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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7887#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 911 fasta sequence
[TGCTAGCTCGCAAATCATCTAATCAATTTTCTACCCAATAATCAATGAAAGTTGTCGAAATTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGG-AAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTG-CATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAACTGTTTGTGTTTTGCTACGGGAAGCTGTATCGCTGTAGTTGGATTAAATATCGTGCCCGACCACCTTCCTCCCCACT-CCCCTGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGGCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCG-AAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGT-CCGTGGTGGTGGGCGAATTCATCTACTCCTTCGGTGGGTACTGCACCGGGGAGGACTACCATTCGAACAGCGCAATCGACGTGCACGTGCTGAACACGCACAACATGCGCTGGGCCCCGATCCCGGCGGTGGAGGACGAGAACGGGGTGCCGTGCAAGTACCCGGAGGTGCCGTTCCAGCGGTACGGCCACACGGCCGTCGCCTTCGAGCACAAGATATACCTGTGGGGCGGGCGTATCGAAGCAGAAGAGTATGTCACAAACAACTCAAAAAAAA]
[+] EMBL CNS08V63 [TGCTAGCTCGCAAATCATCTAATCAATTTTCTACCCAATAATCAATGAAAGTAGTCGAAATTGTGAAA ACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGG AAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTG CATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAACTGTTTGTGTTTTGCTACGGGAAGCTGTATCGCTGTAGTTGGATTAAATATCGTGCCCGACCACCTTCCTCCCCACT CCCCTGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGGCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCT TTAAATACACAAAACCCTCCCCG ]
[+] EMBL BM597871 [ ccGCTCGCAAATCATCTAATCAATTTTCTACCCAATAATCAATGAAAGTTGTCGAAATTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCCTTTTGGACCCTCCTCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGGAAAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTGCCATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAATTGTTTGTGTTTTGCTGCGGGAAGCTGCATCGCTGTAGTTGGATTAAATATCGTGCCCAACCACCTTCCTCCCCACTCCCCCGGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGCCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCG AAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGT CCGTGGTGATGGGCGAATTCATCTACTCCTTCGGTGGGTACTGCACCGGGGAGGACTACCATTCGAACAG ]
[+] EMBL AGA285039 [ TCTAATCAATTTTCTACCCAATAATCAATGAAAGTTGTCGAAATTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGG AAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTGCCATCGCGATCGTCTTTCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAATTGTTTGTGTTTTGCTGCGGGAAGCTGCATCGCTGTAGTTGGATTAAATA ]
[+] EMBL BM622086 [ ccgCGAAATTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCCTTTTGGACCCTCCTCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGGAAAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTGCCATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAATTGTTTGTGTTTTGCTGCGGGAAGCTGCATCGCTGTAGTTGGATTAAATATCGTGCCCAACCACCTTCCTCCCCACTCCCCCGGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGCCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCGAAAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGT CCGTGGTGATGGGCGAATTCATCTACTCCTTCGGTGGGTACTGCACCGGGGAGGACTACCATTCGAACAGCGCAA ]
[+] EMBL BM631167 [ ccgCGAAATTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTCGTCCGCCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGG AAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTG CATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAACTGTTTGTGTTTTGCTACGGGAAGCTGTATCGCTGTAGTTGGATTAAATATCGTGCCCGACCACCTTCCTCCCCACT CCCCTGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGGCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCG AAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGT CCGTGGTGGTGGGCGAATTCATCTACTCCTTCGGTGGATACTGCACCGGGGAGGACTACCATTCGAACAGCGCCATCGACGTGC ]
[+] EMBL BM593718 [ CCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACCCGAGTGTGCGTATTCAGCGG AAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAACAAGGCAAATTAGGAAACCACGTATTG CATCGCGATCGTCTTCCTGTCATCCTGTCCTACCTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAACTGTTTGTGTTTTGCTACGGGAAGCTGTATCGCTGTAGTTGGATTAAATATCGTGCCCGACCACCTTCCTCCCCACT CCCCTGGGGGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGGCTGTGTGTTGTGTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCG AAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGTCCCGTGGTGGTGGGCGAATTCATCTACTCCTTCGGTGGATACTGCACCGGGGAGGACTACCATTCGAACAGCGCCATCGACGTGCACGTGCTGAACACGCACAACATGCGCTGGG ]
