAGCCCGGATGTCCGAAAGCTTTTACGTGTCGTTACTATGCACACAGCGGAAGTGTGCAGCGTGTGTTTTGTTGACATTTGAGTGTGCCTAACCATAGGAGAACTAGATTGACATTGTACACATTTGTTATAGTTCAATAGAAATGCGATGGGAACGAGCGTG]

[+] EMBL BM652896             [CCGGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTCACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCAGTGAGGAAGGTAAAGCCCTGTCCAAAGATATGATGATGTCGTTTTTATTTACAGTATTTTGCTAGTGCATTTTCAACCATCATGCGAACATGCACGAGGTATGTGTGGGTTTTGTCCACCACGTTTGTGTTGGGACGCAGTGTGGTCGATCTCGAAAGCGCGTTCTATTTTTAGGCGAAAGCCTACAGACGACATCATCAATGCATTTCGTTTGAGCTGGTTCTTGACCGACAGTAACAACAACAACAACAACCGGTTGATTGTCGAATTTTCGCTGCTCTGTTATTTTGATCATCATCCGCTTTGGCGGTCATTAACAGAGCAAAGTTCAGAGCCCGGATGTCCGAAAGCTTTTACGTGTCGTTACTATGCACACAGCGGAAGTGTGCAGCGTGTGTTTTGTTGACATTTGAGTGTGCCTAACCATAGGAGAACTAGATTGACATTGTACACATTTGTTATAGTTCAATAGAAATGCGATGGGAACGAGCGTG]


>consensus_7791#4 CCGGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGTGCACCTGAAC GTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGTGTTACCTTCGTTCGTC ACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCA GTGAGGAAGGTAAAGCCCTGTCCAAAGATATGATGATGTCGTTTTTATTTACAGTATTTT GCTAGTGCATTTTCAACCATCATGCGAACATGCACGAGGTATGTGTGGGTTTTGTCCACC ACGTTTGTGTTGGGACGCAGTGTGGTCGATCTCGAAAGCGCGTTCTATTTTTAGGCGAAA GCCTACAGACGACATCATCAATGCATTTCGTTTGAGCTGGTTCTTGACCGACAGTAACAA CAACAACAACAACCGGTTGATTGTCGAATTTTCGCTGCTCTGTTATTTTGATCATCATCC GCTTTGGCGGTCATTAACAGAGCAAAGTTCAGAGCCCGGATGTCCGAAAGCTTTTACGTG TCGTTACTATGCACACAGCGGAAGTGTGCAGCGTGTGTTTTGTTGACATTTGAGTGTGCC TAACCATAGGAGAACTAGATTGACATTGTACACATTTGTTATAGTTCAATAGAAATGCGA TGGGAACGAGCGTG



consensusID : consensus_7791#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 330
fasta sequence
                              [AGAATCGCCACGAGGACGCGGACATCATGAAGTTCAACCTACCGAACAGTATTCCGTTCATAATAGATTTCGACGAGTCGATGAAGATGGTGGGCGGCATCCGGTTCCTGGCGAACGACGACACCGTGCTGAAGGCCATGGAGAAGGTGGCCTCGATCGGTGGAAAGTAGCAACAAAAGGACTAAGCTTAAAAGTTTCCCCGATATCCCAAGCGTGTAACACACACCCCGCACTGCTCCGATACGTCCGGTGCTACTCTACCTCATACCCAGAAACCTTTGTCTTAGTAGATGCAATGGTTTCTTTTGCTTCTCTTTGGAGGGTTTTGCT]

[+] EMBL AL932557             [AGAATCGCCACGAGGACGCGGACATCATGAAGTTCAACCTACCGAACAGTATTCCGTTCATAATAGATTTCGACGAGTCGATGAAGATGGTGGGCGGCATCCGGTTCCTGGCGAACGACGACACCGTGCTGAAGGCCATGGAGAAGGTGGCCTCGATCGGTGGAAAGTAGCAACAAAAGGACTAAGCTTAAAAGTTTCCCCGATATCCCAAGCGTGTAACACACACCCCGCACTGCTCCGATACGTCCGGTGCTACTCTACCTCATACCCAGAAACCTTTGTCTTAGTAGATGCAATGGTTTCTTTTGCTTCTCTTTGGAGGGTTTTGCT]


