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Anopheles gambiae
cluster # 7996 cluster # 7996       Sequences # 8       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7996#0 length = 724 sequences # 1  
consensus_7996#1 length = 697 sequences # 1  
consensus_7996#2 length = 690 sequences # 2  
consensus_7996#3 length = 688 sequences # 2  
consensus_7996#4 length = 609 sequences # 1  
consensus_7996#5 length = 417 sequences # 1  

consensusID : consensus_7996#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 724
fasta sequence
                              [GCAGAATCGGCACGAGGCGTGCTGGAGCAAAAGCTGGCCAAATGTGGGCGTTTTGTGCGAAGTGTACGGCTTGGGAAGCGCACGGAGAAGGCAAAGCCGAAGGAAGTGTGTGCAAACGATCGTGATCAACAGTTTGAGCGATTGCTAACGGACGAAGAGCGAAGCTGGATGGATGCCTATACCGCAGGGCATTCCCAACTGTCCGCCTGGCTTGGAATACCTGACAGCAGTTGATCAGCTGCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTTCACCGGGTTCGAGACGGCCAACAAGTACACGGTGAAGAACACGCTCGGGCAGAAGGTGTACTGGGCGGTGGAGGACACGACCTGCTGCACGCGCATGTGCTGCGGCCCGGACCGCCCGTTCGACATCAAGATCATGGACAACTTCCAGAACGAGGTGCTGCATCTGCGCCGCGATCTGCGCTGCAAGTCCTGCTGCTTTCCGTGCTGTCTGCAGAAGCTGGAGGTGTCGGCACCGCCCGGCAACGTGATCGGCACGGTAGTGCAGAAGTGGAGCCTCTGCCGGCCCGTCTTTGACATACGCGACCGCAACAACGAAACGGTGCTTAACGATCCGTGGCCCGGTGTGCCAGTGTCCGTGTAGCGATATCAAGTTTGCCGTGTTCACCAAGGGATGGTACGAGGTCGGTAAGGTCGACGAAAGCAGTGGACGGGCTTCGTTGGCAGGAGC]

[+] EMBL BX467324             [GCAGAATCGGCACGAGGCGTGCTGGAGCAAAAGCTGGCCAAATGTGGGCGTTTTGTGCGAAGTGTACGGCTTGGGAAGCGCACGGAGAAGGCAAAGCCGAAGGAAGTGTGTGCAAACGATCGTGATCAACAGTTTGAGCGATTGCTAACGGACGAAGAGCGAAGCTGGATGGATGCCTATACCGCAGGGCATTCCCAACTGTCCGCCTGGCTTGGAATACCTGACAGCAGTTGATCAGCTGCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTTCACCGGGTTCGAGACGGCCAACAAGTACACGGTGAAGAACACGCTCGGGCAGAAGGTGTACTGGGCGGTGGAGGACACGACCTGCTGCACGCGCATGTGCTGCGGCCCGGACCGCCCGTTCGACATCAAGATCATGGACAACTTCCAGAACGAGGTGCTGCATCTGCGCCGCGATCTGCGCTGCAAGTCCTGCTGCTTTCCGTGCTGTCTGCAGAAGCTGGAGGTGTCGGCACCGCCCGGCAACGTGATCGGCACGGTAGTGCAGAAGTGGAGCCTCTGCCGGCCCGTCTTTGACATACGCGACCGCAACAACGAAACGGTGCTTAACGATCCGTGGCCCGGTGTGCCAGTGTCCGTGTAGCGATATCAAGTTTGCCGTGTTCACCAAGGGATGGTACGAGGTCGGTAAGGTCGACGAAAGCAGTGGACGGGCTTCGTTGGCAGGAGC]