[-] EMBL AGA283749 [ GTTCGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCG AAAAATACACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGGGTCGTCAATCTGGACGGTGGGCCGCGGCGCGTCAACCATGCGT CCGTGGTGGTGGGCGAATTCATCTACTCCTTCGGTGGGTACTGCACCGGGGAGGACTACCATTCGAACAGCGCAATCGACGTGCACGTGCTGAACACGCACAACATGCGCTGGGCCCCGATCCCGGCGGTGGAGGACGAGAACGGGGTGCCGTGCAAGTACCCGGAGGTGCCGTTCCAGCGGTACGGCCACACGGCCGTCGCCTTCGAGCACAAGATATACCTGTGGGGCGGGCGTATCGAAGCAGAAGAGTATGTCACAAACAACTCAAAAAAAA]
consensusID : consensus_7887#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 378 fasta sequence
[AGAATTGCCCCGAGGTTTGTGAGCAAATTGAGAGCTAATCAAAAAATCGAAAAATACACAAAACCCTTCCCGTCCCCCCCGATCGTCCGGACCGCCATCATGCACTGGTGTCGTCAATCTGGACGTGTGGGCCTGCTGGCTGCGTCAACCATGCGTCTGTGGTGGTGGGCTGAATTCATCTACTCCTTCGGTGGATACTGCACCGGGGATGGACTACCATTCGAACAGCGCCATCGACGTGCACGTGCTGAACACGCACAACATGCGCTGGGCCCCGATCCCGGCGGTGGAGGACGAGAACGGGGTGCCGTGCAAGTACCCGGAGGTGCCGTTCCAGCTGGTACGGCCACACGGCCTGTCGCCTTCGAGCACAAGATA]
[+] EMBL AL930289 [AGAATTGCCCCGAGGTTTGTGAGCAAATTGAGAGCTAATCAAAAAATCGAAAAATACACAAAACCCTTCCCGTCCCCCCCGATCGTCCGGACCGCCATCATGCACTGGTGTCGTCAATCTGGACGTGTGGGCCTGCTGGCTGCGTCAACCATGCGTCTGTGGTGGTGGGCTGAATTCATCTACTCCTTCGGTGGATACTGCACCGGGGATGGACTACCATTCGAACAGCGCCATCGACGTGCACGTGCTGAACACGCACAACATGCGCTGGGCCCCGATCCCGGCGGTGGAGGACGAGAACGGGGTGCCGTGCAAGTACCCGGAGGTGCCGTTCCAGCTGGTACGGCCACACGGCCTGTCGCCTTCGAGCACAAGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7887#0 TGCTAGCTCGCAAATCATCTAATCAATTTTCTACCCAATAATCAATGAAAGTTGTCGAAA 60
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 TTGTGAAACACACCGTGCTGTTCACGCCCAGCAGTAAACGCTGAAGCTGCTTTCGGTTTC 120
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 GTCCGCCGTACGGCCCAAGGACGGGGCCCCGTTTCGGACCCTCCCCCGTGTGTGTGCACC 180
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 CGAGTGTGCGTATTCAGCGGAAGGAAGGAAGAAGAAGGAGCAAAATCTGCAAATGCAAAA 240
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 CAAGGCAAATTAGGAAACCACGTATTGCATCGCGATCGTCTTCCTGTCATCCTGTCCTAC 300
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 CTTGGAAGGAGGAATCGTGTGTGGCAGTGTGAAAACTGTTTGTGTTTTGCTACGGGAAGC 360
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 TGTATCGCTGTAGTTGGATTAAATATCGTGCCCGACCACCTTCCTCCCCACTCCCCTGGG 420
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 GGTGACGGTCTCATGGTTTGCATAATATGAACGCAATGTGTGGTGGCTGTGTGTTGTGTT 480
consensus_7887#1 ------------------------------------------------------------
consensus_7887#0 CGTGCATGGCGTGCAGTTGCTGTGAGCAAAATTGAGAGCTAATCAAAACATCGAAAAATA 540
consensus_7887#1 --AGAATTGCCCCGAGGT-TTGTGAGCAAA-TTGAGAGCTAATCAAAAAATCGAAAAATA 56
* ** ** ** * ********** ***************** ***********
consensus_7887#0 CACAAAACCCTCCCCGTCCCCCCCGATCGTCCGGACCTCCATCATGCACTGG-GTCGTCA 599
consensus_7887#1 CACAAAACCCTTCCCGTCCCCCCCGATCGTCCGGACCGCCATCATGCACTGGTGTCGTCA 116
*********** ************************* ************** *******
consensus_7887#0 ATCTGGACG-GTGGGCC-GCGG--CGCGTCAACCATGCGTCCGTGGTGGTGGGC-GAATT 654
consensus_7887#1 ATCTGGACGTGTGGGCCTGCTGGCTGCGTCAACCATGCGTCTGTGGTGGTGGGCTGAATT 176
********* ******* ** * **************** ************ *****
consensus_7887#0 CATCTACTCCTTCGGTGGGTACTGCACCGGGGA-GGACTACCATTCGAACAGCGCAATCG 713
consensus_7887#1 CATCTACTCCTTCGGTGGATACTGCACCGGGGATGGACTACCATTCGAACAGCGCCATCG 236
****************** ************** ********************* ****
consensus_7887#0 ACGTGCACGTGCTGAACACGCACAACATGCGCTGGGCCCCGATCCCGGCGGTGGAGGACG 773
consensus_7887#1 ACGTGCACGTGCTGAACACGCACAACATGCGCTGGGCCCCGATCCCGGCGGTGGAGGACG 296
************************************************************
consensus_7887#0 AGAACGGGGTGCCGTGCAAGTACCCGGAGGTGCCGTTCCAGC-GGTACGGCCACACGGCC 832
consensus_7887#1 AGAACGGGGTGCCGTGCAAGTACCCGGAGGTGCCGTTCCAGCTGGTACGGCCACACGGCC 356
****************************************** *****************
consensus_7887#0 -GTCGCCTTCGAGCACAAGATATACCTGTGGGGCGGGCGTATCGAAGCAGAAGAGTATGT 891
consensus_7887#1 TGTCGCCTTCGAGCACAAGATA-------------------------------------- 378
*********************
consensus_7887#0 CACAAACAACTCAAAAAAAA 911
consensus_7887#1 --------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||