>consensus_7791#5 AGAATCGCCACGAGGACGCGGACATCATGAAGTTCAACCTACCGAACAGTATTCCGTTCA TAATAGATTTCGACGAGTCGATGAAGATGGTGGGCGGCATCCGGTTCCTGGCGAACGACG ACACCGTGCTGAAGGCCATGGAGAAGGTGGCCTCGATCGGTGGAAAGTAGCAACAAAAGG ACTAAGCTTAAAAGTTTCCCCGATATCCCAAGCGTGTAACACACACCCCGCACTGCTCCG ATACGTCCGGTGCTACTCTACCTCATACCCAGAAACCTTTGTCTTAGTAGATGCAATGGT TTCTTTTGCTTCTCTTTGGAGGGTTTTGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7791#2      ------------------------------------------------------------
consensus_7791#3      ------------------------------------------------------------
consensus_7791#4      ------------------------------------------------------------
consensus_7791#1      -TCAGCAGATGGCCCCGGGTTAAGCTTACAAGTTTCCCCGATATCCCAAGCGTGTACACA 59
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      CCGGTTCAATAGAAATGCGATGGAACGAGCGTGTGTCGTAACTAGCAGGGAACATGAACA 60
                                                                                  

consensus_7791#2      ------------------------------------------------------------
consensus_7791#3      ------------------------------------------------------------
consensus_7791#4      ------------------------------------------------------------
consensus_7791#1      CACCCCGCACTGCTCCGATACGTCGGTGCTACTCTACCTCATACCCAGAAACCTATATGT 119
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      TCTTTTGTTCAAATTCACCACGCTACCACGGAG--GCTTTGTGAAGAAGTGTGCATTGAT 118
                                                                                  

consensus_7791#2      ------------------------------------CCGGCGCACGATCGGTTCTCATCG 24
consensus_7791#3      ------------------------------------------------------------
consensus_7791#4      ------------------------------------------------------------
consensus_7791#1      CTTAGTAGATGCAATAGGTNTTCTATTTGCTTCTACTTTGGAGGGTATTTGCTAGCGAGC 179
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      TTGGCTTTAGAATATGAGCGTCAGAGTATCAACTGAGCAAAGGTGAAACTATGTGATAAT 178
                                                                                  

consensus_7791#2      AATTCGAAGACACCGTCAGTTCGCTCGGAGCCCTTTTCAGCCACGACACGTGGTGGTGTG 84
consensus_7791#3      ------------------------------------------------------------
consensus_7791#4      ------------------------------------------------------------
consensus_7791#1      AGTGTTAGATAAAACC--CTACTCGTAATAGTACATGTAGCTATTCCTCTCATAATTTAT 237
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      GAGAATGGGTCAACTCGCTTATCTCGCATAAAGAGAATCAATGTAGCCATCACTGTCGAC 238
                                                                                  

consensus_7791#2      GCAAGTTGCTGCCAGTTTGTTAGAACGCTTGCTTGAAGGAACATTACCGTTTAAGTATTC 144
consensus_7791#3      ------------------------------------------------------------
consensus_7791#4      ----------CCGGCGGAAGTGACAAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTGT 50
consensus_7791#1      TGAACT--ANTTAATACTGTCCACTTAGAAAACCCAGGNGTNTCTGAGCCGGATATATTC 295
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      GAGACCCAACGAAAGAGAACCCAAGTGTAGAGTAGTGGCCTTGCGAAGATAACAGCACTA 298
                                                                                  

consensus_7791#2      TTGCCGTGATCGTGTGTACTTTGAGTTGGTTTAGTTTTTAACATTTTTTTGAGTTGTTTA 204
consensus_7791#3      ------------------------------------------------------------
consensus_7791#4      GCACCTGAACGTTGCATTCCACGAAATTGCACGATGCATAAAGCAGCGTACAGT-GTTAC 109
consensus_7791#1      TAAACATAATTAAATAACGGGCATTAACTGTTCATTTGTANCACNCAACAACATGAATTC 355
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      ACGCCACCATTTCCGTCCATATGTTT-CCGCAGGTGAATGGGACGCGTTGGAAGTGTCGG 357
                                                                                  

consensus_7791#2      GCAAAGTGTTTGTGTTTGAAGTGTACTTACATTGTTCCTTTCTCGTCTCTTTCTCTATTA 264
consensus_7791#3      ---------------CCGAGGAACATTACCGTTTAAGTATTCTTGCCGTGATCGTGTGTA 45
consensus_7791#4      CTTCGTTCGTCACGGCGAAAGCGAATGGAATAAGATGAACCTCTTCTGCGGTTGGCACGA 169
consensus_7791#1      TAGCAATGTGTA-AGGGATTGCTTCTTTACTGCAATGGGGCCATTGTTTATGCACGGATG 414
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      CAGCAGCACTGA-AGCGGGAAAACATGCGTTACGATATCGCGTTCACTT---CCTGTCTG 413
                                                                                  

