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Anopheles gambiae
cluster # 8066 cluster # 8066       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8066#0 length = 883 sequences # 5  
consensus_8066#1 length = 721 sequences # 2  
consensus_8066#2 length = 665 sequences # 1  
consensus_8066#3 length = 543 sequences # 1  

consensusID : consensus_8066#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 883
fasta sequence
                              [CCGGTACAATTACAGTTCCGCGATCACTGACGCCCAAACGGGACGCCACACTTTCG--------CCTCATTAAAATCAATCGTTCGGTAACCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGTATCACTTCCAAAGCGTTAGTGGTGGAAGCAAGCGAAGGGTGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAA-TAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATCACATTATCCAACAAACACACATCGAATCGAAGTACATCTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAAGCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCCACTGGAACNGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGGTTTTAGTGGNATATTTAGTTACATCATAATAGCTAATACGCCC]

[+] EMBL BM620886             [CCGGTACAATTACAGTTCCGCGATCACTGACGCCCGAACGGGACGCCACACTTTCGCTGCTGATCCTCATTAAAATTAATCGTTCGGCACCCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGCATCACTTCCAAAGCATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGATCTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTGAAATCTGCCCAATGTTTGAA CAATTGGAACGGCTGGAAGTGCCAGTACTAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGCAACGAAACAACCCCACATCAGAGGCGTTGGACATGCTATTTGCAATAAAATCCCAACGAATCACATTATCCAACAAACACACATCGAATCGca                                                                                                                                                                                                                                     ]
[+] EMBL BM601956             [      ccgTTACAGTTCCGCGATCACTGACGCCCAAACGGGACGCCACACTTTCG        CCTCATTAAAATCAATCGTTCGGTAACCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGTATCACTTCCAAAGCGTTAGTGGTGGAAGCAAGCGAAGGGTGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGAAGTTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX629269             [                                  CAAACGGGACGCCACACTTTCG        CCTCATTAAAATCAATCGTTCGGTAACCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGTATCACTTCCAAAGCGTTAGTGGTGGAAGCAAGCGAAGGGTGCGAGTGGCATTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAA TAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATCACATTATCCAACAAACACACATCGAATCGAAGTACATCTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAAGCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCCACTGGAACNGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGGTTTTAGTGGNATATTTAGTTACATCATAATAGCTAATACGCCC]
[+] EMBL BX629162             [                                            GCCACACTTTCG        CCTCATTAAAATCAATCGTTCGGTAACCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGTATCACTTCCAAAGCGTTAGTGGTGGAAGCAAGCGAAGGGTGCGAGTGGCATTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAA TAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATCACATTATCCAACAAACACACATCGAATCGAAGTACATCTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAAGCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCCACTGGAACNGACAAAGCAGTGCGCGGGGATGGCGAATGATGC                                              ]
[+] EMBL BM620454             [                                                                     ccgAAATCAATCGTTCGGTAACCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGTATCACTTCCAAAGCGTTAGTGGTGGAAGCAAGCGAAGGGTGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAA TAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATCACATTATCCAACAAACACACATCGAATCGAAGTACATCTGACACCACTAAACCAATCGGACGGAAATC                                                                                                                                                                                                ]


>consensus_8066#0 CCGGTACAATTACAGTTCCGCGATCACTGACGCCCAAACGGGACGCCACACTTTCGCCTC ATTAAAATCAATCGTTCGGTAACCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTG GTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGTA TCACTTCCAAAGCGTTAGTGGTGGAAGCAAGCGAAGGGTGCGAGTGGCAGTACGCGTGCT GCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGT GTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCG TGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTT TTGAAGAACTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTCAAATCTC TCCAATGTTTGAAGCAATAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTG AAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAAT TTGCAATAAAATCCCAACGAATCACATTATCCAACAAACACACATCGAATCGAAGTACAT CTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCT CACTCACCCCAGCAAGCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATT GACCGGGAACGGTCCACTGGAACNGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGG TTTTAGTGGNATATTTAGTTACATCATAATAGCTAATACGCCC



