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Anopheles gambiae
cluster # 7813 cluster # 7813       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7813#0 length = 1023 sequences # 3  
consensus_7813#1 length = 907 sequences # 3  
consensus_7813#2 length = 782 sequences # 1  
consensus_7813#3 length = 544 sequences # 1  

consensusID : consensus_7813#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1023
fasta sequence
                              [GGCCAAGAATCGGCACGTAGGCCGAATGGTCCGTAGTGCACGATATACAGGAGCTA-CGCACGATGAGGAATCCGATGAAGACGAGGAGGAGCTAGCAGAACGAGAGCAGAATCGTCGGGAAGAGGATAATGATCAGGCAGAGGAGTCGTCTAACAGCGGTGTCAATGTGGCCCGCGATCCACAACCGGGCACGAGCGGGATGTCCGGCCGATCGGCTAGAGGCAGCGAATTGGGAGGCATGTTCCGGCTGAATGTAACAATGCGAGAAATGATGTCGTCCGTGGAATCGCACAGAGAGCCCACTGTTGGTAGTAATGAGGCCAATGCTAACGCGGAAGGTAACGTTGATCCACAACCGTCCGGAAGTCGCAGCAATTTGGTAACTTCGAGATCATCACCACCGCACGAAGCGCAGCATGTTGAAGCAGGCCCAA-GCGGACAGCAACCACCTGCAGCAAACGTACGTCGACAGAATGGTCGCGGCAGACGCGTTATGATTACAAGACGAAACCTGCGCTCTGAAAATGCTAGCACCGACGTTTGGGCCACAGAGGTAACGTTCCGGGAGCGTAAGAACATGCCGAGCCCACANGTACGCAACAATCGCGGCCAAATCTACGGCATTGTATCGGGTGTTAGCTCGTCCGCTAGCACCGGTTACACCGGTGCGGGTAGGAAGCGAGCAAACGAAAAGATTTGT-AAAATGTACCCCGTATGCTTTATTACATACAAGAAACGATCACAGATCAGGGATTCATCAGAGAGTCCTGCTTTTCCCCCGACGGTCGTATTATCTGCTCGCCGCACGACCACGGTTTTCGTCTGCTGGCGTTTAACGAGAATTGTAACGAGCTGCAACATGCGACGGGCATTTGGCGGAACGAGAAGGCACAGCAGTTGCATGAGGTTAAGCGCAAGCAGTGTCACTCGTCCCTGGTTGTGAGCAGTCAGTTTAGCCCACGGTTTCCTTTGCTTGTAACGGGTTGCCTGCTGGGCAAAATTGTCTGGCATCAACCGGCACTG]

