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Anopheles gambiae
cluster # 8016 cluster # 8016       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8016#0 length = 1914 sequences # 7  
consensus_8016#1 length = 841 sequences # 1  
consensus_8016#2 length = 534 sequences # 1  

consensusID : consensus_8016#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1914
fasta sequence
                              [GACAGCAACATCAAATGTTCAGAAACGTAAACAGAGGAGCACATATCTCGCGTATGCTCGGCAGGATACCTTAGCAGCTTAGGCACACTTTAACGCACAGTTTGTTGCCGATCTAACCACAGACAGTCGGTTAGGCATCATGCTCTTGCACTTGCAGTCAGCTAAGACGTAATCACTCTTTTGTATTATCACTCACAGGCACAACCACTCTTCTCGTCACTGCTGAGGTAGTGAGCGTTGTAGATCTAGCCGGATTTCGGACGACTCTACCTTCTTCTTCTTGGGTAGTATTAACCCAGGAGAATAATGTATGGTGACAGACCGATCGGTATATCTGACAGATGACAGCGCTTACACAACCCTTCAGAGAGCGAGATAGAGCTTACAAGCTTTAGGATAATATTCTTAAAAAATGATGTGATTACTTACCGTCCTTGATATTGGTCCTGGTGGAGCTCTTCTTGAATGTAGGAGATCCTTCTGGTACCAGGAAAAAATCTCCAACACATACACACCACTCACTTCTGTTCTCCTCCGTTCGGTGTTATCCTGATGCTGGATCCGATCTGTGGATGGAGAAATCAGAGAAAAGA---ACAGACACCCGCACGTCGGACATGGCGTCTCGCAGGTGGAGAAGCGTCCTTTATATCACTGCTTTCGAAAGCATGCGAGAGAGTAACTGCATTCTCCGGCTTCTCGAGTAGCAATCCCCATTTAGGACGCAGACGAGTCGTTATCTCGACTTTAATATTCGTCGTTTACTTTTTAACGTATTTGCTTACCGTTTCTGCTGTGTGCCTGGTTTCCGGGCGCACCGGGTATTACGGGCGCCTGGCCACAAAAGGCAGATTCGGTAATTTCGGTCCCATATATCTATGATATATTTTTACTGTAAGTTCTATGAACATTACAACGTTTTAAGGTTTAACGAAGAAGAAGAAGAAGAAGAAAAAACAAACGATCGTAACAAAATAAT---AAAAAAATAATTAGGTATGTAA-GAGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGCCACACAGCTCCGTTGTGCTGTTGTGTTTTTTTTT-AGAAATTAAATGTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTC-TTTTCATCGCTGTGCACAACACTTTCATACACTTTTATCTCA-CTTTTAACGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACC-GGAA-CCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGAGTGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAAGTAGAAGTAGAAGTAGAAGTTGGTAAAGTCAAT--AGGGAGAATGAATTGCG-AGGAAGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAAGGGAAGGGAGTGATTGAGAGAAAGGAAGAAGAGTTTAATGGCTTG--TTTTTTAAATTAAACTAAGAATACAACAAAAGAATCTTCACTCAAAAGTGTGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGATTTAGGAACTATCGTTAAGATCAATAGCCACAAGTCTCCCCTTTACATCACCGCAGTGTAATGGAAGGGCTATAAGCTTTCAATTGTAACAAGTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGTTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCATGGGTAGCTCCACGCGAGAGGAGCATAATTTGTTTGTAATAGCTTATAA]