consensusID : consensus_8066#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 721
fasta sequence
                              [TCGAGGCAGAATCGCCACGAGNTTGATCACTGACGCCCGAACGGGACGCCACACTTTCGCTGCTGATCCTCATTAAAATTAATCGTATCGGCACCCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGATGGTCTGCGTTCTATGGCTAAGCTGCATCACTTCCAAAGCATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGNGATCCGGTCAGGATACAGCTCGCCGGAAAGTGATCGTGACCGCGACCCTGCANTGAAGGCTACCGGCGTGATCATACTCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGACGGTTGAAATCTCTCCAATGTTTGAACAAATGGAACGGTTGGAAGTGCCGGTACCAAAACTATCCTTCCGTAGTAAAATAGCGGAGCTAGTGGCAACGAAACAACCCCACATCAGAGGCGTTGGACATGCTATTTGCATTAAAATCCCAACGAATCACATTATCCAACAAACACACATTCGAATCGAAGTACATTTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGC]

[+] EMBL BX466497             [TCGAGGCAGAATCGCCACGAGNTTGATCACTGACGCCCGAACGGGACGCCACACTTTCGCTGCTGATCCTCATTAAAATTAATCGTATCGGCACCCCACCGGGGGTTGCATCCCCAACGATGGCAGCTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGATGGTCTGCGTTCTATGGCTAAGCTGCATCACTTCCAAAGCATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGNGATCCGGTCAGGATACAGCTCGCCGGAAAGTGATCGTGACCGCGACCCTGCANTGAAG                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM654146             [                                   CCGGAACGGGACGCCACACTTTCGCTGCTGATCCTCATTAAAATCAATCGT TCGGCAACCCACCGGGGGTTGCATCCCCAACGATGACAGCTAGTGGTTTATGTCGCAGCAAGAAGGTGGCTTTCCTAG TGGTCTGCGTTCTATGGCTAAGTTGTATCACTTCCAAAGCATTAGTGGTGAAAGCGGGCGAAGGGTGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACA CTCGCC GAAAGTGATCGTGACCGC ACCCTGCAATGAAGGCTACCGGCGTGATCATACTCAGCGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGACGGTTGAAATCTCTCCAATGTTTGAACAAATGGAACGGTTGGAAGTGCCGGTACCAAAACTATCCTTCCGTAGTAAAATAGCGGAGCTAGTGGCAACGAAACAACCCCACATCAGAGGCGTTGGACATGCTATTTGCATTAAAATCCCAACGAATCACATTATCCAACAAACACACATTCGAATCGAAGTACATTTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGC]


>consensus_8066#1 TCGAGGCAGAATCGCCACGAGNTTGATCACTGACGCCCGAACGGGACGCCACACTTTCGC TGCTGATCCTCATTAAAATTAATCGTATCGGCACCCCACCGGGGGTTGCATCCCCAACGA TGGCAGCTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGATGGTCTGCGTTCTA TGGCTAAGCTGCATCACTTCCAAAGCATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGG CAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAG CCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGNGATCCGGTCAGGATACAGCTC GCCGGAAAGTGATCGTGACCGCGACCCTGCANTGAAGGCTACCGGCGTGATCATACTCAG CGGTGTCGGAAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTCTGACGGTTGAAATC TCTCCAATGTTTGAACAAATGGAACGGTTGGAAGTGCCGGTACCAAAACTATCCTTCCGT AGTAAAATAGCGGAGCTAGTGGCAACGAAACAACCCCACATCAGAGGCGTTGGACATGCT ATTTGCATTAAAATCCCAACGAATCACATTATCCAACAAACACACATTCGAATCGAAGTA CATTTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGG C



consensusID : consensus_8066#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [CAAGAATCGGCACGATGGAAGTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAATAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATCTCATTATCCAACAAACACACATCGAATCGGAGTACATCTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAAGCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCCACTGGAACGGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGGTTTTAGTGGAATATTTAGTTACATCATAATAGCTAATACGCCCTGTAATCTTATTGGTTTTGGCAGGTTAAAGTTTCCTATGTCAACTGAGGGTTTAGTTGTTGCTGTTGCTATTGTTGGCTACTGCTGGCTTGCTGGTTGACTCACGCCCAGTCGCGACCAGGAACTGGATTTGTATTTAATCCGTAGCCTTAAGTTAGATTTCACTCCTGGCCCCTTCTGTCAACGCCCCACGTTCAACTGGCAGGCAAGGAACGTGT]

