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Anopheles gambiae
cluster # 8115 cluster # 8115       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8115#0 length = 956 sequences # 2  
consensus_8115#1 length = 926 sequences # 4  
consensus_8115#2 length = 672 sequences # 2  
consensus_8115#3 length = 638 sequences # 1  

consensusID : consensus_8115#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 956
fasta sequence
                              [GAGATGGCCGTAGCAAAACAAAGGAAGCAGAGGTAGCAGCAGTAGCAGAACACGGCAAGCCGCCTGTTATTGAGCCTGGACGTTGTGTCCTGCGTTTCCGGTGCATCGTCAACCCTGTGCTGCAGGGCCCCACACTATTTCGCTTTGGTCGCCAGGGCACAGGGTAAAGCGCGAAATGCTTCATTCGAGCAGAGGGTAGAGTTGGAAGTTTCACACGCACACACATCTTTTAAAACGCCGCCAATCGCCAACCGCGTTTCGCAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGACGTGCGACGAGGTGGTCGCAGGGGGAGCGTTAAAGGGAGAGAGGTTCACCCCTCCCCCCGGGAACAGGTGCTTCCAGTGGGAGGGGAGGGGAGGGGCGAGGGGGATTCGTGGAGCGTTCGTTCGTAACATTTAGCCATTTTACCGTGATTGATACGCACAAAGCAGATAGTTCCGTGGTTACAAATTTAGCAGCAAGAAGTTTCATTTGCCACATAAAGTGTGTGCCGCGTTAGGGAGCGGCAGTGCAATGCACATGTTTTGAGGGGGGAAGGGGAGGGTGGGAGTTGGGGGTATACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCACTCTCTCGCTCTTTCTCCCCGCTAATTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAG-AAACAAGCTGCCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAAAAAAAAAAAAAAAAAAAAAGGCCACATG]

[+] EMBL CNS09BWD             [GAGATGGCCGTAGCAAAACAAAGGAAGCAGAGGTAGCAGCAGTAGCAGAACACGGCAAGCCGCCTGTTATTGAGCCTGGACGTTGTGTCCTGCGTTTCCGGTGCATCGTCAACCCTGTGCTGCAGGGCCCCACACTATTTCGCTTTGGTCGCCAGGGCACAGGGTAAAGCGCGAAATGCTTCATTCGAGCAGAGGGTAGAGTTGGAAGTTTCACACGCACACACATCTTTTAAAACGCCGCCAATCGCCAACCGCGTTTCGCAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGACGTGCGACGAGGTGGTCGCAGGGGGAGCGTTAAAGGGAGAGAGGTTCACCCCTCCCCCCGGGAACAGGTGCTTCCAGTGGGAGGGGAGGGGAGGGGCGAGGGGGATTCGTGGAGCGTTCGTTCGTAACATTTAGCCATTTTACCGTGATTGATACGCACAAAGCAGATAGTTCCGTGGTTACAAATTTAGCAGCAAGAAGTTTCATTTGCCACATAAAGTGTGTGCCGCGTTAGGGAGCGGCAGTGCAATGCACATGTTTTGAGGGGGGAAGGGGAGGGTGGGAGTTGGGGGTATACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCACTCTCTCGCTCTTTCTCCCCGCTAATTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAG AAACAAGCTGCCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAAAAAAAAAAAAAAAAAAAAAGGCCACATG]
[-] EMBL CNS09BWE             [                                                                                                                                                                                   TTCATTCGAGCAGAGGGTAGAGTTGGAAGTTTTAAACGGACACACATTTTTTAAAACGCCGCCAATCGCCAACCGCGTTTCGCAGTAGCTAGATTACAACATTCGGCCAAACCAACTCGACGTGCGACGAGGTGGTCGCAGGGGGAGCGTTAAAGGGAGAGAGGTTCACCCCTCCCCCCGGGAACAGGTGCTTCCAGTGGGAGGGGAGGGGAGGGGCGAGGGGGATTCGTGGAGCGTTCGTTCGTAACATTTAGCCATTTTACCGTGATTGATACGCACAAAGCAGATAGTTCCGTGGTTACAAATTTAGCAGCAAGAAGTTTCATTTGCCACATAAAGTGTGTGCCGCGTTAGGGAGCGGCAGTGCAATGCACATGTTTTGAGGGGGGAAGGGGAGGGTGGGAGTTGGGGGTATACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTTACTTTCTCGCTCTTTCTCCCCGCTAATTCTTTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGGAAAAAATTTTACAAATAAGAAGAAAACAAGCTGCCGATATGTATAGGCAATGTTTGT                                                  ]