[+] EMBL BX628466             [GACAGCAACATCAAATGTTCAGAAACGTAAACAGAGGAGCACATATCTCGCGTATGCTCGGCAGGATACCTTAGCAGCTTAGGCACACTTTAACGCACAGTTTGTTGCCGATCTAACCACAGACAGTCGGTTAGGCATCATGCTCTTGCACTTGCAGTCAGCTAAGACGTAATCACTCTTTTGTATTATCACTCACAGGCACAACCACTCTTCTCGTCACTGCTGAGGTAGTGAGCGTTGTAGATCTAGCCGGATTTCGGACGACTCTACCTTCTTCTTCTTGGGTAGTATTAACCCAGGAGAATAATGTATGGTGACAGACCGATCGGTATATCTGACAGATGACAGCGCTTACACAACCCTTCAGAGAGCGAGATAGAGCTTACAAGCTTTAGGATAATATTCTTAAAAAATGATGTGATTACTTACCGTCCTTGATATTGGTCCTGGTGGAGCTCTTCTTGAATGTAGGAGATCCTTCTGGTACCAGGAAAAAATCTCCAACACATACACACCACTCACTTCTGTTCTCCTCCGTTCGGTGTTATCCTGATGCTGGATCCGATCTGTGGATGGAGAAATCAGAGAAAAGA   ACAGACACCCGCACGTCGGACATGGCGTCTCGCAGGTGGAGAAGCGTCCTTTATATCACTGCTTTCGAAAGCATGCGAGAGAGTAACTGCATTCTCCGGCTTCTCGAGTAGCAATCCCCATTTAGGACGCAGACGAGTCGTTATCTCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM591766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccGGAGAAATTAGAAAAAAAACCCACACACACCCGCACGTCGGACATGGCGTCTCGCAGGTGGAGAAGCGTCCTTTATATCACCGCTTTCGAAAGCATGCGAGAGAGTAACTGCATTCTCCGGCTTCTCGAATAGCAATCCCCATTTAGGACGCA ACGAGTCGTTGTCTCGACTTTAATATTCGTCGTTTACTTTTTAACGTATTTGCTTACCGTTTCTGCTGTGTGCCTGGTTTCCGGGCGCACCGGGTATTACGGGCGCCTGGCCACAAAAGGCAGATTCGGTAATTTCGGTCCCATATATCTATGATATATTTTTACTGTAAGTTCTATGAACATTACAACGTTTTAAGGTTTAACGAAGAAGAAGAAGAAGAAGAAAAAACAAACGATCGTAACAAAATAAT   AAAAAAATAATTAGGTATGTAA GAGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGCCACACAGCTCCGTTGTGCTGTTGTGTTTTTTTTT AGAAATTAAATGTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTCTTTTTCATCGCTGTGCACAACACTTTCATACACTTTTATCTCACCTTTTAACGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAAC ATTACCGGGAACCCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM641620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgATTTTTACTGTAAGTTCTATGAACATTACAACGTTTTAAGGTTTAACGAAGAAGAGGAAGAAGAAGAAAAAACAAACGATCGTAACAAAATAATTAAAAAAAAACAACTAGGTATGTAA GTGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGACACACAGCTCTGTTGTGCTGTTGTGTTTTTTTTTGTTAAATTAAATGTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTC TTTTCTTTGCTGTGCACAACACTTTCATACACTTTTATCTCA CTTTTAACGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCCACGTAAGCAAACAATTACC GGAA CCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGAGTGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAAGTAGAAATAGAAGTAGAAGTTGGCAAAATCAAT  AGGGAGAATGAATTGTG AGGAAGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGG                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM587806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgTGTAAGTTCTATGAACATTACAACGTTTTAAGGTTTAACGAAGAAGAAGAAGAAGAAGAAAAAACAAACGATCGTAACAAAATAAT   AAAAAAATAATTAGGTATGTAA GAGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGCCACACAGCTCCGTTGTGCTGTTGTGTTTTTTTTT AGAAATTAAATGTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTC TTTTCATCGCTGTGCACAACACTTTCATACACTTTTATCTCA CTTTTAACGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACC GGAA CCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGAGTGTTAGTGTGTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAAGTAGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAAAGGGAGAATGAAATGCGCGGGAAGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGAGAGACATTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM652754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccacgcgtcCGATCGTAACAAAATAAT   AAAAAAATAATTAGGTATGTAAGGAGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGCCACACAGCTCCGGTGTGCTGTTGTGTTTTTTTTT AGAAATTAAATGTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTC TTTTCATCGCTGTGCACAACACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX621659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGCGTGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGTAGTAGTAGTAGAAGTAGAAGTAGAAGTAGAAGTTGGTAAAGTCAAT  AGGGAGAATGAATTGCG AGGAAGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAAGGGAAGGGAGTGATTGAGAGAAAGGAAGAAGAGTTTAATGGCTTG  TTTTTTAAATTAAACTAAGAATACAACAAAAGAATCTTCACTCAAAAGTGTGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGATTTAGGAACTATCGTTAAGATCAATAGCCACAAGTCTCCCCTTTACATCACCGCAGTGTAATGGAAGGGCTATAAGCTTTCAATTGTAACAAGTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGTTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCATGGGTAGCTCCACGCGAGAGGAGCATAATTTGTTTGTAATAGCTTATAA]
[+] EMBL BX609648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGAGTGTTAGTGTGTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAAGTAGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAAAGGGAGAATGAAATGCG CGGAAGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTGCATGTGATGTGTCAGAAAGGGAAGGGAGTGATCGAGAGAAAGGAAGAAGAGTTTAATGGCTTGTTTTTTTTTAATTAAACTAAGAATAATACAACAGAATCTTCACTCAAAAGTGTGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGATTTAGGAGCTATCGTTAAGATCAATAGCCACAAGTCTCCCCTTTACACCACCGCAGTGTAATGGAAGGGCTATAAGCTTTCAATTGTAACAAGTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGTTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCA                                                 ]


