Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8009 cluster # 8009       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8009#0 length = 710 sequences # 4  
consensus_8009#1 length = 672 sequences # 1  
consensus_8009#2 length = 651 sequences # 1  
consensus_8009#3 length = 642 sequences # 1  
consensus_8009#4 length = 633 sequences # 1  

consensusID : consensus_8009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 710
fasta sequence
                              [CCGCCCACGCGTCCGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTT-CCGGGTGGTGGT-GCTGACGCTGGCCCCGCCCGCCGAGCAGCG-CCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTG-ATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAAGTCTCGTTACGTGCGTGGACGAGACGCGCCACGGGTTCGAGGATGGCGATTATGTTAC]

[+] EMBL BM596403             [CCGCCCACGCGTCCGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTT CCGGGTGGTGGT GCTGACGCTGGCCCCGCCCGCCGAGCAGCG CCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTG ATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAG                                                                              ]
[+] EMBL BM600124             [            CCGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTT CCGGGTGGTGGTGGCTGACGCTGGCCCCGCCCGCCGAGCAGCGCCCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTGTATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTtcg                                                                                           ]
[+] EMBL BM647121             [                 ccgGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTTCCCGGGTGGTGGTGGCTGACGCTGGCCCCGCCCGCCGAGCAGCG CCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTG ATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAAGTCTCGTTACGTGCGTGGACGAGACGCGCCACGGGTTCGAGGATGGCGATTATGTTAC]
[+] EMBL BM633948             [                    ccgCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCT   CGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTT CCGGGTGGTGGT GCTGACGCTGGCCCCGCCCGCCGAGCAGCG CCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTG ATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAG                                                                              ]


>consensus_8009#0 CCGCCCACGCGTCCGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAG AACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTG TACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGAC GTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGC GGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCC CAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGC CAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACC GAGGAGTTTCTGCAGAAGTTCCGGGTGGTGGTGCTGACGCTGGCCCCGCCCGCCGAGCAG CGCCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTGATCGTGGCGGATACGCGC GGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAAT GGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAAGTCTCGTT ACGTGCGTGGACGAGACGCGCCACGGGTTCGAGGATGGCGATTATGTTAC



consensusID : consensus_8009#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [CCGCCCACGCGTCCGCCTGAACGTGTTAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGAGCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCACGGAACCTCCTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGCAGCCGCTGCAGTAGTAGTAAATGGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCCGGGGGAA]

[+] EMBL BM580398             [CCGCCCACGCGTCCGCCTGAACGTGTTAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGAGCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCACGGAACCTCCTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGCAGCCGCTGCAGTAGTAGTAAATGGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAGCGCCCGGGGGAA]


>consensus_8009#1 CCGCCCACGCGTCCGCCTGAACGTGTTAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGA GCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTG AGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTCA ATCATCTTCCATCCTCCCCACGGAACCTCCTCCCGCAGAAGGACGCTTCATCTTCAACCC CATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAG AGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGC GCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTG GTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGC CGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATT CGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGCAGCCGCTGCAGTAGTAG TAAATGGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGAACAACAG CGCCCGGGGGAA



consensusID : consensus_8009#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [CCGGCAGCACCAGAGGACAGACAGGAGCCGGTACGCGCGCGTGTGTGTGGGTTGGCCTGAACGTGTTAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGAGCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCACGGAACCTCCTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGCAGCCGCTGCAGTAGTAGTAATGGCGACG]

[+] EMBL BM590679             [CCGGCAGCACCAGAGGACAGACAGGAGCCGGTACGCGCGCGTGTGTGTGGGTTGGCCTGAACGTGTTAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGAGCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCACGGAACCTCCTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGCAGCCGCTGCAGTAGTAGTAATGGCGACG]