>consensus_7996#0 GCAGAATCGGCACGAGGCGTGCTGGAGCAAAAGCTGGCCAAATGTGGGCGTTTTGTGCGA AGTGTACGGCTTGGGAAGCGCACGGAGAAGGCAAAGCCGAAGGAAGTGTGTGCAAACGAT CGTGATCAACAGTTTGAGCGATTGCTAACGGACGAAGAGCGAAGCTGGATGGATGCCTAT ACCGCAGGGCATTCCCAACTGTCCGCCTGGCTTGGAATACCTGACAGCAGTTGATCAGCT GCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTTCACCGGGTTCGAGACGGCCAACAA GTACACGGTGAAGAACACGCTCGGGCAGAAGGTGTACTGGGCGGTGGAGGACACGACCTG CTGCACGCGCATGTGCTGCGGCCCGGACCGCCCGTTCGACATCAAGATCATGGACAACTT CCAGAACGAGGTGCTGCATCTGCGCCGCGATCTGCGCTGCAAGTCCTGCTGCTTTCCGTG CTGTCTGCAGAAGCTGGAGGTGTCGGCACCGCCCGGCAACGTGATCGGCACGGTAGTGCA GAAGTGGAGCCTCTGCCGGCCCGTCTTTGACATACGCGACCGCAACAACGAAACGGTGCT TAACGATCCGTGGCCCGGTGTGCCAGTGTCCGTGTAGCGATATCAAGTTTGCCGTGTTCA CCAAGGGATGGTACGAGGTCGGTAAGGTCGACGAAAGCAGTGGACGGGCTTCGTTGGCAG GAGC



consensusID : consensus_7996#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 697
fasta sequence
                              [NTTATACCGTACGCACATNGCCAGCNAAGTGTATTGCGTTACTCGAGTACAGCTGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAACTTGCGCTCATCTTGTCCGGTCCAATTACCGAGCGGGATTCAAGATAGAATCCACAGAAAGCACAAGCGCCGTAGCACCGACGCGCCCAAATCAAGGTATACGGACCAGCCGGTATACCGNTTCGGTGGGGTGGTAACCACAGACTAATTCAACCCCCTGGGAACGGGNTCACCCGTACCCCACTCTGGATGGCCCCGGANATATTGGGCAGCCCGNCACAAGATTGTACAGCACCAAATTAAACCCGTACGGGAGTTNTGTGGGTAACCAAACCCGTCANTGGATGCGCGCCNAGTAATTTCCTGGGCATANCAGCTGTCCGGTAGAAAAGGGTCAACACGGNAACACCAGAGGGTGGAGAGCCTAATNACTACAACGGAGTATCCGANAAAGTACGCCGTGCTTGGTAGAAANACATNAACATGGGCATCATGGATCACAGTGTNGATTGTATCCCCAAAAGTTGAGTTGTTGAAGCGTACAACAAGTACACCAAACGGAGCACACACAAAACCAGNGTGCACAAACANACCCNGCCACAAGCGTGTCTTGTGGCACCCTGAGC]

[+] EMBL AL929868             [NTTATACCGTACGCACATNGCCAGCNAAGTGTATTGCGTTACTCGAGTACAGCTGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAACTTGCGCTCATCTTGTCCGGTCCAATTACCGAGCGGGATTCAAGATAGAATCCACAGAAAGCACAAGCGCCGTAGCACCGACGCGCCCAAATCAAGGTATACGGACCAGCCGGTATACCGNTTCGGTGGGGTGGTAACCACAGACTAATTCAACCCCCTGGGAACGGGNTCACCCGTACCCCACTCTGGATGGCCCCGGANATATTGGGCAGCCCGNCACAAGATTGTACAGCACCAAATTAAACCCGTACGGGAGTTNTGTGGGTAACCAAACCCGTCANTGGATGCGCGCCNAGTAATTTCCTGGGCATANCAGCTGTCCGGTAGAAAAGGGTCAACACGGNAACACCAGAGGGTGGAGAGCCTAATNACTACAACGGAGTATCCGANAAAGTACGCCGTGCTTGGTAGAAANACATNAACATGGGCATCATGGATCACAGTGTNGATTGTATCCCCAAAAGTTGAGTTGTTGAAGCGTACAACAAGTACACCAAACGGAGCACACACAAAACCAGNGTGCACAAACANACCCNGCCACAAGCGTGTCTTGTGGCACCCTGAGC]


