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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7951#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 995 fasta sequence
[ATATGTTAGTAGATTTAATGGCAATAGTTCAACTACGTGGTAAACGTGTCTCCTTCCTTCGCTACATTAGCTTTCTTAAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGCGACAGATCCATTCCCATTTGCATGTAACAGCATCGACTCGCTTGCATACTTTCTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT--CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACACAGTCATGCAGGCACTTCTTCCACGCGTAGAG-GATAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAAGCAC-TTGACGTGGAAAAGAAACGGCGTGACTGCAAACACCGGCCTACGGGAGTCAGTGGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTTACGCGACCGGACCGACGAGACGACGCTGACGGTCCCCCCTTCAGGCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGTATTTCAGGAAACATTATGAATTCAGTTGGCC]
[+] EMBL CNS09BY8 [ATATGTTAGTAGATTTAATGGCAATAGTTCAACTACGTGGTAAACGTGTCTCCTTCCTTCGCTACATTAGCTTTCTTAAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGCGACAGATCCATTCCCATTTGCATGTAACAGCATCGACTCGCTTGCATACTTTCTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACAAAGTCATGCAGGCACTTCTTCCACGCGTAGAG GAAAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAA CACTTTGACGTGGAAAAGAAACGGCGTGACTTCAAACACCGGCCTACGGGAGTTAGTTGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTTACGCGACCGGACCGACGAGACGACGCTGACGGTCCCCCCTTCAGGCAGAACGTAAAAACGCTGTTTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGTATTTCAGGAAACATTATGAATTCAGTTGGCC]
[-] EMBL CNS09BY7 [tatagagAGTAGATTTAATGGCAATAGTTCAACTACGTGGTAAACGTGTCTCCTTCCTTCGCTACATTAGCTTTCTTTAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGCGACAGATCCATTCCCATTTGCATGTAACAGCATCAACTCGCTTGCATACTTTCTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACACAGTCATGCAGGCACTTCTTCCACGCGTAGCGAGATAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAAGCAC TTGACGTGGAAAAGAAACGGCGTGACTGCAAACACCGGCCTACGGGAGTCAGTGGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTGACGCGACCGGACCGACGAGACGACGCTGACGGTCCCCCCTTCAGGCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGTA TTCAGGAAACAATA ]
[+] EMBL CNS09JFI [ TAGATTTAATGGCAATAGTTCAACTACGTGGTAAACGTGTCTCCTTCCTTCGCTACATTAGCTTTCTTAAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGCGACAGATCCATTCCCATTTGCATGTAACAGCATCGACTCGCTTGCATACTTTCTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTTATGCCACAAAGTCATGCAGGCACTTCTTCCACGCGTAGAG GAAAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAA CACTTTGACGTGGAAAAGAAACGGCGTGACTTCAAACACCGGCCTACGGGAGTTAGTTGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTTACGCGACCGGACCGACGAGACGACGCTGACGGTCCCCCCTTCAGGCAGAACGTCCGTTCGCTGTTTTCCAGCGCCGAGCG ]
[+] EMBL CNS09GG2 [ TGGCAATAGTTCAACTACGTGGTAAACGTGTCTCCTTCCTTCGCTACATTAGCTTTCTTAAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGCGACAGATCCATTCCCATTTGCATGTAACAGCATCGACTCGCTTGCATACTTTCTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACACAGTCGTGCAGGCACTTCTTCCACGCGTAGAG GATAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAA CACTTTGACGTGGAAAAGAAACGGCGTGACTACAAACACCGGCCTACGGGAGTCAGTGGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTA AAAAAAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTTACGCGACCGGACCGACGAGACGACGCTGACGGT CCCCCTTCAGGCAGAACGTCCGTTCGCTGTGTTCCAGCGC ]
