cluster # 8044

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Anopheles gambiae
cluster # 8044 cluster # 8044 Sequences # 9 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8044#0 length = 963 sequences # 4
consensus_8044#1 length = 687 sequences # 1
consensus_8044#2 length = 587 sequences # 1

consensus_8044#3 length = 575 sequences # 1
consensus_8044#4 length = 541 sequences # 1
consensus_8044#5 length = 264 sequences # 1

consensusID : consensus_8044#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 963
fasta sequence

                              [CCCCGGAACGTGTTCGCAGCACAACTCGCAACTGTAGTACAGTACCAAATAAACGGTGGCCCATTCGTTCGCAGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGAGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAACCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTACCTGGGTTCGCAGGACTGCGTGCGACCGGAGGTGCTCGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAACAGTCCCGGATAGAAAGCCGGTTTGTCGAGTGCTTGGATCTTCCGGAAACGAATCTGGCCGAGGTGCTGGTCAAAACGAACGCCTTCATAGACGGCTGCAGGGCGTGCGGGGGGCGCGTACTGGTGCACTGCAATGCCGGCGTGTCTAGGTCGACGTCGGTGGTTGTGGGCTACCTGATGGAGCGGTGTGATCAATCGTTCATGCAGGCATTCGGAACGGTCAAGAGCAAGAGAACCATGCGT]

[+] EMBL BM633847             [  CCGGAACGTGTTCGCAGCACAACTCGCAACTGTAGTACAGTACCAAATAAACGGTGGCCCATTCGTTCGCAGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGAGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAACCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTACCTGGGTTCGCAGGACTGCGTGCGACCGGAGGTGCTCGAGAAGTACGGCATCACACACGTGCTCAGC                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM655130             [ccggtGAACGTGTTCGCAGCACAACTCGCAACTGTAGTACAGTACCAAATAAACGGTGGCCCATTCGTTCGCAGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGAGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAACCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTACCTGGGTTCGCAGGACTGCGTGCGACCGGAGGTGCTCGAGAAGTACG                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM640981             [                                                                                    ccgAAAATCGACAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGAGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAACCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTACCTGGGTTCGCAGGACTGCGTGCGACCGGAGGTGCTCGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAACAGTCCCGGATAGAAAGCCGGTTTGTCGAGTGCTTGGATCTTCCGGA                                                                                                                                                                                                    ]
[+] EMBL BX621902             [                                                                                                                                                                                                                                                   GGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAACCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTACCTGGGTTCGCAGGACTGCGTGCGACCGGAGGTGCTCGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAACAGTCCCGGATAGAAAGCCGGTTTGTCGAGTGCTTGGATCTTCCGGAAACGAATCTGGCCGAGGTGCTGGTCAAAACGAACGCCTTCATAGACGGCTGCAGGGCGTGCGGGGGGCGCGTACTGGTGCACTGCAATGCCGGCGTGTCTAGGTCGACGTCGGTGGTTGTGGGCTACCTGATGGAGCGGTGTGATCAATCGTTCATGCAGGCATTCGGAACGGTCAAGAGCAAGAGAACCATGCGT]




>consensus_8044#0
CCCCGGAACGTGTTCGCAGCACAACTCGCAACTGTAGTACAGTACCAAATAAACGGTGGC
CCATTCGTTCGCAGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGTCAGTTTAAGGAT
CCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAA
CCATTGCTGAAGCTGTCGAGTCGGTGAGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGG
AAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCT
GGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACG
ACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTC
GAGCAATTGCGCAACCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATG
GATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGC
TTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTAC
CTGGGTTCGCAGGACTGCGTGCGACCGGAGGTGCTCGAGAAGTACGGCATCACACACGTG
CTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAA
CAGTCCCGGATAGAAAGCCGGTTTGTCGAGTGCTTGGATCTTCCGGAAACGAATCTGGCC
GAGGTGCTGGTCAAAACGAACGCCTTCATAGACGGCTGCAGGGCGTGCGGGGGGCGCGTA
CTGGTGCACTGCAATGCCGGCGTGTCTAGGTCGACGTCGGTGGTTGTGGGCTACCTGATG
GAGCGGTGTGATCAATCGTTCATGCAGGCATTCGGAACGGTCAAGAGCAAGAGAACCATG
CGT

consensusID : consensus_8044#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 687
fasta sequence

