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Anopheles gambiae
cluster # 8013 cluster # 8013       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8013#0 length = 1058 sequences # 6  
consensus_8013#1 length = 706 sequences # 1  
consensus_8013#2 length = 571 sequences # 1  
consensus_8013#3 length = 358 sequences # 1  

consensusID : consensus_8013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1058
fasta sequence
                              [CCGCGGACGCGTGGGCGCGCGGTTCGCGTAACGGGTTA-CCGACCACATCTCTCTCGCTTTGTGGGGTGTGTTGCTTATTATTGCTAACAGCTGTGCGTGTCTCTATTTCGCGACTGTGGTATGATCGATTGTTTCGATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTGTGTGCTGTAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAACCCCTGGCGTTGTTAGCACGCCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCAACGCTGCACGCTTGTTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACCGTAGCCCTATGTGATATTAGCTCGGTGCAGCGCAACTTCCCACCAGACACTGCTGCACATATAGCATTGAGGACTGTTCGTCGTTTTCTGGAGCAATACCTGTGCCGAGATT]

[+] EMBL BM577985             [CCGCGGACGCGTGGGCGCGCGGTTCGCGTAACGGGTTACCCGACCACATCTCTCTCGCTTTGTGGGGTGTGTTGCTTATTATTGCTAACAGCTGTGCGTGTCTCTATTTCGCGACTGTGGTATGATCGATTGTTTCGATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTGTGTGCTGTAGAAGCCCTCGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAACCCCTGGCGTTGTTGGCACGCCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGT                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08SHU             [                          gGTAACGGGTTA CCGACCACATCTCTCTCGCTTTGTGGGGTGTGTTGCTTATTATTGCTAACAGCTGTGCGTGTCTCTATTTCGCGACTGTGGTATGATCGATTGTTTCGATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTGTGTGCTGTAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAACCCCTGGCGTTGTTAGCACGCCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCAACGCTGCACGCTTGTTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACCGTAGCCCTATGTGATATTAGCTCGGTGCAGCGCAACTT CCAAAAAAAACTGCTGCACATATAGCATTGAGGACTGTTCGTCGTTTTC                        ]
[-] EMBL CNS08SHV             [                                                                                                 GTTTCTCTTTTTCGCCACTGTGGTATGATCGATTGTTTCGATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTTTGTGCTGTAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTGGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAACCCCTGGCGTTGTTAGCACGCCGCAAAAATCGCGAGAACTGCCGAACCATTCTACTCGCCAGCAGCAGCAGCGACAGCAGCAGCAGCAGCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACTTCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGG CGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGACGTGAGAAGATGTAAAACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCAACGCTGCACGCTTGTTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACCGTAGCCCTATGTGATATTAGCTCGGTGCAGCGCAACTTCCCACCAGACACTGCTGCACATATAGCATTGAGGACTGTTCGTCGTTTTCTGGAGCAATACCT           ]
[-] EMBL CNS08DC2             [                                                                                                                                                                    TAAAAATTTGTGTGCTGTAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAACCCCTGGCGTTGTTAGCACGCCGCAAGAATCGCGAGAACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGG CGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGACGTGAGAAGATGTAAGGCTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCAACGCTGCACGCTTGTTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACCGTAGCCCTATGTGATATTAGCTCGGTGCAGCGCAACTTCCCACCAGACACTGCTGCACATATAGCATTGAGGACTGTTCGTCGTTTTCTGGAGCAAT               ]
[+] EMBL CNS08DC1             [                                                                                                                                                                                   TGTAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTTATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAACCCCTGGCGTTGTTAGCACGCCGCAAGATTCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGACGTGAGAAGATGTAAGGCTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCAACGCTGC                                                                                                                                                                     ]
[+] EMBL BM643783             [                                                                                                                                                                                                                                                                                                                                                                                                                        ccgCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTGCACGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAATACAGGACTGCTTCGGAAGCAACGCTGCACGCTTGTTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACCGTAGCCCTATGTGATATTAGCTCGGTGCAGCGCAACTTCCCACCAGACACTGCTGCACACATAGCATTGAGGACTGTTCGTCGTTTTCTGGAGCAATACCCGTGCCGAGATT]


