cluster # 7897

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Anopheles gambiae
cluster # 7897 cluster # 7897 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7897#0 length = 686 sequences # 2
consensus_7897#1 length = 639 sequences # 4

consensus_7897#2 length = 232 sequences # 1
consensus_7897#3 length = 214 sequences # 1

consensusID : consensus_7897#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 686
fasta sequence

                              [GATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTAAGAGAATAAGGTCATCAAGGAGAACAATCCGATGAACGGTTGAATTGAATTTGATTGATCTCGTTCATCCGTGTTTTTTTTTCTTTGTAGGTTGCAAACCCCGATCCCGACGAACAAGGCCGGACGCGCGAATCCTCTCCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACCGGGCCAGCAGCTCACGATCATGTTGTCCGCCAGCAAGGTCGCGCACTTTGAGGATCTGCTCGCGCTACACGCAGTGAGCGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAGCCAGATGGACTGGGACCACTACTTTCAGCTCGAGACGATATACGCCTGGATGGAGCTGCTGGCGGAACGCTTCCCGGGCGCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGGCGCCCGATCAGGGGAGTGAAGCTGTCGCGCCGTCCCGGCAACAAAGC]

[+] EMBL BX610398             [GATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTAAGAGAATAAGGTCATCAAGGAGAACAATCCGATGAACGGTTGAATTGAATTTGATTGATCTCGTTCATCCGTGTTTTTTTTTCTTTGTAGGTTGCAAACCCCGATCCCGACGAACAAGGCCGGACGCGCGAATCCTCTCCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACCGGGCCAGCAGCTCACGATCATGTTGTCCGCCAGCAAGGTCGCGCACTTTGAGGATCTGCTCGCGCTACACGCAGTGAGCGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAGCCAGATGGACTGGGACCACTACTTTCAGCTCGAGACGATATACGCCTGGATGGAGCTGCTGGCGGAACGCTTCCCGGGCGCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGGCGCCCGATCAGGGGAGTGAAGCTGTCGCGCCGTCCCGGCAACAAAGC]
[+] EMBL BX620917             [                                                                                                                                                                                                 CCTCAGTCGCAGGTAAGATGNCTGGTGCTGCCGCCGNGGATGGAGGCGCCCGGTACGACCATTACCGGNTGTACCGTGTCGAGCTGGCGACNGACGAGC                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_7897#0
GATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTAAGAGA
ATAAGGTCATCAAGGAGAACAATCCGATGAACGGTTGAATTGAATTTGATTGATCTCGTT
CATCCGTGTTTTTTTTTCTTTGTAGGTTGCAAACCCCGATCCCGACGAACAAGGCCGGAC
GCGCGAATCCTCTCCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGTGGATGGAGCC
GCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAG
CTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAA
CCGGGCCAGCAGCTCACGATCATGTTGTCCGCCAGCAAGGTCGCGCACTTTGAGGATCTG
CTCGCGCTACACGCAGTGAGCGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAG
CGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAGCCAGATGGACTGGGACCAC
TACTTTCAGCTCGAGACGATATACGCCTGGATGGAGCTGCTGGCGGAACGCTTCCCGGGC
GCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGGCGCCCGATCAGGGGAGTGAAG
CTGTCGCGCCGTCCCGGCAACAAAGC

consensusID : consensus_7897#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 639
fasta sequence

                              [CCGGTCTCTTGGTATTTCGACACTGCAAATGGAGATTGTCTTACAGGTCTGGTGGTGATTCCTTTTTTTTAATATAAGACAAACGTACAGAGAGATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTTGCAAACCCCGATCCCAACGAACAAGGCCGGACGCGCGAATCCTCTGCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGCGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTCGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACCGGGCCAGCAGCT-CACGATCATGGTGTCCGCCAGCAAGGTCGCGGACTTTGAGGATCTGCTCGCGCTACACGCAGTGAG-CGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAACCAGATGGACTGGGAGCACTACTTTCAGCTCGAGACGATTTACGCCTGGATGGAGCTGCTGGCGGAACGCTTTCCGGGCGCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGG]