                              [CGCTTCCGCTATCGTAATCCATTCCTTGGCAAAGCGCTCTATCTGACCATCGATGAATCGTTACTTAATCAACTTATCCTACATCGGCACTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCATCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGCGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGACCGGAGGTACTGGAGAAGTACGGCATCACACACGTGCT]

[+] EMBL BX625220             [CGCTTCCGCTATCGTAATCCATTCCTTGGCAAAGCGCTCTATCTGACCATCGATGAATCGTTACTTAATCAACTTATCCTACATCGGCACTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTTGCTAAAGTTACGGCCCATCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGCGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGACCGGAGGTACTGGAGAAGTACGGCATCACACACGTGCT]




>consensus_8044#1
CGCTTCCGCTATCGTAATCCATTCCTTGGCAAAGCGCTCTATCTGACCATCGATGAATCG
TTACTTAATCAACTTATCCTACATCGGCACTCGGTTTCGTGGCATTCAGCGCAAAATCGA
CAAATCTGCCGGTCAGTTTAAGGATCCACATACAGTGCAAGGAGTGATCGAGGAGGCTTT
GCTAAAGTTACGGCCCATCAATGAACCATTGCTGAAGCTGTCGAGTCGGTGCGGCGCATG
GTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATG
CTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCA
CTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGAC
GAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCG
CACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGA
AATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGC
CTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGACCGGAGGTACT
GGAGAAGTACGGCATCACACACGTGCT

consensusID : consensus_8044#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence

                              [CCGGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGAACGGACACGGGCGTGCATGCGCTGCACAATACCGTCCACGTAGATTTGCAGCGCCCGAATGGAAAACCGTACGATAGCGATCGTATAACCAAAACGCTGAATCGTGCGTTCGAAAAAGATGGGCAATCTTTACGCATCCTCAGTACGGTGCGTGTTCCGGCTTCTTTTCACGCACGCCTGTGCGCCAAATCGCGTACGTACCTTTACCGGTTGGCGGTGCTGAAGAGGGAGTATGCCCGTGAGTCCGGCCGGCAGCAGCATCCGCACGCACGCTTCATTCCGATCGAGGAGCACGATCGCTGCTACTTTTTAGGACACTCGGAGTTTGATATAAACGCGTTTGCTAGCGTTGCTCGGATGTTTGAAGGGATGCATGACTTTCGCACGTTCATGGCCGTTGCTAAGGGCAACCCAAGACAGCAGGAAGCGATGCATTCACTGAGACGCATCGACCAGATCACGGTTGAAAGGGGACACACGATGACGGCGGCTTTTAATAGGGAACGGACTGAGCACTACTATGACT]

[+] EMBL BM601741             [CCGGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGAACGGACACGGGCGTGCATGCGCTGCACAATACCGTCCACGTAGATTTGCAGCGCCCGAATGGAAAACCGTACGATAGCGATCGTATAACCAAAACGCTGAATCGTGCGTTCGAAAAAGATGGGCAATCTTTACGCATCCTCAGTACGGTGCGTGTTCCGGCTTCTTTTCACGCACGCCTGTGCGCCAAATCGCGTACGTACCTTTACCGGTTGGCGGTGCTGAAGAGGGAGTATGCCCGTGAGTCCGGCCGGCAGCAGCATCCGCACGCACGCTTCATTCCGATCGAGGAGCACGATCGCTGCTACTTTTTAGGACACTCGGAGTTTGATATAAACGCGTTTGCTAGCGTTGCTCGGATGTTTGAAGGGATGCATGACTTTCGCACGTTCATGGCCGTTGCTAAGGGCAACCCAAGACAGCAGGAAGCGATGCATTCACTGAGACGCATCGACCAGATCACGGTTGAAAGGGGACACACGATGACGGCGGCTTTTAATAGGGAACGGACTGAGCACTACTATGACT]