>consensus_8115#0 GAGATGGCCGTAGCAAAACAAAGGAAGCAGAGGTAGCAGCAGTAGCAGAACACGGCAAGC CGCCTGTTATTGAGCCTGGACGTTGTGTCCTGCGTTTCCGGTGCATCGTCAACCCTGTGC TGCAGGGCCCCACACTATTTCGCTTTGGTCGCCAGGGCACAGGGTAAAGCGCGAAATGCT TCATTCGAGCAGAGGGTAGAGTTGGAAGTTTCACACGCACACACATCTTTTAAAACGCCG CCAATCGCCAACCGCGTTTCGCAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGAC GTGCGACGAGGTGGTCGCAGGGGGAGCGTTAAAGGGAGAGAGGTTCACCCCTCCCCCCGG GAACAGGTGCTTCCAGTGGGAGGGGAGGGGAGGGGCGAGGGGGATTCGTGGAGCGTTCGT TCGTAACATTTAGCCATTTTACCGTGATTGATACGCACAAAGCAGATAGTTCCGTGGTTA CAAATTTAGCAGCAAGAAGTTTCATTTGCCACATAAAGTGTGTGCCGCGTTAGGGAGCGG CAGTGCAATGCACATGTTTTGAGGGGGGAAGGGGAGGGTGGGAGTTGGGGGTATACATTT TGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAG GGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGAC GGCTGAAACTTTCTCCCCTCTCTCCCTCTCACTCTCTCGCTCTTTCTCCCCGCTAATTCT CTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGC AGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGCCGATATGTATAGGCAAT GTTTGTATCTAATCTTTGTACCCAGCAAAAAAAAAAAAAAAAAAAAAGGCCACATG



consensusID : consensus_8115#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 926
fasta sequence
                              [CCGCGGACGCGTGGGCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCTAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAA--------A--TGTGTGTGTGTGTGTA-TGTGGTTTGGTTAACCTGATGCAAGGACGATGCATTTCACAAGCAAACATACATAGAAGAAGCAAAAACAATTACGACTCACTGTCCGGAGGATGAAAACGAACAGCTACGGTAAAACATTCACACATTCACTGTAACACACGCAAGCACACACACACACACCACGGGTAGGGGTGGTATCCTTGACCGGGATACGGTAAGGACGACCGGGGCGAGGTGTGCAGGCTAACCGTTATGCCCGGGTTGTGCAGAATGCACGGATGCGTTTGAATAGATTAGTAAGATTTCTAAAAGAAAACCCGCCAGGCAGTGCTCCGACGTGTGTTAGATAAAGAGAATTGAGACGGGAAGCAAACGACATACATATACACACACATCTACAGACACGCAATCCATAAATAATCCGATATTTTAAGGTTTAATATTAAT]