>consensus_7996#1 NTTATACCGTACGCACATNGCCAGCNAAGTGTATTGCGTTACTCGAGTACAGCTGTGAAT TGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGATAGCA GCTGCTTGTAACTTGCGCTCATCTTGTCCGGTCCAATTACCGAGCGGGATTCAAGATAGA ATCCACAGAAAGCACAAGCGCCGTAGCACCGACGCGCCCAAATCAAGGTATACGGACCAG CCGGTATACCGNTTCGGTGGGGTGGTAACCACAGACTAATTCAACCCCCTGGGAACGGGN TCACCCGTACCCCACTCTGGATGGCCCCGGANATATTGGGCAGCCCGNCACAAGATTGTA CAGCACCAAATTAAACCCGTACGGGAGTTNTGTGGGTAACCAAACCCGTCANTGGATGCG CGCCNAGTAATTTCCTGGGCATANCAGCTGTCCGGTAGAAAAGGGTCAACACGGNAACAC CAGAGGGTGGAGAGCCTAATNACTACAACGGAGTATCCGANAAAGTACGCCGTGCTTGGT AGAAANACATNAACATGGGCATCATGGATCACAGTGTNGATTGTATCCCCAAAAGTTGAG TTGTTGAAGCGTACAACAAGTACACCAAACGGAGCACACACAAAACCAGNGTGCACAAAC ANACCCNGCCACAAGCGTGTCTTGTGGCACCCTGAGC



consensusID : consensus_7996#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 690
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCACATGGCCAGTAAAGTGTGATTGCGTGCACTCGAGTAGCAGCTGTGATTTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGAGCTGCTTATAGCTGCGCTCATCTGTCCAGTCCCATTACCGAGCGGACACATTCAAGATGAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACTGGCTCACCGTACCCACCAGCTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGCTGGAAGCGTTCACCGGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACGCTCGGCCAGAAAGTGTACTGGGCGATGGAGGATACTGGCTGCTGCAAACGGAATGTGG]

[+] EMBL BM601616             [CCGCCCACGCGTCCGCCCACGCGTCCGCACATGGCCAGTAAAGTGTGATTGCGTGCACTCGAGTAGCAGCTGTGATTTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGAGCTGCTTATAGCTGCGCTCATCTGTCCAGTCCCATTACCGAGCGGACACATTCAAGATGAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACTGGCTCACCGTACCCACCAGCTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGCTGGAAGCGTTCACCGGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACGCTCGGCCAGAAAGTGTACTGGGCGATGGAGGATACTGGCTGCTGCAAACGGAATGTGG]
[+] EMBL BM594475             [                        CCGCACATGGCCAGTAAAGTGTGATTGCGTGCACTCGAGTAGCAGCTGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGAGCTGCTTATAGCTGCGCTCATCTGTCCAGTCCAATTACCGAGCGG   GATTCAAGATGAATCCACAGCAACAGCCACAAGCGCCTTACGCACCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACGGGCTCACCGTACCCACCGGCTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTGCCATTGATCAGTTGCTGGTGCACCAGAAGGTGGAGCTGCTGGAAGCGTTCACCGGCTTCGAGACGGCGAACAAGTACACGGTGAAGAACACGCTCGGCCAGAAGGTGTACT                                       ]


>consensus_7996#2 CCGCCCACGCGTCCGCCCACGCGTCCGCACATGGCCAGTAAAGTGTGATTGCGTGCACTC GAGTAGCAGCTGTGATTTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACT TCAGTCGCTCGAGCTGCTTATAGCTGCGCTCATCTGTCCAGTCCCATTACCGAGCGGACA CATTCAAGATGAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGT ACCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAG CACCCTATCCACCCCCGGGAACTGGCTCACCGTACCCACCAGCTGCCCCCGGCTATGGCC AGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGCGGCTACCAACCCGTCA TGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTG GCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTG CCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGCTGGAAGCGTTCACCGGCTTCG AGACGGCCAACAAGTACACGGTGAAGAACACGCTCGGCCAGAAAGTGTACTGGGCGATGG AGGATACTGGCTGCTGCAAACGGAATGTGG