>consensus_8044#2
CCGGGAGGCTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCG
AACGGACACGGGCGTGCATGCGCTGCACAATACCGTCCACGTAGATTTGCAGCGCCCGAA
TGGAAAACCGTACGATAGCGATCGTATAACCAAAACGCTGAATCGTGCGTTCGAAAAAGA
TGGGCAATCTTTACGCATCCTCAGTACGGTGCGTGTTCCGGCTTCTTTTCACGCACGCCT
GTGCGCCAAATCGCGTACGTACCTTTACCGGTTGGCGGTGCTGAAGAGGGAGTATGCCCG
TGAGTCCGGCCGGCAGCAGCATCCGCACGCACGCTTCATTCCGATCGAGGAGCACGATCG
CTGCTACTTTTTAGGACACTCGGAGTTTGATATAAACGCGTTTGCTAGCGTTGCTCGGAT
GTTTGAAGGGATGCATGACTTTCGCACGTTCATGGCCGTTGCTAAGGGCAACCCAAGACA
GCAGGAAGCGATGCATTCACTGAGACGCATCGACCAGATCACGGTTGAAAGGGGACACAC
GATGACGGCGGCTTTTAATAGGGAACGGACTGAGCACTACTATGACT

consensusID : consensus_8044#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence

                              [GCAGATCGCCCGAGGTTTAAATCCACACTTCGCTATCAACGAATCGGCTTCTATGCCGGTAATTATACGCGCCCGATGCGTGTACTTAACGCTTCCGCTATCGTAATCCATTCCTTGTGGCAAAGCGCTCTATCTGACCATCGATGAATCGTTACTTAATCAANCTATCCTACATCGGCACTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGNNCGGTACAGTTTAAGGATCCACATACAGTGCAATGGAGTGATCGAGGAGTGCTTATTGCTAAATGTTACGGCCCGTCAATGAACCATATGCTGAAGCTGTACGAGTACGGTGAGTGCGCATGGTTTGGTCTGCTATGGGCTGGCTGCAGCGCGAAGGGCGAATTACCGAGACGGGACATTTATCGCATGGCTAACCGTGCCTGTACGCAGAACTACCTGGTGCAGCGAACGTATTCTGTAGCTGCCCGCGTACGCACTCTACCTTNTGCCACGTCGAGTACGACCCGANTTGCATCTTGCGTTCTTCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTCTCGAGCANATTGC]

[+] EMBL AL930089             [GCAGATCGCCCGAGGTTTAAATCCACACTTCGCTATCAACGAATCGGCTTCTATGCCGGTAATTATACGCGCCCGATGCGTGTACTTAACGCTTCCGCTATCGTAATCCATTCCTTGTGGCAAAGCGCTCTATCTGACCATCGATGAATCGTTACTTAATCAANCTATCCTACATCGGCACTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGNNCGGTACAGTTTAAGGATCCACATACAGTGCAATGGAGTGATCGAGGAGTGCTTATTGCTAAATGTTACGGCCCGTCAATGAACCATATGCTGAAGCTGTACGAGTACGGTGAGTGCGCATGGTTTGGTCTGCTATGGGCTGGCTGCAGCGCGAAGGGCGAATTACCGAGACGGGACATTTATCGCATGGCTAACCGTGCCTGTACGCAGAACTACCTGGTGCAGCGAACGTATTCTGTAGCTGCCCGCGTACGCACTCTACCTTNTGCCACGTCGAGTACGACCCGANTTGCATCTTGCGTTCTTCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTCTCGAGCANATTGC]




>consensus_8044#3
GCAGATCGCCCGAGGTTTAAATCCACACTTCGCTATCAACGAATCGGCTTCTATGCCGGT
AATTATACGCGCCCGATGCGTGTACTTAACGCTTCCGCTATCGTAATCCATTCCTTGTGG
CAAAGCGCTCTATCTGACCATCGATGAATCGTTACTTAATCAANCTATCCTACATCGGCA
CTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGNNCGGTACAGTTTAAGGATCC
ACATACAGTGCAATGGAGTGATCGAGGAGTGCTTATTGCTAAATGTTACGGCCCGTCAAT
GAACCATATGCTGAAGCTGTACGAGTACGGTGAGTGCGCATGGTTTGGTCTGCTATGGGC
TGGCTGCAGCGCGAAGGGCGAATTACCGAGACGGGACATTTATCGCATGGCTAACCGTGC
CTGTACGCAGAACTACCTGGTGCAGCGAACGTATTCTGTAGCTGCCCGCGTACGCACTCT
ACCTTNTGCCACGTCGAGTACGACCCGANTTGCATCTTGCGTTCTTCCGCCGCAGCCGAC
GAGAGCAACGATGGCCAGCTTCTCGAGCANATTGC

consensusID : consensus_8044#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 541
fasta sequence