>consensus_8013#0 CCGCGGACGCGTGGGCGCGCGGTTCGCGTAACGGGTTACCGACCACATCTCTCTCGCTTT GTGGGGTGTGTTGCTTATTATTGCTAACAGCTGTGCGTGTCTCTATTTCGCGACTGTGGT ATGATCGATTGTTTCGATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTGTGTGCTG TAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTA ATATTGTTCCCCGAGCAAGGGGAATCAATTAATGCGTTATCGGCAGTGAGACGAACATAC CTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCCCGCCGGAGTTCAAC CCCTGGCGTTGTTAGCACGCCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCA GCAGCAGCAGCAACAGCAGCAGCAGCAGCACCACTTTGTCACTCTAGGCAGTCTAAAGCG CTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAG CCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACTCCGTTTCCGTGCGA TGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGA TGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAAT CTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGACGTGAGAAGATGTAA GACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACAC CGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCAACGCTGCACGCTTG TTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACCGTAGCCCTATGTGA TATTAGCTCGGTGCAGCGCAACTTCCCACCAGACACTGCTGCACATATAGCATTGAGGAC TGTTCGTCGTTTTCTGGAGCAATACCTGTGCCGAGATT



consensusID : consensus_8013#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence
                              [CCGGACCAGCAAACCGATGACAACGACTTGGTATGCCGCGACCTGCACGCCGTACTGGGCCGTTTTCTTTTAGCCAGTTTTCTTGCAACCTACCTGCCGCGCGGTTCGCGTAACGGGTTACCCGACCACATCTCTCTCGCTTTGTGGGAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACATCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTGCACGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAG]

[+] EMBL BM638284             [CCGGACCAGCAAACCGATGACAACGACTTGGTATGCCGCGACCTGCACGCCGTACTGGGCCGTTTTCTTTTAGCCAGTTTTCTTGCAACCTACCTGCCGCGCGGTTCGCGTAACGGGTTACCCGACCACATCTCTCTCGCTTTGTGGGAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACATCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTGCACGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAG]


>consensus_8013#1 CCGGACCAGCAAACCGATGACAACGACTTGGTATGCCGCGACCTGCACGCCGTACTGGGC CGTTTTCTTTTAGCCAGTTTTCTTGCAACCTACCTGCCGCGCGGTTCGCGTAACGGGTTA CCCGACCACATCTCTCTCGCTTTGTGGGAGCGATGAGACTAGTGTCCAACATCTACAATG AAAGCATTGAAACATCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGC GAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACC ACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCC AGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGA AACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGG AGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGA CGGAAAAGAATCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCG CGATCGTGCACGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCT TCTTACCGTCAAAGTACATTATTCACACCGTCGGTCCCATCTACAG



consensusID : consensus_8013#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 571
fasta sequence
                              [CCGGTCCGAAAAGGAAGTCAGTGCCAGTGTGTGTCAGTCCGACGTCTCGGCTAAAACGGCTTGAAAGAAAGCAGAAAAAATAGAAAACGAAACCGCGCCCTCCTTCTTCACCCATAAACGCAGCAGGACCGACCGTGTCTGTGTGTGTGTCTGTGTGTCTGTGTGCGCGCGCGTGTGGTTGTGCGTTCCGAGTAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACATCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCAC]

[+] EMBL BM596628             [CCGGTCCGAAAAGGAAGTCAGTGCCAGTGTGTGTCAGTCCGACGTCTCGGCTAAAACGGCTTGAAAGAAAGCAGAAAAAATAGAAAACGAAACCGCGCCCTCCTTCTTCACCCATAAACGCAGCAGGACCGACCGTGTCTGTGTGTGTGTCTGTGTGTCTGTGTGCGCGCGCGTGTGGTTGTGCGTTCCGAGTAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACATCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAACCATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAGGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGCAGCTCAAAGTCGATGCCATCACCAACAGCAC]


>consensus_8013#2 CCGGTCCGAAAAGGAAGTCAGTGCCAGTGTGTGTCAGTCCGACGTCTCGGCTAAAACGGC TTGAAAGAAAGCAGAAAAAATAGAAAACGAAACCGCGCCCTCCTTCTTCACCCATAAACG CAGCAGGACCGACCGTGTCTGTGTGTGTGTCTGTGTGTCTGTGTGCGCGCGCGTGTGGTT GTGCGTTCCGAGTAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACAT CACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAACC ATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCACTTTGTCACTCTAG GCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGTC CGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTTCTC CGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCGC AGCTCAAAGTCGATGCCATCACCAACAGCAC



consensusID : consensus_8013#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 358
fasta sequence
                              [CCGGGACCACCAAACCGATGACAACGACTTGGTATGCCGCGACCTGCACGCCGTACTGGGCCGTTTTCTTTTACCCAGTTTTCTTGCAACCTACCTGCCGCGCGGTTCGCGTAACGGGTTACCCGACCACATCTCTCTCGCTTTGTGGGGCGTGTTGCTTATTATTGCTAACAGCTGTGCGTGTCTCTATTTCGCGACTGAGGTATGATCTATTGTTTCAATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTGTGTGCTGAATAAGCCCTCGAATTGTGGAACGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATG]

