Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7819 cluster # 7819       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7819#0 length = 1000 sequences # 8  

consensusID : consensus_7819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1000
fasta sequence
                              [ATGTTTACAATATTTTCAGATCATCACTTTTTTGCATTAAATTTTAGCGTTTTTACTTTGCGTGGGCTTTTAAGTCATTAAATGAGTAACTAAAACGTTACA-GGTGATACCGTTACGGACAGTAGTCCGAT-GAACCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGAT-AAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGAGCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCAC-CAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAGCAACCCG-ATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACTACCAACAGCAGTATCAATT-CCACCGACCAGGACGGCGAGCTCAATGATCGGGACACGTGCGACAAAGGAGATAAGGGAACGGGAAAGTCCAACCAGCGGGTTGATATATTTGCGATGATACT-GAATCAAAAGAAAAGCTCCCTGCTGTGCGATCCGGAGGTGATTCAGTTTATGAAAAACCTAACCGAGGGCAAGAAATGAAAATCCCAACGTTAACATCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGGGCAAGTTTACAAATTTGCTTAAGTAATGTGCA-ATGTGAAATTAGCACTGGACTATGTGAAACATCAAAGCTTAGAGCAGATTAAAATAATAAAATAAATAGAGATAAACTCATTAAACATTCTGATGAAGGAAGTTTTTATTCAGCAATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGT]

[+] EMBL BX622593             [ATGTTTACAATATTTTCAGATCATCACTTTTTTGCATTAAATTTTAGCGTTTTTACTTTGCGTGGGCTTTTAAGTCATTAAATGAGTAACTAAAACGTTACA GGTGATACCGTTACGGACAGTAGTCCGAT GAACCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGAT AAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGAGCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCAC CAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAGCAACCCG ATNGAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACTACCAACAGCAGTATCAATT CCACCGACCAGGACGGCGAGCTCAATGATCGGGACACGTGCGACAAAGGAGATAAGGGAACGGGAAAGTCCAACCAGCGGGTTGATATATTTGCGATGATACTGGAATCAAAAGAAAAGCTCCCTGCTGTGCGATCCGGAGGTGATT                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09A3E             [                         ACTTTTTTGTATTAAATTTTAGCGTTTTTACTTTGCGTGGGCTTTTAAGTCATTAAATGAGTAACTAAAACGTTACATGGTGATACCGTTACAGACAGTAGTCCGAT GAACCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGAT AAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGACCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCACTCAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAGCAACCCG ATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACGACTAACAGCAGTATCAATT CCACCGACCAGGACGGCGAGCTGAATGATCGGGACACGTGCGACAAAGGCGATAAGGGAGCTGGAAAGTCCAACCAGCGAGTTGATATATTTGCGATGATACT GAATCAAAAGAAAAGCTCCCTGCTGTGTGATCCGGAGGTGATTCAGTTTATGAAAAACCTAACCGAGGGCAAGAAATGAAAATCCCAACGTTAACATCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGGGCAAGTTTACAAATTTGCTTAAGTAATGTGCA ATGTGAAATTAGCACT                                                                                                                                        ]
[+] EMBL CNS09K9I             [                                                      ACTTTGCGTGGGCTTTTAAGTCATTAAATGAGTAACTAAAACGTTACA GGTGATACCGTTACGGACAGTAGTCCGAT GATCCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGAT AAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGAGCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCAC CAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAACAACCCG ATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACTACCAACAGCAGTATCAATT CCACCGACCAGGACGGCGAGCTCAATGATCGGGACACGTGCGACAAAGGAGATAAGGGAACGGGAAAGTCCAACCAGCGGGTTGATATATTTGCGATGATACT GAATCAAAAGAAAAGCTCCCTGCTGTGCGATCCGGA GTGATTCAGTTTATGAAAAACCTGACCGAGGGCAAGAAATGAACATCCCCACGTTGACAGCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGTGCAAGATTGGAATTTTGCTTAAGTAATGTGCA ATGTGAAATTAGCACTGGACTATGTG AACATCAAAGCTTAGAGCAGATTAAAATAATAAAATAAATAGAGATAAACTCATTAAACATTCTGATGAAGGAAGTTTTTATTCAGCAATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGT]
[+] EMBL CNS09A33             [                                                               GGGCTTTTAAGTCATTAAATGAGTAACTAAAACGTTACA GGTGATACCGTTACAGACAGTAGTACGATAGAACCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGAT AAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS09K9J             [                                                                                                                              TCAGAT GATCCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGAT AAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGAGCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCAC CAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAACAACCCG ATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACTACCAACAGCAGTATCAATT CCACCGACCAGGACGGCGAGCTCAATGATCGGGACACGTGCGACAAAGGAGATAAGGGAACGGGAAAGTCCAACCAGCGGGTTGATATATTTGCGATGATACT GAATCAAAAGAAAAGCTCCCTGCTGTGCGATCCGGAGGTGATTCAGTTTATGAAAAACCTGACCGAGGGCAAGAAATGAACATCCCCCCGTTGACAGCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGTGCAAGATTGGAATTTTGCTTAAGTAATGTGCA ATGTGAAATTAGCACTGGACTATGTGAAACATCAAAGCTTAGAGCAGATTTAAATAATAAAATAAATAGAGATAAACTCATTAAACATTCTGATGAAGG                                                     ]
[-] EMBL CNS09A3F             [                                                                                                                                                                                AAATGCAGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGGCCACCAAGGAATGCGACGATAAAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGACCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCAC CAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAGCAACCCGAATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACGACTAACAGCAGTATCAATTACCACCGACCAGGACGGCGAGCTGAATGATCGGGACACGTGCGACAAAGGCGATAAGGGAGCTGGAAAGTCCAACCAGCGAGTTGATATATTTGCGATGATACT GAATCAAAAGAAAAGCTCCCTGCTGTGTGATCCGGAGGTGATTCAGTTTATGAAAAACCTAACCGAGGGCAAGAAATGAAAATCCCAACGTTAACATCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGGGCAAGTTTACAAATTTGCTTAAGTAATGTGCA ATGTGAAATTAGCACTGGACTATGCGAAACAGCAAAGCATAGAACAGATTAAAATAATAAAATAAATAGAGATAc                                                                             ]
[+] EMBL BX611923             [                                                                                                                                                                                                                                             GATGGCCACCAAGGAATGCGACCTT TAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACGTCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAGACCGGAGCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAGCTAAAAGACAGAAAACCAC CAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCGGAACAGGCTCATCGATTGCTTCGACAGCAACCCG ATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAACAGTAACGATACTACCAACAGCAGTATCAATT CCACCGACCAGGACGGCGAGCTCAATGATCGGGACACGTGCGACAAAGGAGATAAGGGAACGGGAAAGTCCAACCAGCGGGTTGATATATTTGCGATGATACT GAATCAAAAGAAAAGCTCCCTGCTGTGCGATCCGGAGGTGATTCAGTTTATGAAAAACCTGACCGAGGGCAAGAAATGAACATCCCCACGTTGACAGCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGTGCAAGATTGGAATTTTGCTTAAGTAATGTGCA AT                                                                                                                                                      ]
[-] EMBL CNS09A34             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCG ATCCAATGATCTGCTCCTTTCGCCCGGAGCGGCCAAAAGTAACGATACGACTAACAGCAGTATCAATT CCACCGACCAGGACGGCGAGCTGAATGATCGGGACACGTGCGACAAAGGCGATAAGGGAGCTGGAAAGTCCAACCAGCGAGTTGATATATTTGCGATGATACT GAATCAAAAGAAAAGCTCCCTGCTGTGTGATCCGGAGGTGATTCAGTTTATGAAAAACCTAACCGAGGGCAAGAAATGAAAATCCCAACGTTAACATCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGGGCAAGTTTACAAATTTGCTTAAGTAATGTGCATATGTGAAATTAGCACTGGACTATGCGAAACAGCAAAGCATAGAACA                                                                                                          ]