consensusID : consensus_7996#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence
                              [CCGCTCGTACCGTACGCACATGGCCAGTGAAGTGTGATTGCGTGCACTCGAGTAGCAGCTGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAGCTGCGCTCATCTGTCCGGTCCAATTACCGAGCGGGATTCAAGATGAATCCACAGCAACAGCCACAAGCGCCGTACGCACCGTACGCGCCCCAGTATCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCCGGCTGGCTATTGGGGCTCACCGTACCCACCGGCTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGATACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGGCTGGAAGCGTTCACCGGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACTCTCGGCCAGAAGGTGTACTGGGCGATGGAGGATACCGGC]

[+] EMBL BM652046             [CCGCTCGTACCGTACGCACATGGCCAGTGAAGTGTGATTGCGTGCACTCGAGTAGCAGCTGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAGCTGCGCTCATCTGTCCGGTCCAATTACCGAGCGGGATTCAAGATGAATCCACAGCAACAGCCACAAGCGCCGTACGCACCGTACGCGCCCCAGTATCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCCGGCTGGCTATTGGGGCTCACCGTACCCACCGGCTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGATACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGGCTGGAAGCGTTCAC                                                                               ]
[+] EMBL BM633963             [                                      ccgGTGCACACGAGTAGCAGCTGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAGCTGCGCTCATCTGTCCAGTCCCATTACCGAGCGGGATTCAAGATGAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCCGACTGGCTATTGGGGCTCACCGTACCCACCGGCTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCGAATCAACCG TACAGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGTCAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGCTTGGAATACCTTACTGCCATTGATCAGTTGCTGGTGCACCAGAAGGTGGAGCT GCTGGAAGCGTTCACCGGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACTCTCGGCCAGAAGGTGTACTGGGCGATGGAGGATACCGGC]


>consensus_7996#3 CCGCTCGTACCGTACGCACATGGCCAGTGAAGTGTGATTGCGTGCACTCGAGTAGCAGCT GTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTACTTCAGTCGCTCG ATAGCAGCTGCTTGTAGCTGCGCTCATCTGTCCGGTCCAATTACCGAGCGGGATTCAAGA TGAATCCACAGCAACAGCCACAAGCGCCGTACGCACCGTACGCGCCCCAGTATCAAGGCT ATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGCGGTGGCTACCCACCAGCACCCTATC CACCCCCGGGAACGCAAAGTCCCCCGGCTGGCTATTGGGGCTCACCGTACCCACCGGCTG CCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGATACGGCGGTGGC GGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTGATGGGT CAACCGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGGC TTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGGCTGGA AGCGTTCACCGGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACTCTCGGCCAGAA GGTGTACTGGGCGATGGAGGATACCGGC



consensusID : consensus_7996#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence
                              [CCGAAGCTATACTGTGTTGTGCCTTTTTTTGTGTTCATGTGTAGGTTAGCGAGTAGGTGGTGAAACATTTTGTGTGTGCGTGTGTTTATGGGGGGCCAAATTGTGTGACCAAATTAGACTTTTTTTGTGGGAAAAATTCGAAACTTATTGACGCGAGTGCAACATTTACAAAGCTTTGTCAAGCGTGCTAAACGGGAGCGAGTGAATTCCATAAGAGCGCATTACAATGGCTGACACACCGGAAAAGGTTCCCCTGGAGGAGAAGCAGCAGCAACCGCCGGCCAACCCCTTGTACCCTACCCTCGGCCAAGAGGCGGCCAATCCATTGCTACCGCAGACCAATCCACAAGGGTATCCAATGGCACCAATGGCTACTGGACCACCAGCCCCGCCCGGTTACATGCCGGTGCCGCAGATGGCCGGCATGCCGATCATGACGCAGCCAGGCGTCATGCAGATGCAGCCCGTGCTCGGTCAGCAGCAAGTCACTGGATGGATGCCTATACCGCAGGGCATTCCCAACTGTCCGCCTGGCTTGGAATACCTGACAGCAGTTGATCAGCTGCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTTCACCGGGTT]