consensus_7791#2      CCACAGTTAAGGGAACTATGCCCGAGGAGGGCTTTTA---GGCATCATCATTCAGTCTTT 321
consensus_7791#3      CTTTGTTTAAGGGAACTATGCCCGAGGAGGGCTTTTA---GGCATCATCATTCAGTCTTT 102
consensus_7791#4      CGTCGGTCTCAGTGAGGAAGGTAAAGCCCTGTCCAAA---GATATGATGATGTCGTTTTT 226
consensus_7791#1      TACGAAACTCCATAACCCACCCAAAGGAACACNTTAATTCGACCAGGCGGAACCCCCCAA 474
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      CGCCGAGCTAATCAA---ACTCTGGACATTATTCTAAAGGAGCTCAATCTCACCGACATT 470
                                                                                  

consensus_7791#2      GACTACGGGAACATACCAA-GCACGGTTAAC--TAAAAAGCTGAACTGCTCAACTGCTGC 378
consensus_7791#3      GACTACGGGAACATACCAA-GCACGGTTAAC--TAAAAAGCTGAACTGCTCAACTGCTGC 159
consensus_7791#4      ATTTACAGTATTTTGCTAGTGCATTTTCAAC--CATCATGCGAACATGCACGAGGTATGT 284
consensus_7791#1      GTTTCGGGCAANCTAGGAACGCAAGGTTGGAAGCAACAGNCCGAAACCCTCCGAATTAAG 534
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      CCTGTGAGGCAACTGTGGCGCCTAAACGAACGTCACTACGGTGCTCTGACCGGGTTTAAC 530
                                                                                  

consensus_7791#2      AGCAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTC-TCAACAGCGGAAGTGAC 437
consensus_7791#3      AACAGCCTAGACGTCGCAGAATAAACGGAAGCCAACAGCGTC-TCAACAGCGGAAGTGAC 218
consensus_7791#4      GTGGGTTTTGTC--CACCACGTTTGTGTTGGGACGCAGTGTGGTCGATCTCGAAAGCG-- 340
consensus_7791#1      ACTTGGGAAATCA-CNCGTGACAAACACAAAACACCCTTGTT-ACGAGNGAGAGAATTCA 592
consensus_7791#5      ------AGAATCG-CC-ACGA-GGACGCGGACATCATGAAGT-TCAACCTACCGAA--CA 48
consensus_7791#0      AAGCGCCAGATGG-CCGACATCTACGGCGAAAGAGC--AGGT-ACAGGTGTGGCGGCGCA 586
                                    *                             *               

consensus_7791#2      AAGTCTGCGTATTGTGCGTTGAGCGGGGAAAAGTG-TGCACCTGAACGTTGCATTCCACG 496
consensus_7791#3      AAGTCAGCGTATTGTGCGTTGAGCGGGGAAAAGTG-TGCACCTGAACGTTGCATTCCACG 277
consensus_7791#4      -CGTTCTATTTTTAGGCGA-AAGCCTACAGACGAC-ATCATCAATGCATTTCGTTTGAGC 397
consensus_7791#1      AGATTGTTGTANCAGTTCGGAAATGGGTAAGNGCCTAGCAAGCCCTCAGGGCAACCTGAA 652
consensus_7791#5      GTATTCCGTTCATAAT----AGATTTCGACGAGTCGATGAAG-----ATGGTGGGCGGCA 99
consensus_7791#0      GCTTCAACGTCCCACCACCAGCCATCGAACCAACCAACCCGTATTATCACGCGATCAAGA 646
                         *     *                  *                               

consensus_7791#2      A-AATTGCACGATGCATAA-AGCAGCGTACAGTGTTACCT--TCGTTCGTCACGGCGAAA 552
consensus_7791#3      A-AATTGCACGATGCATAA-AGCAGCGTACAGTGTTACCT--TCGTTCGTCACGGCGAAA 333
consensus_7791#4      T-GGTT-CTTGACCGACAGTAACAACA-ACAACAACAACCGGTTGATTGTCGAATTTTCG 454
consensus_7791#1      GCCATTCCCTTG-GGACGACAATAACTTGCTTAAAACCCCG-GAGGGCCCAATTGCACAA 710
consensus_7791#5      TCCGGTTCCTGGCGAACGACGACACCGTGCTGAAGGCCATG-GAGAAGGTGGC--CTCGA 156
consensus_7791#0      ACAATCCTCGACTGCGGCACATTAGCGAGCAGGATTTCCCC-ACGACCGAAACACTCGAA 705
                                             * *   *              *               