[+] EMBL BX468504             [GGCCAAGAATCGGCACGTAGGCCGAATGGTCCGTAGTGCACGATATACAGGAGCTA CGCACGATGAGGAATCCGATGAAGACGAGGAGGAGCTAGCAGAACGAGAGCAGAATCGTCGGGAAGAGGATAATGATCAGGCAGAGGAGTCGTCTAACAGCGGTGTCAATGTGGCCCGCGATCCACAACCGGGCACGAGCGGGATGTCCGGCCGATCGGCTAGAGGCAGCGAATTGGGAGGCATGTTCCGGCTGAATGTAACAATGCGAGAAATGATGTCGTCCGTGGAATCGCACAGAGAGCCCACTGTTGGTAGTAATGAGGCCAATGCTAACGCGGAAGGTAACGTTGATCCACAACCGTCCGGAAGTCGCAGCAATTTGGTTACTTCGAGATCATCACCACCGCACGAAGCGCAGCATGTTGAAGCAGGCCCAATGCGGACAGCAACCACCCGCAGCAAACGTACGTCGACAGAATGGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX621230             [                            GTCCGTAGTGCACGATATACAGGAGCTACCGCACGATGAGGAATCCGATGAAGACGAGGAGGAGCTAGCAGAACGAGAGCAGAATCGTCGGGAAGAGGATAATGATCAGGCAGAGGAGTCGTCGAACAGCGGTGTCAATGTGGCCCGCGATCCACAACCGGGCACGAGCGGGATGTCCGGCCGATCGACTAGAGGCAGCGAATTGGGAGGCATGTTCAGGCTGAATGTGACAATGCGAGAAATGATGTCGTCCGTGGAATCGCACAGAGAGCCCGCTGTTGGTAGTAATGAGGCCAATGCTAACGCGGAAGGTAACGTTGATCCACAACCGTCCGGAAGTCGCAGCAATTTGGTAACTTCGAGATCATCACCACCGCACGAAGCGCAGCATGTTGAAGCAGGCCCAA GCGGACAGCAACCACCTGCAGCAAACGTACGTCGACAGAATGGTCGCGGCAGACGCGTTATGATTACAAGACGAAACCTGCGCTCTGAAAATGCTAGCACCGACGTTTGGGCCACAGAGGTAACGTTCCGGGAGCGTAAGAACATGCCGAGCCCACANGTACGCAACAATCGCGGCCAAATCTACGGCATTGTATCGGGTGTTAGCTCGTCCGCTAGCACCGGTTACACCGGTGCGGGTAGGAAGCGAGCAAACGAAAAGATTTGT AAAATGTACCCCGTATGCTTTATTACATACAAGAAACGATCACAGATCAGGGATTCATCAGAGAGTCCTGCTTTTCCCCCGACGGTCGTATTATCTGCTCGCCG                                                                                                                                                                                                                           ]
[+] EMBL BX620453             [                                                                                                                                                                                                                                                                                                                                                             TCCACAACCGTCCGGAAGTCGCAGCAATTTGGTAACTTCGAGATCATCACCACCGCACGAAGCGCAGCATGTTGAAGCAGGCCCAA GCGGACAGCAACCACCTGCAGCAAACGTACGTCGACAGAATGGTCGCGGCAGACGCGTTATGATTACAAGACGAAACCTGCGCTCTGAAAATGCTAGCACCGACGTTTGGGCCACAGAGGTAACGTTCCGGGAGCGTAAGAACATGCCGAGCCCACAGGTACGCAACAATCGCGGCCAAATCTACGGCATTGTATCGGGTGTTAGCTCGTCCGCTAGCACCGGTTACACCGGTGCGGGTAGGAAGCGAGCAAACGAAAAGATTTGTAAAAATGTACCCCGTATGCTTTATTACATACAAGAAACGATCACAGATCAGGGATTCATCAGAGAGTCCTGCTTTTCGCCCGACGGTCGTATTATCTGCTCGCCGCACGACCACGGTTTTCGTCTGCTGGCGTTTAACGAGAATTGTAACGAGCTGCAACATGCGACGGGCATTTGGCGGAACGAGAAGGCACAGCAGTTGCATGAGGTTAAGCGCAAGCAGTGTCACTCGTCCCTGGTTGTGAGCAGTCAGTTTAGCCCACGGTTTCCTTTGCTTGTAACGGGTTGCCTGCTGGGCAAAATTGTCTGGCATCAACCGGCACTG]


>consensus_7813#0 GGCCAAGAATCGGCACGTAGGCCGAATGGTCCGTAGTGCACGATATACAGGAGCTACGCA CGATGAGGAATCCGATGAAGACGAGGAGGAGCTAGCAGAACGAGAGCAGAATCGTCGGGA AGAGGATAATGATCAGGCAGAGGAGTCGTCTAACAGCGGTGTCAATGTGGCCCGCGATCC ACAACCGGGCACGAGCGGGATGTCCGGCCGATCGGCTAGAGGCAGCGAATTGGGAGGCAT GTTCCGGCTGAATGTAACAATGCGAGAAATGATGTCGTCCGTGGAATCGCACAGAGAGCC CACTGTTGGTAGTAATGAGGCCAATGCTAACGCGGAAGGTAACGTTGATCCACAACCGTC CGGAAGTCGCAGCAATTTGGTAACTTCGAGATCATCACCACCGCACGAAGCGCAGCATGT TGAAGCAGGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGTCGACAGAATGGTCG CGGCAGACGCGTTATGATTACAAGACGAAACCTGCGCTCTGAAAATGCTAGCACCGACGT TTGGGCCACAGAGGTAACGTTCCGGGAGCGTAAGAACATGCCGAGCCCACANGTACGCAA CAATCGCGGCCAAATCTACGGCATTGTATCGGGTGTTAGCTCGTCCGCTAGCACCGGTTA CACCGGTGCGGGTAGGAAGCGAGCAAACGAAAAGATTTGTAAAATGTACCCCGTATGCTT TATTACATACAAGAAACGATCACAGATCAGGGATTCATCAGAGAGTCCTGCTTTTCCCCC GACGGTCGTATTATCTGCTCGCCGCACGACCACGGTTTTCGTCTGCTGGCGTTTAACGAG AATTGTAACGAGCTGCAACATGCGACGGGCATTTGGCGGAACGAGAAGGCACAGCAGTTG CATGAGGTTAAGCGCAAGCAGTGTCACTCGTCCCTGGTTGTGAGCAGTCAGTTTAGCCCA CGGTTTCCTTTGCTTGTAACGGGTTGCCTGCTGGGCAAAATTGTCTGGCATCAACCGGCA CTG