>consensus_8009#2 CCGGCAGCACCAGAGGACAGACAGGAGCCGGTACGCGCGCGTGTGTGTGGGTTGGCCTGA ACGTGTTAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGAGCAATCGTAGTTAAGGAAGA GGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCA GCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCA CGGAACCTCCTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTA TCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCG AGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGT CTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTG GTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAG CCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAG CGCTCTGCACCATCGTCGGCCGCAGCCGCTGCAGTAGTAGTAATGGCGACG



consensusID : consensus_8009#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence
                              [CCGCAATCGGCCCCGTCGCGTGTGTGTAGGCTCTTCCCGTCCGAAACGACCGATGTCGGACGATGTTGCATTGATAGGATCGCGAGCAAAGCAGCAGTGCAGTGCAAAGGTGGACAATATCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCTTAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCACGGAACCTCTTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGC]

[+] EMBL BM582356             [CCGCAATCGGCCCCGTCGCGTGTGTGTAGGCTCTTCCCGTCCGAAACGACCGATGTCGGACGATGTTGCATTGATAGGATCGCGAGCAAAGCAGCAGTGCAGTGCAAAGGTGGACAATATCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGAGTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCTTAGCAGGACCGAATTGTAACCTCAATCATCTTCCATCCTCCCCACGGAACCTCTTCCCGCAGAAGGACGCTTCATCTTCAACCCCATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGC]


>consensus_8009#3 CCGCAATCGGCCCCGTCGCGTGTGTGTAGGCTCTTCCCGTCCGAAACGACCGATGTCGGA CGATGTTGCATTGATAGGATCGCGAGCAAAGCAGCAGTGCAGTGCAAAGGTGGACAATAT CAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTGA GTGCGATTCAGCAGCAGCAGCTTTTCGTCCGGTCTTAGCAGGACCGAATTGTAACCTCAA TCATCTTCCATCCTCCCCACGGAACCTCTTCCCGCAGAAGGACGCTTCATCTTCAACCCC ATCGCACACCCCCTCGGTATCCACGAGTGTGTAAAAACACTGTGGTCGTCGGTGTAAAGA GAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGAATCATCATCTCCGCG CACCCCCAGACACCTCCGTCTCCGTCACGGACGCACCCGGTTTGGCTTAATGTCTAGTGG TGAGTTTCGTGACAGCTTGGTCGATCCCCCAGCCGCCAAAAAGCGGAAGCTGCCATCGCC GACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAGCAGCCGTCGCAGCCGCCGCATTC GTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCGGCCGC



consensusID : consensus_8009#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 633
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTTCCGGGTGGTGGTGGCTGACGCTGGCCCCGCCCGCCGAGCAGCGCCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTGATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAA]

[+] EMBL BM622388             [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGGTGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTTCCGGGTGGTGGTGGCTGACGCTGGCCCCGCCCGCCGAGCAGCGCCGTGTGGCGGAGATTACGCACCGCCACAACATTGCGCTGATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAA]


>consensus_8009#4 CCGCCCACGCGTCCGCCCACGCGTCCGGCCGTCCGTGGAGAACAACAGCGCCGGGGGAGG TGGCGGCGGCGGCGGTGCCCAGGAAATCGACGAGGGGCTGTACTCGCGCCAGCTGTACGT GCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTCGGACGTGCTGATTTCCGGGCTCGG CGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCTGGGCGGCGTGAAATCTGTCACGCT GCATGACACGGCAGTCTGCACGGTCGGCGACCTGTCGTCCCAGTTCTATCTGACCGCGGA GGATGTGGCGGGCGGGCGCAACCGGGCCGAGGCGAGCTGCCAGCAGCTGTCCGAGCTGAA CCACTACGTCCCGACCGTCGCCTACACGGGCGAGCTGACCGAGGAGTTTCTGCAGAAGTT CCGGGTGGTGGTGGCTGACGCTGGCCCCGCCCGCCGAGCAGCGCCGTGTGGCGGAGATTA CGCACCGCCACAACATTGCGCTGATCGTGGCGGATACGCGCGGCCTGTTCGCCCAGGTGT TCTGCGACTTTGGCGTCGACTTCACCGTGTACGACCAGAATGGGGCCAACCCGAGCTCGG CCATGGTGGCCAGCATTACGAACGACGCGGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8009#1      -----------------------------------------------------------C 1
consensus_8009#2      -------------------CCGGCAGCACCAGAGGACAGACAGGAGCCGGTACGCGCGCG 41
consensus_8009#3      CCGCAATCGGCCCCGTCGCGTGTGTGTAGGCTCTTCCCGTCCGAAACGACCGATGTCGGA 60
consensus_8009#0      -----------------------------------------------------------C 1
consensus_8009#4      -----------------------------------------------------------C 1
                                                                                  

