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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7904#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1202 fasta sequence
[CCGCGGACGCGTGGGGTGAGTGTGCTGTTCGGTAGTGTTCACCATTCACCGTTTGCACGTCATCGCGCTCGGTCGGTTGTTGGGTAACTTTCACTCCGTGCCACACAGTAGAGGACCTCGATCGTGGTGGGGTGGTGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACATCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTAGCAAGTTTAGCTCACTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAATGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAA-GGAAAAAAACACACACGATTAAA-GAATTAAA-ATTCTACAGCAGCAACAATGTTCACCGGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCCAGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGCCACACACAGCGAGGTCAAGCGGAGCATCATCAAGG-AGCTGAAAACGCTCGGTTTCACCGTCGAGCT-GGACGAGTTCAACCAGAAGGCACCGCACTTTGGCATGCTCAAGTTTACCAACATCGTGGCCAAGCTAAATCCGGCGGCCGACAAATACCTTGCCCTGGCCTGTCACTACGATAGCAAATACTTCCGCGAGCACGCGTTCGTCGGTGCGGTCGATTCGGCCGTTCCCTGTGCGATGATGCTGAATCTGGCCAAAACGACCGAATCCGCGCTGAAGCTGTTGCGCAACAATACGGACCTCAGCCTGATGCTGCTGTTCTTCGATGGTTAGGAAGCGTTCCGGAAGTGGTCCGCTACGGATTCACTGTACGGCTCGAAGCATTTGGCGACCAAGTGGACCACGGCACCGTACGTGTCGAAAGCGCTGGGAAAATCGATGCGCGAAATTGATCGCGTTCAGCTGCTCGTCCTGCTCGATCTGATCGGCAGTGAGGATCCCAAGTTCTACAACTTCTTCCCCAACACACGTAACTACCACCGGCGGTTGAGCAAAATC]
[+] EMBL BM631280 [CCGCGGACGCGTGGGGTGAGTGTGCTGTTCGGTAGTGTTCACCATTCACCGTTTGCACGTCATCGCGCTCGGTCGGTTGTTGGGTAACTTTCACTCCGTGCCACACAGTAGAGCACCTCGATCGTGGTGGGGTGGTGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACGTCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTAGCAAGTTTAGCTCGCTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAGTGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAA GGAAAAAAACACACACGATTAAA GAATTAAA CTTCTACAGCAGCAACAATGTTCAGCAGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCCAGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAA ]
[+] EMBL BM649108 [ ccgACGTCATCGCGCTCGGTCGGTTGTTGGGTAACTTTCACTCCGTGCCACACAGTAGAGGACCTCGATCGTGGTGGGGTGGTGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACATCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTGGCAAGTTTAGCTCACTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAATGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAA GGAAAAAAACACACACGATTAAA GAATTAAA ATTCTACAGCAGCAACAATGTTCACCGGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCCAGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGCCACACACAGCGAGGTCAAGCGGAGCATCATCAAGGCAGCTGAAAACGCTCGGTTTCACCGTCGAGCTGGGACGAGTTCAACCAGAAGGCACCGCACTTTGGC ]
[+] EMBL BM643340 [ ccgGTCATCGCGCTCGGTCGGTTGTTGGGTAACTTTCACTCCGTGCCACACAGTAGAGGACCTCGATCGTGGTGGGGTGGTGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACATCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTAGCAAGTTTAGCTCACTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAATGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAA GGAAAAAAACACACACGATTAAA GAATTAAA ATTCTACAGCAGCAACAATGTTCACCGGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCCAGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGCCACACACAGCGAGGTCAAGCGGAGCATCATCAAGG AGCTGAAAACGCTCGGTTTCACCGTCGAGCT GGACGAGTTCAACCAGAAGGCACCGCACTTTGG ]