consensusID : consensus_7813#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 907
fasta sequence
                              [GCCCGAGGTNAGTGCAAAAAACAAATAAATTCTTTCATTTTAACTGTTTATTAAGCTACACCGACATTATATTTTNCATCTAAAACGTTTTTGATGTGTTTTTTCTCAT-T-GCGTTTAG-GCGTCGTGTATCAGATCGCAATTGC-TAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATCTACGAGCCGGTAATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGA-CAGTGTAAAATCTGTGCTGTGAGACCTACAGTTGCCTTTCAC-AACCGT-CCGGAAGTCGCAGTGATTT-GGTAACATCAAGT-GCATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCACCT-GCAGCAAACGTACGCCGAACG-AATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGATGAAGCTGGTTTAGTCCTCGATGACGACGCAACTCCTGCACGTTCGTCGTCATACTATCATTTCNACTGGAGGCATGTTTGTTTAGGCGACTACNACAAATTGTTTGAACATGTTCAAAACAACATGGCTTCTCACAATTACTGGTGAATGCTGGGAAATCTCCGTGATAGCCATTTTCGTGCGCTGAATTANGGTTGGTATGAAAAATAGTGTATTTTTAGAATATTTAATTATCAATAAAATAAC]

[+] EMBL AL695656             [GCCCGAGGTNAGTGCAAAAAACAAATAAATTCTTTCATTTTAACTGTTTATTAAGCTACACCGACATTATATTTTNCATCTAAAACGTTTTTGATGTGTTTTTTCTCATATGGCGTTTAGAGCGTCGTGTATCAGATCGCAATTGCGTAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATNTACGAGCCGGTAATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGACCAGTGTAAAATCTGTGCTGTGAGACCTACAGTTGCCTTTCACAAACGGT CCGGAAGTCGCAGTGATTTGGGTAACATCAAGTGGCATCANCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAA CACCTGGCAGCAAACGTACGCCGAACGCAATGGTCGNGGTAGACGCGTAANGATTACANGGCGATACTTGCGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX623338             [                                                        TACACCGACATTATATTTTTCATCTAAAACGTTTTTGATGTGTTTTTTCTCAT T GCGTTTAG GCGTCGTGTATCAGATCGCAATTGC TAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATCTACGAGCCGGTAATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGA CAGTGTAAAATCTGTGCTGTGAGACCTACAGTTGCCTTTCAC AACCGT CCGGAAGTCGCAGTGATTT GGTAACATCAAGT GCATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCACCT GCAGCAAACGTACGCCGAACG AATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGATGAAGCTGGTTTAGTCCTCGATGACGACGCAACTCCTGCACGTTCGTCGTCATACTATCATTTCNACTGGAGGCATGTTTGTTTAGGCGACTACNACAAATTGTTTGAACATGTTCAAAACAACATGGCTTCTCACAATTACTGGTGAATGCTGGGAAATCTCCGTGATAGCCATTTTCGTGCGCTGAATTANGGTTG                                                 ]
[+] EMBL BX612739             [                                                                                                                                                                                             AATCTTCAGTGATGCGTTCACGCATCTACTAGCCGGTAATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGA CAGTGTAAAATCTGTGCTGTGAGACCTACAGTTGCCTTTCAC AACCGTACCGGAAGTCGCAGTGATTT GGTAACATCAAGT GCATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCACCT GCAGCAAACGTACGCCGAACG AATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGATGAAGCTGGTTTAGTCCTCGATGACGACGCAACTCCTGCACGTTCGTCGTCATACTATCATTTCAACTGGAGGCATGTTTGTTTAGGCGACTACAACAAATTGTTTGAACATGTTCAAAACAACATGGCTTCTCACAATTACTGGTGAATGCT GGAAATCTCCGTGATAGCCATTTTCGTGCGCTGAATTA GGTTTGTATGAAAAATAGTGTATTTTTAGAATATTTAATTATCAATAAAATAAC]