>consensus_8016#0 GACAGCAACATCAAATGTTCAGAAACGTAAACAGAGGAGCACATATCTCGCGTATGCTCG GCAGGATACCTTAGCAGCTTAGGCACACTTTAACGCACAGTTTGTTGCCGATCTAACCAC AGACAGTCGGTTAGGCATCATGCTCTTGCACTTGCAGTCAGCTAAGACGTAATCACTCTT TTGTATTATCACTCACAGGCACAACCACTCTTCTCGTCACTGCTGAGGTAGTGAGCGTTG TAGATCTAGCCGGATTTCGGACGACTCTACCTTCTTCTTCTTGGGTAGTATTAACCCAGG AGAATAATGTATGGTGACAGACCGATCGGTATATCTGACAGATGACAGCGCTTACACAAC CCTTCAGAGAGCGAGATAGAGCTTACAAGCTTTAGGATAATATTCTTAAAAAATGATGTG ATTACTTACCGTCCTTGATATTGGTCCTGGTGGAGCTCTTCTTGAATGTAGGAGATCCTT CTGGTACCAGGAAAAAATCTCCAACACATACACACCACTCACTTCTGTTCTCCTCCGTTC GGTGTTATCCTGATGCTGGATCCGATCTGTGGATGGAGAAATCAGAGAAAAGAACAGACA CCCGCACGTCGGACATGGCGTCTCGCAGGTGGAGAAGCGTCCTTTATATCACTGCTTTCG AAAGCATGCGAGAGAGTAACTGCATTCTCCGGCTTCTCGAGTAGCAATCCCCATTTAGGA CGCAGACGAGTCGTTATCTCGACTTTAATATTCGTCGTTTACTTTTTAACGTATTTGCTT ACCGTTTCTGCTGTGTGCCTGGTTTCCGGGCGCACCGGGTATTACGGGCGCCTGGCCACA AAAGGCAGATTCGGTAATTTCGGTCCCATATATCTATGATATATTTTTACTGTAAGTTCT ATGAACATTACAACGTTTTAAGGTTTAACGAAGAAGAAGAAGAAGAAGAAAAAACAAACG ATCGTAACAAAATAATAAAAAAATAATTAGGTATGTAAGAGAATCCGTACGGTTAGGTTA AGGAACTCTCTCCGCCACACAGCTCCGTTGTGCTGTTGTGTTTTTTTTTAGAAATTAAAT GTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTCTTTTCATCGC TGTGCACAACACTTTCATACACTTTTATCTCACTTTTAACGAGTTGAAATCCTTCATCTC TTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACCGGAACCGGTTTCG TAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGAGTGTTA GTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAA GTAGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAGGGAGAATGAATTGCGAGGAAGGTTT CGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGAGAGACATTTGAGCTCAC TTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAAGGGAAGGGAGTGAT TGAGAGAAAGGAAGAAGAGTTTAATGGCTTGTTTTTTAAATTAAACTAAGAATACAACAA AAGAATCTTCACTCAAAAGTGTGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGAT TTAGGAACTATCGTTAAGATCAATAGCCACAAGTCTCCCCTTTACATCACCGCAGTGTAA TGGAAGGGCTATAAGCTTTCAATTGTAACAAGTTGTCCAATATTCGTCTATTGTTAAGCA GATTATTCATTAAAGCGTTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTG GTGCATGGGTAGCTCCACGCGAGAGGAGCATAATTTGTTTGTAATAGCTTATAA



