cluster # 7873

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Anopheles gambiae
cluster # 7873 cluster # 7873 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7873#0 length = 1693 sequences # 6

consensus_7873#1 length = 858 sequences # 1
consensus_7873#2 length = 733 sequences # 1

consensusID : consensus_7873#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1693
fasta sequence

                              [GCAAGAACTCGCCACGAGGTTTACATGGACTGCACCATCTCGTAAGATGGGGGTAGGCGGGCGATGCGTGGCGGCTGTTTTGTTTACTTTTTTTATATTTCCGTTCAGCTGTGTGTGTGTGTGTGTTTACTTAATCGAAGCGAGAAGGAGGAAGGGAAACAAAGGAAGATGCTTAATTGAACCCGGGGGACCTCTTCCTGTGTGCTCCGCTCTACCCAGCACACACACACACACGCACGCACGCAATCGCGTTGTNTATCATCGCGTCACCGATTAGTCGTAGGATTGTTGTTGTTTATGCTCTTCGAGTGGAGGGGGGGCAAACAGGGGATGATATAGATAGGAAGCAGGCTGTTGTTACA-TACACCCGCTCGGTAGGAATACTCTCTCTC-GTCTCTAAGGGCAC-GGGAAGGAGGATGGCTCTGCGCTGGACAGTAAAGTTTGTTATAGGAAGCGATCTGATTTTTTGTTTATTTTACAAATTCTCCCCCGCCCCACCCAACACGAGGACGACAATTTATAGATTAGAAGCGTATACACTAAGCAATAGCTGTATCTCTCCCTCGCTGCTCTCTCTCTCCCGCGTGTTATCTCGCTCTCTTTCGCTTTCTGTTGTACATGTCTTTGCTGGGATTTTCCAAGTCACTTTCGAATGTGAAAACACTGGTTTTCACCATGTGCAAGATGTTATACGCCGCACTGATATTTCATTTCCACCATAATCATTTTTAATTTCTTCAGCATGATTTTCAACACGCCTATAGCTGGATTGAGGTTTGACAGTTCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAAATACACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATACAGGGTTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGAATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAACGCGTGTGTTGTTTCATTACTCATTTCTACCAATTGAATTTAAGGTGGTTTGAAAGGAGCAATGAAATACAATACAATTTTGAAAACATTGTAAAC---------AGATACGGCTTCAAACCGCTGTTTAAAAAAACGATGGCAATAGACCCATGAAGTGATGAAATTCATGCTGAAGAAATTAAAAATTATTTTGATAGAAATGATAGATCAGAGCGATGTGGAATAACATTTTGCACGTGTTGAAAAACAATGTTAAAATTTAAAAGTGACATGGAAAATGCTGCATCAGTCGCGCGAAAATCCAGTCCTATTTGGGCACAGACACCGCTCCCTGAAAAGCTCCTTCCTGTGTAGGATACCAACCACCTCCCACCATTGTTTCAGTCTCTATCTCTCTCTCTGTTCTATAAAAATAATAAAA]