[+] EMBL BM620392 [ ccGGGTAACTTTCACTCCGTGCCACACAGTAGAGGACCTCGATCGTGGTGGGGTGGTGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACATCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTAGCAAGTTTAGCTCACTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAATGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAA GGAAAAAAACACACACGATTAAA GAATTAAA ATTCTACAGCAGCAACAATGTTCACCGGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCCAGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGCCACACACAGCGAGG ]
[+] EMBL BM621741 [ ccgGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACGTCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTAGCAAGTTTAGCTCGCTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAGTGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAA GGAAAAAAACACACACGATTAAA GAATTAAA CTTCTACAGCAGCAACAATGTTCAGCAGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCCAGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGC ]
[+] EMBL AL692717 [ cccgagGTNTTNTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTACATCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAACTGTGATACATTTTAGCAAGTTTAGCTCACTACTTACTTGACACAAAACTGCGCAACGGCATGAGCAGCTTAGACTTGGAATGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGTACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAACGGAAAAAAACACACACGATTAAACGAATTAAACATTCTACAGCAGCAACAATGTTCACCGGCAGCGGAATGTGGTGTCTACGATTCGTTTCCTGCCTTCTAGTGACCT ]
[+] EMBL BX616277 [ CGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACAGCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGCCACACACAGCGAGGTCAAGCGGAGCATCATCAAGG AGCTGAAAACGCTCGGTTTCACCGTCGAGCT GGACGAGTTCAACCAGAAGGCACCGCACTTTGGCATGCTCAAGTTTACCAACATCGTGGCCAAGCTAAATCCGGCGGCCGACAAATACCTTGCCCTGGCCTGTCACTACGATAGCAAATACTTCCGCGAGCACGCGTTCGTCGGTGCGGTCGATTCGGCCGTTCCCTGTGCGATGATGCTGAATCTGGCCAAAACGACCGAATCCGCGCTGAAGCTGTTGCGCAACAATACGGACCTCAGCCTGATGCTGCTGTTCTTCGATGGTTAGGAAGCGTTCCGGAAGTGGTCCGCTACGGATTCACTGTACGGCTCGAAGCATTTGGCGACCAAGTGGACCACGGCACCGTACGTGTCGAAAGCGCTGGGAAAATCGATGCGCGAAATTGATCGCGTTCAGCTGCTCGTCCTGCTCGATCTGATCGGCAGTGAGGATCCCAAGTTCTACAACTTCTTCCCCAACACACGTAACTACCACCGGCGGTTGAGCAAAATC]
consensusID : consensus_7904#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence
[ATCCCCCGAGGTTNGAGGTCAGCGGAGCATCATCAGAGCTGAAAACGCTCGGTTTCACCGTCGAGCTGGACGAGTTCAACCAGAAGGCACCGCACTTTGGCATGCTCAAGTTTACCAACATCGTGGCCAAGCTAAATCCGGCGGCCGACAAATACCTTGGCCCTGGCCTGTCACTACGATAGCAAATACTTCCGCGAGCACGCGTTCGTCGGTGCGGTCGATTCGGCCGTTCCCTGTGCGATGATGCTGAATCTGGCCAAAACGACCGAATCCGCGCTGAAGCTGTTGCGCAACAATACGGACCTCAGCCTGATGCTGCTGTTCTTCGATGGTGAGGAAGCGTTCCGGAAGTGGTCCGCTACGGATTCACTGTACGGCTCGAAGCATTTGGCGACCAAGTGGACCACGGCACCGTACGTGTCGAAAGCGCTGGGAAAATCGATGCGCGAAATTGATCGCGTCAGCTGCTCGTCCTGGTCGATCTGATCGGAGTGAGGATTCCAAGTTCTAAAAA]
[+] EMBL AL932038 [ATCCCCCGAGGTTNGAGGTCAGCGGAGCATCATCAGAGCTGAAAACGCTCGGTTTCACCGTCGAGCTGGACGAGTTCAACCAGAAGGCACCGCACTTTGGCATGCTCAAGTTTACCAACATCGTGGCCAAGCTAAATCCGGCGGCCGACAAATACCTTGGCCCTGGCCTGTCACTACGATAGCAAATACTTCCGCGAGCACGCGTTCGTCGGTGCGGTCGATTCGGCCGTTCCCTGTGCGATGATGCTGAATCTGGCCAAAACGACCGAATCCGCGCTGAAGCTGTTGCGCAACAATACGGACCTCAGCCTGATGCTGCTGTTCTTCGATGGTGAGGAAGCGTTCCGGAAGTGGTCCGCTACGGATTCACTGTACGGCTCGAAGCATTTGGCGACCAAGTGGACCACGGCACCGTACGTGTCGAAAGCGCTGGGAAAATCGATGCGCGAAATTGATCGCGTCAGCTGCTCGTCCTGGTCGATCTGATCGGAGTGAGGATTCCAAGTTCTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7904#0 CCGCGGACGCGTGGGGTGAGTGTGCTGTTCGGTAGTGTTCACCATTCACCGTTTGCACGT 60
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 CATCGCGCTCGGTCGGTTGTTGGGTAACTTTCACTCCGTGCCACACAGTAGAGGACCTCG 120