consensusID : consensus_8016#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 841
fasta sequence
                              [CAAGAATCNCCACGAGNGATCGTAACAAAATAATTGAAAACANAAACAACTAGGTATGTAAGTGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGACACACAGCTCCGTTGTGCTGTTGTGTTTTTTGTTAAATTAAATGTATCTGTTCTGGTTTCACTTTCACACTCTACAAACACCAACTTTTTCTCTTTTCTCTGCTGTGCACAACACTTTCATACACTTTTATCTCACTTTTAACGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACCGGAACCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGCGTGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAAGTACGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAGGGAGCAATGAACTTGCGAGGAACGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGCAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAACGGGAAGGGACGTGATTGAGAGAAACGGACACGNAAGACGCTCTTACATGGCTTGTNTCTTAANATTAAAACTAGGAATACAACAAAAACGAATCTTTCACTCCAAGNANGTGTTGGGTCATTCATACATTCAAGGTCCAACAAGAGGTTGTCACGTCTAGAGGATTCTAGGGAACCTAATCGGTTAACGACTTCNACTTAGCCAACAAAGTTCTTCCCCTTTAACATT]

[+] EMBL BX467306             [CAAGAATCNCCACGAGNGATCGTAACAAAATAATTGAAAACANAAACAACTAGGTATGTAAGTGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGACACACAGCTCCGTTGTGCTGTTGTGTTTTTTGTTAAATTAAATGTATCTGTTCTGGTTTCACTTTCACACTCTACAAACACCAACTTTTTCTCTTTTCTCTGCTGTGCACAACACTTTCATACACTTTTATCTCACTTTTAACGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACCGGAACCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGCGTGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAGTAGAAGTACGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAGGGAGCAATGAACTTGCGAGGAACGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGCAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAACGGGAAGGGACGTGATTGAGAGAAACGGACACGNAAGACGCTCTTACATGGCTTGTNTCTTAANATTAAAACTAGGAATACAACAAAAACGAATCTTTCACTCCAAGNANGTGTTGGGTCATTCATACATTCAAGGTCCAACAAGAGGTTGTCACGTCTAGAGGATTCTAGGGAACCTAATCGGTTAACGACTTCNACTTAGCCAACAAAGTTCTTCCCCTTTAACATT]


>consensus_8016#1 CAAGAATCNCCACGAGNGATCGTAACAAAATAATTGAAAACANAAACAACTAGGTATGTA AGTGAATCCGTACGGTTAGGTTAAGGAACTCTCTCCGACACACAGCTCCGTTGTGCTGTT GTGTTTTTTGTTAAATTAAATGTATCTGTTCTGGTTTCACTTTCACACTCTACAAACACC AACTTTTTCTCTTTTCTCTGCTGTGCACAACACTTTCATACACTTTTATCTCACTTTTAA CGAGTTGAAATCCTTCATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAA CAATTACCGGAACCGGTTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGC AATATTTGAAGTAGCGTGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGAT ATTATAGAAGTAGTAGTAGAAGTACGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAGGGA GCAATGAACTTGCGAGGAACGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTC GTCGATGCAGAGACATTTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTG ATGTGTCAGAAACGGGAAGGGACGTGATTGAGAGAAACGGACACGNAAGACGCTCTTACA TGGCTTGTNTCTTAANATTAAAACTAGGAATACAACAAAAACGAATCTTTCACTCCAAGN ANGTGTTGGGTCATTCATACATTCAAGGTCCAACAAGAGGTTGTCACGTCTAGAGGATTC TAGGGAACCTAATCGGTTAACGACTTCNACTTAGCCAACAAAGTTCTTCCCCTTTAACAT T



