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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 964 fasta sequence
[CGACCCACGCGTCCGCAAAACATAAAACGAATGTATGTATGTCTGTTTTATGTTTGATGTAAAATGTATGTGGAATAATATGTGTGACACACAACAAGCATGGAAAATTGTAAGGGGAACAGCAAAACCAGCAAAACACATAAAACGAAAACAAAAACAAAAAAAAAACAAATCATTGTGGATATTGTAAAACATGGCGCCTAAACCACAAAACAACAAAACACAGCTGTAAGAAAATGATGTTAAGTTAGAAGAAGAGTAAAACAAAAGCAAAGCATAAACGAAACAAACAAAT--ACACACACACAAAGAACATTAGAAGACAAAATTGAGATCGTTTCGGTTAGAAGTTAAAAAAATGGATTATTTTCGTTTGTAAATATTGTAAACAGCGCAAAAACACGTGTTTGAGTGATTTCTTTAATTTTTGTTTTGGCATTGTTTCTGCGAAACAGTTTCTCGTTAAGCCAAATCTCCTAAATTTTCTTTAAAAAAAAGCAAATCATAGTAAAACTACTAAAACCCCAGCAATCGAGCTACTGTCGAAAGCCACTATTATTACTACTTCTTCTATGGACACACACAATCACACATAATGCATTGAGGTTTCTACTTATAACGGGCACCAGTCGAATGATAAGGCGCGAGTGTGTGTGTGTGGTGGAATAGAAAAATAAGAAGAAGAAAACAACGGGACTGACACGGGTTTGCTGGGCAACAACCAGGTACACACGACGACGCTGGAGATTCCGGATTCGAACAGCGAGAGCAACGCAAACACTTGTAGCATGTATTAGGTATTAGAATTGAATTGATAACGGTCCTTGGCCCGTCCCTTTGCTTGTTGGATTGGAGATGGGTTTAGTAGATTGTGTGCAGTAGTAGCAGAAGAAGGAGGGAGGAGGAGGTGACAGTGGTGAAATTGCAAACAATCCCTTCTATCATCTCTCTCTCTCCTGCGACTAG]
[+] EMBL BM577675 [CGACCCACGCGTCCGCAAAACATAAAACGAATGTATGTATGTCTGTTTTATGTTTGATGTAAAATGTATGTGGAATAATATGTGTGACACACAACAAGCATGGAAAATTGTAAGGGGAACAGCAAAACCAGCAAAACACATAAAACGAAAACAAAAACAAAAAAAAAACAAATCATTGTGGATATTGTAAAACATGGCGCCTAAACCACAAAACAACAAAACACAGCTGTAAGAAAATGATGTTAAGTTAGAAGAAGAGTAAAACAAAAGCAAAGCATAAACGAAACAAACAAAT ACACACACACAAAGAACATTAGAAGACAAAATTGAGATCGTTTCGGTTAGAAGTTAAAAAAATGGATTATTTTCGTTTGTAAATATTGTAAACAGCGCAAAAACACGTGTTTGAGTGATTTCTTTAATTTTTGTTTTGGCATTGTTTCTGCGAAACAGTTTCTCGTTAAGCCAAATCTCCTAAATTTTCTTTAAAAAAAAGCAAATCATAGTAAAACTACTAAAACCCCAGCAATCGAGCTACTGTCGAAAGCCACTATTATTACTACTTCTTCTATGGACACACACAATCACACATAATGCATTGAGGTTTCTACTTATAACGGGCACCAGTCGAATGATAAGGCGCGCGTGTGTGTGTGTGGTGGAATAGAAAAAGAAGA ]
[+] EMBL BX620160 [ GTATGTCTGTTTTATGTTTGNTGTAAAATGTATGTGGAATAATATGTGTGACACACAACAAGCATGGAAAATTGTAAGGGGAACAGCAAAACCAGCAAAACACATAAAACGAAAACAAAAACAAAAAAAAAACAAATCATTGGGGATATTGTAAAACATGGCGCCTAAACCACAAAACAACAAAACACAGCTGTAAGAAAATGAAGTTAAGTTAGAAGAAGAGTAAAACAAAAGCAAAGCATAAACGAAACAAACAAATACACACACACACAAAGAACATTAGAAGACAAAATTGAGATCGTTTCGGTTAGAAGTTAAAAAAATGGATTATTTTCGTTTGTAAATATTGTAAACAGCGCAAAAACACGTGTTTGAGTGATTTCTTTAATTTTTGTTTTGGCATTGTTTCTGCGAAACAGTTTCTCGTTAAGCCAAACCTCCTAAATTTTCTTTTAAAAAAAGCAAATCATAGTAAAACTACTAAAACCCCAGCAATCGAGCTACTGTCGAGAGCCACTATTATTACAACTTCTTCTATGGACACACACAATCACACATAATGCATTGAGGTTTCTACTTATAACGGGCACCAGTCGAATGATAAa ]