[-] EMBL CNS09GG1 [ CTTCGCTACATTAGCTTTCTTAAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGCGACAGATCCATTCCCATTTGCATGTAACAGCATCGACTCGCTTGCATATTTTTTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACACAGTCGTGCAGGCACTTCTTCCACGCGTAGCGAGATAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAAGCAC TTGACGTGGAAAAGAAACGGCGTGACTGCAAACACCGG CTACGGGAGTCAGTGGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTGACGCGACCGGACCGACGAGACGACGCTGACGGTCCCCCCTTCAGGCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGT ]
[-] EMBL CNS09JFH [ ACTCGCTTGCATACTTTTTATTGCACACGCACACGCACACACACGAACACGCACCCGAAAGACGCAACGGGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTT CACTTGTCACAAGACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACACAGTCATGCAGGCACTTCTTCCACGCGTAGCGAGATAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAAGCAC TTGACGTGGAAAAGAAACGGCGTGACTGCAAACACCGG CTACGGGAGTCAGTGGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTCGTCGTCGTCATCGTTCGGGCCTGTGACGCGACCGGACCGACGAGACGACGCTGACGGTCCCCCCTTCAGGCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGTATTT ]
[-] EMBL BM639613 [ GGACACGGTCGAACGACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACTGATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACCGTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTTGCCACTTGTCACAAGACGGGTGCTACGTAGTCCCCAGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTTAAAAACGAATTTATAGTACGCTACAGTCATGCCACACAGTCATGCAGGCACGTCTTCCACGCGT AG CCCAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGTCTTTCTAACGGGGAGGAAACCACACAATCACGCGCATAAGTATAGCGAAGCAC TTGACGTGGAAAAGAAACGGCGTGACTGCAAACACCGGGCTACGGGAGTCAGTGGTGCTTTCGCGGGCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAAACAAAACAAAACAAAAAGAATGGGAAAAACACTCTTAGCTGCTAAGCGTCCGCTGGGTCGTCGTCGTCATCGcgg ]
consensusID : consensus_7951#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[TCGGGCCTGTGACGCGACCGGACCGACGAGACGACGCTGACCGGTCCCCCCTTTCAGGCCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGTATTTCAGGAAACATTATGAATCGTAGCTTGAACTTAACCGATCATTCGTCGGGGAGGGTGGCGTCGATACGGAGCTGGAATTGTTGCTCGCCACACTTTGCCTGGATTCCGACTGCATATCGGCGACCGAAACCTTTAGAACATCGTGCAGAGAGGACATGCTTCCCAACGGACTAGGTGAGCGTGGTAACGACGGTGGCTGATCGCGCGGTCTGGCTGGTGCCGTACGCTTTGCACCTGGTAGAGAGTTGTTCGATCCGTTCAGTTGGTGGATCATCGAGGGACGCGGAGGCGCACGGGGTGGTGGCGGAGCATGCCGCATCGTTGAAATCCGTTGCTGTTGCGTACTCTGGTCGGCCGTTTCGATCGTGGTTGGTAGATCGAGCAGCCGTTGTTTCTGGATGCCATCGCCAGGGCCCATGTGCGAGATATGGTTGAAGTTAGTGGGCGCGGAGATAAGCTTCGAGCGACGATCGGTGCTCGTGCGCGG]
[-] EMBL BM627066 [TCGGGCCTGTGACGCGACCGGACCGACGAGACGACGCTGACCGGTCCCCCCTTTCAGGCCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTTGGTGAAGTATTTCAGGAAACATTATGAATCGTAGCTTGAACTTAACCGATCATTCGTCGGGGAGGGTGGCGTCGATACGGAGCTGGAATTGTTGCTCGCCACACTTTGCCTGGATTCCGACTGCATATCGGCGACCGAAACCTTTAGAACATCGTGCAGAGAGGACATGCTTCCCAACGGACTAGGTGAGCGTGGTAACGACGGTGGCTGATCGCGCGGTCTGGCTGGTGCCGTACGCTTTGCACCTGGTAGAGAGTTGTTCGATCCGTTCAGTTGGTGGATCATCGAGGGACGCGGAGGCGCACGGGGTGGTGGCGGAGCATGCCGCATCGTTGAAATCCGTTGCTGTTGCGTACTCTGGTCGGCCGTTTCGATCGTGGTTGGTAGATCGAGCAGCCGTTGTTTCTGGATGCCATCGCCAGGGCCCATGTGCGAGATATGGTTGAAGTTAGTGGGCGCGGAGATAAGCTTCGAGCGACGATCGGTGCTCGTGCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7951#0 ATATGTTAGTAGATTTAATGGCAATAGTTCAACTACGTGGTAAACGTGTCTCCTTCCTTC 60