>consensus_7819#0 ATGTTTACAATATTTTCAGATCATCACTTTTTTGCATTAAATTTTAGCGTTTTTACTTTG CGTGGGCTTTTAAGTCATTAAATGAGTAACTAAAACGTTACAGGTGATACCGTTACGGAC AGTAGTCCGATGAACCACACAGCTGATTGAGAAACCCATTTGTTTACACCATGCAAATGC AGCTGGGCGCGATTCCCCCACGATAAGCAACGAAAGTGAAAGTGCCAGCGATAACGATGG CCACCAAGGAATGCGACGATAAAAGTGATATAAAAATCAAGGAAAAGCTTAACCTGCACG TCAAGAAACGATTGCAGGAAAATGGAAAAGAAGCATCGCTAGAGAAAAATGATTCCAAAG ACCGGAGCATCCCTGCCAACACGGCAGCAGCCCCCAGCTCGTCCGCTGCTCCTCCGCGAG CTAAAAGACAGAAAACCACCAAAAGTTCCTCGAAACAGACGACAAACGCATCAGTGGCCG GAACAGGCTCATCGATTGCTTCGACAGCAACCCGATCCAATGATCTGCTCCTTTCGCCCG GAGCGGCCAACAGTAACGATACTACCAACAGCAGTATCAATTCCACCGACCAGGACGGCG AGCTCAATGATCGGGACACGTGCGACAAAGGAGATAAGGGAACGGGAAAGTCCAACCAGC GGGTTGATATATTTGCGATGATACTGAATCAAAAGAAAAGCTCCCTGCTGTGCGATCCGG AGGTGATTCAGTTTATGAAAAACCTAACCGAGGGCAAGAAATGAAAATCCCAACGTTAAC ATCCAATTTGTGTTCAGTTTGTTCTCGTACTCTAGGGCAAGTTTACAAATTTGCTTAAGT AATGTGCAATGTGAAATTAGCACTGGACTATGTGAAACATCAAAGCTTAGAGCAGATTAA AATAATAAAATAAATAGAGATAAACTCATTAAACATTCTGATGAAGGAAGTTTTTATTCA GCAATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)