>consensus_7813#1 GCCCGAGGTNAGTGCAAAAAACAAATAAATTCTTTCATTTTAACTGTTTATTAAGCTACA CCGACATTATATTTTNCATCTAAAACGTTTTTGATGTGTTTTTTCTCATTGCGTTTAGGC GTCGTGTATCAGATCGCAATTGCTAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGG TACAAAATCTTCAGTGATGCGTTCACGCATCTACGAGCCGGTAATTGGCGGTATCCAGAT CATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGACAGTGTAAAATCTGTGC TGTGAGACCTACAGTTGCCTTTCACAACCGTCCGGAAGTCGCAGTGATTTGGTAACATCA AGTGCATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCA CCTGCAGCAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGA TACTTGCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAAC ATGTCGGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGG CTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGA TGAAGCTGGTTTAGTCCTCGATGACGACGCAACTCCTGCACGTTCGTCGTCATACTATCA TTTCNACTGGAGGCATGTTTGTTTAGGCGACTACNACAAATTGTTTGAACATGTTCAAAA CAACATGGCTTCTCACAATTACTGGTGAATGCTGGGAAATCTCCGTGATAGCCATTTTCG TGCGCTGAATTANGGTTGGTATGAAAAATAGTGTATTTTTAGAATATTTAATTATCAATA AAATAAC



consensusID : consensus_7813#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 782
fasta sequence
                              [TCCCCCGAGGTTAATTGCTAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATCTACGAGCCGGTAATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGACAGTGTAAAATCTGTGCTGTGAGACCTACAGTTGCCTTTCACAACCGTCCGGAAGTCGCAGTGATTTGGTAACATCAAGTGCATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGATGAAGCTGGTTTAGTCCTCGATGACGACGCAATCCTGCACGTTCGTCGTCATACTATCATTTCAACTGGAGGCATGTCTCGTCAGCGCGACTACAACAAATTGTNTGAACATGTCAAACACAACATGGCTTCTCACAATTACTGGTGAATTGCTGGCAATCTCCGTGATAGCCATTCTCGTGCGCTGAANTAGGTCTGCTGACAAATAGGTATTCTCACGNANTATTTNACTTATCACTAAATACCG]

[+] EMBL AL692559             [TCCCCCGAGGTTAATTGCTAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATCTACGAGCCGGTAATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGACAGTGTAAAATCTGTGCTGTGAGACCTACAGTTGCCTTTCACAACCGTCCGGAAGTCGCAGTGATTTGGTAACATCAAGTGCATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGATGAAGCTGGTTTAGTCCTCGATGACGACGCAATCCTGCACGTTCGTCGTCATACTATCATTTCAACTGGAGGCATGTCTCGTCAGCGCGACTACAACAAATTGTNTGAACATGTCAAACACAACATGGCTTCTCACAATTACTGGTGAATTGCTGGCAATCTCCGTGATAGCCATTCTCGTGCGCTGAANTAGGTCTGCTGACAAATAGGTATTCTCACGNANTATTTNACTTATCACTAAATACCG]