[+] EMBL BM621710             [CCGGTCTCTTGGTATTTCGACACTGCAAATGGAGATTGTCTTACAGGTCTGGTGGTGATTCCTTTTTTTTAATATAAGACAAACGTACAGAGAGATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTTGCAAACCCCGATCCCAACGAACAAGGCCGGACGCGCGAATCCTCTGCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGCGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTCGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACCGGGCCAGCAGCT CACGATCATGGTGTCCGCCAGCAAGGTCGCGGACTTTGAGGATCTGCTCGCGCTACACGCAGTGAG CGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAACCAGATGGACTGGGAGCACTACTTTCAGCTCGAGACGATTTACGCCTGGATGGAGCTGCTGGCGGAA                                                   ]
[+] EMBL BM638567             [                                  ccgGTCTTACAGGTCTGGTGGTGATTCCTTTTTTTTAATATAAGACAAACGTACAGAGAGATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTTGCAAACCCCGATCCCAACGAACAAGGCCGGACGCGCGAATCCTCTGCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGCGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTCGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACCGGGCCAGCAGCT CACGATCATGGTGTCCGCCAGCAAGGTCGCGGACTTTGAGGATCTGCTCGCGCTACACGCAGTGAG CGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAACCAGATGGACTGGGAGCACTACTTTCAGCTCGAGACGATTTACGCCTGGATGGAGCTGCTGGCGGAACGCTTTCCGGGCGCGGT                                  ]
[+] EMBL BX623708             [                                                                                                          TCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTTGCAAACCCCGATCCCGACGAACAAGGCCGGACGCGCGAATCCTCTCCTCAGTCGCAGGNAAGATGTCTGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACNGGGCCAGCAGCT CACGATNATGGTGTCCGCCAGCNAGGTCGCGGACTTTGAGGATCTGCTCGCGCTACACGCAGTGAG CGGGCGCGTGCTCGAGCGCAACATGCAGCANCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAGCCANATGGACTGGGACCACTACTTTCAGCTCGAGACGATATACGCCTGGATGGAGCTGCTGGCGGAACGCTTCCCGGGCGCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGG]
[+] EMBL CNS096A3             [                                                                                                                                               CGGTTGCAAA CCCGATCCCAACGAACAAGGCCGGACGCGCGAATCCTCTGCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGCGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAGCTGTTCCAGCAGCTCGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAACCGGGCCAGCAGCTCCACGATCATGGTGTCCGCCAGCAAGGTCGCGGACTTTGAGGATCTGCTCGCGCTACACGCAGTAAGCCGGGCGCGTGC                                                                                                                                                                                            ]




>consensus_7897#1
CCGGTCTCTTGGTATTTCGACACTGCAAATGGAGATTGTCTTACAGGTCTGGTGGTGATT
CCTTTTTTTTAATATAAGACAAACGTACAGAGAGATAAGATAGCTTTCATGACGGTGCGT
GTCCATCAACATCCATAGAGACACGGTTGCAAACCCCGATCCCAACGAACAAGGCCGGAC
GCGCGAATCCTCTGCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGCGGATGGAGCC
GCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTGCAG
CTGTTCCAGCAGCTCGAGGCGAAGAGCGACAGCTGCACCTTTTACGGCCATGCGCGGCAA
CCGGGCCAGCAGCTCACGATCATGGTGTCCGCCAGCAAGGTCGCGGACTTTGAGGATCTG
CTCGCGCTACACGCAGTGAGCGGGCGCGTGCTCGAGCGCAACATGCAGCAGCTGATCGAG
CGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAACCAGATGGACTGGGAGCAC
TACTTTCAGCTCGAGACGATTTACGCCTGGATGGAGCTGCTGGCGGAACGCTTTCCGGGC
GCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGG

consensusID : consensus_7897#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 232
fasta sequence

