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Anopheles gambiae
cluster # 8125 cluster # 8125       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8125#0 length = 1448 sequences # 6  
consensus_8125#1 length = 973 sequences # 1  
consensus_8125#2 length = 818 sequences # 1  
consensus_8125#3 length = 627 sequences # 1  

consensusID : consensus_8125#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1448
fasta sequence
                              [CCGCCTTCAACGAGGTAGGTCGTGTTAGTTGCAAACACTCAACTTCTAGCACTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTGCTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATCGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTAC-GGGCCGGAGCGAATCCTGGCGACGAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTGGGCTTCCTTTCGACGGGCGATGCACACGCTGCCGGTAACTACGGTATGCTCGATCAAGTGTTAGCACTCCGGTGGGTCAATCGACACATCAGCGCCTTCGGTGGTGATCCTCACGCGGTGACACTGTTCGGTGAAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATCATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAAGGTACTAACTGCCAGCATGCCAAACCTAAGAACGTGGTTCGAGCATCCGATCGTTATGTATCGGCCCACGGTGCAGGGAGCTTCCGTACCGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTGGGCGGAAGGGCTTTATATGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGCAATAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGTACCATAAAAACACTCCTGCAGTATGTCAACTCCAATCAAACATCCTGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCTCACTCTACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACCTTTACCGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGTGCAACGCGTGGAC]

[+] EMBL BM599286             [CCGCCTTCAACGAGGTAGGTCGTGTTAGTTGCAAACACTCAACTTCTAGCACTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTGCTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATGGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGGCCGGAGCGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM643081             [                                                      ccGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTGCTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACAT GGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTAC GGGCCGGAGCGAATCCTGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTAGGCTTCCTTTCGACGGGCGATGCACACGCTACCGGTAACTACGGTATGCTTGATCAAGTGTTAGCCCTCCGATGGGTCAATCGACACATCGGCGCCTTCGGTGGTGATCCTCACTCGGTGACACTGTTCGGTGAAAGTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX604297             [                                                                                                        GAAGCTGCTAGTGATATTCGGTGCCATTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGCGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAAAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCTGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGACAACCGATCGTTGGCGATGAAAATTGTCTCTACTTGAATGTGTACCGTCCCAAAGGCAACGGCAGTGCAGCCCCCCTGCCCGTAATGGTGTTCATACA CGGTGGCGGGTACTTCTTTGGATCAGCTGATCCACAGCTGTAC GGGCCGGAGCGAATCCTGGCGACGAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTGGGCTTCCTTTCGACGGGCGATGCACACGCTGCCGGTAACTACGGTATGCTCGATCAAGTGTTAGCACTCCGGTGGGTCAATCGACACATCAGCGCCTTCGGTGGTGATCCTCACGCGGTGACACTGTTCGGTGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX602258             [                                                                                                                          CGGTGCCATTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGCGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAAAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCTGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGACAACCGATCGTTGGCGATGAAAATTGTCTCTACTTGAATGTGTACCGTCCCAAAGGCAACGGCAGTGCAGCCCCCCTGCCCGTAATGGTGTTCATACA CGGTGGCGGGTACTTCTTTGGATCAGCTGATCCACAGCTGTAC GGGCCGGAGCGAATCCTGGCGACGAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTGGGCTTCCTTTCGACGGGCGATGCACACGCTGCCGGTAACTACGGTATGCTCGATCAAGTGTTAGCACTCCGGTGGGTCAATCGACACATCAGCGCCTTCGGTGGTGATCCTCACGCGGTGACACTGTTCGGTGAAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX607581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATCATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAAGGTACTAACTGCCAGCATGCCAAACCTAAGAACGTGGTTCGAGCATCCGATCGTTATGTATCGGCCCACGGTGCAGGGAGCTTCCGTACCGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTGGGCGGAAGGGCTTTATATGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGCAATAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGTACCATAAAAACACTCCTGCAGTATGTCAACTCCAATCAAACATCCTGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCTCACTCTACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACCTTTACCGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGTGCAACGCGTGGAC]
[+] EMBL BM606131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATCATCATGATCGGCATTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAATGTACTAACTGCCAGCATGCCAAACCTAAGAACGTGGTTCGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_8125#0 CCGCCTTCAACGAGGTAGGTCGTGTTAGTTGCAAACACTCAACTTCTAGCACTGAAGTGA GCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTGCTAGTGATA TTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTTTGTACGGAC GATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTC GTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCA ATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGCCTGCAGAAA TCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTG TACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATCGG TGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGAATCCTGGC GACGAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTGGGCTTCCTTTC GACGGGCGATGCACACGCTGCCGGTAACTACGGTATGCTCGATCAAGTGTTAGCACTCCG GTGGGTCAATCGACACATCAGCGCCTTCGGTGGTGATCCTCACGCGGTGACACTGTTCGG TGAAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTT GTTCCAGCGTGCGATCATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACA GGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGA GCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAAGGTACTAACTGC CAGCATGCCAAACCTAAGAACGTGGTTCGAGCATCCGATCGTTATGTATCGGCCCACGGT GCAGGGAGCTTCCGTACCGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTG GGCGGAAGGGCTTTATATGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGC CGTTGTATCGCTTGCAATAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCT CAAGAAGCTGTTAGTACCATAAAAACACTCCTGCAGTATGTCAACTCCAATCAAACATCC TGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCTCACTC TACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACCTTTAC CGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGTGCAAC GCGTGGAC