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 ATCGTGGTGGGGTGGTGTGTTGTTTTGTGCGTGATTTTGTAACCTGTGTGCGTCGGCTAC 180
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 ATCATGTAATAATGATATACAGTTTCTGTCGCTTGCAAAGCTCCATTCCATTCTGTAAAC 240
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 TGTGATACATTTTAGCAAGTTTAGCTCACTACTTACTTGACACAAAACTGCGCAACGGCA 300
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 TGAGCAGCTTAGACTTGGAATGATTCGTGTTTGTGCGTGCTTGTTTGTGTTTGATTACGT 360
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 ACGCAGCTTCTAAGACAACCGGCTTGTTATCAGTTTGTGAAGGAAAAAAACACACACGAT 420
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 TAAAGAATTAAAATTCTACAGCAGCAACAATGTTCACCGGCAGCGGAATGTGGTGTCTAC 480
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 GATTCGTTTCCTGCCTTCTAGTGACCTTCACAGTATTGCCAATGCAACAGACCACGGCCC 540
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 AGCTTACGCTCGAGCAGATGCGAATAGTGTCGACCCGTACGAACGAATCGCACTTCGACA 600
consensus_7904#1 ------------------------------------------------------------
consensus_7904#0 GCATGCTCAAAAGCATCCTCAAGCCACGAATCGTTGGCACCGCCACACACAGCGAGGTCA 660
consensus_7904#1 --------------------------------------ATC-CCCCGAGGTTNGAGGTCA 21
* * ** * *******
consensus_7904#0 AGCGGAGCATCATCAAGGAGCTGAAAACGCTCGGTTTCACCGTCGAGCTGGACGAGTTCA 720
consensus_7904#1 -GCGGAGCATCATCA--GAGCTGAAAACGCTCGGTTTCACCGTCGAGCTGGACGAGTTCA 78
************** *******************************************
consensus_7904#0 ACCAGAAGGCACCGCACTTTGGCATGCTCAAGTTTACCAACATCGTGGCCAAGCTAAATC 780
consensus_7904#1 ACCAGAAGGCACCGCACTTTGGCATGCTCAAGTTTACCAACATCGTGGCCAAGCTAAATC 138
************************************************************
consensus_7904#0 CGGCGGCCGACAAATACCTTG-CCCTGGCCTGTCACTACGATAGCAAATACTTCCGCGAG 839
consensus_7904#1 CGGCGGCCGACAAATACCTTGGCCCTGGCCTGTCACTACGATAGCAAATACTTCCGCGAG 198
********************* **************************************
consensus_7904#0 CACGCGTTCGTCGGTGCGGTCGATTCGGCCGTTCCCTGTGCGATGATGCTGAATCTGGCC 899
consensus_7904#1 CACGCGTTCGTCGGTGCGGTCGATTCGGCCGTTCCCTGTGCGATGATGCTGAATCTGGCC 258
************************************************************
consensus_7904#0 AAAACGACCGAATCCGCGCTGAAGCTGTTGCGCAACAATACGGACCTCAGCCTGATGCTG 959
consensus_7904#1 AAAACGACCGAATCCGCGCTGAAGCTGTTGCGCAACAATACGGACCTCAGCCTGATGCTG 318
************************************************************
consensus_7904#0 CTGTTCTTCGATGGTTAGGAAGCGTTCCGGAAGTGGTCCGCTACGGATTCACTGTACGGC 1019
consensus_7904#1 CTGTTCTTCGATGGTGAGGAAGCGTTCCGGAAGTGGTCCGCTACGGATTCACTGTACGGC 378
*************** ********************************************
consensus_7904#0 TCGAAGCATTTGGCGACCAAGTGGACCACGGCACCGTACGTGTCGAAAGCGCTGGGAAAA 1079
consensus_7904#1 TCGAAGCATTTGGCGACCAAGTGGACCACGGCACCGTACGTGTCGAAAGCGCTGGGAAAA 438
************************************************************
consensus_7904#0 TCGATGCGCGAAATTGATCGCGTTCAGCTGCTCGTCCTGCTCGATCTGATCGGCAGTGAG 1139
consensus_7904#1 TCGATGCGCGAAATTGATCGCGT-CAGCTGCTCGTCCTGGTCGATCTGATCGG-AGTGAG 496
*********************** *************** ************* ******
consensus_7904#0 GATCCCAAGTTCTACAACTTCTTCCCCAACACACGTAACTACCACCGGCGGTTGAGCAAA 1199
consensus_7904#1 GATTCCAAGTTCTAAAAA------------------------------------------ 514
*** ********** **
consensus_7904#0 ATC 1202
consensus_7904#1 ---
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||