                              [NAGACCAGAAATCGGCACGAGGNGTTTATACTCACTGTTTCGCCGCTTATCNCCAAGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTTCAGCTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGTGNACCGTTTACTGGCCAATGCTGCGGNAANCCGGGTNCAGGCAGCTCACGAGTCAA]

[+] EMBL BX469496             [NAGACCAGAAATCGGCACGAGGNGTTTATACTCACTGTTTCGCCGCTTATCNCCAAGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGGCGACGGACGAGCAGGTTCAGCTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGTGNACCGTTTACTGGCCAATGCTGCGGNAANCCGGGTNCAGGCAGCTCACGAGTCAA]




>consensus_7897#2
NAGACCAGAAATCGGCACGAGGNGTTTATACTCACTGTTTCGCCGCTTATCNCCAAGGTG
CTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCGTGTCGAGCTGG
CGACGGACGAGCAGGTTCAGCTGTTCCAGCAGCTTGAGGCGAAGAGCGACAGCTGTGNAC
CGTTTACTGGCCAATGCTGCGGNAANCCGGGTNCAGGCAGCTCACGAGTCAA

consensusID : consensus_7897#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 214
fasta sequence

                              [GGTTAAAAAAACAAGAATTTCCTTCAAGCCGTGCTGTTTACACTAATACCTCCACTGGTTTCGCCGCTTTTCCAAGGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCCGGTGTCCGAGCTGGCGACGGACGAGCAGGTGCAGCCTGGTTCCAGCAGCTTGGAGGCGAAGAGCGACAGCTGGCCACCTTTTACG]

[+] EMBL AL934530             [GGTTAAAAAAACAAGAATTTCCTTCAAGCCGTGCTGTTTACACTAATACCTCCACTGGTTTCGCCGCTTTTCCAAGGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCGGCTGTACCCGGTGTCCGAGCTGGCGACGGACGAGCAGGTGCAGCCTGGTTCCAGCAGCTTGGAGGCGAAGAGCGACAGCTGGCCACCTTTTACG]




>consensus_7897#3
GGTTAAAAAAACAAGAATTTCCTTCAAGCCGTGCTGTTTACACTAATACCTCCACTGGTT
TCGCCGCTTTTCCAAGGGTGCTGCCGCCGTGGATGGAGCCGCCCGGTACGACCATTACCG
GCTGTACCCGGTGTCCGAGCTGGCGACGGACGAGCAGGTGCAGCCTGGTTCCAGCAGCTT
GGAGGCGAAGAGCGACAGCTGGCCACCTTTTACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7897#2      ------------------------------------------------------------
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      --GATAAGATAGCTTTCATGACGGTGCGTGTCCATCAACATCCATAGAGACACGGTAAGA 58
consensus_7897#1      CCGGTCTCTTGGTATTT-CGACACTGCAAATGGA--GATTGTCTTACAGGTCTGGTGGTG 57
                                                                                  

consensus_7897#2      ------------------------------------------------------------
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      GAATAAGGTCATCAAGG-AGAACAATCCGATGAACGGTTGAATTGAATTTGATTGATCTC 117
consensus_7897#1      ATTCCTTTTTTTTAATATAAGACAAACGTACAGAGAGATAAGATAGCTTTCAT-GACGGT 116
                                                                                  

consensus_7897#2      ---------------------------NAGACCAGAAAT-----CGGCACGAGGN-GTTT 27
consensus_7897#3      --------------------GGTTAAAAAAACAAGAATTTCCTTCAAGCCGTGCT-GTTT 39
consensus_7897#0      GTTCATCCGTGTTTTTTTTTCTTTGTA-GGTTGCAAACCCCGATCCCGACGAACAAGGCC 176
consensus_7897#1      GCGTGTCCATCAACATCCATAGAGACACGGTTGCAAACCCCGATCCCAACGAACAAGGCC 176
                                                         **       *    **     *   