[+] EMBL BM586195             [CCGGGACCACCAAACCGATGACAACGACTTGGTATGCCGCGACCTGCACGCCGTACTGGGCCGTTTTCTTTTACCCAGTTTTCTTGCAACCTACCTGCCGCGCGGTTCGCGTAACGGGTTACCCGACCACATCTCTCTCGCTTTGTGGGGCGTGTTGCTTATTATTGCTAACAGCTGTGCGTGTCTCTATTTCGCGACTGAGGTATGATCTATTGTTTCAATCGGTGCAAAGGATAAACGCGTGTGCTAAAAATTTGTGTGCTGAATAAGCCCTCGAATTGTGGAACGCGTGACACAAGGGCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATG]


>consensus_8013#3 CCGGGACCACCAAACCGATGACAACGACTTGGTATGCCGCGACCTGCACGCCGTACTGGG CCGTTTTCTTTTACCCAGTTTTCTTGCAACCTACCTGCCGCGCGGTTCGCGTAACGGGTT ACCCGACCACATCTCTCTCGCTTTGTGGGGCGTGTTGCTTATTATTGCTAACAGCTGTGC GTGTCTCTATTTCGCGACTGAGGTATGATCTATTGTTTCAATCGGTGCAAAGGATAAACG CGTGTGCTAAAAATTTGTGTGCTGAATAAGCCCTCGAATTGTGGAACGCGTGACACAAGG GCCAGTGACGTAGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAATCAATTAATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8013#0      ------------------------------------------------------------
consensus_8013#3      --------------------------------CCGGGACCACCAAACCGATGACAACGAC 28
consensus_8013#1      ---------------------------------CCGGACCAGCAAACCGATGACAACGAC 27
consensus_8013#2      CCGGTCCGAAAAGGAAGTCAGTGCCAGTGTGTGTCAGTCCGACGTCTCGGCTAAAACGGC 60
                                                                                  

consensus_8013#0      ------------------------------------------------------------
consensus_8013#3      TTGGTATGCCGCG-----ACCTGCACGCCGTACTGGGCCGTTTTCTTTTACCCAGTTTTC 83
consensus_8013#1      TTGGTATGCCGCG-----ACCTGCACGCCGTACTGGGCCGTTTTCTTTTAGCCAGTTTTC 82
consensus_8013#2      TTGAAAGAAAGCAGAAAAAATAGAAAACGAAACCGCGCCCTCCTTCTTCACCCATAAACG 120
                                                                                  

consensus_8013#0      CCGCG--GACGCGT-GGGC-GCGCG---GTTCGCGTAACGGGTTACC-GACCACATCTCT 52
consensus_8013#3      TTGCA--ACCTACC-TGCC-GCGCG---GTTCGCGTAACGGGTTACCCGACCACATCTCT 136
consensus_8013#1      TTGCA--ACCTACC-TGCC-GCGCG---GTTCGCGTAACGGGTTACCCGACCACATCTCT 135
consensus_8013#2      CAGCAGGACCGACCGTGTCTGTGTGTGTGTCTGTGTGTCTGTGTGCGCGCGCGTGTGGTT 180
                        **     *      * * * * *   **  * **  * *  * *  *  *   *   *

consensus_8013#0      CTCGCTTTGTGGGGTGTGTTGCTTATTATTGCTAACAGCTGTGC--GTGTCTCTATTTCG 110
consensus_8013#3      CTCGCTTTGTGGGGCGTGTTGCTTATTATTGCTAACAGCTGTGC--GTGTCTCTATTTCG 194
consensus_8013#1      CT-CGCTTTGTGGGAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACA 194
consensus_8013#2      GT-GCGTTCCGAGTAGCGATGAGACTAGTGTCCAACATCTACAATGAAAGCATTGAAACA 239
                       *    **    *  * * **    *  *  * **** **          *  *    * 