[+] EMBL BX468982             [GCAAGAACTCGCCACGAGGTTTACATGGACTGCACCATCTCGTAAGATGGGGGTAGGCGGGCGATGCGTGGCGGCTGTTTTGTTTACTTTTTTTATATTTCCGTTCAGCTGTGTGTGTGTGTGTGTTTACTTAATCGAAGCGAGAAGGAGGAAGGGAAACAAAGGAAGATGCTTAATTGAACCCGGGGGACCTCTTCCTGTGTGCTCCGCTCTACCCAGCACACACACACACACGCACGCACGCAATCGCGTTGTNTATCATCGCGTCACCGATTAGTCGTAGGATTGTTGTTGTTTATGCTCTTCGAGTGGAGGGGGGGCAAACAGGGGATGATATAGATAGGAAGCAGGCTGTTGTTACAGTACACCCGCTCGGTAGGAATACTCTCTCTC GTCTCTAAGGGCAC GG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM581764             [                                                                                                                                                                                                                                                                                               ccgGTTGTTTATGCTCTTCGAGAGGAGGGGGGGCAAA GGGGGATGATATAGATAGGAAGCAGGCTGTTGTTACA TACACCCGCTCGGTAGGAATACTCTCTCTCTCTCTCTAAGGGCAC GGGAAGGAGGATGGCTCTGCGCTGGACAGTAAAGTTTGTTATAGGAAGCGATCTGATTTTTTGTTTATTTTACAAATTCTCCCCCGCCCCACCCAACACGAGGACGACAATTTATAGATTAGAAGCGTATACACTAAGCAATAGCTGTATCTCTCCCTCGCTGCTCTCTCTCTCCCGCGTGTTATCTCGCTCTCTTTCGCTTTCTGTTGTACATGTCTTTGCTGGGATTTTCCAAGTCACTTTCGAATGTGAAAACACTGGTTTTCACCATGTGCAAGATGTTATACGCCGCACTGATATTTCATTTCCACCATAATCATTTTTAATTTCTTCAGCATGATTTTCAACACGCCTATAGCTGGATTGAGGTTTGACAGTTCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAAATACACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AF348132             [                                                                                                                                                                                                                                                                                                                                      GGGGATGATATAGATAGGAAGCAGACTGTT TTACA TACACCC CTCGGTAGGAATACTCTCTCTC  TCTCTAAGGGCACGGGGAAGGAGGATGGCTCTGCGCTGGACAGTAAAGTTTGTTATAGca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX615334             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTCAACACGCCTATAGCTGGATTGATGTTTGACAGTTCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAAATACACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATACAGGGTTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGAATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAACGCGTGTGTTGTTTCATTACTCATTTCTACCAATTGAATTTAAGGTGGTTTGAAAGGAGCAATGAAATACAATACAATTTTGAAAACATTGTAAAC         AGATACGGCTTCAAACCGCTGTTTAAAAAAACGATGGCAATAGACCCATGAAGTGATGTAATTCATGCTGAAGAAGTTAAAGATTATTTTGATGGAGATGATAGATCAGAGCGATGTGGAATAACATTTT                                                                                                                                                                                             ]
[+] EMBL CNS09MHY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCACAAGCTGGGCTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGGATGTTTATGGTGATGCAAATGCAACGCGTAACAGCTGTTGAAAAACAGCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGAATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAACGCGTGTGTTGTTTCATTACTCATTTCTACCAATTGAATTTAAGGTGGGTTGAAATTTGCAATGAAATACAATACAATTTTGAAAACATTGTAAACATCTTGATGAGATACGGCTTCAAACCGCTGTTTAAAAAAACGATGGCAATAGACCCATGAAGTGTTGAAATTCATGCTGAAGAAATTAAAAATTATTTTGATAGAAATGATAGAGCAGAGCGATGTGGAATAACATTTTGCACGTGTTGAAAAACAATGTTAAAATTTAAAAGTGACATGGAAAATGCTGCATCAGTCGCGCGAAAATCCAGTCCTATTTGGGCACAGACACCGCTCCCTGAAAAGCTCCTTCCTGTGTAGGATACCAACCACCTCCCACCATTGTTTCAGTCTCTATCTCTCTCTCTGTTCTATAAAAATAATAAAA]
[+] EMBL BM611834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGAATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAACGCGTGTGTTGTTTCATTACTCATTTCTACCAATTGAATTTAAGGTGGTTTGAAAGGAGCAATGAAATACAATACAATTTTGAAAACATTGTAAAC         AGATACGGCTTCAAACCGCTGTTTAAAAAAACGATGGCAATAGACCCATGAAGTGATGAAATTCATGCTGAAGAAATTAAAAATTATTTTGATAGAAATGATAGATCAGAGCGATGTGGAATAACATTTTGCACGTGTTGAAAAACAATGTTAAAATTTAAAAGTGACGTGGAAAATGCTGCATCAGTCGCGCGAAAATCCAGTCC                                                                                                                 ]




