cluster # 785

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 785 cluster # 785 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_785#0 length = 313 sequences # 1

consensus_785#1 length = 226 sequences # 1

consensusID : consensus_785#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 313
fasta sequence

                              [GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAGCATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGATAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTGTAAAACTGTGTAAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTACGACATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTTAGTCCATCATTTACA]

[+] EMBL AGA281088            [GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAGCATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGATAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTGTAAAACTGTGTAAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTACGACATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTTAGTCCATCATTTACA]




>consensus_785#0
GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAG
CATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGA
TAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTGTAAAACTGTGT
AAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTACGA
CATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTTAG
TCCATCATTTACA

consensusID : consensus_785#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 226
fasta sequence

                              [ACTTCATTGAACTCTAGCTAGATTTGTTCGTTTTTTGCGATTGAGGCACTGCATATATCACGCGATACATTTAGAAGTTAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTCTAGTTAAAATGACGTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGCGAGTTCAAAGTGTAAATGATGGACTAAATTGTTATCTAAAATAGTA]

[+] EMBL AGA282715            [ACTTCATTGAACTCTAGCTAGATTTGTTCGTTTTTTGCGATTGAGGCACTGCATATATCACGCGATACATTTAGAAGTTAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTCTAGTTAAAATGACGTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGCGAGTTCAAAGTGTAAATGATGGACTAAATTGTTATCTAAAATAGTA]




>consensus_785#1
ACTTCATTGAACTCTAGCTAGATTTGTTCGTTTTTTGCGATTGAGGCACTGCATATATCA
CGCGATACATTTAGAAGTTAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTC
TAGTTAAAATGACGTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGC
GAGTTCAAAGTGTAAATGATGGACTAAATTGTTATCTAAAATAGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_785#0      GGCATCTGCGGTGCGGTGCTATCGCGCACTGCCAACCTCAAGCGGCATATGAAGCTGAAG 60
consensus_785#1      -------------------------------------------ACTTCATTGAACTCTAG 17
                                                                     **  * **  **

consensus_785#0      CATGAACCATGAGGTCCGACGGCACGTCCGACGTAAACTTTGCCGTGAATGTTGTTTGGA 120
consensus_785#1      CTAGATTTGTTCGTTTT--TTGCGATTGAGGCACTGCATATATCACGCGATACATTTAGA 75
                     *  **    *  * *      **   *  * *      * *  *  *       *** **

consensus_785#0      TAGTGTTCTGGCAAACATTACTTTTCTTGTTTGTTTCACATATGTATTG--TAAAACTGT 178
consensus_785#1      -AGT-TAACAGCAAACGAAAACTCTTGCTATAATCACGCACTTATTCTAGTTAAAATGAC 133
                      *** *    ******   *  * *     *  *  * **  * *  *   *****    

consensus_785#0      GTAAAGATTGAAAGTGACCATCTGTTGTTTTCGGCTCACTTTCACACCCTTTCGTGGTAC 238
consensus_785#1      GTAATGATTAAAATCGTTTTAAAATGGTTTTATCTTTTTTCTTCAGCGAGTTCAAAGTGT 193
                     **** **** ***  *        * *****    *   * *    *   ***   **  

consensus_785#0      GACATANCGTACTGGGATTATCCATCGTGTCGTGAGCGTTACTATTTTAGATAACAATTT 298
consensus_785#1      AA-ATGATGGACTAAATTGTTATCTAAAATAGTA-------------------------- 226
                      * **   * ***    *  *   *    * **                           

consensus_785#0      AGTCCATCATTTACA 313
consensus_785#1      ---------------