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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7849#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1045 fasta sequence
[CCGTTTCGGGCGAATTATTTTGCACGCATTCAAAAATTAACGCCGGAATTCTAACAAAAAGTGATAAAAAACTAATTCAAAATGAACAGAACAGTGAAACCGCGCAAGAAAAAAAGCATAGAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAAAAAGTACCATTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTGGAGGACGCATGCATGGAGGAGTCGAATTTAGAAGAGCTGCCCACAAGCTCCACAACAACGAAAGAAGTGGGCGATTTAGTGATTAAACGAGCGCCA-CCCCCCGCACTGATTAGGCCAGTGAAGCAGTCCAAGCTGATGGCCAAGCCGCGCTACAGCATGGCACCGGAAATTTGTTGCGGTCAAGGCGGAACCACGGTCGCGCTCGCCGTCACCAGCCCCGAGCGAGGNACGCGGCTGCAATATACTGCACACACAGGACGAGGACGAGATATACGGGCACAGTGTGGCGCTGCTGCTGAAACAGTTCTCGGCCAAGACGAAGCGGAAGCTGCGCATCCAAATACAC-GACCTGATAGCGAAGGCGCAGAAGCACGCGTTCGAGAAGCAGTTCGGTGTGCCTTACGATGGGAAAAAATGATAGCTTCCAAGGAAGGCGCACAACAGCAGCAGTAGTGTGTAAGGAAATAGAGTATTATTAAGTTGTTTTTCGAATGTATGACGAGCATTTAGCAGACGC]
[+] EMBL BM640243 [CCGTTTCGGGCGAATTATTTTGCACGCATTCAAAAATTAACGCCGGAATTCTAACAAAAAGTGATAAAAAACTAATTCAAAATGAACAGAACAGTGAAACCGCGCAAGAAAAAAAGCATAGAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAAAAAGTACCATTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCCATCGAAACGGACGAAACTGGAGGACGCATGCATGGAGGAGTCGAATTTAGAAGAGCTGCCCACAAGCTCCACAACAACGAAAGAAGTGGGCGATCTAGTGATTAAACGAGCACCA CCCCCCGCACTGATTAGGCCAGTGAAGCAGTCCAAGCTGATG ]
[+] EMBL BM617675 [ cCGGGCGAATTATTTTGCACGCATTCAAAAATTAACGCCGGAATTCTAACAAAAAGTGATAAAAAACTAATTCAAAATGAACAGAACAGTGAAACCGCGCAAGAAAAAAAGCATAGAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAAAAAGTACCATTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGCGCGGACGATCT ]
[+] EMBL BM587149 [ ccGGCGAATTATTTTGCACGCATTCAAAAATTAACGCCGGAATTCTAACAAAAAGTGATAAAAAACTAATTCAAAATGAACAGAACAGTAAAACCGCGCAAGAAAAAAAGCATAGAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAAAAAGTACCATTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTGGAGGACGCATGCATGGAGGAGTCGAATTTAGAAGAGCTGCCCACAAGCTCCACAACAACGAAAGAAGTGGGCGATTTAGTGATTAAACGAGCGCCA CCCCCCGCACTGATTAGGCCAGTGAAGCAGTCCAAGCTGATGGCCAAGCCGC ]
[+] EMBL CNS09BFR [ AAAAAACTAATTCAAAATGAACAGAACAGTGAAACCGCGCAAGAAAAAAAGCATAGAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAAAAAGTACCATTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATCGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTTCTGTGATAGCGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCCATCGAAACGGACga ]
[+] EMBL BX627961 [ ATTCAAAATGAACAGAACAGTAAAACCGCGCAAGAAAAAAAGCATAGAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAAAAAGTACCATTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTGGAGGACGCATGCATGGAGGAGTCGAATTTAGAAGAGCTGCCCACAAGCTCCACAACAACGAAAGAAGTGGGCGATTTAGTGATTAAACGAGCGCCACCCCCCCGCACTGATTAGGNCAGTGAAGCAGTCCAAGCTGATGGNCAAGCCGCGCTACAGCATGGCACCGGAAATTTGTTGCGGTCAAGGCGGAACCACGGTCGCGCTCGCCGTCACCAGCCCCGAGCGAGGNACGCGGCTGC ]