consensus_8009#1      CGCCCACGCGTCCGCCTGAACGTGT-TAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGA 60
consensus_8009#2      TGTGTGTGGGTTGGCCTGAACGTGT-TAGAACGCTGTTAGGGGCAAAAAGTATGTTCTGA 100
consensus_8009#3      CGATGTTGCATTGATAGGATCGCGAGCAAAGCAGCAGTGCAGTGCAAAGGTGGACAAT-A 119
consensus_8009#0      CGCCCACGCGTCCGGCGACGTCCAATAACAATGGCTCCGCTCCCGTGCCGTCCGTGGAGA 61
consensus_8009#4      CGCCCACGCGTCCGCCCACG-------------------CGTCCG-GCCGTCCGTGGAGA 41
                       *     *  *                                      **        *

consensus_8009#1      GCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTG 120
consensus_8009#2      GCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTG 160
consensus_8009#3      TCAATCGTAGTTAAGGAAGAGGGTAGCCGTTAGCAACGCGCAAAAACCGCACGCCAAGTG 179
consensus_8009#0      ACAACAGC-GCCGGGGGAGGTGGCGGC-GGCGGCGGTGCCCAGGAAAT---CGACGAGGG 116
consensus_8009#4      ACAACAGC-GCCGGGGGAGGTGGCGGC-GGCGGCGGTGCCCAGGAAAT---CGACGAGGG 96
                       ***  *  *    ** **  **  ** *   **   ** **  **     ** * ** *

consensus_8009#1      AGTGCGATT-CAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTC 179
consensus_8009#2      AGTGCGATT-CAGCAGCAGCAGCTTTTCGTCCGGTCGAAGCAGGACCGAATTGTAACCTC 219
consensus_8009#3      AGTGCGATT-CAGCAGCAGCAGCTTTTCGTCCGGTCTTAGCAGGACCGAATTGTAACCTC 238
consensus_8009#0      GCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTC 176
consensus_8009#4      GCTGTACTCGCGCCAGCTGTACGTGCTCGGCCACGACGCGATGCGCCGGATGGCCCGGTC 156
                        **   *  *  **** * *  *  *** **       *  *  *** ** *     **

consensus_8009#1      AATCATCTTCCATCCTCCCCACGG-AACCTCCTCCCGCAGAAGG----ACGCTTCATCTT 234
consensus_8009#2      AATCATCTTCCATCCTCCCCACGG-AACCTCCTCCCGCAGAAGG----ACGCTTCATCTT 274
consensus_8009#3      AATCATCTTCCATCCTCCCCACGG-AACCTCTTCCCGCAGAAGG----ACGCTTCATCTT 293
consensus_8009#0      GGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCT 236
consensus_8009#4      GGACGTGCTGATTTCCGGGCTCGGCGGGCTCGGCGTGGAGGTGGCGAAGAACGTGATCCT 216
                         * *  *   * *    * ***    ***  *  * **  **       * * *** *

consensus_8009#1      CAACCCCATCGCACACCCC-CTCGGTATC-CACG--AGTGTGTAAAAACACTG--TGGTC 288
consensus_8009#2      CAACCCCATCGCACACCCC-CTCGGTATC-CACG--AGTGTGTAAAAACACTG--TGGTC 328
consensus_8009#3      CAACCCCATCGCACACCCC-CTCGGTATC-CACG--AGTGTGTAAAAACACTG--TGGTC 347
consensus_8009#0      GGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTC 296
consensus_8009#4      GGGCGGCGTGAAATCTGTCACGCTGCATGACACGGCAGTCTGCACGGTCGGCGACCTGTC 276
                         *  * *   *     * * * * **  ****  *** ** *    *   *    ***