[+] EMBL BM608906 [ ccgGGGCACCAGTCGAATGATAAGGCGCGAGTGTGTGTGTGTGGTGGAATAGAAAAATAAGAAGAAGAAAACAACGGGACTGACACGGGTTTGCTGGGCAACAACCAGGTACACACGACGACGCTGGAGATTCCGGATTCGAACAGCGAGAGCAACGCAAACACTTGTAGCATGTATTAGGTATTAGAATTGAATTGATAACGGTCCTTGGCCCGTCCCTTTGCTTGTTGGATTGGAGATGGGTTTAGTAGATTGTGTGCAGTAGTAGCAGAAGAAGGAGGGAGGAGGAGGTGACAGTGGTGAAATTGCAAACAATCCCTTCTATCATCTCTCTCTCTCCTGCGACTAG]
[+] EMBL BM600272 [ ccgGGGCACCAGTCGAATGATAAGGCGCGAGTGTGTGTGTGTGGTGGAATAGAAAAATAAGAAGAAGAAAACAACGGGACTGACACGGGTTTGCTGGGCAACAACCAGGTACACACGACGACGCTGGAGATTCCGGATTCGAACAGCGAGAGCAACGCAAACACTTGTAGCATGTATTAGGTATTAGAATTGAATTGATAACGGTCCTTGGCCCGTCCCTTTGCTTGTT GATTGGAGATGGGTTTAGTAGATTGTGTGCAGTAGTATCAGAAGAAGGA GGAGGAGGAGGTGACAGTGGTGAAATTGCAAACAATCCCTTCTATCATCTCTCTCTCTCCTGCGACTAG]
consensusID : consensus_7941#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 873 fasta sequence
[TTTTTTTTAGAGATAGCTTTTAGAGAGAGAAGGAAAAAAAGGGTGTTTATTGACAAAAGAAACTGTGACGCGGGTTACTCCTTAAATTCCAACACACACACACACAACTCATCAAATGGTGCATTTTGTTGTTGTTTGTTTTCTCGCTTCTAACTTGTGTGTGTGTTTTTAGCTGATTTTGATAAATTATTTCCTGCACGTTAAATGTGTCAGCTCAGTCAGGCGAAAAGGCACAAACATAACGTCGTTTTATAGGTTTAAGCAAAAAAGAAAAGAAAACGGGGATAACGAAAACACACAGTGACAGTGGGAATGGGACACTGCTGGAAAAGAATGGCTTTAATTATTGGAATTTAAATGAAAGGGCGATGGAGAAGTAGTAGCAAAAATAAAAACAAGCATAGGTAAAACGAGAAACAAAAGAAAGGAAAGAAGGGCAATAGAGAGAAGTTCGTTATTTAACAAACAAAACACTATTCAAAATGTATAACAAATAACTCCGGAACAAAACAAAATATGACAAAATACTAGGGGTTTTTTTGTTCTTCTCATAATCCAAAACACACAACAACAAGAGCAACAATGTATACACAAACACATAAAAACCCCTCAATCAAAGTATTGCTAAGTTTGTACAGTGGGGGTGGGAAAACAGAGAAGAAAAAAAGAAAATCATAATGGCACCAGCAAATCTACATTACTAATACGAGACTGCAGTTCAGAAAACAAAACACAAAACATAAAACGAATGTATGTATGTCTGTTTTATGTTTGATGTAAAATGTATGTGGAATAATATGTGTGACACACAACAAGCATGGAAAATTGTAAGGGGAACAGCAAAACCAGCAAAACACATAAAACGAAAACAAA]
[+] EMBL AGA283712 [TTTTTTTTAGAGATAGCTTTTAGAGAGAGAAGGAAAAAAAGGGTGTTTATTGACAAAAGAAACTGTGACGCGGGTTACTCCTTAAATTCCAACACACACACACACAACTCATCAAATGGTGCATTTTGTTGTTGTTTGTTTTCTCGCTTCTAACTTGTGTGTGTGTTTTTAGCTGATTTTGATAAATTATTTCCTGCACGTTAAATGTGTCAGCTCAGTCAGGCGAAAAGGCACAAACATAACGTCGTTTTATAGGTTTAAGCAAAAAAGAAAAGAAAACGGGGATAACGAAAACACACAGTGACAGTGGGAATGGGACACTGCTGGAAAAGAATGGCTTTAATTATTGGAATTTAAATGAAAGGGCGATGGAGAAGTATTAGCAAAAATAAAAACAAGCATAGGTAAAACGA ]