[+] EMBL BM613414             [CCGCGGACGCGTGGGCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCTAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAA        A  TGTGTGTGTGTGTGTA TGTGGTTTGGTTAACCTGATGCAAGGACGATGCATTTCACAAGCAAACATA                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX621270             [                                                  GTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGCCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCTAACGTTTCTTCACTTGTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTATCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAAGTGTGTGTG  TGTGTGTGTGTGTGTATTGTGGTTTGGTTAACCTGATGCAAGGACGATGCATTTCACAAGCAAACATACATAGAAGAAGCAAAAACAATTACGACTCACTGTCCGGAGGACGAAAACGCACAGCTACGGTAAAACATTCACACATTCACT                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM607068             [                                                                                                                                                                                                                                      ccGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAA        ATGTGTGTGTGTGTGTGTA TGTGGTTTGGTTAACCTGATGCAAGGACGATGCATTTCACAAGCAAACATACATAGAAGAAGCAAAAACAATTACGACTCACTGTCCGGAGGATGAAAACGAACAGCTACGGTAAAACATTCACACATTCACTGTAACACACGCAAGCACACACACACACACCACGGGTAGGGGTGGTATCCTTGACCGGGATACGGTAAGGACGACCGGGGCGAGGTGTGCAGGCTAACCGTTATGCCCGGGTTGTGCAGAATGCACGGATGCGTTTGAATAGATTAGTAAGATTTCTAAAAGAAAACCCGCCAGGCAGTGCTCCGACGTGTGTTAGATAAAGAGAATTGAGACGGGAAGCAAACGACATACATATACACACACATCTACAGACACGCAATCCATAAATAATCCGATATTTTAAGGTTTAATATTAAT]
[+] EMBL BX611110             [                                                                                                                                                                                                                                                                                                      CATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAA        ATGTGTGTGTGTGTGTGTA TGTGGTTTGGTTAACCTGATGCAAGGACGATGCATTTCACAAGCAAACATACATAGAAGAAGCAAAAACAATTACGACTCACTGTCCGGAGGATGAAAACGAACAGCTACGGTAAAACATTCACACATTCACTGTAACACACGCAAGCACACACACACACACCACGGGTAGGGGTGGTATCCTTGACCGGGATACGGTAAGGACGACCGGGGCGAGGTGTGCAGGCTAACCGTTATGCCCGGGTTGTGCAGAATGCACGGATGCGTTTGAATAGATTAGTAAGATTTCTAAAAGAAAACCCGCCAGGCAGTGCTCCGACGTGTGTTAGATAAAGAGAATTGAGACGGGAAGCAAACGACATACATATACACACACATCTACAGACACGCAATCCATAAATAATCCGATATTTTAGGTTTTAATATTAAT]


>consensus_8115#1 CCGCGGACGCGTGGGCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAA CACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAA CAAGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGA GCTAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGT AACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTG TCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAA ATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTT ACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAA ATGTGTGTGTGTGTGTATGTGGTTTGGTTAACCTGATGCAAGGACGATGCATTTCACAAG CAAACATACATAGAAGAAGCAAAAACAATTACGACTCACTGTCCGGAGGATGAAAACGAA CAGCTACGGTAAAACATTCACACATTCACTGTAACACACGCAAGCACACACACACACACC ACGGGTAGGGGTGGTATCCTTGACCGGGATACGGTAAGGACGACCGGGGCGAGGTGTGCA GGCTAACCGTTATGCCCGGGTTGTGCAGAATGCACGGATGCGTTTGAATAGATTAGTAAG ATTTCTAAAAGAAAACCCGCCAGGCAGTGCTCCGACGTGTGTTAGATAAAGAGAATTGAG ACGGGAAGCAAACGACATACATATACACACACATCTACAGACACGCAATCCATAAATAAT CCGATATTTTAAGGTTTAATATTAAT



consensusID : consensus_8115#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 672
fasta sequence
                              [CCGCGGACGCTGGGTACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCCCTCTCTCTTTCTCTCCCGCCCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCTAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAAATGTGTGTGTGTGTG]

[+] EMBL BM598919             [CCGCGGACGCTGGGTACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCCCTCTCTCTTTCTCTCCCGCCCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCTAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTA                                                                                                                                                       ]
[+] EMBL BM620656             [                        ccgGGGAATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACGCGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCCCTCTCTCTTTCTCTCCCGCCCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAAGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCTAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAACATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATAATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAAATGTGTGTGTGTGTG]


>consensus_8115#2 CCGCGGACGCTGGGTACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCG CGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACG CGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCCCTCTCTCT TTCTCTCCCGCCCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACAC TAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAACAA GCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGCT AACGTTTCTTCACTTTTCTGCCTGTAAAGAGCGCCAAACATAAGGAAGGGGTGGTGTAAC ATTAATTACGACCATTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCATGTGTCT ACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTGCGAAATA ATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTTGTTGTTCCTTTACA TGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCGCGCGCAAATG TGTGTGTGTGTG



