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Anopheles gambiae
cluster # 8175 cluster # 8175       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8175#0 length = 1634 sequences # 5  
consensus_8175#1 length = 675 sequences # 1  
consensus_8175#2 length = 648 sequences # 1  
consensus_8175#3 length = 532 sequences # 1  
consensus_8175#4 length = 526 sequences # 1  

consensusID : consensus_8175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1634
fasta sequence
                              [GAATCCCCCGAGGTTATAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAAACAGTACTCGATGTTACTTGGTCTTAGATACGACGAGAAACGCTTATTGTTCATCGTGGTTGTGTGCGCATAATCTGGAAAGCGTAAGCATGTCTACTCCACCGGTCCGTAGAATAACCATCGGTGGCGTTCCATCGAAAATCGTCAGCATCCCAAGGCGCATCTCATTAAGTGCTTCGGGAACAAGTGCGGTCGCTATCGATAACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACCTTATGTTTGCCGTACGTGAAGAAGTTGAAGTACTAAAAGAAAGGATATCTGAGCTGATGGACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAACGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAGCTGCCGCAGCAGTGGCACAGCAGCAACTCACGGCGATGCCAAACATCAATGTTGGCCCCACCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTCCGTTTCCTAAGCTTAATGTTCCAAACCAGCCGTTAGACGTACACTTGACATAAAGACTATTATAATTACTAGTACTACTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTGTGTTGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGACACTCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTG-TTGCGGAACGGCACTACAATAAAATGGTTGAAAATTTGGAGCGTAAGCAGCAAGGGAACACAACCGCAGGATGGGATGTATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTAGGAAATCAGGAATTCCATTACGCGTGTAGCCAATTCGATAGTGAACGACAGCGTGTGAAGTACGCAAACCACCCTAAAGCTAGAAGGAATTCTCGAAGGAAGCAACACATACACATGCTGGTGGTGGTCATCGCAAACGTAAAGATGAATCACGAACAGTANAGGAAAATAAGATAATGTTGCCAATGGTAGTTGAAACGTATCTAATCATTCTGAAACCCGTATGAACCGTAGTATCACTTCGTANAAGTAGTCGGTAAGGTAATGTGTATTGGTTTGAAAAGCCGGTACCATTGACCACCTTAACAAACAGGCATCGAGTTAAACCGGCGATGCTACTG]