consensus_7951#1 ------------------------------------------------------------
consensus_7951#0 GCTACATTAGCTTTCTTAAATGACATTATAATGGTAACGGGCGATGATGATGATTCCAGC 120
consensus_7951#1 ------------------------------------------------------------
consensus_7951#0 GACAGATCCATTCCCATTTGCATGTAACAGCATCGACTCGCTTGCATACTTTCTATTGCA 180
consensus_7951#1 ------------------------------------------------------------
consensus_7951#0 CACGCACACGCACACACACGAACACGC-ACCCGAAAGACGCAACGGGACACGGTCGAACG 239
consensus_7951#1 -----------------TCGGGCCTGTGACGCGACCGGACCGACGAGACGACGCTGACCG 43
** * * ** *** * * *** *** * ** **
consensus_7951#0 ACACCCCACTAAAGCCGCACATATCCTCTCTTCTACTTTTAGATATAAATCACACCAACT 299
consensus_7951#1 GTCCCCCCTTTCAGGCCAGAACGTCCGTCCGCTGTGTTCCAG----------CGCCGAGC 93
**** * ** * * *** * ** ** * ** *
consensus_7951#0 GATTGGTTTTGTAAGTTTGTTGCTTTACCCCCCACTACAACCTTGATCGTACGATCGACC 359
consensus_7951#1 GGATGGT--TAGCAATTTGGTGAAGTATTTCAGGAAACATTATGAATCGTAGCTTGAACT 151
* **** * * **** ** ** * *** * ****** * **
consensus_7951#0 GTTTCGTTCGTTTGCTTGCCATAATTGATACAGTTGCCTGAATGTGTTCACTTGTCACAA 419
consensus_7951#1 TAACCGATCATTCG-TCGGGGAGGGTGGCGTCGATACGGAGCTGG----AATTGTTGCTC 206
** ** ** * * * ** * * * ** * **** *
consensus_7951#0 GACGGGTGCTACGTAGTCCCCCGCGCGGTGCGAGAAGATGGATGAAACATGTACTACCTT 479
consensus_7951#1 GCCACACTTTGCCTGGATTCCGAC----TGCATATCGGCGACCGAAACCTTTAGAACATC 262
* * * * * * ** * *** * * ***** * ** ** *
consensus_7951#0 AAA-AACGAATTTATAGTACGCTACAGTCATGCCACACAGTCATGCAGGCACTTCTTCCA 538
consensus_7951#1 GTGCAGAGAGGACATGCTTCCCAACGGACTAGGTGAGC-GTGGTAACGACGGTGGCTGAT 321
* ** ** * * * ** * * * * ** * * * * *
consensus_7951#0 CGCGTAGAGGATAAGATAGGGGAAGAGAGAAAGAGATCATCGATCATTACTTAGCACCGT 598
consensus_7951#1 CGCGC---GGTCTGGCTGGTGCCGTACGCTTTGCACCTGGTAGAGAGTTGTTCGATCCGT 378
**** ** * * * * * * * * ** * ****
consensus_7951#0 CTTTCTAACGGGG-AGGAAACCACACAATCACGCGCATAAGTATAGCGAAGCACTTGACG 657
consensus_7951#1 TCAGTTGGTGGATCATCGAGGGACGCGGAGGCGCACGGGGTGGTGGCGGAGCATGCCGCA 438
* ** * * ** * *** * * *** **** *
consensus_7951#0 TGGAAAAGAAACGGCGTGACTGCAAACACCGGCCTACGGGAGTCAGTGGTGCTTTCGCGG 717
consensus_7951#1 TCGTTGAAATCCGTTGCTGTTGCGTACTCTGGTCGGCCGTT-TCGATCGTGGTTGGTAGA 497
* * * * ** * *** ** * ** * * * ** * *** ** *
consensus_7951#0 GCGGGGAGCAAAATAATGTAACGATATATGGCGCATTTCTTACAATGAAACATTAACAAA 777
consensus_7951#1 TCGAGCAGC----CGTTGTTTC--TGGATGCCA------TCGCCAGGGCCCATGTGCGAG 545
** * *** *** * * *** * * * * * *** * *
consensus_7951#0 ACAAAACAAAACAAAAAGAATG-GGAAAAACACTCTTAGCTGCTAAGTGTCCGCTGGGTC 836
consensus_7951#1 ATATGGTTGAAGTTAGTGGGCGCGGAGATAAGCTTCGAGCGACGATCGGT--GCTCGTGC 603
* * ** * * * *** * * ** *** * * ** *** * *
consensus_7951#0 GTCGTCGTCATCGTTCGGGCCTGTTACGCGACCGGACCGACGAGACGACGCTGACGGTCC 896
consensus_7951#1 GCGG-------------------------------------------------------- 607
* *
consensus_7951#0 CCCCTTCAGGCAGAACGTCCGTCCGCTGTGTTCCAGCGCCGAGCGGATGGTTAGCAATTT 956
consensus_7951#1 ------------------------------------------------------------
consensus_7951#0 GGTGAAGTATTTCAGGAAACATTATGAATTCAGTTGGCC 995
consensus_7951#1 ---------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||