[+] EMBL BX469880             [CAAGAATCGGCACGATGGAAGTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAATAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCTAGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATCTCATTATCCAACAAACACACATCGAATCGGAGTACATCTGACACCACTAAACCAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAAGCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCCACTGGAACGGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGGTTTTAGTGGAATATTTAGTTACATCATAATAGCTAATACGCCCTGTAATCTTATTGGTTTTGGCAGGTTAAAGTTTCCTATGTCAACTGAGGGTTTAGTTGTTGCTGTTGCTATTGTTGGCTACTGCTGGCTTGCTGGTTGACTCACGCCCAGTCGCGACCAGGAACTGGATTTGTATTTAATCCGTAGCCTTAAGTTAGATTTCACTCCTGGCCCCTTCTGTCAACGCCCCACGTTCAACTGGCAGGCAAGGAACGTGT]


>consensus_8066#2 CAAGAATCGGCACGATGGAAGTTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGC AATAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTCCGTTGAAGAATAACGGAGCT AGTGGGAACCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCC AACGAATCTCATTATCCAACAAACACACATCGAATCGGAGTACATCTGACACCACTAAAC CAATCGGACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAA GCAAAACCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCC ACTGGAACGGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGGTTTTAGTGGAATATT TAGTTACATCATAATAGCTAATACGCCCTGTAATCTTATTGGTTTTGGCAGGTTAAAGTT TCCTATGTCAACTGAGGGTTTAGTTGTTGCTGTTGCTATTGTTGGCTACTGCTGGCTTGC TGGTTGACTCACGCCCAGTCGCGACCAGGAACTGGATTTGTATTTAATCCGTAGCCTTAA GTTAGATTTCACTCCTGGCCCCTTCTGTCAACGCCCCACGTTCAACTGGCAGGCAAGGAA CGTGT



consensusID : consensus_8066#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 543
fasta sequence
                              [AATCGCCCGAGGTTNGAACGGGACGCCACACTTTCGCTGCTGATCTCATTAAAATTAATCGTTCGGCACCCCACCGGGGGTTGCATCCCCAACGATGGCAGNTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGCATCACTTCCAAAGCATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGATCTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTGAAATCTGCCCAATGTTTGAACAATTGGAACGGCTGGAAGTGCCAGTACTAAAACTATCCTTCCGTTGAAGAATAACGGAGCTA]

[+] EMBL AL931925             [AATCGCCCGAGGTTNGAACGGGACGCCACACTTTCGCTGCTGATCTCATTAAAATTAATCGTTCGGCACCCCACCGGGGGTTGCATCCCCAACGATGGCAGNTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGCATCACTTCCAAAGCATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTGCAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGATCTTGTCTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTGAAATCTGCCCAATGTTTGAACAATTGGAACGGCTGGAAGTGCCAGTACTAAAACTATCCTTCCGTTGAAGAATAACGGAGCTA]


>consensus_8066#3 AATCGCCCGAGGTTNGAACGGGACGCCACACTTTCGCTGCTGATCTCATTAAAATTAATC GTTCGGCACCCCACCGGGGGTTGCATCCCCAACGATGGCAGNTAGTGGTTTGTGTCGCAA GAATAAGGATGCTTTCCTAGTGGTCTGCGTTCTATGGCTAAGCTGCATCACTTCCAAAGC ATTAGTGGTGGAAGCGGGCGAAGGATGCGAGTGGCAGTACGCGTGCTGCGAGTGGGTTCA AGTGAACGGATCGTGCAAAAGCCTCTGCCCGAAGCCAACCATTGTGTGTCCGGCGGAAGA AACAAGCACCAGCGATCCGGTCAGGATACACTCGCCGAAAGTGATCGTGACCGCACCCTG CAATGAAGGCTACCGGCGTGATCATACCCAGCGGTGTCGGAAAATTTTTGAAGATCTTGT CTATTTCTGAGATCTTCTGAAGTTTGTGTTCTGAAGGTTGAAATCTGCCCAATGTTTGAA CAATTGGAACGGCTGGAAGTGCCAGTACTAAAACTATCCTTCCGTTGAAGAATAACGGAG CTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8066#1      TCGAGGCAGAATCGCCACGAGNTTGATCACT-GACGCC-CGAACGGGACGCCACACTTTC 58
consensus_8066#3      ------------------------AATCGCCCGAGGTT-NGAACGGGACGCCACACTTTC 35
consensus_8066#0      ---CCGGTACAATTACAGTTCCGCGATCACT-GACGCC-CAAACGGGACGCCACACTTTC 55
consensus_8066#2      ---------------CAAGAATCGGCACGATGGAAGTTGTGTTCTGAAGGTTCAAATCTC 45
                                                 *    ** *       * * * *    * * **