>consensus_7873#0
GCAAGAACTCGCCACGAGGTTTACATGGACTGCACCATCTCGTAAGATGGGGGTAGGCGG
GCGATGCGTGGCGGCTGTTTTGTTTACTTTTTTTATATTTCCGTTCAGCTGTGTGTGTGT
GTGTGTTTACTTAATCGAAGCGAGAAGGAGGAAGGGAAACAAAGGAAGATGCTTAATTGA
ACCCGGGGGACCTCTTCCTGTGTGCTCCGCTCTACCCAGCACACACACACACACGCACGC
ACGCAATCGCGTTGTNTATCATCGCGTCACCGATTAGTCGTAGGATTGTTGTTGTTTATG
CTCTTCGAGTGGAGGGGGGGCAAACAGGGGATGATATAGATAGGAAGCAGGCTGTTGTTA
CATACACCCGCTCGGTAGGAATACTCTCTCTCGTCTCTAAGGGCACGGGAAGGAGGATGG
CTCTGCGCTGGACAGTAAAGTTTGTTATAGGAAGCGATCTGATTTTTTGTTTATTTTACA
AATTCTCCCCCGCCCCACCCAACACGAGGACGACAATTTATAGATTAGAAGCGTATACAC
TAAGCAATAGCTGTATCTCTCCCTCGCTGCTCTCTCTCTCCCGCGTGTTATCTCGCTCTC
TTTCGCTTTCTGTTGTACATGTCTTTGCTGGGATTTTCCAAGTCACTTTCGAATGTGAAA
ACACTGGTTTTCACCATGTGCAAGATGTTATACGCCGCACTGATATTTCATTTCCACCAT
AATCATTTTTAATTTCTTCAGCATGATTTTCAACACGCCTATAGCTGGATTGAGGTTTGA
CAGTTCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAA
ATACACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGAAA
ATGGCTTGCATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATACAGG
GTTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTT
TTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATG
ATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAA
ATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAA
AAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGAATGGCTTGGAAAACCCG
GTGGAAATTGACTTCAAACGCGTGTGTTGTTTCATTACTCATTTCTACCAATTGAATTTA
AGGTGGTTTGAAAGGAGCAATGAAATACAATACAATTTTGAAAACATTGTAAACAGATAC
GGCTTCAAACCGCTGTTTAAAAAAACGATGGCAATAGACCCATGAAGTGATGAAATTCAT
GCTGAAGAAATTAAAAATTATTTTGATAGAAATGATAGATCAGAGCGATGTGGAATAACA
TTTTGCACGTGTTGAAAAACAATGTTAAAATTTAAAAGTGACATGGAAAATGCTGCATCA
GTCGCGCGAAAATCCAGTCCTATTTGGGCACAGACACCGCTCCCTGAAAAGCTCCTTCCT
GTGTAGGATACCAACCACCTCCCACCATTGTTTCAGTCTCTATCTCTCTCTCTGTTCTAT
AAAAATAATAAAA

consensusID : consensus_7873#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 858
fasta sequence

                              [AATCGCCCGAGGNTTGGACAGCTGTTGAAAAACATCTTGGTGAATATTATGTGCAAATTAGAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATACAGGGGTTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGACATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAACGCGTGTGTGTTTCATTACTCATTTCTACCAATTGAATTTAAAGGGTGGTTTGAAAAGGAGCAATGAAATACAATAACAATTTGAANAACCATTCGGTAAACAGCANTACGGCTTCAAACCCCGCTGTTNTAAAAAAACCGGAATGGGCGAAATAAGAACCCCCATGCAAGGGTGANAGGAAANTTCATGGCTGGACAGCAACATTCCACAACNTTNATCTGGNCTCACAACAGATGTANGAATCCAAGAGCGACTGTGTNACATACATCTGGCACANGTGTTTGACAAACACCAAGGTCAACACTTCAAAAAGGGCACGTGGGACAACAGGCGGCATCAGAGCGNCCGAAAACCGAGACCNATTAGGGGACNAACACCGGCCCGAANACACNNTCGGGGTGAGGANACCACAC]