consensus_8013#0      CGACT--GTGGTATGATCGATTGTTTCGATCGGTGCAAAGGATAAACGCGTGTGCTAAAA 168
consensus_8013#3      CGACT--GAGGTATGATCTATTGTTTCAATCGGTGCAAAGGATAAACGCGTGTGCTAAAA 252
consensus_8013#1      TCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAAC 254
consensus_8013#2      TCACTAGGAGGAATCGCGAAACATCTAACGCAACCGCAAGAATCGCGAGGACTGCCGAAC 299
                        ***  * ** **     *   * *    *      *** **      *  ***  ** 

consensus_8013#0      -ATTTGTGTGCTGTAGAAGCCCTGGAATTGTGGAAGGCGTGACACAAGGGCCAGTGACGT 227
consensus_8013#3      -ATTTGTGTGCTGAATAAGCCCTCGAATTGTGGAACGCGTGACACAAGGGCCAGTGACGT 311
consensus_8013#1      CATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCAC--TTTGTCACTC 312
consensus_8013#2      CATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCACCACCAC--TTTGTCACTC 357
                       ***    *       *    *   **  *  * *   *   *** *      ** **  

consensus_8013#0      AGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAAT-CAATTAATGCGTTATCGGCAG 286
consensus_8013#3      AGTGCTGTTTGTAATATTGTTCCCCGAGCAAGGGGAAT-CAATTAATG------------ 358
consensus_8013#1      TAGGCAGTCTAAAGCGCTGGGG--CGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCC 370
consensus_8013#2      TAGGCAGTCTAAAGCGCTGGGG--CGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCC 415
                         ** ** *  *    **     *** **    ***  * **    *            

consensus_8013#0      TGAGACGAACATACCTGGCAGATGATAGCGGTTCCCTTTGCTGCTGTGTAACACCAGCCC 346
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      GCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGT 430
consensus_8013#2      GCGTCCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGT 475
                                                                                  

consensus_8013#0      CGCCGGAGTTCAACCCCTGGCGTTGTTAGCACGCCGCAAGAATCGCGAGGACTGCCGAAC 406
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      TTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACAT 490
consensus_8013#2      TTCTCCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACAT 535
                                                                                  

consensus_8013#0      CATTCAACTCGCCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCACCACTTTGTCACTCTA 466
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      CTCGCAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAA 550
consensus_8013#2      CTCGCAGCTCAAAGTCGATGCCATCACCAACAGCAC------------------------ 571
                                                                                  

consensus_8013#0      GGCAGTCTAAAGCGCTGGGGCGAACAGTCAGAAGACGATCGCGGCCAGCCCCGTCCGCGT 526
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      TCGTGTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTGCA 610
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CCGACCGATTATAGCCAATTTGCTCCAAACGTTGAAGCCGGCCCGAAACACCCAGTTACT 586
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      CGACGTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTC 670
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CCGTTTCCGTGCGATGCCCAGATCAACAATCGTTTCGTAATTTGGGAGGGAGACATCTCG 646
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      AAAGTACATTATTCACACCGTCGGTCCCATCTACAG------------------------ 706
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CAGCTCAAAGTCGATGCCATCACCAACAGCACCGACGAAACGTTGACGGAAAAGAATCGT 706
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      GTGTCGAAGAAAATCTTTGGCCGTGCCGGTGCAGCACTAACCTCCGCGATCGTTCACGAC 766
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      GTGAGAAGATGTAAGACTGGTGAAGTTCGTGTTACACCAGGATTCTTCTTACCGTCAAAG 826
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      TACATTATTCACACCGTCGGTCCCATCTACAGCGAGAAGTACAGGACTGCTTCGGAAGCA 886
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      ACGCTGCACGCTTGTTATCGCAACGTGTTGTACAAAGCAAGGGAACTAGGATTAAGAACC 946
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      GTAGCCCTATGTGATATTAGCTCGGTGCAGCGCAACTTCCCACCAGACACTGCTGCACAT 1006
consensus_8013#3      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
consensus_8013#2      ------------------------------------------------------------
                                                                                  

consensus_8013#0      ATAGCATTGAGGACTGTTCGTCGTTTTCTGGAGCAATACCTGTGCCGAGATT 1058
consensus_8013#3      ----------------------------------------------------
consensus_8013#1      ----------------------------------------------------
consensus_8013#2      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)