[+] EMBL AL932304             [GAATCCCCCGAGGTTATAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAAACAGTACTCGATGTTACTTGGTCTTAGATACGACGAGAAACGCTTATTGTTCATCGTGGTTGTGTGCGCATAATCTGGAAAGCGTAAGCATGTCTACTCCACCGGTCCGTAGAATAACCATCGGTGGCGTTCCATCGAAAATCGTCAGCATCCCAAGGCGCATCTCATTAAGTGCTTCGGGAACAAGTGCGGTCGCTATCGATAACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACCTTATGTTTGCCGTACGTGAAGAAGTTGAAGTACTAAAAGAAAGGATATCTGAGCTGATGGACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM620696             [                                                                                                                                                                                                                                                                                             ccgGAATAACCATCGGTGGCGTTCCATCGAAAATCGTCAGCATCCCAAGGCGCATCTCATTAAGTGCTTCGGGAACAAGTGCGGTCGCTATCGATAACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACCTTATGTTTGCTGTACGTGAAGAAGTTGAAGTCCTAAAAGAAAGGATATCTGAGCTGATGGACCGTATCAACCAACTCGAGTACGAAAACAACATTCTAAAAGCGAACGCATCACAGGAAACGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAGCTGCCGCAGCAGTGGCACAGCAGCAACTCACGGCGATGCCAAACATCAATGTTGGCCCCACCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTCCGTTTCCTAAGCTTAATGTTCCAAACCAGCCGTTAGACGTACACTTGACATAAAGACTATTATAATTACTAGTACTACTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTATGTAGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX629009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTGTGTTGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGACACTCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTG TTGCGGAACGGCACTACAATAAAATGGTTGAAAATTTGGAGCGTAAGCAGCAAGGGAACACAACCGCAGGATGGGATGTATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTAGGAAATCANGAATTCCATTACGCGTGTAGCCAATTCGATAGTGAACGACAGCGTGTGAAGTACGCAAACCACCCTAAAGCTAGAAGGAATTCTCGAAGGAAGCAACACATACACATGCTGGTGGTGGTCATCGCAAACGTANAGATGAATCACGAACAGTANAGGAAAATAAGATAATGTTGCCAATGGTAGTTGAAACGTATCTAATCATTCTGAAACCCGTATGAACCGTAGTATCACTTCGTANAAGTAGTCGGTAAGGTAATGTGTATTGGTTTGAAAAGCCGGTA                                                   ]
[+] EMBL BX623734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTGTGTTGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGACACTCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTG TTGCGGAACGGCACTACAATAAAATGGTTGAAAATTTGGAGCGTAAGCAGCAAGGGAACACAACCGCAGGATGGGATGTATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTAGGAAATCAGGAATTCCATTACGCGTGTAGCCAATTCGATAGTGAACGACAGCGTGTGAAGTACGCAAACCACCCTAAAGCTAGAAGGAATTCTCGAAGGAAGCAACACATACACATGCTGGTGGTGGTCATCGCAAACGTAAAGATGAATCACGAACAGTAAAGGAAAATAAGATAATGTTGCCAATGGTAGTTGAAACGTATCTAATCATTCTGAAACCCGTATGAACCGTAGTATCACTTCGTAGAAGTAGTCGGTAAGGTAATGTGTATTGGTTTGAAAAGCCGGTACCATTGACCACCTTAACAAACAGGCATCGAGTTAAACCGGCGATGCTACTG]
[+] EMBL BM630832             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGACACTCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTGTTTGCGGAACGGCACTACAATAAAATGGTTGAAATTTTGGAGCGTAAGCAGCAAGGGAACACAACCGCAGGATGGGATGTATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTGGGAAATCAGGAATTCCATTACGCGTGTAGCCAATTCGATAGTGAACGAAAGCGTGTGAAGTACGCAAACCACCCTAAAGCTAGAAGGAATTCTCGAAGGAAGCAACACATACACATGCTGGTGGTGGTCATCGCAAACGTAAAGATGAA                                                                                                                                                                                                ]


>consensus_8175#0 GAATCCCCCGAGGTTATAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGC ATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAATTGTGTGCA ATTGAGTGCCCGCAGCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAAACA GTACTCGATGTTACTTGGTCTTAGATACGACGAGAAACGCTTATTGTTCATCGTGGTTGT GTGCGCATAATCTGGAAAGCGTAAGCATGTCTACTCCACCGGTCCGTAGAATAACCATCG GTGGCGTTCCATCGAAAATCGTCAGCATCCCAAGGCGCATCTCATTAAGTGCTTCGGGAA CAAGTGCGGTCGCTATCGATAACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACC TTATGTTTGCCGTACGTGAAGAAGTTGAAGTACTAAAAGAAAGGATATCTGAGCTGATGG ACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAA CGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAG CTGCCGCAGCAGTGGCACAGCAGCAACTCACGGCGATGCCAAACATCAATGTTGGCCCCA CCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTCCGTTTCCTAAGCTTAAT GTTCCAAACCAGCCGTTAGACGTACACTTGACATAAAGACTATTATAATTACTAGTACTA CTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAA CATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACT AGGACGCCGTTCATCCTGTGTTGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACT GGCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTG TCTCCGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGACACTCATGCTTCTCAACTTCT ATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACA CATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTGTTGCGGAACGGCACTACAATAAAAT GGTTGAAAATTTGGAGCGTAAGCAGCAAGGGAACACAACCGCAGGATGGGATGTATGCTA GAGTCCATTAGGTCCAGAGTAAGCGAGACACTAGGAAATCAGGAATTCCATTACGCGTGT AGCCAATTCGATAGTGAACGACAGCGTGTGAAGTACGCAAACCACCCTAAAGCTAGAAGG AATTCTCGAAGGAAGCAACACATACACATGCTGGTGGTGGTCATCGCAAACGTAAAGATG AATCACGAACAGTANAGGAAAATAAGATAATGTTGCCAATGGTAGTTGAAACGTATCTAA TCATTCTGAAACCCGTATGAACCGTAGTATCACTTCGTANAAGTAGTCGGTAAGGTAATG TGTATTGGTTTGAAAAGCCGGTACCATTGACCACCTTAACAAACAGGCATCGAGTTAAAC CGGCGATGCTACTG



consensusID : consensus_8175#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence
                              [CCGCCCACGCGTCCGACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACCTTATGTTTGCTGTACGTGAAGAAGTTGAAGTCCTAAAAGAAAGGATATCTGAGCTGATGGACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAACGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAGCTGCCGCAGCAGTGGCACAGCAGCAACTCACGGCGATGCCAAACATCAATGTTGGCCCCACCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTCCGTTTCCTAAGCTTAATGTTCCAAACCAGCCGTTAGACGTACACTTGACATAAAGACTATTATAATTACTAGTACTACTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTATGTAGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGAGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGAGGAGGAGTGAATC]

[+] EMBL BM591115             [CCGCCCACGCGTCCGACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACCTTATGTTTGCTGTACGTGAAGAAGTTGAAGTCCTAAAAGAAAGGATATCTGAGCTGATGGACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAACGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAGCTGCCGCAGCAGTGGCACAGCAGCAACTCACGGCGATGCCAAACATCAATGTTGGCCCCACCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTCCGTTTCCTAAGCTTAATGTTCCAAACCAGCCGTTAGACGTACACTTGACATAAAGACTATTATAATTACTAGTACTACTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTATGTAGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGAGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGAGGAGGAGTGAATC]


>consensus_8175#1 CCGCCCACGCGTCCGACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACCTTATGT TTGCTGTACGTGAAGAAGTTGAAGTCCTAAAAGAAAGGATATCTGAGCTGATGGACCGTA TCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAACGCTGG CACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAGCTGCCG CAGCAGTGGCACAGCAGCAACTCACGGCGATGCCAAACATCAATGTTGGCCCCACCAAAG TACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTCCGTTTCCTAAGCTTAATGTTCCA AACCAGCCGTTAGACGTACACTTGACATAAAGACTATTATAATTACTAGTACTACTAACC GAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTC GCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACG CCGTTCATCCTATGTAGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCG CTCTGTGATTGATGACGCGCGCGAGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCC GAGGAGGAGTGAATC



consensusID : consensus_8175#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 648
fasta sequence
                              [CCGCTTCATTCAGACAATTTCCCTGTGCCGATACTGTCGTGTTCTGGCCCTTGGTGTAACGTAAATCGCGCGCGCACTCGCAGTCCAACAATCGTTGGTGCAGTTTTTGGGTGTATAACACCGCGTATTCTCATTGTGACGCATGTCAGTGGAACTAAGTTAGCTCGACGGTGGTGTAAAGCGGACCCTTTCGCTTGCGTGTTTCAGTGATCGTTGTTGTTTATTGATTATTGTGAATAAAAAGGCCTTTTAATCCACCCATCGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGGCAGTGTGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGTTCACGGACACTGCTGCACATGGTAAAGATCAGTTAGTCTTTGTATATCTGCACGGTTGATACTGCAGCTAGAATCGAGTGAATAATACACATCTCGCTGTGCATGATAACACGTGCGTAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAACCAGT]

[+] EMBL BM604633             [CCGCTTCATTCAGACAATTTCCCTGTGCCGATACTGTCGTGTTCTGGCCCTTGGTGTAACGTAAATCGCGCGCGCACTCGCAGTCCAACAATCGTTGGTGCAGTTTTTGGGTGTATAACACCGCGTATTCTCATTGTGACGCATGTCAGTGGAACTAAGTTAGCTCGACGGTGGTGTAAAGCGGACCCTTTCGCTTGCGTGTTTCAGTGATCGTTGTTGTTTATTGATTATTGTGAATAAAAAGGCCTTTTAATCCACCCATCGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGGCAGTGTGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGTTCACGGACACTGCTGCACATGGTAAAGATCAGTTAGTCTTTGTATATCTGCACGGTTGATACTGCAGCTAGAATCGAGTGAATAATACACATCTCGCTGTGCATGATAACACGTGCGTAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAACCAGT]