[+] EMBL AL932328             [AATCGCCCGAGGNTTGGACAGCTGTTGAAAAACATCTTGGTGAATATTATGTGCAAATTAGAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATACAGGGGTTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGACATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAACGCGTGTGTGTTTCATTACTCATTTCTACCAATTGAATTTAAAGGGTGGTTTGAAAAGGAGCAATGAAATACAATAACAATTTGAANAACCATTCGGTAAACAGCANTACGGCTTCAAACCCCGCTGTTNTAAAAAAACCGGAATGGGCGAAATAAGAACCCCCATGCAAGGGTGANAGGAAANTTCATGGCTGGACAGCAACATTCCACAACNTTNATCTGGNCTCACAACAGATGTANGAATCCAAGAGCGACTGTGTNACATACATCTGGCACANGTGTTTGACAAACACCAAGGTCAACACTTCAAAAAGGGCACGTGGGACAACAGGCGGCATCAGAGCGNCCGAAAACCGAGACCNATTAGGGGACNAACACCGGCCCGAANACACNNTCGGGGTGAGGANACCACAC]




>consensus_7873#1
AATCGCCCGAGGNTTGGACAGCTGTTGAAAAACATCTTGGTGAATATTATGTGCAAATTA
GAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATA
CAGGGGTTTTTGCTGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAG
ATGTTTTTCGGCAGATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTC
GCATGATTTTCAAAACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGT
TGCAAATCATTTGGAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTG
TTGAAAAACATCTTGCAAGCGATGAATAAATGCTGTGCACATAAGCGACATGGCTTGGAA
AACCCGGTGGAAATTGACTTCAAACGCGTGTGTGTTTCATTACTCATTTCTACCAATTGA
ATTTAAAGGGTGGTTTGAAAAGGAGCAATGAAATACAATAACAATTTGAANAACCATTCG
GTAAACAGCANTACGGCTTCAAACCCCGCTGTTNTAAAAAAACCGGAATGGGCGAAATAA
GAACCCCCATGCAAGGGTGANAGGAAANTTCATGGCTGGACAGCAACATTCCACAACNTT
NATCTGGNCTCACAACAGATGTANGAATCCAAGAGCGACTGTGTNACATACATCTGGCAC
ANGTGTTTGACAAACACCAAGGTCAACACTTCAAAAAGGGCACGTGGGACAACAGGCGGC
ATCAGAGCGNCCGAAAACCGAGACCNATTAGGGGACNAACACCGGCCCGAANACACNNTC
GGGGTGAGGANACCACAC

consensusID : consensus_7873#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 733
fasta sequence

                              [TTGTTATCATCGCTTCCCGTATTAGTCNTATTGTTGTTTTTTATGCTCTTCGAGAGGTATGGGGGGCAAAGGGGGTATGATATAGATAGTAANCAGNCTGTTGTTACATACACCCGCTCGGTAGGAATACTCTCTCTCTCTCTCTAAGGGTCACGGGAAGGAGGATGGCTCTGCGCTGGACAGTAAAGTTTGTTATAGGAAGCGATCTGATTTTTTGTTTATNTTTACAAATTCTCCCCCGCCCCACCCAACACGAGGACGTACAATTTATAGATTAGANAGCGTATACAGCTAAGCAATAGCTGTATCTCTCCCTCGCTGCTCTCTCTCTCCCGCGTGTTATCTCGCTCTCTTTCGCTTTCTGTTGTACATGTCTTTGCTGGGATTTTCCAAGTCACTTTCGAATGTGAAACACTGGTTTTCACCATGTGCAAGATGTTATACGCCGCACTGATATTTCATGTNCCACCATAATCATTTGGTAANTTGCGTGTCAGCATGATTTTCAACACGCCTATAGCTGGATTGAGGTTTGACAGTTCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAAATACACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAACAGTCACTAAAACCAAAAAAAAATAACNTCGGGGCGATTCTT]

