cluster # 8126

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Anopheles gambiae
cluster # 8126 cluster # 8126 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8126#0 length = 1319 sequences # 6

consensus_8126#1 length = 585 sequences # 2
consensus_8126#2 length = 497 sequences # 1

consensusID : consensus_8126#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1319
fasta sequence

                              [GGCCAGAATTCGCGCACGAGTGACGTTCTCCCTAGTGGGCTGCTATTTTTTTTATCAACAACCGGTTGTACTACTGATGCACTTTGATCTCTCTCAGTCGATTAGCGCCCTCCACTCCATTCAAACGTGTTTCATAACAAACGCCACCTCGAGAGAGCTCTAATTCCATCGCTACGATCACTGGGATGGCGGGAGGAATTCTAGCTAAGGCATTTGCGAGACTTCGGAAGAAGCCACTCGCACGGCGCTGATCGTTAACGAGGTCAATCAGTCTCGCTGTGTACTTCGAAGACGGTGAATCGGGTAACGCGCGTACAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTGTGTCACTTGTTTGCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCACCCAAAGGGATGACACACACGTGGAATCCAA-CTC-ATTAGGGTTCTAATAGGCGG-AAATAGTTACACACTGATCGCTGCTATTTCGGGCACGTGTTAGCGTTAAATAGTGCGATACAGTCACATAATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGAACTCAATCGACACATTGCTACGACCTGTCTAC-CCTTTTAATTTGCTTTGCTTTCTATTCCCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAAGCAG-A-TCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCC-CCAAAAAC]

[+] EMBL BX468014             [GGCCAGAATTCGCGCACGAGTGACGTTCTCCCTAGTGGGCTGCTATTTTTTTTATCAACAACCGGTTGTACTACTGATGCACTTTGATCTCTCTCAGTCGATTAGCGCCCTCCACTCCATTCAAACGTGTTTCATAACAAACGCCACCTCGAGAGAGCTCTAATTCCATCGCTACGATCACTGGGATGGCGGGAGGAATTCTAGCTAAGGCATTTGCGAGACTTCGGAAGAAGCCACTCGCACGGCGCTGATCGTTAACGAGGTCAATCAGTCTCGCTGTGTACTTCGAAGACGGTGAATCGGCTAACGCGCGTACAGTTAAAATACACCGCAACCTAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08F5Y             [                                                                                                                                                                                                                                                                               TCTCGAAGTGTACTTCGAAGACGGTGAATCGGGTAACGCGCGTACAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTGTGTCACTTGTTTGCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCACCCAAAGGGATGACACACACGTGGAATCCAA CTC ATTAGGGTTCTAATAGGCGG AAATAGTTACACACTGATCGCTGCTATTTCGGGCACGTGTTAGCGTTAAATTTTGCGATACAGTCACATAATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGAACTCAATCGACACATTGCTACGACCTGTCTAC CCTTTTAATTTGCTTTGCTTTCTATTCCCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAA CAG ACTCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAACAAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACTTTACATGACATTATTGGT                                 ]
[+] EMBL CNS08MKF             [                                                                                                                                                                                                                                                                                CTCGCTGTGTACTTCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTTTTTTGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTGTGTCACTTGTTTGCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCACCCAAAGGGATGACACACACGTGGAATCCAA CTC ATTAGGGTTCTAATAGGCGG AAATAGTTACACACTGATCGCTGCTATTTCGGGCACGTGTTGGCGTTAAATAGTGCGATACAGTCACATAATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGAACTCAATCGACACATTGCTACGACCTGTCTAC CCTTTTAATTTGCTTTGCTTTCTATTCCCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAA CAGAA TCTACAACGACAGTGGGTTTGCCGCCTGGAAAGGATGGGTTAACCGCTG                                                                                                                  ]
[-] EMBL CNS08F5Z             [                                                                                                                                                                                                                                                                                                                               TAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCCTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCAAACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGAAAAAACCAACTATGGTATCTTTCAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTTTGTAACTTGTTTGCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCACCCAAAGGGATTAAACACACGTGGAATCCAA CTC ATTAGGGTTCTAATAGGCGG AAATAGTTACACACTGATCGCTGCTATTTCGGGCACGTGTTAGCGTTAAATAGTGCGATACAGTCACATTATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGAACTCAATCGACACATTGCTACGACCTGTCTAC CCTTTTAATTTGCTTTGCTTTCTATTCCCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGTTCTCACGGACGATATCGAGTGTGCGAAGCAG A TCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATTAAACACACTTTACATGACATTATTGGTAATAAAACTATTT ATTTCATCCCTCCA     ]
[-] EMBL CNS08MKG             [                                                                                                                                                                                                                                                                                                                                                                                 GATCCGCCTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCAAACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTTTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTGTGTCACTTGTTTGCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCACCCAAAGGGATTAAACACACGTGGAATCCAA CTC ATTAGGGTTCTAATAGGCGG AAATAGTTACACACTGATCGCTGCTATTTCGGGCACGTGTTGGCGTTAAATAGTGCGATACAGTCACATTATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGGACTCAATCGACACATTGCTACGACCTGTCTACAAAATTTAATTTGCTTTGCTTTCTATTCCCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAAGCAG A TCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCC CCAAAAAC]
[-] EMBL CNS08Z78             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAATCCAACCTCAATTAGGGTTCTAATAGGCGGAAAATAGTTACACACTGATCGCTGCTATTTCGGGCACGTGTTAGCGTTAAATAGTGCGATACAGTCACATAATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGAACTCAATCGACACATTGCTACGACCTGTCTAC CCTTTTAATTTGCTTTGCTTTCTATTCCCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGTTCTCACGGACGATATCGAGTGTGCGAAGCAG A TCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAAGACACTGCCCGTTCTGTCGTCCTGCTGGAACTAGGAACTTCTATTACACACACTTTACATGACATTATTGGTAATAAAACTATTTGA TTAATCCCACCAAAA  ]