consensusID : consensus_8016#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 534
fasta sequence
                              [CCGGATTAGCAAGCACCTAGCGATCTATCTTAAATTCTAATCGATCGATCGATTACATCAATGGCTTGTTTTTTTTAAATTAAACTAAGAATAATACAACAGAATCTTCACTCAAAAGTGTGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGATTTAGGAACTATCGTTAAGGCTAATAGCCACAAGTCTCCCCTTTACACCAGCGCAGTGTAATGGAAGGGCTATAAGCTTTTCATTGAAACAATTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGCTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCATGGGTAGCTCCACGCGAGAGGAGCATAATTTGTTTGTAGTAGCTTATAACAAAACAACAAAACAAAAAAAGATATTTAGCCGTAAGCCACAACTTCTAAGAAAATAACTTCATGTGATTTAAGTGCCTTTCCCAGTTTAATATATGTAACAGAAAACATAACCACAACCAAGCTATTGATGTAATCGATC]

[+] EMBL BM654635             [CCGGATTAGCAAGCACCTAGCGATCTATCTTAAATTCTAATCGATCGATCGATTACATCAATGGCTTGTTTTTTTTAAATTAAACTAAGAATAATACAACAGAATCTTCACTCAAAAGTGTGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGATTTAGGAACTATCGTTAAGGCTAATAGCCACAAGTCTCCCCTTTACACCAGCGCAGTGTAATGGAAGGGCTATAAGCTTTTCATTGAAACAATTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGCTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCATGGGTAGCTCCACGCGAGAGGAGCATAATTTGTTTGTAGTAGCTTATAACAAAACAACAAAACAAAAAAAGATATTTAGCCGTAAGCCACAACTTCTAAGAAAATAACTTCATGTGATTTAAGTGCCTTTCCCAGTTTAATATATGTAACAGAAAACATAACCACAACCAAGCTATTGATGTAATCGATC]