[-] EMBL AGA285000 [ TTGTTTTCTCGCTTCTAACTTGTGTGTGTGTTTTTAGCTGATTTTGATAAATTATTTCCTGCACGTTAAATGTGTCAGCTCAGTCAGGCGAAAAGGCACAAACATAACGTCGTTTTATAGGTTTAAGCAAAAAAGAAAAGAAAACGGGGATAACGAAAACACACAGTGACAGTGGGAATGGGACACTGCTGGAAAAGAATGGCTTTAATTATTGGAATTTAAATGAAAGGGCGATGGAGAAGTAGTAGCAAAAATAAAAACAAGCATAGGTAAAACGAGAAACAAAAGAAAGGAAAGAAGGGCAATAGAGAGAAGTTCGTTATTTAACAAACAAAACACTATTCAAAATGTATAACAAATAACTCCGGAACAAAACAAAATATGACAAAATACTAGGGGTTTTTTTGTTCTTC ]
[+] EMBL BM583775 [ ccgGTTTTATAGGTTTAAGCAAA AAAA AAAACGGGGATAACGAAAACACACAGTGACAGTGGAAGTGGGAAACTACTGGAAAAGAATGGCTTTAATTATTGGAATTTAAATGAAAGGGCGATGGAGAAGTAGTAGCAAAAATAAAAACAAGCATAGGTAAACCGAGAAACAAAAGAAAGGAAAGAAGGGCAATAGAGAGAAGTTCGTTATTTAACAAACAAAACACTATTCAAAATGTATTACAAATAACTCCGGAACAAAACAAAATATGACAAAATACTAGGGGTTTTTTTGTTCTTCTCATAATCCAAAACACACAACAACAAGAGCAACAATGTATACACAAACACATAAAAACCCCTCAATCAAAGTATTGCTAAGTTTGTAC ]
[-] EMBL AGA283646 [ TAACAAACAAAACACTATTCAAAATGTATAACAAATAACTCCGGAACAAAACAAAATATGACAAAATACTAGGGGTTTTTTTGTTCTTCTCATAATCCAAAACACACAACAACAAGAGCAACAATGTATACACAAACACATAAAAACCCCTCAATCAAAGTATTGCTAATTTTGTACAGTGGGGGTGGGAAAACAGAGAAGAAAAAAAGAAAATCATAATGGCACCAGCAAATCTACATTACTAATACGAGACTGCAGTTCAGAAAACAAAACACAAAACATAAAACGAATGTATGTATGTCTGTTTTATGTTTGATGTAAAATGTATGTGGAATAATATGTGTGACACACAACAAGCATGGAAAATTGTAAGGGGAACAGCAAAACCAGCAAAACACATAAAACGAAAACAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7941#0 ----CGACCCACGCGTCCGCAAAACATAAAACGAATGTATGTATGTCTGTTTTATGTTTG 56
consensus_7941#1 TTTTTTTTAGAGATAGCTTTTAGAGAGAGAAGGAAAAAAAGGGTGTTTATTGACAAAAGA 60
* * * * * * ** *** * * *** * **
consensus_7941#0 ATGTAAAATGTATGTGGAATAATATGTGT-GACACACAACAAGCATGGAAAATTGTAAGG 115
consensus_7941#1 AACTGTGACGCGGGTTACTCCTTAAATTCCAACACACA-CACACACAACTCATCAAATGG 119
* * * * ** ** * ******* ** ** ** * **
consensus_7941#0 GGAACAGCAAAACCAGCAAAACACATAAAACGAAAACAAAAACAAAAAAAAAACAAATCA 175
consensus_7941#1 TGCATTTTGTTGTTGTTTGTTTTCTCGCTTCTAACTTGTGTGTGTGTTTTTAGCTGATTT 179
* * * * ** * * **
consensus_7941#0 TTGTGGATATTGTAAAACATG------GCGCCTAAACCACAAAACAACAAAACACAGCTG 229
consensus_7941#1 TGATAAATTATTTCCTGCACGTTAAATGTGTCAGCTCAGTCAGGCGAAAAGGCACAAACA 239
* * ** * * ** * * * * * * * * ** ****
consensus_7941#0 TAAGAAAATGATGTTAAGTTAGAAGAAGAGTAAAACAAAAGCAAAGCATAAACGAAACAA 289
consensus_7941#1 TAACGTCGTTTTAT-AGGTTTAAGCAAAAAAGAAAAGAAAACGGGG-ATAACGAAAACAC 297
*** * * * * *** * ** * *** *** * * **** *****
consensus_7941#0 ACAAATACACACACACAAAGAACATTAGAAGACAAAATTGAGATCGTTTCGGTTAGAAGT 349