consensusID : consensus_8115#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence
                              [CCGATCTTTTAAAACGCCGCCAATCGCCAACCGCGTTTCGCAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGACGTGCGACGAGGTGGTCGCAAGGGGAGCGAGCCGATGTTGCCAAGGGATGGTGGGTGGAAGAGGGGGGCGGTGTAGCGGACGGAGAGGCCGAGGAGGATGAGGTGTGGACGAACCGACGGTATCGAATAGAGAAAGTTATGCTGAATGCAATATTTTCTATGCAATTTTAAGCGAGCGTAGGGACGGGCTGGAAATGGCAGAAAAGAAAGAAGATTCTAACAAACGAACGAAAAAAAGAGAAAAACCACAAAACTTATCAAACGCTTCTACGAGCTTCGGCTTTATCCAACGAAACTGAGAGCAAATTTGTAAGGGAAGGTAACGTCACAAAAAAAAAGTTCTAAAATGCATGGAATGTAAACAGCAAAAGCAATAACGATACAATTGGTGATTGATTTCGTTTCCATTTTCTCCAACACGGCTCTTCTTGCGAGAGGATTAAAATGACCAACAAGAATCCAATATCAAATTCTTATTCGTAATACGCTCCAAGAGCTGTTCTGTTAATGGGCGCCCTACTTTTTACTTTTGTTAGTAGTAGCTGCTAAAGCGAAGCACT]

[+] EMBL BM604481             [CCGATCTTTTAAAACGCCGCCAATCGCCAACCGCGTTTCGCAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGACGTGCGACGAGGTGGTCGCAAGGGGAGCGAGCCGATGTTGCCAAGGGATGGTGGGTGGAAGAGGGGGGCGGTGTAGCGGACGGAGAGGCCGAGGAGGATGAGGTGTGGACGAACCGACGGTATCGAATAGAGAAAGTTATGCTGAATGCAATATTTTCTATGCAATTTTAAGCGAGCGTAGGGACGGGCTGGAAATGGCAGAAAAGAAAGAAGATTCTAACAAACGAACGAAAAAAAGAGAAAAACCACAAAACTTATCAAACGCTTCTACGAGCTTCGGCTTTATCCAACGAAACTGAGAGCAAATTTGTAAGGGAAGGTAACGTCACAAAAAAAAAGTTCTAAAATGCATGGAATGTAAACAGCAAAAGCAATAACGATACAATTGGTGATTGATTTCGTTTCCATTTTCTCCAACACGGCTCTTCTTGCGAGAGGATTAAAATGACCAACAAGAATCCAATATCAAATTCTTATTCGTAATACGCTCCAAGAGCTGTTCTGTTAATGGGCGCCCTACTTTTTACTTTTGTTAGTAGTAGCTGCTAAAGCGAAGCACT]


>consensus_8115#3 CCGATCTTTTAAAACGCCGCCAATCGCCAACCGCGTTTCGCAGTAGCTAGATAACAACAT TCGGCCAAACCAACTCGACGTGCGACGAGGTGGTCGCAAGGGGAGCGAGCCGATGTTGCC AAGGGATGGTGGGTGGAAGAGGGGGGCGGTGTAGCGGACGGAGAGGCCGAGGAGGATGAG GTGTGGACGAACCGACGGTATCGAATAGAGAAAGTTATGCTGAATGCAATATTTTCTATG CAATTTTAAGCGAGCGTAGGGACGGGCTGGAAATGGCAGAAAAGAAAGAAGATTCTAACA AACGAACGAAAAAAAGAGAAAAACCACAAAACTTATCAAACGCTTCTACGAGCTTCGGCT TTATCCAACGAAACTGAGAGCAAATTTGTAAGGGAAGGTAACGTCACAAAAAAAAAGTTC TAAAATGCATGGAATGTAAACAGCAAAAGCAATAACGATACAATTGGTGATTGATTTCGT TTCCATTTTCTCCAACACGGCTCTTCTTGCGAGAGGATTAAAATGACCAACAAGAATCCA ATATCAAATTCTTATTCGTAATACGCTCCAAGAGCTGTTCTGTTAATGGGCGCCCTACTT TTTACTTTTGTTAGTAGTAGCTGCTAAAGCGAAGCACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8115#1      ------------------------------------------------------------
consensus_8115#2      CCGCGGACGCTGGGTACATTTTGAAGCGGGAATCTTACAAGAGTCGCATCCAACAGTGCG 60
consensus_8115#0      ------------------------------------------------------------
consensus_8115#3      ------------------------------------------------------------
                                                                                  

consensus_8115#1      ------------------------------------------------------------
consensus_8115#2      CGCTTTAGACTTGTGGATGAGGGAAAAATAATTCCGCTAGTATATACCTGCATTGAAACG 120
consensus_8115#0      ------------------------------------------GAGATGGCCGTAGCAAAA 18
consensus_8115#3      ------------------------------------------------------------
                                                                                  