consensus_8066#1      GCTGCTGATCCTCATTAAAATTAATCGTATCGGCACCCCACCGGGGGTTGCATCCCCAAC 118
consensus_8066#3      GCTGCTGATC-TCATTAAAATTAATCGT-TCGGCACCCCACCGGGGGTTGCATCCCCAAC 93
consensus_8066#0      GCC--------TCATTAAAATCAATCGT-TCGGTAACCCACCGGGGGTTGCATCCCCAAC 106
consensus_8066#2      TCCAATG---TTTGAAGCAATAGAACGGCTGGAAGTGCCAGTACCAAAACTATCCTTC-C 101
                       *         *      ***  * **  * *     ***           ****    *

consensus_8066#1      GATGGCAGCTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAGATGGTCTGCGTTC 178
consensus_8066#3      GATGGCAGNTAGTGGTTTGTGTCGCAAGAATAAGGATGCTTTCCTAG-TGGTCTGCGTTC 152
consensus_8066#0      GATGGCAGCTAGTGGTTTGTGTCGCAAGAAGAAGAATGCTTTCCTAG-TGGTCTGCGTTC 165
consensus_8066#2      GTTGAAGAATAACGGAGCTAGTGGGAACCA-AACAACCCGACATCAG-----AGGCGTTG 155
                      * **     **  **     ** * **  * **  *  *      **       ***** 

consensus_8066#1      TATGGCTAAGCTGCATCAC--TTCCAAAGCAT-TAGTGGTGGAAGCGGGCGAAGGATGCG 235
consensus_8066#3      TATGGCTAAGCTGCATCAC--TTCCAAAGCAT-TAGTGGTGGAAGCGGGCGAAGGATGCG 209
consensus_8066#0      TATGGCTAAGCTGTATCAC--TTCCAAAGCGT-TAGTGGTGGAAGCAAGCGAAGGGTGCG 222
consensus_8066#2      GACATGCAATTTGCAATAAAATCCCAACGAATCTCATTATCCAA-CAAACACACAT--CG 212
                       *     **  ** *  *   * **** *  * *  *  *  ** *   *  *     **

consensus_8066#1      AGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCC 295
consensus_8066#3      AGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCC 269
consensus_8066#0      AGTGGCAGTACGCGTGCTGCGAGTGGGTTCAAGTGAACGGATCGTGCAAAAGCCTCTGCC 282
consensus_8066#2      AATCGGAGTACATCTGACACCACTAAAC-CAATCGGACGGAAATCGGCAAAGTGTGTCCT 271
                      * * * *****   **   * * *     ***  * *****    *  ****  * * * 

consensus_8066#1      -CGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGNGATCCGGTCAGGATA 354
consensus_8066#3      -CGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATA 328
consensus_8066#0      -CGAAGCCAACCATTGTGTGTCCGGCGGAAGAAACAAGCACCAGCGATCCGGTCAGGATA 341
consensus_8066#2      GCGCATCGCGGCCTCACTCACCCCA-GCAAGCAAAACCCATCACAGCAACGTGCAGCCTT 330
                       ** * *    * *       **   * *** ** *  ** **  *   **  ***  * 

consensus_8066#1      CAGCTCGCCGGAAAGTGATCGTGACCGCGACCCTGCANTGAAGGCTACCG-GCGTGATCA 413
consensus_8066#3      CA-CTCGCCG-AAAGTGATCGTGACCGC-ACCCTGCAATGAAGGCTACCG-GCGTGATCA 384
consensus_8066#0      CA-CTCGCCG-AAAGTGATCGTGACCGC-ACCCTGCAATGAAGGCTACCG-GCGTGATCA 397
consensus_8066#2      CG-GTAATCGTACATTGACCGGGAACGGTCCACTGGAACGGACAAAGCAGTGCGCGGGGA 389
                      *   *   ** * * *** ** ** **   * *** *  * *     * * *** *   *

