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Anopheles gambiae
cluster # 7852 cluster # 7852       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7852#0 length = 1031 sequences # 8  

consensusID : consensus_7852#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1031
fasta sequence
                              [AATCGGCCGAGGTCAATCTTGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG-GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG-CCGGGATGCAGAATATCCACCGCCCGA-GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA-GACGGG-TGTTACTGAGGAAGCGATCAA-G-AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA-CTGTCTCTTCCACG-AGGCCAAGGTGGTGGACGA-CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT-CGATGCACGACATCGCGATGCACATGGGCAAGC-GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGT-AAAAAAAA------ATCACAAAACGGATCGTCCGACCACCGGCTAAAGGAATGTACGATCAAACGATCCACACCTTTCCCCCGACAAAGGATAATTCTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTCGCTCCCGC-TTTCCCGACCG-GCCCGCGCGTCACTCACGGCGTAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAATTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCTGCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAACTTGAAAACTGCATACACTCAGACTGGTGTGCCGGCATTGAGAAACAACTGCAAAGCAAAAAAAAAAAAAA]

[+] EMBL AL934616             [AATCGGCCGAGGTCAATCTTGTGTCGTCTCTCCGGTCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACGTAGTTCTAGAGCCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTGATTGTGCTGCTCCATGACATTGGGCGACACTACACCCCGACCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAACGACGGGCTGTTACTGAGGAAGCGATCAACG AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AF437884             [        tgtttaAATCTTGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGT AAAAAAAA      ATCACAAAACGGATCGTCCGACCACCGGCTAAGGGAATGTACGATCAAACGATCCACACCTTTCCCCCGAGAAAGGATAATTCTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACAGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTCACGACCTGTCGCTCCCGC TTTCCCGACCG GCCCGCGCGTCACTCACGGCGTAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAATTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCTGCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAACTTGAAAACTGCATACACTCAGACTGGTGTGCCGGCATTGAGAAACAACTGCAAAGCAAAAAAAAAAAAAA]
[+] EMBL CNS08S4O             [                   TGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA GCAAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09GFV             [                     TGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATTTGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AGGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGCGGGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGTAAAAAAAAA      ATCACAAAACGGATCGTCCGGCCACCGGCAAAAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX622496             [                                                                                      CATGAAGCTAGTGACCTTCGTGTTTGCTGTCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCG CCGGGATGCAGAATATCCACCGCCCGA GTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAA CTGTCTCTTCCACG AAGCCAAGGTGGTGGACGA CAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCT CGATGCACGACATCGCGATGCACATGGGCAAGC GGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAGTGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGT AAAAAAAAAAAAATATCACAAAACGGATCGTCCGACCACCGGCTAAAGGAATGTACGATCAAACGATCCACACCTTTCCCCCGACAAAGGATAATTCTTTTACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCCACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTCGGTCCCGCTTTTCCCGACCG                                                                                                                                                                                                                                                          ]
[+] EMBL AL932824             [                                                                                                                                                                            gTATCCACCGGCCGAGGTTGCTGGAGGCACTGAAACCACTGGACGATATTTGCCTCGGAAA GACGGG TGTTACTGAGGAAGCGATCAA G AAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAATGCTACATGAAGCTGTCTCTTCCACGAAGGCCAAGGTGGTGGACGACCAATGGGGACGTGCATCTGGAGAAGCTGCACGATTCGCTCCCGAGCTACGATGCACGACATCGCGATGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS09GFW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTCCCCCGACAAAGGATAATTTTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTTGCTCCCGC                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08S4P             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTCCGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAACCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGCTGCTCCCGC TTTCCCGACCGCGGGC CGCGTCACTCACGGCGAAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAATTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCTGCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAACTTGAAAACTGCATACACTCAGACTGGTG GCCGGCATTGAGAAACAA                       ]


>consensus_7852#0 AATCGGCCGAGGTCAATCTTGTGTCGTCTCTCCGATCCAGTTGCAGGAGGAGTATTGATT TGAGGTTTGCCACATAGTTCTAGAACCATGAAGCTAGTGACCTTCGTGTTTGCTGCCTTG GTGTGCTGTTCCATGACATTGGGCGACACTACACCCCGCCGGGATGCAGAATATCCACCG CCCGAGTTGCTGGAGGCACTGAAACCACTGCACGATATTTGCCTCGGAAAGACGGGTGTT ACTGAGGAAGCGATCAAGAAGTTCAGCGACGAGGAGATCCACGAGGACGAAAAGCTCAAA TGCTACATGAACTGTCTCTTCCACGAGGCCAAGGTGGTGGACGACAATGGGGACGTGCAT CTGGAGAAGCTGCACGATTCGCTCCCGAGCTCGATGCACGACATCGCGATGCACATGGGC AAGCGGTGCCTCTATCCCGAGGGTGAAACACTCTGCGACAAGGCGTTCTGGCTGCACAAG TGCTGGAAGCAGTCCGATCCGAAGCACTATTTCTTAGTGTAAAAAAAAATCACAAAACGG ATCGTCCGACCACCGGCTAAAGGAATGTACGATCAAACGATCCACACCTTTCCCCCGACA AAGGATAATTCTTTCACCGTGGATCCTCGTGCGGACGCCAGCACGGACCGGCTCGTGGTC CGGAATAGTAATTAACCCATTTCGCTTGCATTCTGCACTGCACGTAGTTTCCCAACCCAA CCTGTGACTAACCAACTTTAACGCAACCATTTGACGACGTGTCGCTCCCGCTTTCCCGAC CGGCCCGCGCGTCACTCACGGCGTAAGGGCCGAAATGGTGCGAATGAATGAAATTCAAAA TTTAAACTACCCAAACTTCCACAGCTCAAAGCGCCCACTAACCCTTCTTGCTTCGTGTCT GCGAACAGGAACTCTGGAACTGCAGCTTACAAAAAACTGTATTAAAAAAAAGAAATAAAA CTTGAAAACTGCATACACTCAGACTGGTGTGCCGGCATTGAGAAACAACTGCAAAGCAAA AAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)