consensus_8115#1      ---------------------------------------------------------CCG 3
consensus_8115#2      CGAAAGGTGCGGAATGTGGACGGCTGAAACTTTCTCCCCTCTCTCCCTCTCCCTCTCTCT 180
consensus_8115#0      CAAAGGAAGCAGAGGTAGCAGCAGTAGCAGAACACGGCAAGCCGCCTGTTATTGAGCCTG 78
consensus_8115#3      ------------------------------------------------------------
                                                                                  

consensus_8115#1      CGGACGCGTGGGCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACAC 63
consensus_8115#2      TTCTCTCCCGCCCGCTATTTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACAC 240
consensus_8115#0      GACGTTGTGTCCTGCGTTTCCGGTGCATCGTCAACCCTGTGCTGCAGGGCCCCACACTAT 138
consensus_8115#3      ------------------------------------------------------------
                                                                                  

consensus_8115#1      TAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAA-CA 122
consensus_8115#2      TAATGTTACAAAACGAAGAAGCAGAAGAAGGAAAAAAATATAACAAATAAGAAGAAA-CA 299
consensus_8115#0      TTCGCTTTGGTCGCCAGGGCACAGGGTAAAGCGCGAAATGCTTCATTCGAGCAGAGGGTA 198
consensus_8115#3      ------------------------------------------------------------
                                                                                  

consensus_8115#1      AGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGC 182
consensus_8115#2      AGCTGGCGATATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAACACGGGAGC 359
consensus_8115#0      GAGTTGGAAGTTTCACACGCA---CACACATCT---TTTAAAACGCCGCCAATCGCCAAC 252
consensus_8115#3      --------------------------CCGATCT---TTTAAAACGCCGCCAATCGCCAAC 31
                                                   ****    **   ** * ** *  **  * *

consensus_8115#1      TAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCG-CCAAACATAAGGAAGGGGTGGTGTA 241
consensus_8115#2      TAACGTTTCTTCACTTTTCTGCCTGTAAAGAGCG-CCAAACATAAGGAAGGGGTGGTGTA 418
consensus_8115#0      CG-CGTTTCG-CAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGACGTGCGACGAG 310
consensus_8115#3      CG-CGTTTCG-CAGTAGCTAGATAACAACATTCGGCCAAACCAACTCGACGTGCGACGAG 89
                         ******  ** *     *     **    ** ******  *    * * * *  *  

consensus_8115#1      ACATTAATTACG--ACCA---TTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCA 296
consensus_8115#2      ACATTAATTACG--ACCA---TTTAGGTAATCTTAGATATCTCTTTTGCTCTTAAACTCA 473
consensus_8115#0      GTGGTCGCAGGGGGAGCG---TTAAAGGGAGAGAGGTTCACCCCTCCCCCCGGGAACAGG 367
consensus_8115#3      GTGGTCGCAAGGGGAGCGAGCCGATGTTGCCAAGGGATGGTGGGTGGAAGAGGGGGGCGG 149
                          *      *  * *                  * *      *               

consensus_8115#1      TGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTG 356
consensus_8115#2      TGTGTCTACTACCCGAGGAACGAACGCGTGTAATGAAGTACGAAAGTATGCACGAATTTG 533
consensus_8115#0      TGCTTCCAGTGGGAGGGGAGGGGAGGGGCGAGGGGGATTCGTGGAGCGTTC----GTTCG 423
consensus_8115#3      TGTAGCGGACGG-AGAGGCCGAGGAGGATGAGGTGTGGACGAACCGACGGTATCGAATAG 208
                      **   *        * **       *   *    *          *           * *

consensus_8115#1      CGAAATA-ATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTT-GTTGT 414
consensus_8115#2      CGAAATA-ATCCAAATGCTTTTTTTTTCTCTGGATGATGATGAAGATGTTGTTT-GTTGT 591
consensus_8115#0      TAACATTTAGCCATTTTACCGTGATTGATACGCACAAAGCAGATAGTTCCGTG--GTTAC 481
consensus_8115#3      AGAAAGTTATGCTGAATGCAATATTTTCTATGCAATTTTAAGCGAGCGTAGGGACGGGCT 268
                        * *   *  *         *  **  *  * *       *        *    *    