consensusID : consensus_8125#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 973
fasta sequence
                              [GGCAGAATCGGCACGAGGCGAGGTAGGTCGTGTTAGTTCGCAAACACTCAACTTCTAGCACTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTGCTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGGCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGAATCCTGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTAGGNTTCCTTTCGACGGGGCGAATGCAACACGGCTAACCGGGGTAACTAACGGTATGCCTTGGATCCAAGTTGGTTAGGCCCTTCCGAANTGGGGTTCAATTCGAACACACATTCGGGGCGCCCTTTCCGGTGGTTGANTCCCTCCAACTCCGGGTGGANCAACTCTGGNTTTCACGGGGGGTGAAAAAAAAGGTTTGCCCGGGGGGGCCCGGGGNTGGACTTNTCCCNCGTGTGNGCNAAAGGTTTTGGCCACCCACTTTGAATGTGNGTCTTCTCCCNGGGGATCACCAACGATGCGATGGGGGGCCTTGGTGTTTCCCAAACNCCGGGTTGGCGCGAATCCANTCCACATTAGAGCGCGNGGGAAAGTGTAGCGG]

[+] EMBL BX467824             [GGCAGAATCGGCACGAGGCGAGGTAGGTCGTGTTAGTTCGCAAACACTCAACTTCTAGCACTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTGCTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTTTGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTCGATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAACCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGCCTGCAGAAATCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGGCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGAATCCTGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTAGGNTTCCTTTCGACGGGGCGAATGCAACACGGCTAACCGGGGTAACTAACGGTATGCCTTGGATCCAAGTTGGTTAGGCCCTTCCGAANTGGGGTTCAATTCGAACACACATTCGGGGCGCCCTTTCCGGTGGTTGANTCCCTCCAACTCCGGGTGGANCAACTCTGGNTTTCACGGGGGGTGAAAAAAAAGGTTTGCCCGGGGGGGCCCGGGGNTGGACTTNTCCCNCGTGTGNGCNAAAGGTTTTGGCCACCCACTTTGAATGTGNGTCTTCTCCCNGGGGATCACCAACGATGCGATGGGGGGCCTTGGTGTTTCCCAAACNCCGGGTTGGCGCGAATCCANTCCACATTAGAGCGCGNGGGAAAGTGTAGCGG]