>consensus_8016#2 CCGGATTAGCAAGCACCTAGCGATCTATCTTAAATTCTAATCGATCGATCGATTACATCA ATGGCTTGTTTTTTTTAAATTAAACTAAGAATAATACAACAGAATCTTCACTCAAAAGTG TGGTCATTCATAATAAGTCAACAGAGTTGTTGTTAAGATTTAGGAACTATCGTTAAGGCT AATAGCCACAAGTCTCCCCTTTACACCAGCGCAGTGTAATGGAAGGGCTATAAGCTTTTC ATTGAAACAATTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGCTAG TTAGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCATGGGTAGCTCCACGCG AGAGGAGCATAATTTGTTTGTAGTAGCTTATAACAAAACAACAAAACAAAAAAAGATATT TAGCCGTAAGCCACAACTTCTAAGAAAATAACTTCATGTGATTTAAGTGCCTTTCCCAGT TTAATATATGTAACAGAAAACATAACCACAACCAAGCTATTGATGTAATCGATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8016#0      GACAGCAACATCAAATGTTCAGAAACGTAAACAGAGGAGCACATATCTCGCGTATGCTCG 60
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      GCAGGATACCTTAGCAGCTTAGGCACACTTTAACGCACAGTTTGTTGCCGATCTAACCAC 120
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      AGACAGTCGGTTAGGCATCATGCTCTTGCACTTGCAGTCAGCTAAGACGTAATCACTCTT 180
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      TTGTATTATCACTCACAGGCACAACCACTCTTCTCGTCACTGCTGAGGTAGTGAGCGTTG 240
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      TAGATCTAGCCGGATTTCGGACGACTCTACCTTCTTCTTCTTGGGTAGTATTAACCCAGG 300
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      AGAATAATGTATGGTGACAGACCGATCGGTATATCTGACAGATGACAGCGCTTACACAAC 360
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      CCTTCAGAGAGCGAGATAGAGCTTACAAGCTTTAGGATAATATTCTTAAAAAATGATGTG 420
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      ATTACTTACCGTCCTTGATATTGGTCCTGGTGGAGCTCTTCTTGAATGTAGGAGATCCTT 480
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      CTGGTACCAGGAAAAAATCTCCAACACATACACACCACTCACTTCTGTTCTCCTCCGTTC 540
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      GGTGTTATCCTGATGCTGGATCCGATCTGTGGATGGAGAAATCAGAGAAAAGAACAGACA 600
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      CCCGCACGTCGGACATGGCGTCTCGCAGGTGGAGAAGCGTCCTTTATATCACTGCTTTCG 660
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      AAAGCATGCGAGAGAGTAACTGCATTCTCCGGCTTCTCGAGTAGCAATCCCCATTTAGGA 720
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      CGCAGACGAGTCGTTATCTCGACTTTAATATTCGTCGTTTACTTTTTAACGTATTTGCTT 780
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      ACCGTTTCTGCTGTGTGCCTGGTTTCCGGGCGCACCGGGTATTACGGGCGCCTGGCCACA 840
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      AAAGGCAGATTCGGTAATTTCGGTCCCATATATCTATGATATATTTTTACTGTAAGTTCT 900
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      ATGAACATTACAACGTTTTAAGGTTTAACGAAGAAGAAGAAGAAGAAGAAAAAACAAACG 960
consensus_8016#1      ------------------------------------------CAAGAATCNCCACGAGNG 18
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      ATCGTAACAAAATAAT-----AAAAAAATAATTAGGTATGTAAGAGAATCCGTACGGTTA 1015
consensus_8016#1      ATCGTAACAAAATAATTGAAAACANAAACAACTAGGTATGTAAGTGAATCCGTACGGTTA 78
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      GGTTAAGGAACTCTCTCCGCCACACAGCTCCGTTGTGCTGTTGTGTTTTTTTTTAGAAAT 1075
consensus_8016#1      GGTTAAGGAACTCTCTCCGACACACAGCTCCGTTGTGCTGTTGTGTTTTTTGTTA--AAT 136
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      TAAATGTATCTGTTCTGTTTTCACTTTCACACTCTACAAACACTTACTTTTTCTCTTTTC 1135
consensus_8016#1      TAAATGTATCTGTTCTGGTTTCACTTTCACACTCTACAAACACCAACTTTTTCTCTTTTC 196
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      ATCGCTGTGCACAACACTTTCATACACTTTTATCTCACTTTTAACGAGTTGAAATCCTTC 1195
consensus_8016#1      TCTGCTGTGCACAACACTTTCATACACTTTTATCTCACTTTTAACGAGTTGAAATCCTTC 256
consensus_8016#2      -------------------------------------------------CCGGATTAGCA 11
                                                                           **     

consensus_8016#0      ATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACCGGAACCGG 1255
consensus_8016#1      ATCTCTTCTCAATAAGTATAAAAACAATTAGCTACGTAAGCAAACAATTACCGGAACCGG 316
consensus_8016#2      AGCACCTAGCGATCTATCTTAAATT------CTAATCGATCGATCGATTACATCAAT-GG 64
                      * * * *  * **   * * ***        ***    * * * * *****   **  **

consensus_8016#0      TTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGAG 1315
consensus_8016#1      TTTCGTAAGTCGAAACCTCACCGGTAGTACTAGGCTATCGTTGCAATATTTGAAGTAGCG 376
consensus_8016#2      CTTGTTTTTTTTAAATTAAACTAAGAATAATA------CAACAGAATCTTCACTCAAAAG 118
                       **  *   *  ***    **    * ** **      *     *** **      *  *

consensus_8016#0      TGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAG 1375
consensus_8016#1      TGTTAGTGTTTTGAAGCAAAAGTGGGAAATGTTTCCCCATTGATATTATAGAAGTAGTAG 436
consensus_8016#2      TGTGGTCATTCATAATAAGTCAACAGAGTTGTT-----GTTAAGATTTAGGAACTATCGT 173
                      ***     **   **  *       **  ****      ** * ***   *** **    