>consensus_7813#2 TCCCCCGAGGTTAATTGCTAATAATTTCGTCGTCTGAGACGGACTGTTATGGAGGTACAA AATCTTCAGTGATGCGTTCACGCATCTACGAGCCGGTAATTGGCGGTATCCAGATCATCG TCGTACTGTTAGCTTACCTAAGCTACCGAAATTAGCGACAGTGTAAAATCTGTGCTGTGA GACCTACAGTTGCCTTTCACAACCGTCCGGAAGTCGCAGTGATTTGGTAACATCAAGTGC ATCACCACCGCACGAAGCGCAGCATATTGACGCAAGCCCAAGCGGACAGCAACCACCTGC AGCAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTACAAGGCGATACTT GCGCTCTGAAACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTC GGGCCCACAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGT TACACTTCATCACGAAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACGATGAAG CTGGTTTAGTCCTCGATGACGACGCAATCCTGCACGTTCGTCGTCATACTATCATTTCAA CTGGAGGCATGTCTCGTCAGCGCGACTACAACAAATTGTNTGAACATGTCAAACACAACA TGGCTTCTCACAATTACTGGTGAATTGCTGGCAATCTCCGTGATAGCCATTCTCGTGCGC TGAANTAGGTCTGCTGACAAATAGGTATTCTCACGNANTATTTNACTTATCACTAAATAC CG



consensusID : consensus_7813#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence
                              [CACCACCGCACGAAGCGCAGCATATTGACCCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTGCAAGGCGATACTTGCGCTCTGAAAATGCTAGCACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATACCGGGCCCACAGGTAGGCAACAACCGCGCCCAAATCTATGGCATAGTATTGGGTGTTAGCTCGTCCGCTAGCACCGGTTACACTGGTACGGGTAGGAAGCGTGCAAATGAAAAAATATGTAAAAATGTCGCCCTTATTCCTTTATACATACAAGAAACGATCACGAACGATCAGCATGAAATGCACTTGACTGATATTATTCTTCTTTCTTTAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTGATGGAATGCTGTCAAAACGATGAAGCTGGCTTAGTCCTCGATGACGACAACAAATTGTTT]

[+] EMBL BX620793             [CACCACCGCACGAAGCGCAGCATATTGACCCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTGCAAGGCGATACTTGCGCTCTGAAAATGCTAGCACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATACCGGGCCCACAGGTAGGCAACAACCGCGCCCAAATCTATGGCATAGTATTGGGTGTTAGCTCGTCCGCTAGCACCGGTTACACTGGTACGGGTAGGAAGCGTGCAAATGAAAAAATATGTAAAAATGTCGCCCTTATTCCTTTATACATACAAGAAACGATCACGAACGATCAGCATGAAATGCACTTGACTGATATTATTCTTCTTTCTTTAGTTTCAGATAAGCCGTTCTCATCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTGATGGAATGCTGTCAAAACGATGAAGCTGGCTTAGTCCTCGATGACGACAACAAATTGTTT]


>consensus_7813#3 CACCACCGCACGAAGCGCAGCATATTGACCCAAGCCCAAGCGGACAGCAACCACCTGCAG CAAACGTACGCCGAACGAATGGTCGTGGTAGACGCGTTAGGATTGCAAGGCGATACTTGC GCTCTGAAAATGCTAGCACAGATGTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAA ACATACCGGGCCCACAGGTAGGCAACAACCGCGCCCAAATCTATGGCATAGTATTGGGTG TTAGCTCGTCCGCTAGCACCGGTTACACTGGTACGGGTAGGAAGCGTGCAAATGAAAAAA TATGTAAAAATGTCGCCCTTATTCCTTTATACATACAAGAAACGATCACGAACGATCAGC ATGAAATGCACTTGACTGATATTATTCTTCTTTCTTTAGTTTCAGATAAGCCGTTCTCAT CAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACGAAGGACAATCACATCTG GGTGATGGAATGCTGTCAAAACGATGAAGCTGGCTTAGTCCTCGATGACGACAACAAATT GTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7813#0      GGCCAAGAATCGGCACGTAGGCCGAATGGTCCGTAGTGCACGATATACAGGAGCTACGCA 60
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      ------------------------GCCCGAGGTNAGTGCAAAAAACAAATAAATTCTTTC 36
consensus_7813#2      ------------------------------------------------------------
                                                                                  

consensus_7813#0      CGATGAGGAATCCGATGAAGACGAGGAGGAGCTAGCAGAACGAGAGCAGAATCGTCGGGA 120
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      ATTTTAACTGTTTATTAAGCTACACCGACATTATATTTTNCATCTAAAACGTTTTTGATG 96
consensus_7813#2      ------------------------------------------------------------
                                                                                  