>consensus_8175#2 CCGCTTCATTCAGACAATTTCCCTGTGCCGATACTGTCGTGTTCTGGCCCTTGGTGTAAC GTAAATCGCGCGCGCACTCGCAGTCCAACAATCGTTGGTGCAGTTTTTGGGTGTATAACA CCGCGTATTCTCATTGTGACGCATGTCAGTGGAACTAAGTTAGCTCGACGGTGGTGTAAA GCGGACCCTTTCGCTTGCGTGTTTCAGTGATCGTTGTTGTTTATTGATTATTGTGAATAA AAAGGCCTTTTAATCCACCCATCGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAG CATCCATCCATCGTGGGCAGTGTGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATG AAGTTCACGGACACTGCTGCACATGGTAAAGATCAGTTAGTCTTTGTATATCTGCACGGT TGATACTGCAGCTAGAATCGAGTGAATAATACACATCTCGCTGTGCATGATAACACGTGC GTAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTG GCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAAATTGTGTGCAATTGAGTGCCCGCA GCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAACCAGT



consensusID : consensus_8175#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 532
fasta sequence
                              [CCGCCCACGCGTCCGCGTTGGTGCAGTTTTTGGGTGTATAACACCGCGTATTTTCATTGTGACGCATGTCAGTGGAACTAAGTTAGCTCGACGGTGGTGTAAAGTGGACCCTTTCGCTTGCGTGTTTCAGTGATCGTTGTTGTTTATTGATTATTGTGAATAAAAAGGCCTTTTAATCCACCCATCGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGGCAGTGTGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGGTCACGGACACTGCTGCACATAGTAAAGATCAGTTAGTCTTTGTATATCTGCACGGTTGATACTGCAGCTAGAATCGAGTGAATAATATACATCTCGCTGTGCATGATAACACGTGCGTAGGTGATAACCGCGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTGACGGTAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAA]

[+] EMBL BM650126             [CCGCCCACGCGTCCGCGTTGGTGCAGTTTTTGGGTGTATAACACCGCGTATTTTCATTGTGACGCATGTCAGTGGAACTAAGTTAGCTCGACGGTGGTGTAAAGTGGACCCTTTCGCTTGCGTGTTTCAGTGATCGTTGTTGTTTATTGATTATTGTGAATAAAAAGGCCTTTTAATCCACCCATCGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGGCAGTGTGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGGTCACGGACACTGCTGCACATAGTAAAGATCAGTTAGTCTTTGTATATCTGCACGGTTGATACTGCAGCTAGAATCGAGTGAATAATATACATCTCGCTGTGCATGATAACACGTGCGTAGGTGATAACCGCGTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTGACGGTAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAA]


>consensus_8175#3 CCGCCCACGCGTCCGCGTTGGTGCAGTTTTTGGGTGTATAACACCGCGTATTTTCATTGT GACGCATGTCAGTGGAACTAAGTTAGCTCGACGGTGGTGTAAAGTGGACCCTTTCGCTTG CGTGTTTCAGTGATCGTTGTTGTTTATTGATTATTGTGAATAAAAAGGCCTTTTAATCCA CCCATCGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGG CAGTGTGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGGTCACGGACACTGC TGCACATAGTAAAGATCAGTTAGTCTTTGTATATCTGCACGGTTGATACTGCAGCTAGAA TCGAGTGAATAATATACATCTCGCTGTGCATGATAACACGTGCGTAGGTGATAACCGCGT GTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTGCGAGAAGACTTA GCCAACTGACGGTAAAAAATTGTGTGCAATTGAGTGCCCGCAGCTCCTCCAA



consensusID : consensus_8175#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 526
fasta sequence
                              [AATCCCCCGAGGTTACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTGTGTTGTTTAGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGATACTCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTGTTTGCGGAACGGCACTACAATAAAATGGTTGAACATCTCTGGAGCGTAAGCAGCAANGGGAACACAACCGCAGGCATGGGCATGTATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTGGGAAATC]

[+] EMBL AL694205             [AATCCCCCGAGGTTACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAGGACGCCGTTCATCCTGTGTTGTTTAGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGTCTCCGGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGATACTCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTGTTTGCGGAACGGCACTACAATAAAATGGTTGAACATCTCTGGAGCGTAAGCAGCAANGGGAACACAACCGCAGGCATGGGCATGTATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTGGGAAATC]