consensus_8016#0      TAGAAGTA-GAAGTAGAAGTAGAAGTTGGTAAAGTCAATAGGGAG-AATGAA-TTGCGAG 1432
consensus_8016#1      TAGAAGTACGAAGTAGAAGTAGAAGTTGGTAAAGTCAATAGGGAGCAATGAACTTGCGAG 496
consensus_8016#2      TAAGGCTAATAGCCACAAGTCTCCCCT--TTACACCAGCGCAGTGTAATGGAAGGGCTAT 231
                      **    **  *   * ****      *  * *   **     * * **** *   ** * 

consensus_8016#0      GAA-GGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATG-AGAGACAT 1490
consensus_8016#1      GAACGGTTTCGTGGCGGCTCTGGACACACAACCGATCAACAGTCGTCGATGCAGAGACAT 556
consensus_8016#2      AAG-CTTTTCATTGAAACAATTTGTCCAATATTCGTCTATTGTTAAGCAGA-TTATTCAT 289
                       *    **** * *   *  *     **  *    ** *  **     *     *  ***

consensus_8016#0      TTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAA-GGG 1549
consensus_8016#1      TTGAGCTCACTTTCTCATCGTAGACTTTTCGCCGGTTACATGTGATGTGTCAGAAACGGG 616
consensus_8016#2      TAAAGCGCTAGTTAGCGCTTTTGTCTCACACATATTTCTCTACCACCT-TGGTGCATGGG 348
                      *  *** *   **  *    * * **         **   *   *  * *     * ***

consensus_8016#0      AAGGGA-GTGATTGAGAGAAA-------GGAAGAAGAGTTTA-ATGGCTTGTTTTTTAAA 1600
consensus_8016#1      AAGGGACGTGATTGAGAGAAACGGACACGNAAGACGCTCTTACATGGCTTGTNTCTTAAN 676
consensus_8016#2      TAGCTCCACG--CGAGAGGAGC------ATAATTTGTTTGTA-GTAGCTTATAACAAAAC 399
                       **      *   ***** *          **   *    **  * **** *     ** 

consensus_8016#0      TT--AAACTAAGAATACAACAAAA--GAATCTT-CACTC---AAAAGTGT--GGTCATTC 1650
consensus_8016#1      ATTAAAACTAGGAATACAACAAAAACGAATCTTTCACTCCAAGNANGTGTTGGGTCATTC 736
consensus_8016#2      AACAAAACAAAAAAAGATATTTAGCCGTAAGCCACAACTTCTAAGAAAATAACTTCATGT 459
                          **** *  **    *   *   * *     **             *    ****  

consensus_8016#0      ATA-AT---AAGTCAACAGAGTTGTTGTTAAGATTT---AGGAACTATCGTTAAGATCAA 1703
consensus_8016#1      ATACATTCAAGGTCCAACAAGAGGTTGTCACGTCTA---GAGGATTCTAGGGAACCTAAT 793
consensus_8016#2      G---ATTTAAGTGCCTTTCCCAGTTTAATATATGTAACAGAAAACATAACCACAACCAAG 516
                          **   *   *          **   *    *        *         *    * 

consensus_8016#0      TAGCCACAAGTCTCCCCTTTACATCACCGCAGTGTAATGGAAGGGCTATAAGCTTTCAAT 1763
consensus_8016#1      CGGTTAACGACTTCNACTTAGC-------CAACAAAGTTCTTCCCCTTTAACATT----- 841
consensus_8016#2      CTATTGATGTAATCGATC------------------------------------------ 534
                                  **                                              

consensus_8016#0      TGTAACAAGTTGTCCAATATTCGTCTATTGTTAAGCAGATTATTCATTAAAGCGTTAGTT 1823
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      AGCGCTTTTGTCTCACACATATTTCTCTACCACCTTGGTGCATGGGTAGCTCCACGCGAG 1883
consensus_8016#1      ------------------------------------------------------------
consensus_8016#2      ------------------------------------------------------------
                                                                                  

consensus_8016#0      AGGAGCATAATTTGTTTGTAATAGCTTATAA 1914
consensus_8016#1      -------------------------------
consensus_8016#2      -------------------------------
                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)