consensus_7941#1 ACAGTGACA-GTGGGAATGGGACACTGCTGGAAAAGAATGGCTTTAATT--ATTGGAATT 354
*** *** * * *** * ** ** * ** * ** ** *** *
consensus_7941#0 TAAAAAAATGGATTATTTTCGTTTGTAAATATTGTAAACAGCGCAAAAACACGTGTTTGA 409
consensus_7941#1 TAAATGAAAGGGCGAT--------GGAGAAGTAGTAGCAAAAATAAAAACAAGCATAGGT 406
**** ** ** ** * * * * *** * ******* * * *
consensus_7941#0 GTGATTTCTTTAATTTTTGTTTTGGCATTGTTTCTGCGAAACAGTTTCTCGTTAAGCCAA 469
consensus_7941#1 AAAACGAGAAACAAAAGAAAGGAAAGAAGGGCAATAGAGAGAAGTTCGTTATTTAACAAA 466
* * * * * * **** * ** * * **
consensus_7941#0 ATCTCCTAAATTTTCTTTAAAAA--AAAGCAAATCATAGTAAAACTACTAAAACCCCAGC 527
consensus_7941#1 -----CAAAACACTATTCAAAATGTATAACAAATAACTCCGGAAC----AAAACAAAATA 517
* *** * ** **** * * ***** * *** ***** *
consensus_7941#0 AATCGAGCTACTGTCGAAAGCCACTATTATTACTACTTCTTCTATGGACACACACAATCA 587
consensus_7941#1 TGACAAAATACT----AGGGGTTTTTTTGTT-CTTCTCATAATCCAAA-ACACACAACAA 571
* * **** * * * ** ** ** ** * * * ******** *
consensus_7941#0 CACATAATGCATTGAGGTTTCTACTTATA-ACGGGCACCAGTCGAATGATAAGGCGCGAG 646
consensus_7941#1 CA---AGAGCAACAATGTATACACAAACACATAAAAACCCCTCAAT---CAAAGTATTGC 625
** * *** * ** * ** * * * *** ** * ** *
consensus_7941#0 TGTGTGTGTGTGGTGGAATAGAAAAATAAGAAGAAGAAAACAACGGGACTGACACGGGTT 706
consensus_7941#1 TAAGTTTGTACAGTGGGGGTGGGAAAACAGA-GAAGAAAAAAAGAAAATCATAATGGC-- 682
* ** *** **** * *** *** ******** ** * * **
consensus_7941#0 TGCTGGGCAACAACCAGGTACACACGACGACGCTGGAGATTCCGGATTCGAACAGCGAGA 766
consensus_7941#1 ---------ACCAGCAAATCTACATTACTA-ATACGAGACTGCAGTTCAGAAAACAAAAC 732
** * ** * *** ** * **** * * * * *** * *
consensus_7941#0 GCAACGCAAACACTTGTAGCATGTAT-TAGGTATTAGAATTGAATTGATAACGGTCCTTG 825
consensus_7941#1 ACAAAACATAAAACGAATGTATGTATGTCTGTTTTATGTTTGA--TGTAAAATGTATGTG 790
*** ** * * * ****** * ** *** **** ** ** ** **
consensus_7941#0 GCCCGTCCCTTTGCTTGTTGGATTGGAGATGGGTTTAGTAGATTGTGTGCAGTAGTAGCA 885
consensus_7941#1 GAA-------TAATATGTGTGACACACAACAAGCATGGAAAATTGTAAG-GGGAACAGCA 842
* * *** ** * * * * * ***** * * * ****
consensus_7941#0 GAAGAAGGAGGGAGGAGGAGGTGACAGTGGTGAAATTGCAAACAATCCCTTCTATCATCT 945
consensus_7941#1 AAACCAGCAAAACACATAAAACGAAAACAAA----------------------------- 873
** ** * * * ** *
consensus_7941#0 CTCTCTCTCCTGCGACTAG 964
consensus_7941#1 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||