These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 550 fasta sequence [CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACACGATGAAATAATAGAAAGTGGCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGATGAACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGTGTTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAACTATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTTGTCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACTAGTTTATTACT] [+] EMBL BM575304 [CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACACGATGAAATAATAGAAAGTGGCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGATGAACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGTGTTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAACTATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTTGTCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACTAGTTTATTACT] consensusID : consensus_803#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 210 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACA] [+] EMBL BM614579 [CCGCGGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_803#0 CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACAC 60 consensus_803#1 --------------------------------------------------------CCGC 4 * * consensus_803#0 GATGAAATAATAGAAAGTG-GCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTA 119 consensus_803#1 GGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTATTTA 64 * * * * * * * ************************************* consensus_803#0 TTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTT 179 consensus_803#1 TTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTT 124 ************************************************************ consensus_803#0 GAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTT 239 consensus_803#1 GAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTT 184 ************************************************************ consensus_803#0 AAAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGAT 299 consensus_803#1 AAAGTTATTATGATGAAAATGAAACA---------------------------------- 210 ************************** consensus_803#0 GAACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGT 359 consensus_803#1 ------------------------------------------------------------ consensus_803#0 GTTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAAC 419 consensus_803#1 ------------------------------------------------------------ consensus_803#0 TATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTT 479 consensus_803#1 ------------------------------------------------------------ consensus_803#0 GTCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACT 539 consensus_803#1 ------------------------------------------------------------ consensus_803#0 AGTTTATTACT 550 consensus_803#1 ----------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||