[+] EMBL BM649839             [CCGAAGCTATACTGTGTTGTGCCTTTTTTTGTGTTCATGTGTAGGTTAGCGAGTAGGTGGTGAAACATTTTGTGTGTGCGTGTGTTTATGGGGGGCCAAATTGTGTGACCAAATTAGACTTTTTTTGTGGGAAAAATTCGAAACTTATTGACGCGAGTGCAACATTTACAAAGCTTTGTCAAGCGTGCTAAACGGGAGCGAGTGAATTCCATAAGAGCGCATTACAATGGCTGACACACCGGAAAAGGTTCCCCTGGAGGAGAAGCAGCAGCAACCGCCGGCCAACCCCTTGTACCCTACCCTCGGCCAAGAGGCGGCCAATCCATTGCTACCGCAGACCAATCCACAAGGGTATCCAATGGCACCAATGGCTACTGGACCACCAGCCCCGCCCGGTTACATGCCGGTGCCGCAGATGGCCGGCATGCCGATCATGACGCAGCCAGGCGTCATGCAGATGCAGCCCGTGCTCGGTCAGCAGCAAGTCACTGGATGGATGCCTATACCGCAGGGCATTCCCAACTGTCCGCCTGGCTTGGAATACCTGACAGCAGTTGATCAGCTGCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTTCACCGGGTT]


>consensus_7996#4 CCGAAGCTATACTGTGTTGTGCCTTTTTTTGTGTTCATGTGTAGGTTAGCGAGTAGGTGG TGAAACATTTTGTGTGTGCGTGTGTTTATGGGGGGCCAAATTGTGTGACCAAATTAGACT TTTTTTGTGGGAAAAATTCGAAACTTATTGACGCGAGTGCAACATTTACAAAGCTTTGTC AAGCGTGCTAAACGGGAGCGAGTGAATTCCATAAGAGCGCATTACAATGGCTGACACACC GGAAAAGGTTCCCCTGGAGGAGAAGCAGCAGCAACCGCCGGCCAACCCCTTGTACCCTAC CCTCGGCCAAGAGGCGGCCAATCCATTGCTACCGCAGACCAATCCACAAGGGTATCCAAT GGCACCAATGGCTACTGGACCACCAGCCCCGCCCGGTTACATGCCGGTGCCGCAGATGGC CGGCATGCCGATCATGACGCAGCCAGGCGTCATGCAGATGCAGCCCGTGCTCGGTCAGCA GCAAGTCACTGGATGGATGCCTATACCGCAGGGCATTCCCAACTGTCCGCCTGGCTTGGA ATACCTGACAGCAGTTGATCAGCTGCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTT CACCGGGTT



consensusID : consensus_7996#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 417
fasta sequence
                              [TTTTTTWTTTTTTTTTTTTTTTTTTTTCTGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAGCTGCGCTCATCTGTCCAGTCCAATTACCGAGCGGACACACATTCAAGATGAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCCCCGGCCGGTGGCGGTTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCAGGCTGGCTATTGGGGCTCACCGTACCCACCGGTTTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTAATG]

[+] EMBL AGA281349            [TTTTTTWTTTTTTTTTTTTTTTTTTTTCTGTTTTAAAGCTACTTCAGTCGCTCGATAGCAGCTGCTTGTAGCTGCGCTCATCTGTCCAGTCCAATTACCGAGCGGACACACATTCAAGATGAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCCCCGGCCGGTGGCGGTTGGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCAGGCTGGCTATTGGGGCTCACCGTACCCACCGGTTTGCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGCGGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTAATG]