consensus_7791#2      GCGAA-TGGGAATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTCCAGTGAGG 611
consensus_7791#3      GCGAA-TGG-AATAAGATGAACCTCTTCTGCGGTTGGCACGACGTCGGTCTC-AGTGAGG 390
consensus_7791#4      CTGCTCTGTTATTTTGATCATCATCCGCTTTGGCGGTCATTA--ACAGAGCAAAGTTCAG 512
consensus_7791#1      CCAACAAGCAGAAACGGTTTGGCCTACCTACATATCTAGGNCNGNAAGNCCACACCGGAA 770
consensus_7791#5      TCGGTGGAAAGTAGCAA----------CAAAAGGACTAAGCTTAAAAGTTTCCCC--GAT 204
consensus_7791#0      ACGACCAT--GGAGCGAGT-------CGTGCCGGAGTGGACGGACTCGATCATACCGGAG 756
                                                                     *            

consensus_7791#2      AAAGTGGA-ATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCG 670
consensus_7791#3      AAGGTG-A-ATGGGACGCGTTGGAAGTGTCGGCAGCAGCACTGAAGCGGGAAAACATGCG 448
consensus_7791#4      AGCCCGGATGTCCGAAAGCTTTTACGTGTCGTTACTATGCACACAGCGG--AAGTGTGCA 570
consensus_7791#1      ACGACAAGTGTGGNGCAAGAACGAAGCGGAAANCGACTTATTCCCCCGG---GCCGGGTC 827
consensus_7791#5      ATCCCAAGCGTGTAACACACACC---CCGCACTGCTCCGATACGTCCGG---TGCTACTC 258
consensus_7791#0      ATCCGTGGTGGCAAGCGGGTACTGGTTGTGGCCCATGGTACCAGTCTGC---GCGGTTTG 813
                      *                                              *            

consensus_7791#2      TTACGATATCGCGTTCACTTCCTGTCTGCGCCGAGCTAATC------------------- 711
consensus_7791#3      TTACGACATCGCGTTCACTTCCTGTCTGCGCCGAGCTAACCAAACTCTGGA----CATTA 504
consensus_7791#4      GCGTG-TGTTTTGTTGACATT-TGAGTGTGCCTAACCATAGGAGAACTAGATTGACATTG 628
consensus_7791#1      -CGAAACTTANTATGGGCCCTTANTCNCTGGAAAN-AC--TAACTAGTANT---ATCACN 880
consensus_7791#5      -TACCTCATACCCAGAAACCTTTGTCTTAGTAGAT-GCAATGGTTTCTTTT---GCTTCT 313
consensus_7791#0      GTGAAGCATATTCAAGACGCGGACATCATGAAGTTCAACCTACCGAACAGT---ATTCCG 870
                              *                    *                              

consensus_7791#2      ------------------------------------------------------------
consensus_7791#3      TTCTAAAGGAGCTCAATCTCACCGACATTCCTGTGAGGCAGCTGTGGCGCCTAAACGAAC 564
consensus_7791#4      TACACATTTGTTATAGTTCAATAGAAATGCGATGGGAACGAGCGTG-------------- 674
consensus_7791#1      CT-ATAGGTAGTTAGTANGAAGGGATCAGGNNCAGAANCGCCTTCAACATTTTCGGGCAA 939
consensus_7791#5      CT-TTGGAGGGTTTTGCT------------------------------------------ 330
consensus_7791#0      TTCATAATAGATTTCGACGAGTCGATGAAGATGGTGGGCGGCATCCGGTTCCTGGCGAAC 930
                                                                                  

consensus_7791#2      ------------------------------------------------------------
consensus_7791#3      GTCACTACGGTCTCTGACCGGGTTTAACAAGCGCCAGATGGCCGACATCTACGGCGAAGA 624
consensus_7791#4      ------------------------------------------------------------
consensus_7791#1      CAAG-TGCCACTNAANCATTTNTTACNCATGCAATCTANATTAGGTAN------------ 986
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      GACGACACCGTGCTGAAGGCCATGGAGAAGGTGGCCTCGATCGGTGGAAAGTAGTAACAG 990
                                                                                  

consensus_7791#2      ------------------------------------------------------------
consensus_7791#3      GCAGGTACAGGTGTGGCGGCGCAGCTTCAACGTCCCACCACCAGCCATCGAACCAACCAA 684
consensus_7791#4      ------------------------------------------------------------
consensus_7791#1      ------------------------------------------------------------
consensus_7791#5      ------------------------------------------------------------
consensus_7791#0      AAGGACTAAGCTTAAAAGTTT--------------------------------------- 1011
                                                                                  

consensus_7791#2      -------------------------
consensus_7791#3      CCCGTATTATCACGCGATCAAGAAC 709
consensus_7791#4      -------------------------
consensus_7791#1      -------------------------
consensus_7791#5      -------------------------
consensus_7791#0      -------------------------
                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)