consensus_8009#1      GTC--GGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGA 346
consensus_8009#2      GTC--GGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGA 386
consensus_8009#3      GTC--GGTGTAAAGAGAAGGAAAAAATCCCAGCGAGGAAGAGAGGGCGACCGCAAACAGA 405
consensus_8009#0      GTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGC-CGAGGCGA 355
consensus_8009#4      GTCCCAGTTCTATCTGACCGCGGAGGATGTGGCGGGCGGGCGCAACCGGGC-CGAGGCGA 335
                      ***   **   *   **  *   *       *** *   * *    **  * * *   **

consensus_8009#1      ATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTC---CGTCACGGACGCACCCGGTT 403
consensus_8009#2      ATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTC---CGTCACGGACGCACCCGGTT 443
consensus_8009#3      ATCATCATCTCCGCGCACCCCCAGACACCTCCGTCTC---CGTCACGGACGCACCCGGTT 462
consensus_8009#0      GCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGC 415
consensus_8009#4      GCTGCCAGCAGCTGTCCGAGCTGAACCACTACGTCCCGACCGTCGCCTACACGGGCGAGC 395
                           ** *  *   *    *   **  ** **** *   **** *  ** *   **   

consensus_8009#1      TGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCT-TGGTCGATCC----CCCAGCCGCC 458
consensus_8009#2      TGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCT-TGGTCGATCC----CCCAGCCGCC 498
consensus_8009#3      TGGCTTAATGTCTAGTGGTGAGTTTCGTGACAGCT-TGGTCGATCC----CCCAGCCGCC 517
consensus_8009#0      TGACCGAGGAGTTTCTGCAGAAGTTCCGGGTGGTGGTG-CTGACGCTGGCCCCGCCCGCC 474
consensus_8009#4      TGACCGAGGAGTTTCTGCAGAAGTTCCGGGTGGTGGTGGCTGACGCTGGCCCCGCCCGCC 455
                      ** *  *     *  **  **  ***  *   *   **   **  *    ***  *****

consensus_8009#1      AAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAG 518
consensus_8009#2      AAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAG 558
consensus_8009#3      AAAAAGCGGAAGCTGCCATCGCCGACGCCGTCGCTGACACAGCCGCCCGAGCACGAGCAG 577
consensus_8009#0      GAGCAGCGCCGTGTGGCGGAGATTACGC-ACCGCCACAACATTGCGCTGATCGTGGCGGA 533
consensus_8009#4      GAGCAGCGCCGTGTGGCGGAGATTACGC-ACCGCCACAACATTGCGCTGATCGTGGCGGA 514
                       *  ****     ** *   *   ****   ***    ***     * ** *  *     

consensus_8009#1      CAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCG 578
consensus_8009#2      CAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCG 618
consensus_8009#3      CAGCCGTCGCAGCCGCCGCATTCGTCATCGCCCGCGATTGAGCGCTCTGCACCATCGTCG 637
consensus_8009#0      TACGCGCGGCC-TGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACG 592
consensus_8009#4      TACGCGCGGCC-TGTTCGCCCAGGTGTTCTGCGACTTTGGCGTCGACTTCACCGTGTACG 573
                       *  **  **      ***    **  **  *  *  * * *    ** **** *   **

consensus_8009#1      GCCGCAGCCGCTGCAGTAGTAGTAAATGGGCGACGTCCAATAACAATGGCTCCGCTCCCG 638
consensus_8009#2      GCCGCAGCCGCTGCAGTAGTAGTAAT--GGCGACG------------------------- 651
consensus_8009#3      GCCGC------------------------------------------------------- 642
consensus_8009#0      ACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAA 652
consensus_8009#4      ACCAGAATGGGGCCAACCCGAGCTCGGCCATGGTGGCCAGCATTACGAACGACGCGGAAA 633
                       **                                                         

consensus_8009#1      TGCCGTCCGTGGAGAACAACAGCGCCCGGGGGAA------------------------ 672
consensus_8009#2      ----------------------------------------------------------
consensus_8009#3      ----------------------------------------------------------
consensus_8009#0      GTCTCGTTACGTGCGTGGACGAGACGCGCCACGGGTTCGAGGATGGCGATTATGTTAC 710
consensus_8009#4      ----------------------------------------------------------
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)