>consensus_7996#5 TTTTTTWTTTTTTTTTTTTTTTTTTTTCTGTTTTAAAGCTACTTCAGTCGCTCGATAGCA GCTGCTTGTAGCTGCGCTCATCTGTCCAGTCCAATTACCGAGCGGACACACATTCAAGAT GAATCCACAGCAACAGCCACAAGCACCGTACGCACCGTACGCGCCCCAGTACCAAGGCTA TACGGACCAGCCCGGCTATCCCCCGGCCGGTGGCGGTTGGCTACCCACCAGCACCCTATC CACCCCCGGGAACGCAAAGTCCCCAGGCTGGCTATTGGGGCTCACCGTACCCACCGGTTT GCCCCCGGCTATGGCCAGCCGCCACAGATGTACGCACCAAATCAACCGTACGGCGGTGGC GGCTACCAACCCGTCATGGTGCAGCCAGGAATGCCTGGCCATCCACCGCCGGTAATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7996#3      -----------CCGCTCGTACCGTACGCACATGGCCAGTGAAGTGTGATTGCGTGCACTC 49
consensus_7996#5      ------------------------------------------------------------
consensus_7996#2      CCGCCCACGCGTCCGCCCACGCGTCCGCACATGGCCAGTAAAGTGTGATTGCGTGCACTC 60
consensus_7996#1      --------------NTTATACCGTACGCACATNGCCAGCNAAGTGT-ATTGCGT-TACTC 44
consensus_7996#0      ------GCAGAATCGGCACGAGGCGTGC-TGGAGCAAAAGCTGGCCAAATGTGGGCGTTT 53
consensus_7996#4      ----------------------------------CCGAAGCTATACTGTGTTGTGCCTTT 26
                                                                                  

consensus_7996#3      GAGTAGCAGC-TGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTAC 108
consensus_7996#5      ------------------TTTTTTWTTTTTTTTTTTTTTTTTTTTCTGTTTTAAAGCTAC 42
consensus_7996#2      GAGTAGCAGC-TGTGATTTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTAC 119
consensus_7996#1      GAGTA-CAGC-TGTGAATTGCAGCAGTTATATCTTCCAGGTTTTTCAGTTTTAAAGCTAC 102
consensus_7996#0      T-GTGCGAAG-TGTACGGCTTGGGAAGCGCACGGAGAAGGCAAAGCCGAAGGAAGTGTG- 110
consensus_7996#4      TTTTGTGTTCATGTGTAGGTTAGCGAGTAGGTGGTGAAACATTTTGTGTGTGCGTGTGTT 86
                                                                     *            

consensus_7996#3      TTCAGTCGCTCGATAGCAGCTGCTTG--TAGCT-GCGCTCATCT-GTCCGGTCCAA--TT 162
consensus_7996#5      TTCAGTCGCTCGATAGCAGCTGCTTG--TAGCT-GCGCTCATCT-GTCCAGTCCAA--TT 96
consensus_7996#2      TTCAGTCGCTCGA-----GCTGCTTA--TAGCT-GCGCTCATCT-GTCCAGTCCCA--TT 168
consensus_7996#1      TTCAGTCGCTCGATAGCAGCTGCTTG--TAACTTGCGCTCATCTTGTCCGGTCCAA--TT 158
consensus_7996#0      TGCAAACGATCGTGATCAACAGTTTG---AGCGATTGCTAACGG-ACGAAGAGCGA--A- 163
consensus_7996#4      TATGGGGGGCCAAATTGTGTGACCAAATTAGACTTTTTTTGTGGGAAAAATTCGAAACTT 146
                      *      *  *                  *        *                *    

consensus_7996#3      ACCGA-GCGGG-----ATTCAAGAT-GAATCCACAGCAACAGCCACAAGCGCCGTACGCA 215
consensus_7996#5      ACCGA-GCGGACACACATTCAAGAT-GAATCCACAGCAACAGCCACAAGCACCGTACGCA 154
consensus_7996#2      ACCGA-GCGGACAC--ATTCAAGAT-GAATCCACAGCAACAGCCACAAGCACCGTACGCA 224
consensus_7996#1      ACCGA-GCGGG-----ATTCAAGATAGAATCCACAGAAAG---CACAAGCGCCGTA-GCA 208
consensus_7996#0      GCTGG-ATGGATGCCTATACCGCAGGGCATTCCCAACTGT--CCGCCTGGCTTGGA-ATA 219
consensus_7996#4      ATTGACGCGAGTGCAACATTTACAAAGCTTTGTCAAGCGTGCTAAACGGGAGCGAGTGAA 206
                         *    *              *  *  *   **             *    *     *