                              [GGACGATCGTTTCTGTACCGTCAGGTGCGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGACCGGAGGTACTGGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAA]

[+] EMBL BX621644             [GGACGATCGTTTCTGTACCGTCAGGTGCGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCGGAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGACCGGAGGTACTGGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAA]




>consensus_8044#4
GGACGATCGTTTCTGTACCGTCAGGTGCGGCGCATGGTTGGTGCTTGGGTGGCTGCAGCG
GAAGGGCGAATTACCGAGCGGGACATTTATCGCATGCTAACCGTGCCGTCGCAGAACTCC
TGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTAC
GACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCCAGCTTTCT
CGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACCGTTACGTACAT
GGATGGTAGCCGTAAGATATTCCGCAACAATTGCGAAATCGATGCCCCGCCCCGGCTGGG
CTTCATCGTGGACAACAGTCCCGATCAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTA
CCTCGGTTCGCAGGACTGCGTGCGACCGGAGGTACTGGAGAAGTACGGCATCACACACGT
GCTCAGCGTTGGCATAGAAACGCCACCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCA
A

consensusID : consensus_8044#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 264
fasta sequence

                              [CCCCCAGGCNTTTACATATGCATGCTAACCGTGCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACGTTACGTACATGGATGGTAGCCGTAAGATATTCCGGCAAACAAAAATTGG]

[+] EMBL AL693786             [CCCCCAGGCNTTTACATATGCATGCTAACCGTGCGTCGCAGAACTCCTGGTGCAGCAACGTATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATCTTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCAGCTTTCTCGAGCAATTGCGCAATCGTAAAACGGAGCTGCAGCGCACAGAAACCACGTTACGTACATGGATGGTAGCCGTAAGATATTCCGGCAAACAAAAATTGG]




>consensus_8044#5
CCCCCAGGCNTTTACATATGCATGCTAACCGTGCGTCGCAGAACTCCTGGTGCAGCAACG
TATTTGTAGCGCCCGCGTACGCACTCTACCTTTGCCACGTCGAGTACGACCCGATTGATC
TTGCGTTTCCCGCCGCAGCCGACGAGAGCAACGATGGCAGCTTTCTCGAGCAATTGCGCA
ATCGTAAAACGGAGCTGCAGCGCACAGAAACCACGTTACGTACATGGATGGTAGCCGTAA
GATATTCCGGCAAACAAAAATTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8044#0      ------------------------------------------------------------
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      ------------------------------------------------------------
consensus_8044#3      GCAGATCGCCCGAGGTTTAAATCCACACTTCGCTATCAACGAATCGGCTTCTATGCCGGT 60
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      -----------------------------------------------------CCCC--G 5
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      -----------------------------CGCTTCCGCTATCGTAATCCATTCCTTG--G 29
consensus_8044#3      AATTATACGCGCCCGATGCGTGTACTTAACGCTTCCGCTATCGTAATCCATTCCTTGTGG 120
consensus_8044#2      ----------------------------------------------------CCGGGAGG 8
                                                                                  

consensus_8044#0      GAACGT-GTTCGCAGCACAACTCGCAACTGTAGTACAGTACCAAATAAACGGTGGCCCAT 64
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      CAAAGC-GCTCTATCTGACCATCGATGAATCGTTACTTAATCAACTTATCCTACATCGGC 88
consensus_8044#3      CAAAGC-GCTCTATCTGACCATCGATGAATCGTTACTTAATCAANCTATCCTACATCGGC 179
consensus_8044#2      CTTTGCTAAAGTTACGGCCCGTCAATGAACCATTGCTGAAGCTGTCGAGTCGA-ACGGAC 67
                                                                                  

consensus_8044#0      TCGTT-CGCAGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGT--CAGTTTAAGGATC 121
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      ACTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGCCGGT--CAGTTTAAGGATC 146
consensus_8044#3      ACTCGGTTTCGTGGCATTCAGCGCAAAATCGACAAATCTGNNCGGTACAGTTTAAGGATC 239
consensus_8044#2      ACGGGCGTGCATG---CGCTGCACAATACCGTCCACGTAGATTTG--CAGCGCCCGAATG 122
                                                                                  