[-] EMBL AL693179             [TTGTTATCATCGCTTCCCGTATTAGTCNTATTGTTGTTTTTTATGCTCTTCGAGAGGTATGGGGGGCAAAGGGGGTATGATATAGATAGTAANCAGNCTGTTGTTACATACACCCGCTCGGTAGGAATACTCTCTCTCTCTCTCTAAGGGTCACGGGAAGGAGGATGGCTCTGCGCTGGACAGTAAAGTTTGTTATAGGAAGCGATCTGATTTTTTGTTTATNTTTACAAATTCTCCCCCGCCCCACCCAACACGAGGACGTACAATTTATAGATTAGANAGCGTATACAGCTAAGCAATAGCTGTATCTCTCCCTCGCTGCTCTCTCTCTCCCGCGTGTTATCTCGCTCTCTTTCGCTTTCTGTTGTACATGTCTTTGCTGGGATTTTCCAAGTCACTTTCGAATGTGAAACACTGGTTTTCACCATGTGCAAGATGTTATACGCCGCACTGATATTTCATGTNCCACCATAATCATTTGGTAANTTGCGTGTCAGCATGATTTTCAACACGCCTATAGCTGGATTGAGGTTTGACAGTTCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAAATACACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGAAAATGGCTTGCATCAGTTTACATTAATTAAAAATAAACAGTCACTAAAACCAAAAAAAAATAACNTCGGGGCGATTCTT]




>consensus_7873#2
TTGTTATCATCGCTTCCCGTATTAGTCNTATTGTTGTTTTTTATGCTCTTCGAGAGGTAT
GGGGGGCAAAGGGGGTATGATATAGATAGTAANCAGNCTGTTGTTACATACACCCGCTCG
GTAGGAATACTCTCTCTCTCTCTCTAAGGGTCACGGGAAGGAGGATGGCTCTGCGCTGGA
CAGTAAAGTTTGTTATAGGAAGCGATCTGATTTTTTGTTTATNTTTACAAATTCTCCCCC
GCCCCACCCAACACGAGGACGTACAATTTATAGATTAGANAGCGTATACAGCTAAGCAAT
AGCTGTATCTCTCCCTCGCTGCTCTCTCTCTCCCGCGTGTTATCTCGCTCTCTTTCGCTT
TCTGTTGTACATGTCTTTGCTGGGATTTTCCAAGTCACTTTCGAATGTGAAACACTGGTT
TTCACCATGTGCAAGATGTTATACGCCGCACTGATATTTCATGTNCCACCATAATCATTT
GGTAANTTGCGTGTCAGCATGATTTTCAACACGCCTATAGCTGGATTGAGGTTTGACAGT
TCTTTGTGATGTGTTTGAAAATCGTGTGTTAAATCTGAAATTTCATCATGAAGCAAATAC
ACCATTGGACAGCTGTTGAAAAACATCTTGGTGAATAATTATGTGCAAATTAGAAAATGG
CTTGCATCAGTTTACATTAATTAAAAATAAACAGTCACTAAAACCAAAAAAAAATAACNT
CGGGGCGATTCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7873#0      GCAAGAACTCGCCACGAGGTTTACATGGACTGCACCATCTCGTAAGATGGGGGTAGGCGG 60
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      GCGATGCGTGGCGGCTGTTTTGTTTACTTTTTTTATATTTCCGTTCAGCTGTGTGTGTGT 120
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      GTGTGTTTACTTAATCGAAGCGAGAAGGAGGAAGGGAAACAAAGGAAGATGCTTAATTGA 180
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      ACCCGGGGGACCTCTTCCTGTGTGCTCCGCTCTACCCAGCACACACACACACACGCACGC 240
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      -----------------------------------------------AATCGCCCGAGGN 13
                                                                                  

consensus_7873#0      ACGCAATCGCGTTGTNTATCATCGCGTCACCGATTAGTCGTAGGATTGTTGTTG-TTTAT 299
consensus_7873#2      -----------TTGTT-ATCATCGCTTCCCGTATTAGTCNTA---TTGTTGTTT-TTTAT 44
consensus_7873#1      TTGGACAGCTGTTGAAAAACATCTTGGTGAATATTATGTGCAAATTAGAAAATGGCTTGC 73
                                 ***   * ****         ****     *   * *    *   **  

consensus_7873#0      GCTCTTCGAGTGG-AGGGGGGGCAAACAGGGGATGATATAGATAGGAAGCAGGCTGTTGT 358
consensus_7873#2      GCTCTTCGAGAGGTATGGGGGGCAAAGGGGGTATGATATAGATAGTAANCAGNCTGTTGT 104
consensus_7873#1      ATCAGTTTACATTAATTAAAAATAAAACAGTCACTAAAACCAAAATACAGGGGTTTTTGC 133
                           *  *     *        ***   *  *  * *   * *  *    *  * *** 