consensus_7996#3      CCGTACGCGCCCCAGTATCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGC 275
consensus_7996#5      CCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCCCCGGCCGGTGGC 214
consensus_7996#2      CCGTACGCGCCCCAGTACCAAGGCTATACGGACCAGCCCGGCTATCCGCCGGCCGGTGGC 284
consensus_7996#1      CCG-ACGCGCCCAA--ATCAAGG-TATACGGACCAGCCGGTATACCGNTTCGGTGG-GGT 263
consensus_7996#0      CCTGACAGCAGTTG--ATCAGCTGCTGGTGCACCAGCAGGTCGAGCTGCTGGAAGCCTTC 277
consensus_7996#4      TTCCATAAGAGCGCATTACAATGGCTGACACACCGGAAAAGGTTCCCCTGGAGGAGAAGC 266
                          *             **           *** *         *              

consensus_7996#3      GGT---GGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCCGGCTGGC 332
consensus_7996#5      GGTT--GGCTACCCACCAGCACCCTATCCACCCCCGGGAACGCAAAGTCCCCAGGCTGGC 272
consensus_7996#2      GGT---GGCTACCCACCAGCACCCTATCCACCCCCGGGAACT------------------ 323
consensus_7996#1      GGT---AACCACAGACTA--ATTCAACCC---CCTGGGAACG------------------ 297
consensus_7996#0      ACCG--GGTTCGAGACGGCCAACAAGTACACGGTGAAGAACACG--CTCGGGCAGAAGGT 333
consensus_7996#4      AGCAGCAACCGCCGGCCAACCCCTTGTACCCTACCCTCGGCCAAGAGGCGGCCAATCCAT 326
                                     *            *           *                   

consensus_7996#3      TATTGGGGCTCACC-GTACCCA---CCGGCT-GCCCCCGGC-TAT--GGCCAGCCGCCAC 384
consensus_7996#5      TATTGGGGCTCACC-GTACCCA---CCGGTTTGCCCCCGGC-TAT--GGCCAGCCGCCAC 325
consensus_7996#2      ------GGCTCACC-GTACCCA---CCAGCT-GCCCCCGGC-TAT--GGCCAGCCGCCAC 369
consensus_7996#1      ------GGNTCACCCGTACCCCACTCTGGATGGCCCCGGANATATTGGGCAGCCCGNCAC 351
consensus_7996#0      GTACTGGGCGGTGGAGGACACGA--CCTGCT-GCACGCG-CATGTGCTGCGGCCCGGACC 389
consensus_7996#4      TGCTACCGCAGACCAATCCACAA----GGGTATCCAATGGCACCAATGGCTA-CTGGACC 381
                             *          * *       * *  *    *         **   * *   *

consensus_7996#3      AGA--TGTAC-GCACCAAATCAA-CCGATACGGCGGTGGCG---GCTACCAA-CCCGTCA 436
consensus_7996#5      AGA--TGTAC-GCACCAAATCAA-CCG-TACGGCGGTGGCG---GCTACCAA-CCCGTCA 376
consensus_7996#2      AGA--TGTAC-GCACCAAATCAA-CCG-TACGGCGGTGGCG---GCTACCAA-CCCGTCA 420
consensus_7996#1      AAGATTGTACAGCACCAAATTAAACCCGTACGGGAGTTNTGTGGGTAACCAAACCCGTCA 411
consensus_7996#0      GCC--CGTTCGACATCAAGATCATGGACAACTTCCAGAACGAGGTGCTGCATCTGCGCCG 447
consensus_7996#4      ACC--AGCCC--CGCCCGGTTACATGCCGGTGCCGCAGATG---GCCGGCATGCCGATCA 434
                            *  *  *  *                        *        **       * 