consensus_7897#2      ATACT--------CACTG-TT--TCGCCGCTTATCNCCAAGGTGCTGCCGCCGTGGATGG 76
consensus_7897#3      ACACTAATACCTCCACTGGTT--TCGCCGCTT-TTCCAAGGGTGCTGCCGCCGTGGATGG 96
consensus_7897#0      GGACGCGCGAATCCTCTCCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGTGGATGG 236
consensus_7897#1      GGACGCGCGAATCCTCTGCTCAGTCGCAGGCAAGATGTCTGGTGCTGCCGCCGCGGATGG 236
                        **         * **  *   **** *           ************* ******

consensus_7897#2      AGCCGCCCGGTACGACCATTACCGGCTGTACC--GTGTC-GAGCTGGCGACGGACGAGCA 133
consensus_7897#3      AGCCGCCCGGTACGACCATTACCGGCTGTACCCGGTGTCCGAGCTGGCGACGGACGAGCA 156
consensus_7897#0      AGCCGCCCGGTACGACCATTACCGGCTGTACC--GTGTC-GAGCTGGCGACGGACGAGCA 293
consensus_7897#1      AGCCGCCCGGTACGACCATTACCGGCTGTACC--GTGTC-GAGCTGGCGACGGACGAGCA 293
                      ********************************  ***** ********************

consensus_7897#2      GGTTCAGCT--GTTCCAGCAGCTTG-AGGCGAAGAGCGACAGCTGTGNACCGTTTACTGG 190
consensus_7897#3      GGTGCAGCCTGGTTCCAGCAGCTTGGAGGCGAAGAGCGACAGCTGGCCACCTTTTACG-- 214
consensus_7897#0      GGTGCAGCT--GTTCCAGCAGCTTG-AGGCGAAGAGCGACAGCTG--CACCTTTTACGGC 348
consensus_7897#1      GGTGCAGCT--GTTCCAGCAGCTCG-AGGCGAAGAGCGACAGCTG--CACCTTTTACGGC 348
                      *** ****   ************ * *******************   *** *****   

consensus_7897#2      CCAATGCTGCGGNAANCCGGGTNCAGGCAGCTCACGAGTCAA------------------ 232
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      CATGCGCGGCAACCGGGCCAGCAGCTCACGATCATGTTGTCCGCCAGCAAGGTCGCGCAC 408
consensus_7897#1      CATGCGCGGCAACCGGGCCAGCAGCTCACGATCATGGTGTCCGCCAGCAAGGTCGCGGAC 408
                                                                                  

consensus_7897#2      ------------------------------------------------------------
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      TTTGAGGATCTGCTCGCGCTACACGCAGTGAGCGGGCGCGTGCTCGAGCGCAACATGCAG 468
consensus_7897#1      TTTGAGGATCTGCTCGCGCTACACGCAGTGAGCGGGCGCGTGCTCGAGCGCAACATGCAG 468
                                                                                  

consensus_7897#2      ------------------------------------------------------------
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      CAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAGCCAGATG 528
consensus_7897#1      CAGCTGATCGAGCGGGAAGCGGCCACGGTACAGCCGGCCAGCACCGACCCGAACCAGATG 528
                                                                                  

consensus_7897#2      ------------------------------------------------------------
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      GACTGGGACCACTACTTTCAGCTCGAGACGATATACGCCTGGATGGAGCTGCTGGCGGAA 588
consensus_7897#1      GACTGGGAGCACTACTTTCAGCTCGAGACGATTTACGCCTGGATGGAGCTGCTGGCGGAA 588
                                                                                  

consensus_7897#2      ------------------------------------------------------------
consensus_7897#3      ------------------------------------------------------------
consensus_7897#0      CGCTTCCCGGGCGCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGGCGCCCGATC 648
consensus_7897#1      CGCTTTCCGGGCGCGGTCAGCACGCTCGACATCGGCACCAGTTACGAGGGG--------- 639
                                                                                  

consensus_7897#2      --------------------------------------
consensus_7897#3      --------------------------------------
consensus_7897#0      AGGGGAGTGAAGCTGTCGCGCCGTCCCGGCAACAAAGC 686
consensus_7897#1      --------------------------------------