consensus_7873#0      TACATACACCCGCTCGGT-AGGAATACTCTCTCTCG-TCTCTAAGGG-CACGGGAAGGAG 415
consensus_7873#2      TACATACACCCGCTCGGT-AGGAATACTCTCTCTCTCTCTCTAAGGGTCACGGGAAGGAG 163
consensus_7873#1      TGCATCAATTTCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCA 193
                      * ***  *    *   ** *  ** *     * **  *   *  * *         **  

consensus_7873#0      GATGGCT----CTGCGCTGG-ACAGTAAAGTTTGTTATAG-GAAGCGATCTGATTTTTTG 469
consensus_7873#2      GATGGCT----CTGCGCTGG-ACAGTAAAGTTTGTTATAG-GAAGCGATCTGATTTTTTG 217
consensus_7873#1      GATGGCAAATGTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAA 253
                      ******      ***  * * *    ***  ** **  ** *        *******   

consensus_7873#0      TTTATTTT-ACAAATTCTCCCCCGCCCCAC---CCAACACGAGGACG-ACAATTTAT--- 521
consensus_7873#2      TTTATNTTTACAAATTCTCCCCCGCCCCAC---CCAACACGAGGACGTACAATTTAT--- 271
consensus_7873#1      AACACAATCACAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTG 313
                         *   * ****  *   *   *    **    *     *  *     *** * **   

consensus_7873#0      ---AGATTAGAA-------GCG-TATACA-CTAA---GCAATAGCTGT--------ATCT 558
consensus_7873#2      ---AGATTAGANA------GCG-TATACAGCTAA---GCAATAGCTGT--------ATCT 310
consensus_7873#1      GAAGAATTGGATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCT 373
                           *** **        * * *  * *  ***   * ** ******        ****

consensus_7873#0      CTCCCTCGCTGC-----TCTCTCTCTCCCGCGTGTTAT-----------CTCGCTCTCTT 602
consensus_7873#2      CTCCCTCGCTGC-----TCTCTCTCTCCCGCGTGTTAT-----------CTCGCTCTCTT 354
consensus_7873#1      TGCAAGCGATGAATAAATGCTGTGCACATAAGCGACATGGCTTGGAAAACCCGGTGGAAA 433
                        *   ** **      *      * *    * *  **           * ** *     

consensus_7873#0      TCGCTTTCTGTTGTACATGTCTTT----GCTGGGATTTTCCAAGTCACTTTCGAATGTGA 658
consensus_7873#2      TCGCTTTCTGTTGTACATGTCTTT----GCTGGGATTTTCCAAGTCACTTTCGAATGTGA 410
consensus_7873#1      TTGACTTCAAACGCGTGTGTGTTTCATTACTCATTTCTACCAATTGAATTTAAAGGGTGG 493
                      * *  ***    *    *** ***     **    * * **** * * ***  *  *** 

consensus_7873#0      ---------AAACACTGGTTTTCA----CCATGTGCAAGATGTT---ATACGCCGCACTG 702
consensus_7873#2      ---------AA-CACTGGTTTTCA----CCATGTGCAAGATGTT---ATACGCCGCACTG 453
consensus_7873#1      TTTGAAAAGGAGCAATGAAATACAATAACAATTTGAANAACCATTCGGTAAACAGCANTA 553
                                * ** **   * **    * ** ** *  *   *    **  * *** * 

consensus_7873#0      ATATTTCAT-TTCCACCATAATCATTTT--TAATTTCT---TCAGCATGATTTTCA-ACA 755
consensus_7873#2      ATATTTCATGTNCCACCATAATCATTTGG-TAANTTGCGTGTCAGCATGATTTTCA-ACA 511
consensus_7873#1      CGGCTTCAAACCCCGCTGTTNTAAAAAAACCGGAATGGGCGAAATAAGAACCCCCATGCA 613
                          ****    ** *  *  * *           *       *  *  *    **  **