consensus_7996#3      TGG----TGCAGCCAGGAATG--CCTGGCCAT-CCA-----CCGCCGGTGATGG-GTCAA 483
consensus_7996#5      TGG----TGCAGCCAGGAATG--CCTGGCCAT-CCA-----CCGCCGGTAATG------- 417
consensus_7996#2      TGG----TGCAGCCAGGAATG--CCTGGCCAT-CCA-----CCGCCGGTGATGG-GTCAA 467
consensus_7996#1      NTGGATGCGCGCCNAGTAATTT-CCTGGGCATANCAGCTGTCCGGTAGAAAAGG-GTCAA 469
consensus_7996#0      CGATCTGCGCTGCAAGTCCTGCTGCTTTCCGTGCTGTCTG-CAGAAGCTGGAGGTGTCGG 506
consensus_7996#4      TGA----CGCAGCCAGGCGT---------CATGCAGAT--GCAGCCCGTGCTCG-GTCAG 478
                              **  * **   *         * *         * *                

consensus_7996#3      C----CGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGG 539
consensus_7996#5      ------------------------------------------------------------
consensus_7996#2      C----CGGTACCAGGTGGCTGGATGCCTATTCCTCAAGGGATACCGAACTGTCCGCCCGG 523
consensus_7996#1      CACGGNAACACCAGAGGGTGGAGAGCCTAATNACTACAACGGAGTATCCGANAAAGTACG 529
consensus_7996#0      CACCGCCCGGCAACGTGATCGGCACGGTAGTGCAGAAGTGGAGCC--TCTGCCGGCCCGT 564
consensus_7996#4      CA---GCAAGTCAC-TGGATGGATGCCTATACCGCAGGGCATTCCCAACTGTCCGCCTGG 534
                                                                                  

consensus_7996#3      CTTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTGGCTGG 599
consensus_7996#5      ------------------------------------------------------------
consensus_7996#2      CTTGGAATACCTTACTGCCATTGATCAGCTGCTGGTGCACCAGAAGGTGGAGCTG-CTGG 582
consensus_7996#1      CCGTGCTTGGTAGAAANACATNAACATGGGCATCATGGATCACAGTGTNGATTGTATCCC 589
consensus_7996#0      CTTTGACATACGCGACCGCAACAACGAAACGGTGCTTAACGATC-CGTGGCCCGGTGTGC 623
consensus_7996#4      CTTGGAATACCTGACAGCAGTTGATCAGCTGCTGGTGCACCAGCAGGTCGAGCTG-CTGG 593
                                                                                  

consensus_7996#3      AAGCGTTCACC-GGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACTCTCGGCCAG 658
consensus_7996#5      ------------------------------------------------------------
consensus_7996#2      AAGCGTTCACC-GGCTTCGAGACGGCCAACAAGTACACGGTGAAGAACACGCTCGGCCAG 641
consensus_7996#1      CAAAAGTTGA--GTTGTTGAAGCGTACAACAAGTACACCAAACGGAGCACACACAAAACC 647
consensus_7996#0      CAGTGTCCGTGTAGCGATATCAAGTTTGCCGTGTTCACCAAG-GGATGGTACGAGGTCGG 682
consensus_7996#4      AAGCCTTCACCGGGTT-------------------------------------------- 609
                                                                                  

consensus_7996#3      AAGGTGTACTGGGCGATGGAGGATACCGGC--------------------- 688
consensus_7996#5      ---------------------------------------------------
consensus_7996#2      AAAGTGTACTGGGCGATGGAGGATACTGGCTGCTGCAAACGGAATGTGG-- 690
consensus_7996#1      AGNGTGCAC-AAACANACCCNGCCACAAGCGTGTCTTGTGGCACCCTGAGC 697
consensus_7996#0      TAAG---GTCGACGAAAGCAGTGGACGGGCTTCGTTGGCAGGAGC------ 724
consensus_7996#4      ---------------------------------------------------
                                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)