[+] EMBL BX625460 [ CATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTGGAGGACGCATGCATGGAGGAGTCGAATTTAGAAGAGCTGCCCACAAGCTCCACAACAACGAAAGAAGTGGGCGATTTAGTGATTAAACGAGCGCCA CCCCCCGCACTGATTAGGCCAGTGAAGCAGTCCAAGCTGATGGCCAAGCCGCGCTACAGCATGGCACCGG AATTTGTTGCGGTCAAGGCGGAACCACGGTCGCGCTCGCCGTCACCAGCCCCGAGCGAGGTACGCGGCTGCAATATACTGCACACACAGGACGAGGACGAGATATACGGGCACAGTGTGGCGCTGCTGCTGAAACAGTTCTCGGCCAAGACGAAGCGGAAGCTGCGCATCCAAATACAC GACCTGATAGCGAAGGCGCAGAAGCACGCGTTCGAGAAGCAGTTCGGTGTGCCTTACGATGGGAAAAAATGATAGCTTCCAAGGAAGGCGCACAACAGCAGCAGTAGTGTGTAAGGAAATAGAGTATTATTAAGTTGTTTTTCGAATGTATGACGAGCATTTAGCAGACGC]
[-] EMBL CNS09BFS [ AAATACACAGACCTGATAGCGAAGGCGCAAAAGCACGCGTTCGAGAAGCAGTTCGGTGTGCCTTACGATGGGAAAAAATGATAGCTTCCAAGG ]
consensusID : consensus_7849#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence
[GGCAGAATCNGCACGNTGGACTACTTCATCGAGGAGCTGANCAAAGTACCNNTTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGGTAAGTGTGCCGGCGTTTTGCTTTTGTTGTAGCTGCAAGCTCTCTAGTCGTGTCGAACATACAATTTCAGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTGGAGGACGCATGCATGGAGGAGTCGAATTAGAAGAGCTGCCACAAGCTCCAGCAACGAACGAAACGAANGTGGGCGATTTCAGTGATTTCAAACGAGGCGCCAACCCCCGGCACTGACTATACGGGCCAGTGAAGCAGTNCAAG]
[+] EMBL BX467167 [GGCAGAATCNGCACGNTGGACTACTTCATCGAGGAGCTGANCAAAGTACCNNTTGTCTGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCGAGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTACGCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACACCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAGAGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGGTAAGTGTGCCGGCGTTTTGCTTTTGTTGTAGCTGCAAGCTCTCTAGTCGTGTCGAACATACAATTTCAGCCACCGACAAGGATCCGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTGGAGGACGCATGCATGGAGGAGTCGAATTAGAAGAGCTGCCACAAGCTCCAGCAACGAACGAAACGAANGTGGGCGATTTCAGTGATTTCAAACGAGGCGCCAACCCCCGGCACTGACTATACGGGCCAGTGAAGCAGTNCAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7849#0 CCGTTTCGGGCGAATTATTTTGCACGCATTCAAAAATTAACGCCGGAATTCTAACAAAAA 60
consensus_7849#1 ------------------------------------------------------------
consensus_7849#0 GTGATAAAAAACTAATTCAAAATGAACAGAACAGTGAAACCGCGCAAGAAAAAAAGCATA 120
consensus_7849#1 --------------------------------------------------------GGCA 4
*
consensus_7849#0 GAAATGACACGGGAAGAGACGCTCTACTTCATCGAGGAGCTGAA-AAAGTACCATT-GTC 178
consensus_7849#1 GAATCNGCACG-------NTGGACTACTTCATCGAGGAGCTGANCAAAGTACCNNTTGTC 57
*** **** * ******************** ******** * ***
consensus_7849#0 TGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCG 238
consensus_7849#1 TGTGGGATCGCAACGACGAGGGCCACAAGGATAAGCATGTGCGTGACACGGCGTGGGGCG 117
************************************************************
consensus_7849#0 AGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTAC 298