>consensus_8125#1 GGCAGAATCGGCACGAGGCGAGGTAGGTCGTGTTAGTTCGCAAACACTCAACTTCTAGCA CTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTG CTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTT TGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTC GATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAA CCCATCCCAATCGAACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCCTGC CTGCAGAAATCATTCCTGCTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTAC TTGAATGTGTACCGGCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTC ATACATGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGA ATCCTGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTAGGNT TCCTTTCGACGGGGCGAATGCAACACGGCTAACCGGGGTAACTAACGGTATGCCTTGGAT CCAAGTTGGTTAGGCCCTTCCGAANTGGGGTTCAATTCGAACACACATTCGGGGCGCCCT TTCCGGTGGTTGANTCCCTCCAACTCCGGGTGGANCAACTCTGGNTTTCACGGGGGGTGA AAAAAAAGGTTTGCCCGGGGGGGCCCGGGGNTGGACTTNTCCCNCGTGTGNGCNAAAGGT TTTGGCCACCCACTTTGAATGTGNGTCTTCTCCCNGGGGATCACCAACGATGCGATGGGG GGCCTTGGTGTTTCCCAAACNCCGGGTTGGCGCGAATCCANTCCACATTAGAGCGCGNGG GAAAGTGTAGCGG



consensusID : consensus_8125#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 818
fasta sequence
                              [GCAGAATCGCGCACGAGGCCGATCGTTATGTATCGGCCCACGGTGCAGGAGCTTCCGTACCGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTGGGCGGAAGGGCTTTATATGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGCAATAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGTGCCTGTTTTAGCCATAAATGGGACAGATTCTGTTTTGGAGCAACTGAAAGGACGCTACTTTCCGAAGGCGACCAATAATCGATGGATTAAGGAAGACAATGCTAATCAGTTCACAAAGATGATGTCTGATGCATTCATTAAGTATCCTACCATAAAAACACTCCTGCAGTATGTCAACTCCAATCAAACATCCTGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCTCACTCTACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACCTTTACCGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGTGCAACGCGTGGACCGAGTTTCTTGTCAACTTTGCAAGCAATGAAACGCGACCCGATTCTTCAAGATCGTGTGAAGCAAACAAACATTCAGACCGGTTCACCTTTTGGGTAAATTGCACNNAATCATCCCCCAGAAGGGTACGAACCGGTAACTTCGGGCCGGNATTGGTGTCAGTGGGAAATGGATTTGGNCGCGAGATTGGAGAATTCCCG]

[+] EMBL BX467410             [GCAGAATCGCGCACGAGGCCGATCGTTATGTATCGGCCCACGGTGCAGGAGCTTCCGTACCGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTGGGCGGAAGGGCTTTATATGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGCAATAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGTGCCTGTTTTAGCCATAAATGGGACAGATTCTGTTTTGGAGCAACTGAAAGGACGCTACTTTCCGAAGGCGACCAATAATCGATGGATTAAGGAAGACAATGCTAATCAGTTCACAAAGATGATGTCTGATGCATTCATTAAGTATCCTACCATAAAAACACTCCTGCAGTATGTCAACTCCAATCAAACATCCTGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCTCACTCTACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACCTTTACCGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGTGCAACGCGTGGACCGAGTTTCTTGTCAACTTTGCAAGCAATGAAACGCGACCCGATTCTTCAAGATCGTGTGAAGCAAACAAACATTCAGACCGGTTCACCTTTTGGGTAAATTGCACNNAATCATCCCCCAGAAGGGTACGAACCGGTAACTTCGGGCCGGNATTGGTGTCAGTGGGAAATGGATTTGGNCGCGAGATTGGAGAATTCCCG]


>consensus_8125#2 GCAGAATCGCGCACGAGGCCGATCGTTATGTATCGGCCCACGGTGCAGGAGCTTCCGTAC CGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTGGGCGGAAGGGCTTTATA TGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGCAA TAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGTGC CTGTTTTAGCCATAAATGGGACAGATTCTGTTTTGGAGCAACTGAAAGGACGCTACTTTC CGAAGGCGACCAATAATCGATGGATTAAGGAAGACAATGCTAATCAGTTCACAAAGATGA TGTCTGATGCATTCATTAAGTATCCTACCATAAAAACACTCCTGCAGTATGTCAACTCCA ATCAAACATCCTGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGT TCTCCTCACTCTACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGC TCTACCTTTACCGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGG AAATGTGCAACGCGTGGACCGAGTTTCTTGTCAACTTTGCAAGCAATGAAACGCGACCCG ATTCTTCAAGATCGTGTGAAGCAAACAAACATTCAGACCGGTTCACCTTTTGGGTAAATT GCACNNAATCATCCCCCAGAAGGGTACGAACCGGTAACTTCGGGCCGGNATTGGTGTCAG TGGGAAATGGATTTGGNCGCGAGATTGGAGAATTCCCG



consensusID : consensus_8125#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence
                              [CCGCGGACGCGTGGGTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGAATCCTGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTAGGCTTCCTTTCGACGGGCGATGCACACGCTACCGGTAACTACGGTATGCTTGATCAAGTGTTAGCCCTCCGATGGGTCAATCGACACATCGGCGCCTTCGGTGGTGATCCTCACTCGGTGACACTGTTCGGTGAAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATCATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAAGGTACTAACTGCCAGCATGCCAAACCTAAGAACGT]