consensus_7813#0      AGAGGATAATGATCAGGCAGAGGAGTCGTCTAACAGCGGTGTCAATGTGGCCCGCGATCC 180
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      TGTTTTTTCTCATTGCGTTTAGGCGTCGTGTATCAG--ATCGCAATTGCTAATAATTTCG 154
consensus_7813#2      -----------------------------TCCCCCG--AGGTTAATTGCTAATAATTTCG 29
                                                                                  

consensus_7813#0      ACAACCGGGCACGAGCGGGATGTCCGGCCGATCGGCTAGAGGCAGCGAATTGGGAGGCAT 240
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      TCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATCTAC 214
consensus_7813#2      TCGTCTGAGACGGACTGTTATGGAGGTACAAAATCTTCAGTGATGCGTTCACGCATCTAC 89
                                                                                  

consensus_7813#0      GTTCCGGCTGAATGTAACAATGCGAGAAATGATGTCGTCCGTGGAATCGCACAGAGAGCC 300
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      GAGCCGGT---AATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTAC 271
consensus_7813#2      GAGCCGGT---AATTGGCGGTATCCAGATCATCGTCGTACTGTTAGCTTACCTAAGCTAC 146
                                                                                  

consensus_7813#0      CACTGTTGGTAGTAATGAGGCCAATGCTAACGCGGAAGGTAACGTTGA--TCCACAACCG 358
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      CGAAATTAGCGACAGTGTAAAATCTG-TGCTGTGAGACCTACAGTTGCCTTTCACAACCG 330
consensus_7813#2      CGAAATTAGCGACAGTGTAAAATCTG-TGCTGTGAGACCTACAGTTGCCTTTCACAACCG 205
                                                                                  

consensus_7813#0      TCCGGAAGTCGCAGCAATTTGGTAACTTCGAGATCATCACCACCGCACGAAGCGCAGCAT 418
consensus_7813#3      -------------------------------------CACCACCGCACGAAGCGCAGCAT 23
consensus_7813#1      TCCGGAAGTCGCAGTGATTTGGTAACATCAAGTGCATCACCACCGCACGAAGCGCAGCAT 390
consensus_7813#2      TCCGGAAGTCGCAGTGATTTGGTAACATCAAGTGCATCACCACCGCACGAAGCGCAGCAT 265
                                                           ***********************

consensus_7813#0      GTTGAAGCAGGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGTCGACAGAATGGT 478
consensus_7813#3      ATTGACCCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGT 83
consensus_7813#1      ATTGACGCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGT 450
consensus_7813#2      ATTGACGCAAGCCCAAGCGGACAGCAACCACCTGCAGCAAACGTACGCCGAACGAATGGT 325
                       ****  ** ************************************* ***  *******

consensus_7813#0      CGCGGCAGACGCGTTATGATTACAAGACGAAACCTGCGCTCTGAAAATGCTAGCACCGAC 538
consensus_7813#3      CGTGGTAGACGCGTTAGGATTGCAAGGCGATACTTGCGCTCTGAAAATGCTAGCACAGAT 143
consensus_7813#1      CGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAA---------CAGAT 501
consensus_7813#2      CGTGGTAGACGCGTTAGGATTACAAGGCGATACTTGCGCTCTGAAA---------CAGAT 376
                      ** ** ********** **** **** *** ** ************         * ** 

consensus_7813#0      GTTTGGGCCACAGAGGTAACGTTCCGGGAGCGTAAGAACATGCCGAGCCCACANGTACGC 598
consensus_7813#3      GTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATACCGGGCCCACAGGTAGGC 203
consensus_7813#1      GTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAG 561
consensus_7813#2      GTTTGGGCCACAGAGGTGACGTTCCGAGATTGTAAAAACATGTCGGGCCCACAGTTTCAG 436
                      ***************** ******** **  **** *****  ** *******  *    