consensus_8044#0      CACATACAGTGCAA-GGAGTGATCGAGGAGGCTTTGCT----AAAGTTACGGCCCGTCAA 176
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      CACATACAGTGCAA-GGAGTGATCGAGGAGGCTTTGCT----AAAGTTACGGCCCATCAA 201
consensus_8044#3      CACATACAGTGCAATGGAGTGATCGAGGAGTGCTTATTGCTAAATGTTACGGCCCGTCAA 299
consensus_8044#2      GA-AAACCGTACGA--TAGCGATCGTATAACCAAAACG-CTGAATCGTGCGTTCGAAAAA 178
                                                                                  

consensus_8044#0      TGAACCAT-TGCTGAAGCTGT-CGAGTC-GGTGAG-GCGCATGGTTGGTGCTT-----GG 227
consensus_8044#4      -GGACGAT-CGTT---TCTGT-ACCGTCAGGTGCG-GCGCATGGTTGGTGCTT-----GG 48
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      TGAACCAT-TGCTGAAGCTGT-CGAGTC-GGTGCG-GCGCATGGTTGGTGCTT-----GG 252
consensus_8044#3      TGAACCATATGCTGAAGCTGTACGAGTACGGTGAGTGCGCATGGTTTGGTCTGCTATGGG 359
consensus_8044#2      GATGGGCAATCTTTACGCATCCTCAGTACGGTGCGTGTTCCGGCTTCTTTTCAC----GC 234
                                                                                  

consensus_8044#0      GTGGCTGCAGCG-GAAGGGCGAAT-TACCGAG-CGGGACATTTAT-CGCATG-CTAACCG 282
consensus_8044#4      GTGGCTGCAGCG-GAAGGGCGAAT-TACCGAG-CGGGACATTTAT-CGCATG-CTAACCG 103
consensus_8044#5      -------------------------CCCCCAG-GCNTTTACATAT--GCATG-CTAACCG 31
consensus_8044#1      GTGGCTGCAGCG-GAAGGGCGAAT-TACCGAG-CGGGACATTTAT-CGCATG-CTAACCG 307
consensus_8044#3      CTGGCTGCAGCGCGAAGGGCGAAT-TACCGAGACGGGACATTTAT-CGCATGGCTAACCG 417
consensus_8044#2      ACGCCTGTGCGCCAAATCGCGTACGTACCTTTACCGGTTGGCGGTGCTGAAGAGGGAGTA 294
                                                 **               *    * *    *   

consensus_8044#0      TGCC-GT-CGCAGAACT-CCTGGTGCAGC--AACGTATT-TGTAGC-GCCCGCGTACGCA 335
consensus_8044#4      TGCC-GT-CGCAGAACT-CCTGGTGCAGC--AACGTATT-TGTAGC-GCCCGCGTACGCA 156
consensus_8044#5      TGC--GT-CGCAGAACT-CCTGGTGCAGC--AACGTATT-TGTAGC-GCCCGCGTACGCA 83
consensus_8044#1      TGCC-GT-CGCAGAACT-CCTGGTGCAGC--AACGTATT-TGTAGC-GCCCGCGTACGCA 360
consensus_8044#3      TGCCTGTACGCAGAACTACCTGGTGCAGCG-AACGTATTCTGTAGCTGCCCGCGTACGCA 476
consensus_8044#2      TGCCCGTGAGTCCGGCCGGCAGCAGCATCCGCACGCACGCTTCATT--CCGATCGAGGAG 352
                      ***  **  *     *   * *  *** *   *** *   *  *    **     * *  

consensus_8044#0      CTCTACCTTT-GCCACGTCG-AGTACGACCCGATTG--ATCT---TGCGTT-TCCCGCCG 387
consensus_8044#4      CTCTACCTTT-GCCACGTCG-AGTACGACCCGATTG--ATCT---TGCGTT-TCCCGCCG 208
consensus_8044#5      CTCTACCTTT-GCCACGTCG-AGTACGACCCGATTG--ATCT---TGCGTT-TCCCGCCG 135
consensus_8044#1      CTCTACCTTT-GCCACGTCG-AGTACGACCCGATTG--ATCT---TGCGTT-TCCCGCCG 412
consensus_8044#3      CTCTACCTTNTGCCACGTCG-AGTACGACCCGANTTGCATCT---TGCGTTCTTCCGCCG 532
consensus_8044#2      CACGATCGCT-GCTACTTTTTAGGACACTCGGAGTTTGATATAAACGCGTT-TGCTAGCG 410
                      * * * *    ** ** *   ** **   * ** *   ** *    ***** * *   **