[+] EMBL BM645153             [CCGCGGACGCGTGGGTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATACATGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGAATCCTGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTAGGCTTCCTTTCGACGGGCGATGCACACGCTACCGGTAACTACGGTATGCTTGATCAAGTGTTAGCCCTCCGATGGGTCAATCGACACATCGGCGCCTTCGGTGGTGATCCTCACTCGGTGACACTGTTCGGTGAAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATCATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAAGGTACTAACTGCCAGCATGCCAAACCTAAGAACGT]


>consensus_8125#3 CCGCGGACGCGTGGGTGCCCGGGCAACCGATCGTTGGCGATGAGAATTGTCTCTACTTGA ATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGTCTCCCTGCCCGTAATGGTGTTCATAC ATGGTGGTGGATATTTCTTCGGTTCGGCCGATCCACAGCTGTACGGGCCGGAGCGAATCC TGGCCACAAAACAAGTGATCCTCGTCACACTCCAGTATCGTCTCGGTGTGTTAGGCTTCC TTTCGACGGGCGATGCACACGCTACCGGTAACTACGGTATGCTTGATCAAGTGTTAGCCC TCCGATGGGTCAATCGACACATCGGCGCCTTCGGTGGTGATCCTCACTCGGTGACACTGT TCGGTGAAAGTGCGGGCGGTGCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGG GCTTGTTCCAGCGTGCGATCATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGA TACAGGATCCGCTGGCGTTGGCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGG ATGAGCTAACGACGGCCGAGCTGGTAGATGTGCTGCAGTATCTCGATGCAAAGGTACTAA CTGCCAGCATGCCAAACCTAAGAACGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8125#1      GGCAGAATCGGCACGAGGCGAGGTAGGTCGTGTTAGTTCGCAAACACTCAACTTCTAGCA 60
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      --------CCGCCTTCAACGAGGTAGGTCGTGTTAGTT-GCAAACACTCAACTTCTAGCA 51
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      CTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTG 120
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      CTGAAGTGAGCTTGGTGGTGATGCCAGTTTAGAATAAGGTATAGTGTTGTAATGAAGCTG 111
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      CTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTT 180
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      CTAGTGATATTCGGTGCCGTTTTGGTCACGGTTGGTGGACAGTTAAAGCATCCGCGTGTT 171
consensus_8125#2      -------------------------------------------------GCAGAATCGCG 11
                                                                                  

consensus_8125#1      TGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTC 240
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      TGTACGGACGATGGCTGTCTGCTGGGAACATCGATGACGGATACGAAGAACCTAAGGTTC 231
consensus_8125#2      CACGAGGCCGATCGTTATGTATCGG--CCCACGGTGCAGGAGCTTCCGTACCGAGCGAGG 69
                                                                                  

consensus_8125#1      GATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAA 300
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      GATGCATTCGTAGGCATTCCCTTTGCAGAGCCACCGGTTGGAAAGCTTCGCTTTAAGAAA 291
consensus_8125#2      AACGCTTCCTGCCGGACGATCCTAGGA-AGCTGTGGGCGGAAGGGCTTTATATGGACATT 128
                                                                                  

consensus_8125#1      CCCATCCCAATCGA---ACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCC 357
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      CCCATCCCAATCGA---ACCTTGGACCGAAGATTACAATGCAACCGAAAGCAAACCGGCC 348
consensus_8125#2      CCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGCAATAGTGCAC 188
                                                                                  