consensus_7873#0      CGCCT-ATAGCTGGATTGA-GGTTTGACAGTTCTTTGTGATGTGTTTGAA--AATCGTGT 811
consensus_7873#2      CGCCT-ATAGCTGGATTGA-GGTTTGACAGTTCTTTGTGATGTGTTTGAA--AATCGTGT 567
consensus_7873#1      AGGGTGANAGGAAANTTCATGGCTGGACAGCAACATTCCACAACNTTNATCTGGNCTCAC 673
                       *  * * **     ** * ** * *****     *   *     ** *      *    

consensus_7873#0      GTTAAATCTGAAATTTCATCA-----TGAAGCAAATACACCATTGGACAGCTGTT-GAAA 865
consensus_7873#2      GTTAAATCTGAAATTTCATCA-----TGAAGCAAATACACCATTGGACAGCTGTT-GAAA 621
consensus_7873#1      AACAGATGTANGAATCCAAGAGCGACTGTGTNACATACATC-TGGCACANGTGTTTGACA 732
                         * ** *   * * **  *     **    * ***** * * * ***  **** ** *

consensus_7873#0      AACATCTTGGTGAATAATT----ATGTGCAAATTAGAAAATGGCTTGCATCAG--TTTAC 919
consensus_7873#2      AACATCTTGGTGAATAATT----ATGTGCAAATTAGAAAATGGCTTGCATCAG--TTTAC 675
consensus_7873#1      AACACCAAGGTCAACACTTCAAAAAGGGCACGTGGGACAACAGGCGGCATCAGAGCGNCC 792
                      **** *  *** ** * **    * * ***  *  ** **  *   *******      *

consensus_7873#0      ATTAATTAAAAATAAAACAGTCACTAAAACCAAAA-TACAGGGTTTTTGCTGCATCAATT 978
consensus_7873#2      ATTAATTAAAAATAAA-CAGTCACTAAAACCAAAA-AAAAATAACNTCGGGGCGATTCTT 733
consensus_7873#1      GAAAACCGAGACCNATTAGGGGACNAACACCGGCCCGAANACACNNTCGGGGTGAGGANA 852
                         **   * *   *    *  ** ** ***      *        * *  *        

consensus_7873#0      TCCAATGTCAACAACAGCTGTTTTCATTGCTTGCGAGATGTTTTTCGGCAGATGGCAAAT 1038
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      CCACAC------------------------------------------------------ 858
                                                                                  

consensus_7873#0      GTTGCATTTGCATCACAAAACTTTTTTCAGTGCTTTCGCATGATTTTCAAAACACAATCA 1098
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      CAAGCTGGACTGAGTTTGACAGCTCGTTGTGGTGGGTTGCAAATCATTTGGAAGAATTGG 1158
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      ATTTTTATGGTGATGCAAATGTAACGCGTAACAGCTGTTGAAAAACATCTTGCAAGCGAT 1218
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      GAATAAATGCTGTGCACATAAGCGAATGGCTTGGAAAACCCGGTGGAAATTGACTTCAAA 1278
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      CGCGTGTGTTGTTTCATTACTCATTTCTACCAATTGAATTTAAGGTGGTTTGAAAGGAGC 1338
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      AATGAAATACAATACAATTTTGAAAACATTGTAAACAGATACGGCTTCAAACCGCTGTTT 1398
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      AAAAAAACGATGGCAATAGACCCATGAAGTGATGAAATTCATGCTGAAGAAATTAAAAAT 1458
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      TATTTTGATAGAAATGATAGATCAGAGCGATGTGGAATAACATTTTGCACGTGTTGAAAA 1518
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      ACAATGTTAAAATTTAAAAGTGACATGGAAAATGCTGCATCAGTCGCGCGAAAATCCAGT 1578
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      CCTATTTGGGCACAGACACCGCTCCCTGAAAAGCTCCTTCCTGTGTAGGATACCAACCAC 1638
consensus_7873#2      ------------------------------------------------------------
consensus_7873#1      ------------------------------------------------------------
                                                                                  

consensus_7873#0      CTCCCACCATTGTTTCAGTCTCTATCTCTCTCTCTGTTCTATAAAAATAATAAAA 1693
consensus_7873#2      -------------------------------------------------------
consensus_7873#1      -------------------------------------------------------