consensus_8044#0      CAGCC--GACGAGAGCAACGATGGCCAGCTTTCTCGAGCAA-TTGCGCAACCGTAAAACG 444
consensus_8044#4      CAGCC--GACGAGAGCAACGATGGCCAGCTTTCTCGAGCAA-TTGCGCAATCGTAAAACG 265
consensus_8044#5      CAGCC--GACGAGAGCAACGATGGC-AGCTTTCTCGAGCAA-TTGCGCAATCGTAAAACG 191
consensus_8044#1      CAGCC--GACGAGAGCAACGATGGCCAGCTTTCTCGAGCAA-TTGCGCAATCGTAAAACG 469
consensus_8044#3      CAGCC--GACGAGAGCAACGATGGCCAGCTT-CTCGAGCANATTGC-------------- 575
consensus_8044#2      TTGCTCGGATGTTTGAAGGGATGCATGACTTTCGCACGTTCATGGC-CGTTGCTAAGGGC 469
                        **   ** *   * *  ****     *** * *  *    * **              

consensus_8044#0      GAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGC 504
consensus_8044#4      GAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGC 325
consensus_8044#5      GAGCTGCAGCGCACAGAAACCAC-GTTACGTACATGGATGGTAGCCGTAAGATATTCCG- 249
consensus_8044#1      GAGCTGCAGCGCACAGAAACCACCGTTACGTACATGGATGGTAGCCGTAAGATATTCCGC 529
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      AACCCAAGACAGCAGGAAGCGATGCATTCACTGAGACGCATCGACCAGATCACGGTTGAA 529
                                                                                  

consensus_8044#0      AACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGAT 564
consensus_8044#4      AACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGAT 385
consensus_8044#5      -GCAAACA-AAAATTGG------------------------------------------- 264
consensus_8044#1      AACAATTGCGAAATCGATGCCCCGCCCCGGCTGGGCTTCATCGTGGACAACAGTCCCGAT 589
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      AGGGGACACACGATGACGGCGGCTTTTAATAGGGAACGGACTGAGCACTACTATGACT-- 587
                                                                                  

consensus_8044#0      CAGGTGCCGGCCTGTATCGTTTCGCAATTTCTGTACCTGGGTTCGCAGGACTGCGTGCGA 624
consensus_8044#4      CAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGA 445
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      CAGGTGCCGGCCTGTATCGTGTCGCAATTTCTGTACCTCGGTTCGCAGGACTGCGTGCGA 649
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      CCGGAGGTGCTCGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCA 684
consensus_8044#4      CCGGAGGTACTGGAGAAGTACGGCATCACACACGTGCTCAGCGTTGGCATAGAAACGCCA 505
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      CCGGAGGTACTGGAGAAGTACGGCATCACACACGTGCT---------------------- 687
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      CCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAACAGTCCCGGATAGAAAGCCGGTTT 744
consensus_8044#4      CCGTTCGACGAGTGGCGAACAGAAGGCGAACAGCAA------------------------ 541
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      ------------------------------------------------------------
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      GTCGAGTGCTTGGATCTTCCGGAAACGAATCTGGCCGAGGTGCTGGTCAAAACGAACGCC 804
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      ------------------------------------------------------------
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      TTCATAGACGGCTGCAGGGCGTGCGGGGGGCGCGTACTGGTGCACTGCAATGCCGGCGTG 864
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      ------------------------------------------------------------
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      TCTAGGTCGACGTCGGTGGTTGTGGGCTACCTGATGGAGCGGTGTGATCAATCGTTCATG 924
consensus_8044#4      ------------------------------------------------------------
consensus_8044#5      ------------------------------------------------------------
consensus_8044#1      ------------------------------------------------------------
consensus_8044#3      ------------------------------------------------------------
consensus_8044#2      ------------------------------------------------------------
                                                                                  

consensus_8044#0      CAGGCATTCGGAACGGTCAAGAGCAAGAGAACCATGCGT 963
consensus_8044#4      ---------------------------------------
consensus_8044#5      ---------------------------------------
consensus_8044#1      ---------------------------------------
consensus_8044#3      ---------------------------------------
consensus_8044#2      ---------------------------------------