consensus_8125#1      TGCCTGCAGAAATCATTCCTGCTGCCCGGG-----CAACCGATCGTTGGCGATGAGAATT 412
consensus_8125#3      ---CCGCGGACGCG----TGGGTGCCCGGG-----CAACCGATCGTTGGCGATGAGAATT 48
consensus_8125#0      TGCCTGCAGAAATCATTCCTGCTGCCCGGG-----CAACCGATCGTTGGCGATGAGAATT 403
consensus_8125#2      AACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGTGCCTGTTTTA 248
                              **          * *    * *     ***      *** * *       * 

consensus_8125#1      GTCTCTACTTGAATGTGTACCGGCCCAAAGGCAACGGCAGTGCAGT-CTCCCTGCCCGTA 471
consensus_8125#3      GTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGT-CTCCCTGCCCGTA 107
consensus_8125#0      GTCTCTACTTGAATGTGTACCGCCCCAAAGGCAACGGCAGTGCAGT-CTCCCTGCCCGTA 462
consensus_8125#2      GCCATAAATGGGACAGATTCTGTTTTGGAGCAACTGAAAGGACGCTACTTTCCGAAGGCG 308
                      * *   * * * *    * * *      **  *  *  **  *  * **  * *   *  

consensus_8125#1      AT-GGTGTTC-ATACAT-GGTGGTGGATATTTCT--TCGGTTCGGCCGATCCACAGCTGT 526
consensus_8125#3      AT-GGTGTTC-ATACAT-GGTGGTGGATATTTCT--TCGGTTCGGCCGATCCACAGCTGT 162
consensus_8125#0      AT-GGTGTTC-ATACATCGGTGGTGGATATTTCT--TCGGTTCGGCCGATCCACAGCTGT 518
consensus_8125#2      ACCAATAATCGATGGAT-TAAGGAAGACAATGCTAATCAGTTCACAAAGATGATGTCTGA 367
                      *    *  ** **  **    **  ** * * **  ** ****         *   *** 

consensus_8125#1      ACGGGCCGGAGCGAATCCTGGCCACAAAACAAG--TGATCCTCGTCACACTCCAGT--AT 582
consensus_8125#3      ACGGGCCGGAGCGAATCCTGGCCACAAAACAAG--TGATCCTCGTCACACTCCAGT--AT 218
consensus_8125#0      ACGGGCCGGAGCGAATCCTGGCGACGAAACAAG--TGATCCTCGTCACACTCCAGT--AT 574
consensus_8125#2      TGCATTCATTAAGTATCCTACCATAAAAACACTCCTGCAGTATGTCA-ACTCCAATCAAA 426
                            *     * *****  *    *****    **      **** ****** *  * 

consensus_8125#1      CGTCTCGGTGTGT-AGGNT--TCCTTTCGACGGGGCGAATGCAACACGGCTAACCGGGGT 639
consensus_8125#3      CGTCTCGGTGTGTTAGGCT--TCCTTTCGACGGGC--GATGCA-CACG-CTACC---GGT 269
consensus_8125#0      CGTCTCGGTGTGTTGGGCT--TCCTTTCGACGGGC--GATGCA-CACG-CTGCC---GGT 625
consensus_8125#2      CATCCTGCCGAGACACGACGCTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCT 486
                      * **  *  * *    *    **  ****   *       *   *    **        *

consensus_8125#1      AACTAACGGTATGCCTTGGATCCAAGTTGGTTAGGCCCTTCCGAANTGGGGTTCAATTCG 699
consensus_8125#3      AACTA-CGGTATGCTT--GATC-AAGT--GTTAG--CCCTCCGATGGGTCAATCGACACA 321
consensus_8125#0      AACTA-CGGTATGCTC--GATC-AAGT--GTTAG--CACTCCGGTGGGTCAATCGACACA 677
consensus_8125#2      CACTCTACATACAGTCGAACGCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACC 546
                       ***     **          * *     *           *     *     *    * 

consensus_8125#1      AACACACATTCGGGGCGCCCTTTCCGGTGGTTGANTCCCTCCAACTCCGGGTGGANCAAC 759
consensus_8125#3      TCGGCGCCTTCGGTG-GTGATCCTCACTCGGTGACACTGTTCGGTGAAAGTGCGGGCGGT 380
consensus_8125#0      TCAGCGCCTTCGGTG-GTGATCCTCACGCGGTGACACTGTTCGGTGAAAGTGCGGGCGGT 736
consensus_8125#2      TTTACCGCATGATCGATCTCTTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGT 606
                          *    *    *     *   *           *                *      