>consensus_8126#0
GGCCAGAATTCGCGCACGAGTGACGTTCTCCCTAGTGGGCTGCTATTTTTTTTATCAACA
ACCGGTTGTACTACTGATGCACTTTGATCTCTCTCAGTCGATTAGCGCCCTCCACTCCAT
TCAAACGTGTTTCATAACAAACGCCACCTCGAGAGAGCTCTAATTCCATCGCTACGATCA
CTGGGATGGCGGGAGGAATTCTAGCTAAGGCATTTGCGAGACTTCGGAAGAAGCCACTCG
CACGGCGCTGATCGTTAACGAGGTCAATCAGTCTCGCTGTGTACTTCGAAGACGGTGAAT
CGGGTAACGCGCGTACAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTC
ACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATC
ACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGA
AGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAG
AAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGC
GGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTT
CAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTGTGTCACTTGTTT
GCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAA
GTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCACCCA
AAGGGATGACACACACGTGGAATCCAACTCATTAGGGTTCTAATAGGCGGAAATAGTTAC
ACACTGATCGCTGCTATTTCGGGCACGTGTTAGCGTTAAATAGTGCGATACAGTCACATA
ATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCGAAC
TCAATCGACACATTGCTACGACCTGTCTACCCTTTTAATTTGCTTTGCTTTCTATTCCCT
TCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGATCTCACGGACGATAT
CGAGTGTGCGAAGCAGATCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAA
CCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATA
ACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCCCAAAAAC

consensusID : consensus_8126#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 585
fasta sequence

                              [CCGCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGGGTCTGTCTGGTAATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAAGCAGATCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCACC]

[+] EMBL BM586034             [CCGCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGGGTCTGTCTGGTAATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAAGCAGATCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCACC]
[+] EMBL BM582510             [                                                                                                                                                                                                                                                                                                                                                                                acAAGTGCGAGGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAAGCAGATCTACTACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAAGCAAAACACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCACC]




>consensus_8126#1
CCGCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCAT
GATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAAT
TTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAG
AACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGGGTCTGTCTGGT
AATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAA
CTATGGTATCTTTCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCA
CTGCGACAAGAAGTGCGAGGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGC
GAAGCAGATCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGTTAACCGCTGCAA
GCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCTATAACACACACT
TTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCACC

consensusID : consensus_8126#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence

                              [CTGCGCAGTCTCGTTGTGTACTTCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAAC]

[+] EMBL CNS08Z77             [CTGCGCAGTCTCGTTGTGTACTTCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTACCATCGGTAGCTCCGAAC]




>consensus_8126#2
CTGCGCAGTCTCGTTGTGTACTTCGAAGACGGTGAATCGGGTAACGCGCGTGCAGTTAAA
ATACACCGCAACCTAATCATGATGCGTGGAATACGTCACAACTTCAGATCAGCGTCTGCT
ATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATCACACTGGCGAGGGAAAGGTGTAT
GAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGAAGATCTCCTCGCGGACGCTGATA
TCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAGAAGTCACTAACTAAAGGACTATC
TTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGCGGTGCCGACACCAGCAAGGTGAC
CAAACTCCCAAATGATTCCGCCAACTATGGTATCTTTCAGATCAATAGCAAAACCTGGTG
CCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAAGTGCGAGGGTGAGTGTTACGCTAC
CATCGGTAGCTCCGAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8126#0      GGCCAGAATTCGCGCACGAGTGACGTTCTCCCTAGTGGGCTGCTATTTTTTTTATCAACA 60
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      ACCGGTTGTACTACTGATGCACTTTGATCTCTCTCAGTCGATTAGCGCCCTCCACTCCAT 120
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      TCAAACGTGTTTCATAACAAACGCCACCTCGAGAGAGCTCTAATTCCATCGCTACGATCA 180
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      CTGGGATGGCGGGAGGAATTCTAGCTAAGGCATTTGCGAGACTTCGGAAGAAGCCACTCG 240
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      CACGGCGCTGATCGTTAACGAGGTCAATCAGTCTCGCTGTGTACTTCGAAGACGGTGAAT 300
consensus_8126#2      -----------------------CTGCGCAGTCTCGTTGTGTACTTCGAAGACGGTGAAT 37
consensus_8126#1      -------------------------------------------CCGCGAAGACGGTGAAT 17
                                                                 *  **************