consensus_7813#0      AACAATCGCGGCCAAATCTACGGCATTGTATCGGGTGTTAGCTCGTCCGCTAGCACCG-G 657
consensus_7813#3      AACAACCGCGCCCAAATCTATGGCATAGTATTGGGTGTTAGCTCGTCCGCTAGCACCG-G 262
consensus_7813#1      ATAAGCCGTTCTCA--TCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACG 619
consensus_7813#2      ATAAGCCGTTCTCA--TCAATGCCATACCATGTACGGTCGGCTAGTTACACTTCATCACG 494
                      *  *  **    **  ** * * ***   **     **  *** **       ** *  *

consensus_7813#0      TTACACCGGTGCGGGTAGGAAGCGAGCAAACGAAAAGATTTGTAAAA-TGTACCCCGTAT 716
consensus_7813#3      TTACACTGGTACGGGTAGGAAGCGTGCAAATGAAAAAATATGTAAAAATGTCGCCCTTAT 322
consensus_7813#1      AAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACG-ATGAAGCTGG----TTTAG 674
consensus_7813#2      AAGGACAATCACATCTGGGTCACGGAATGCTGCCAAAACG-ATGAAGCTGG----TTTAG 549
                          **     *   * **   **       *  ** *    * **  **       ** 

consensus_7813#0      GCTTTATTACATACAAGAAACGATCACAGATCAGGGATTCATCAGAGAGTCCTGCTTTTC 776
consensus_7813#3      TCCTTTATACATACAAGAAACGATCACGAACGA-----TCAGCATGAAATGC-ACTTGAC 376
consensus_7813#1      TCCTCGATGACGACGCAACTCCTGCACGTTCG------TCGTCATACTATCA---TTTCN 725
consensus_7813#2      TCCTCGATGACGACGCAA-TCCTGCACGTTCG------TCGTCATACTATCA---TTTCA 599
                       * *   *    **   *  *   ***           **  **     *     **   

consensus_7813#0      CCCCGACGGTCGTATTATCTGCTCGCCGCACGACCACGGTTTTCGTCTGCTGGCGTTTAA 836
consensus_7813#3      TGATATTATTCTTCTTTCTT--TAGTTTCAGATAAGCCGTTCTCATCAA-TGCCATACCA 433
consensus_7813#1      ACTGGAGGCATGTTTGTTTAG-GCGACTACNACAAATTGTTTGAACATG-TTCAAAACAA 783
consensus_7813#2      ACTGGAGGCATGTCTCGTCAGCGCGACTACAACAAATTGTNTGAACATG-TCAAACACAA 658
                                  * *         *             **          *        *

consensus_7813#0      CGAGAATTGTAACGAGCTGCAACATGCGACGGGCATTTGGCGGAACGAGAAGGCACAGCA 896
consensus_7813#3      TGTACGGT-CGGCTAGTTACACTTCATCACGAAGGACAATCACATCTGGGTGATGGAATG 492
consensus_7813#1      CATGGCTTCTCACAATTACTGGTGAATGCTGGGAAATCTCCGTGATAGCCATTTTCGTGC 843
consensus_7813#2      CATGGCTTCTCACAATTACTGGTGAATTGCTGGCAATCTCCGTGATAGCCATTCTCGTGC 718
                             *    * *                         *                   

consensus_7813#0      GTTGCATGAGGTTAAGCGCAAGCAGTGTCACTCGTCCCTGGTTGTGAGCAGTCAGTTTAG 956
consensus_7813#3      CTGTCAAAACGATGA-----AGCTGGCTTAGTCCTCGATGACGACAACAAATTGTTT--- 544
consensus_7813#1      GCTGAATTANGGTTGGTATGAAAAATAGTGTATTTTTAGAATATTTAATTATCAATAAAA 903
consensus_7813#2      GCTGAANTAGGTCTGCTGACAAATA-GGTATTCTCACGNANTATTTNACTTATCACTAAA 777
                           *  * *         *                                       

consensus_7813#0      CCCACGGTTTCCTTTGCTTGTAACGGGTTGCCTGCTGGGCAAAATTGTCTGGCATCAACC 1016
consensus_7813#3      ------------------------------------------------------------
consensus_7813#1      TAAC-------------------------------------------------------- 907
consensus_7813#2      TACCG------------------------------------------------------- 782
                                                                                  

consensus_7813#0      GGCACTG 1023
consensus_7813#3      -------
consensus_7813#1      -------
consensus_7813#2      -------
                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)