consensus_8125#1      TCTGGNTTTCA-CGGGGGGTGAAAAAAAAGGTTTGCCCGGGGGGGCCCGGGGNTGGACTT 818
consensus_8125#3      GCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATC 440
consensus_8125#0      GCTTCCGTGCAGCTGCACATGATGTCTCCGCTCAGTGTGGGCTTGTTCCAGCGTGCGATC 796
consensus_8125#2      GCAACGCGTGGACCGAGTTTCTTGTCAA--CTTTGCAAGCAATGAAACGCGACCCGATTC 664
                       *          * *    *           *  *   *        *  *       * 

consensus_8125#1      NTCCCNCGTG----TGNGCNAAAGGTTTTGG--CCACCCACTTTGAATGTGN-GTCTTCT 871
consensus_8125#3      ATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTG 500
consensus_8125#0      ATCATGAGCGGCAGTGCGCTAGCCGTGTGGAGTCTACCGATACAGGATCCGCTGGCGTTG 856
consensus_8125#2      TTCAAGATCG----TGTGAAGCAAACAAACATTCAGACCGGTTCACCTTTTGGGTAAATT 720
                       **      *    ** *               *   *         *     *      

consensus_8125#1      CCCNGGGGATCACCAACGATGCGATGGGGGGCCTTGGTGTTTCC-CAAACNCCGGGTTGG 930
consensus_8125#3      GCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAG 560
consensus_8125#0      GCACGCAAGCAAGCAAAGCTGGTTGGTGTGTCCGAGGCGGATGAGCTAACGACGGCCGAG 916
consensus_8125#2      GCACNNAATCATCCCCCAGAAGGGTACGAACCGGTAACTTCGGGCCGGNATTGGTGTCAG 780
                       *           *             *   *             *       *     *

consensus_8125#1      CGCGAATCCANTCCACATTAGAGCGCGNGGGAAAGTG-TAGCGG---------------- 973
consensus_8125#3      CTGGTAGATGTGCTGCAGTATCTCG-ATGCAAAGGTACTAACTGCCAGCATGCCAAACCT 619
consensus_8125#0      CTGGTAGATGTGCTGCAGTATCTCG-ATGCAAAGGTACTAACTGCCAGCATGCCAAACCT 975
consensus_8125#2      TGGGAAATGGATTTG--GNCGCGAGATTGGAGAATTCCCG-------------------- 818
                         * *                  *   *   *  *                        

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      AAGAACGT---------------------------------------------------- 627
consensus_8125#0      AAGAACGTGGTTCGAGCATCCGATCGTTATGTATCGGCCCACGGTGCAGGGAGCTTCCGT 1035
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      ACCGAGCGAGGAACGCTTCCTGCCGGACGATCCTAGGAAGCTGTGGGCGGAAGGGCTTTA 1095
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      TATGGACATTCCGATCATGATCGGTACAGTACCGAACGAAGGTGCCGTTGTATCGCTTGC 1155
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      AATAGTGCACAACGAAACGATTCTAGAACAGTTCAATGAGAATCTCAAGAAGCTGTTAGT 1215
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      ACCATAAAAACACTCCTGCAGTATGTCAACTCCAATCAAACATCCTGCCGAGACACGACG 1275
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      CTCTATTCGTTTGAGTTTGAGGGCCGTCACTCGTTCTCCTCACTCTACATACAGTCGAAC 1335
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      ------------------------------------------------------------
consensus_8125#3      ------------------------------------------------------------
consensus_8125#0      GCAAGCCATGGCGTATGCCATCAGGATGAGCTGCTCTACCTTTACCGCATGATCGATCTC 1395
consensus_8125#2      ------------------------------------------------------------
                                                                                  

consensus_8125#1      -----------------------------------------------------
consensus_8125#3      -----------------------------------------------------
consensus_8125#0      TTCCCAGACTTCCCGCCCGACTCGCCCGAAACGGAAATGTGCAACGCGTGGAC 1448
consensus_8125#2      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)