consensus_8126#0      CGGGTAACGCGCGTACAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTC 360
consensus_8126#2      CGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTC 97
consensus_8126#1      CGGGTAACGCGCGTGCAGTTAAAATACACCGCAACCTAATCATGATGCGTGGAATACGTC 77
                      ************** *********************************************

consensus_8126#0      ACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATC 420
consensus_8126#2      ACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATC 157
consensus_8126#1      ACAACTTCAGATCAGCGTCTGCTATCAGTTTTGTGGTGCTAATTTTGTTTACACTCTATC 137
                      ************************************************************

consensus_8126#0      ACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGA 480
consensus_8126#2      ACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGA 217
consensus_8126#1      ACACTGGCGAGGGAAAGGTGTATGAAAAGTGTTCGCTTGCTAGAACGTTTGATCGACAGA 197
                      ************************************************************

consensus_8126#0      AGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAG 540
consensus_8126#2      AGATCTCCTCGCGGACGCTGATATCCAATTGTGAGGCCTGAATTCCACTGTGGAGTGAAG 277
consensus_8126#1      AGATCTCCTCGCGGACGCTGATATCCAATTG----------------------------- 228
                      *******************************                             

consensus_8126#0      AAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGC 600
consensus_8126#2      AAGTCACTAACTAAAGGACTATCTTTCCGTACAGGGGTCTGTCTGGTGATGGCCGAAAGC 337
consensus_8126#1      -----------------------------------GGTCTGTCTGGTAATGGCCGAAAGC 253
                                                         ************ ************

consensus_8126#0      GGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTT 660
consensus_8126#2      GGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTT 397
consensus_8126#1      GGTGCCGACACCAGCAAGGTGACCAAACTCCCAAATGATTCCGCCAACTATGGTATCTTT 313
                      ************************************************************

consensus_8126#0      CAGGTAGGCCTGTTTAAGAAAACTTCCAAAAGCAGATGTTGTATGTTGTGTCACTTGTTT 720
consensus_8126#2      CAG--------------------------------------------------------- 400
consensus_8126#1      CAG--------------------------------------------------------- 316
                      ***                                                         

consensus_8126#0      GCAGATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAA 780
consensus_8126#2      ----ATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAA 456
consensus_8126#1      ----ATCAATAGCAAAACCTGGTGCCGGGAGGGTCGTAAGGGAGGCCACTGCGACAAGAA 372
                          ********************************************************

consensus_8126#0      GTGCGAGGG---TGAGTGTTACGCTACCATCGGTAGCTCCGAACGCGTTTAATAAATCAC 837
consensus_8126#2      GTGCGAGGG---TGAGTGTTACGCTACCATCGGTAGCTCCGAAC---------------- 497
consensus_8126#1      GTGCGAGGACTTTCTGAACGACGATCTCACGGACGATATCGAGTGTGCGAAGCAGATC-- 430
                      ********    *  *    *** *  **  *       ***                  

consensus_8126#0      CCAAAGGGATGACACACACGTGGAATCCAACTCATTAGGGTTCTAATAGGCGGAAATAGT 897
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      -TACAACGACAGTGGGTTTGCCGCTTGGAAAGGAT--GGGT--TAACCGCTGCAAGCAAA 485
                                                                                  

consensus_8126#0      TACACACTGATCGCTGCTATTTCGGGCACGTGTTAGCGTTAAATAGTGCGATACAGTCAC 957
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      -AGACACTGCCCGAT-CTGTCGT-----CCTGCTGGAACTAGGAACTTCTATAA---CAC 535
                                                                                  

consensus_8126#0      ATAATTCACGCCATATCATGTGTTATTATCTCTGCAAATTCCGGTGTCGAAAGGTGTTCG 1017
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCACC---------- 585
                                                                                  

consensus_8126#0      AACTCAATCGACACATTGCTACGACCTGTCTACCCTTTTAATTTGCTTTGCTTTCTATTC 1077
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      CCTTCTTTGCTCTGCTACCACTATTTTGCTAGACTTTCTGAACGACGATCTCACGGACGA 1137
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      TATCGAGTGTGCGAAGCAGATCTACAACGACAGTGGGTTTGCCGCTTGGAAAGGATGGGT 1197
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      TAACCGCTGCAAGCAAAAGACACTGCCCGATCTGTCGTCCTGCTGGAACTAGGAACTTCT 1257
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      ATAACACACACTTTACATGACATTATTGGTAATAAAACTATTTGATTTCATCCCCCAAAA 1317
consensus_8126#2      ------------------------------------------------------------
consensus_8126#1      ------------------------------------------------------------
                                                                                  

consensus_8126#0      AC 1319
consensus_8126#2      --
consensus_8126#1      --