consensus_7849#1 AGCTTTCCGTCAAGCTGGGCTACAGTGCGGACGATCTGGTGGAAAAATGGGCCTCCCTAC 177
************************************************************
consensus_7849#0 GCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACA 358
consensus_7849#1 GCTCCTCGATGCGCCAGTACCGATGCACGATACGGAAAAGGAATGCGGCTGGCATTGACA 237
************************************************************
consensus_7849#0 CCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAG 418
consensus_7849#1 CCCGGCTGCCGTTCATCAAGTGGCCCTACTTTTCGGCCATGCTGTTTACGGTAAGCGAAG 297
************************************************************
consensus_7849#0 AGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCG------------------------- 453
consensus_7849#1 AGCTGGATGGGTTAGAAGACAGTCCTGTGATAGCGGTAAGTGTGCCGGCGTTTTGCTTTT 357
***********************************
consensus_7849#0 ---------------------------------------------CCACCGACAAGGATC 468
consensus_7849#1 GTTGTAGCTGCAAGCTCTCTAGTCGTGTCGAACATACAATTTCAGCCACCGACAAGGATC 417
***************
consensus_7849#0 CGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTG 528
consensus_7849#1 CGGCTACCGCGAGCAGACCAGGATGAAGGCGTAGGAAGTCTATCGAAACGGACAAAACTG 477
************************************************************
consensus_7849#0 GAGGACGCATGCATGGAGGAGTCGAATTTAGAAGAGCTGCCCACAAGCTCCA-CAAC-AA 586
consensus_7849#1 GAGGACGCATGCATGGAGGAGTCGAATT-AGAAGAGCTGCC-ACAAGCTCCAGCAACGAA 535
**************************** ************ ********** **** **
consensus_7849#0 CGAAA--GAAGTGGGCGATTT-AGTGATT--AAACGAG-CGCCACCCCCCG-CACTGATT 639
consensus_7849#1 CGAAACGAANGTGGGCGATTTCAGTGATTTCAAACGAGGCGCCAACCCCCGGCACTGACT 595
***** * *********** ******* ******* ***** ****** ****** *
consensus_7849#0 A----GGCCAGTGAAGCAGTCCAAGCTGATGGCCAAGCCGCGCTACAGCATGGCACCGGA 695
consensus_7849#1 ATACGGGCCAGTGAAGCAGTNCAAG----------------------------------- 620
* *************** ****
consensus_7849#0 AATTTGTTGCGGTCAAGGCGGAACCACGGTCGCGCTCGCCGTCACCAGCCCCGAGCGAGG 755
consensus_7849#1 ------------------------------------------------------------
consensus_7849#0 NACGCGGCTGCAATATACTGCACACACAGGACGAGGACGAGATATACGGGCACAGTGTGG 815
consensus_7849#1 ------------------------------------------------------------
consensus_7849#0 CGCTGCTGCTGAAACAGTTCTCGGCCAAGACGAAGCGGAAGCTGCGCATCCAAATACACG 875
consensus_7849#1 ------------------------------------------------------------
consensus_7849#0 ACCTGATAGCGAAGGCGCAGAAGCACGCGTTCGAGAAGCAGTTCGGTGTGCCTTACGATG 935
consensus_7849#1 ------------------------------------------------------------
consensus_7849#0 GGAAAAAATGATAGCTTCCAAGGAAGGCGCACAACAGCAGCAGTAGTGTGTAAGGAAATA 995
consensus_7849#1 ------------------------------------------------------------
consensus_7849#0 GAGTATTATTAAGTTGTTTTTCGAATGTATGACGAGCATTTAGCAGACGC 1045
consensus_7849#1 --------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||