consensus_8115#1      TCCTTTA-CATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCG 473
consensus_8115#2      TCCTTTA-CATGAAATCATCCGGACGGTGGTAGTATAGGCCAATGGTGTGTGCGTACGCG 650
consensus_8115#0      AAATTTAGCAGCAAGAAGTTTCATTTGCCACATAAAGTGTGTGCCGCGTTAGGGAGCGGC 541
consensus_8115#3      GGAAATGGCAGAAAAGAAAGAAGATTCTAACAAACGAACGAAAAAAAGAGAAAAACCACA 328
                           *  **  **                 *               *        *   

consensus_8115#1      CGCGCAAATGTGTGTGTGTGTGTATGTGGTTTGGTTAACCTGATGCAAGGACGATGCATT 533
consensus_8115#2      CGCGCAAATGTGTGTGTGTGTG-------------------------------------- 672
consensus_8115#0      AGTGCAA-TGCACATGT-TTTGAGGGGGGAAGGGGAGGGTGGGAGTTGGGGGTATACATT 599
consensus_8115#3      AAACTTATCAAACGCTTCTACGAGCTTCGGCTTTATCCAACGAAACTGAGAGCAAATTTG 388
                            *         * *  *                                      

consensus_8115#1      TCACAAGCAA-ACATACATAGAAGAAGCAAAAACAATTACGACTCACT-GTCCGGAGGAT 591
consensus_8115#2      ------------------------------------------------------------
consensus_8115#0      TTGAAGCGGG-AATCTTACAAGAGTCGCATCCAACAGTGCGCGCTTTA-GACTTGTGGAT 657
consensus_8115#3      TAAGGGAAGGTAACGTCACAAAAAAAAAGTTCTAAAATGCATGGAATGTAAACAGCAAAA 448
                                                                                  

consensus_8115#1      GAAAACGAACAGCTACGGTAAAACATTCACACATTCACTGTAACACACGCAAGCACACAC 651
consensus_8115#2      ------------------------------------------------------------
consensus_8115#0      GAGGGAAAAATAATTCCGCTA---GTATATACCTGCATTGAAACGCGAAAGGTGCGGAAT 714
consensus_8115#3      GCAATAACGATACAATTGGTGATTGATTTCGTTTCCATTTTCTCCAACACGGCTCTTCTT 508
                                                                                  

consensus_8115#1      ACACACACCACGGGTAGGGGTGGTATCCTTGA-CCGGGATACGGTAAGGACGACCGGGGC 710
consensus_8115#2      ------------------------------------------------------------
consensus_8115#0      GTGGACGGCTGAAACTTTCTCCCCTCTCTCCC-TCTCACTCTCTCGCTCTTTCTCCCCGC 773
consensus_8115#3      GCGAGAGGATTAAAATGACCAACAAGAATCCAATATCAAATTCTTATTCGTAATACGCTC 568
                                                                                  

consensus_8115#1      GAG----GTGTGCAGGCTAACCGTTATGCCCGGGTTGTGCAGAATGCACGGATGCGTTTG 766
consensus_8115#2      ------------------------------------------------------------
consensus_8115#0      TAA----TTCTCTCTGGCAAACATCCTTTGCCGGCAGTTACGATAACACTAATGTTACAA 829
consensus_8115#3      CAAGAGCTGTTCTGTTAATGGGCGCCCTACTTTTTACTTTTGTTAGTAGTAGC-TGCTAA 627
                                                                                  

consensus_8115#1      AATAGATTAGTAAGATTTCTAAAAGAAAACCCGCCAGGCAGTGCTCCGACGTGTGTTAGA 826
consensus_8115#2      ------------------------------------------------------------
consensus_8115#0      AACGAAGAAGCAGAAGA--AGGAAAAAAATATAACAAATAA-GAAGAAACAAGCTGCCGA 886
consensus_8115#3      AGCGAAGCACT------------------------------------------------- 638
                                                                                  

consensus_8115#1      TAAAGAGAATTGAGACGGGAAGCAAACGACATACATATACACACACATCTACAGACACGC 886
consensus_8115#2      ------------------------------------------------------------
consensus_8115#0      TATGTATAGGCAATGTTTGTATCTAATCTTTGTACCCAGCAAAAAAAAAAAAAAAAAAAA 946
consensus_8115#3      ------------------------------------------------------------
                                                                                  

consensus_8115#1      AATCCATAAATAATCCGATATTTTAAGGTTTAATATTAAT 926
consensus_8115#2      ----------------------------------------
consensus_8115#0      AGGCCACATG------------------------------ 956
consensus_8115#3      ----------------------------------------
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)