consensus_8066#1      TACTCAGCGGTGTCGG-------AAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTC 466
consensus_8066#3      TACCCAGCGGTGTCGG-------AAAATTTTTGAAGATCTTGTCTATTTCTGAGATCTTC 437
consensus_8066#0      TACCCAGCGGTGTCGG-------AAAATTTTTGAAGAACTTGTCTATTTCTGAGATCTTC 450
consensus_8066#2      TGGCGAATGATGCTGGTTTTAGTGGAATATTTAGTTACATCATA-ATAGCTAATACGCCC 448
                      *    *  * **  **         *** ***    *  *  *  **  ** * *    *

consensus_8066#1      TGACG------------------GTTGAAATCTCTCCAATGTTTGAACAAATGGAACGGT 508
consensus_8066#3      TGAAGT----TTGTGTTCTGAAGGTTGAAATCTGCCCAATGTTTGAACAATTGGAACGGC 493
consensus_8066#0      TGAAGT----TTGTGTTCTGAAGGTTCAAATCTCTCCAATGTTTGAAGCAATAGAACGGC 506
consensus_8066#2      TGTAATCTTATTGGTTTTGGCAGGTTAAAGTTT--CCTATGTC--AACTGAGGGTTTAGT 504
                      **                     *** ** * *  ** ****   **      *    * 

consensus_8066#1      TGGAAGTGCCGGTACCAA-AACTATCCTTCCGTAGTAAAATAGCGGAG--CTAGTGGCAA 565
consensus_8066#3      TGGAAGTGCCAGTACTAA-AACTATCCTTCCGTTGAAGAATAACGGAG--CTA------- 543
consensus_8066#0      TGGAAGTGCCAGTACCAA-AACTATCCTTCCGTTGAAGAATAACGGAG--CTAGTGGGAA 563
consensus_8066#2      TGTTGCTGTTGCTATTGTTGGCTACTGCTGGCTTGCTGGTTGACTCACGCCCAGTCGCGA 564
                      **    **    **       ***    *   * *     *  *  *   * *       

consensus_8066#1      CGAAACAACCCCACATCAGAGGCGTTGGACATGCTATTTGCATTAAAATCCCAACGAATC 625
consensus_8066#3      ------------------------------------------------------------
consensus_8066#0      CCAAACAACCCGACATCAGAGGCGTTGGACATGCAATTTGCAATAAAATCCCAACGAATC 623
consensus_8066#2      CCAGGAACTGGATTTGTATTTAATCCGTAGCCTTAAGTTAGATTTCACTCCTGGCCCCTT 624
                                                                                  

consensus_8066#1      ACATTATC-CAACAAACACACATTCGAATCGAAGTACATTTGACACCACTAAACCAATCG 684
consensus_8066#3      ------------------------------------------------------------
consensus_8066#0      ACATTATC-CAACAAACACACAT-CGAATCGAAGTACATCTGACACCACTAAACCAATCG 681
consensus_8066#2      CTGTCAACGCCCCACGTTCAACTGGCAGGCAAGGAACGTGT------------------- 665
                                                                                  

consensus_8066#1      GACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGC----------------------- 721
consensus_8066#3      ------------------------------------------------------------
consensus_8066#0      GACGGAAATCGGCAAAGTGTGTCCTGCGCATCGCGGCCTCACTCACCCCAGCAAGCAAAA 741
consensus_8066#2      ------------------------------------------------------------
                                                                                  

consensus_8066#1      ------------------------------------------------------------
consensus_8066#3      ------------------------------------------------------------
consensus_8066#0      CCCATCACAGCAACGTGCAGCCTTCGGTAATCGTACATTGACCGGGAACGGTCCACTGGA 801
consensus_8066#2      ------------------------------------------------------------
                                                                                  

consensus_8066#1      ------------------------------------------------------------
consensus_8066#3      ------------------------------------------------------------
consensus_8066#0      ACNGACAAAGCAGTGCGCGGGGATGGCGAATGATGCTGGTTTTAGTGGNATATTTAGTTA 861
consensus_8066#2      ------------------------------------------------------------
                                                                                  

consensus_8066#1      ----------------------
consensus_8066#3      ----------------------
consensus_8066#0      CATCATAATAGCTAATACGCCC 883
consensus_8066#2      ----------------------
                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)