>consensus_8175#4 AATCCCCCGAGGTTACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGCAAACA TTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGCAGACTAG GACGCCGTTCATCCTGTGTTGTTTAGGAATGCTGCCTCCTAGTCCGAGCCCGAGTGACTG GCGCGCTCTGTGATTGATGACGCGCGCGGACAATAGTGTTCCAACTCAGGCACTGATTGT CTCCGGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGATACTCATGCTTCTCAACTTCT ATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTGTTCACA CATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTGTTTGCGGAACGGCACTACAATAAAA TGGTTGAACATCTCTGGAGCGTAAGCAGCAANGGGAACACAACCGCAGGCATGGGCATGT ATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTGGGAAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8175#0      GAATCCCCCGAGGTTATAGGTGATAACCGTGTGTAGGTAGCCATAATTTATGACAAGTGC 60
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      ATTGCTGGCCAAGTGGCCTGCGAGAAGACTTAGCCAACTCACGGTAAAAAATTGTGTGCA 120
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      ATTGAGTGCCCGCAGCTCCTCCAATCACCACCAGCTGCAAGCGACGTACCGGTACAAACA 180
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      GTACTCGATGTTACTTGGTCTTAGATACGACGAGAAACGCTTATTGTTCATCGTGGTTGT 240
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      GTGCGCATAATCTGGAAAGCGTAAGCATGTCTACTCCACCGGTCCGTAGAATAACCATCG 300
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      GTGGCGTTCCATCGAAAATCGTCAGCATCCCAAGGCGCATCTCATTAAGTGCTTCGGGAA 360
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ----------------------CCGCTTCATTCAGACAATTTCCCTGTGCCGATACTGTC 38
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      CAAGTGCGGTCGCTATCGATAACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACC 420
consensus_8175#1      ------CCGCCCACGCGTCCGACAAAATCGAGCAAGCAATGGATCTGGTCAAATCGCACC 54
consensus_8175#4      ---------------------------------------------------AATCCC--C 7
consensus_8175#2      GTGTTCTGGCCCTTGGTGTAACGTAAATCGCGCGCGCACTCGCAGTCCAACAATCGTTGG 98
consensus_8175#3      ---------------------------------CCGCCCACGC-GTCCG-----CGTTGG 21
                                                                            *     

consensus_8175#0      TTATGTTTGCCGTACGTGAAGAAGTTGAAGTACTAAAAGAAAGGATATCTGAGCTGATGG 480
consensus_8175#1      TTATGTTTGCTGTACGTGAAGAAGTTGAAGTCCTAAAAGAAAGGATATCTGAGCTGATGG 114
consensus_8175#4      CGAGGTTACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGACGC--AAACATTTCG 65
consensus_8175#2      TGCAGTTT-TTGGGTGTATAACACCGCGTATTCTCATTGTGACG-CAT---GTCAGTGGA 153
consensus_8175#3      TGCAGTTT-TTGGGTGTATAACACCGCGTATTTTCATTGTGACG-CAT---GTCAGTGGA 76
                          ***            *          *       *  * *         *      

consensus_8175#0      ACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAA 540
consensus_8175#1      ACCGTATCAACCAACTCGAGTACGAAAACAACATTCTCAAAGCGAACGCATCACAGGAAA 174
consensus_8175#4      CGAATATAGAG-GGCCGGTGCTCTAGACCA-----CTCGAAAAAAATGTTGAGCAG---- 115
consensus_8175#2      ACTAAGTTAGCTCGACGGTGGTGTAAAGCGGACCCTTTCGCTTGCGTGTTTCA------- 206
consensus_8175#3      ACTAAGTTAGCTCGACGGTGGTGTAAAGTGGACCCTTTCGCTTGCGTGTTTCA------- 129
                            *          * *    * *         *          *            

consensus_8175#0      CGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAG 600
consensus_8175#1      CGCTGGCACAGCTGACCACTGGAGGTAGTACAGTAGCAGCAGCGGCGGCAGTCGCAGCAG 234
consensus_8175#4      -ACTAGGAC-GCCGTTCATCCTGTGTTGTTTAGGAATGCTGCCTCC--TAGTCCGAGC-- 169
consensus_8175#2      -GTGATCGTTGTTGTTTATTGATTATTGTG-AATAAAAAGGCCTTT--TAATCCACCCAT 262
consensus_8175#3      -GTGATCGTTGTTGTTTATTGATTATTGTG-AATAAAAAGGCCTTT--TAATCCACCCAT 185
                                *  *   *       * **  *  *       *      * **    *  

consensus_8175#0      CTGCCGCAGCAGTGGCACAG-CAGCAACTCACGGCGATG-CCAAACATCAATGTTGGCCC 658
consensus_8175#1      CTGCCGCAGCAGTGGCACAG-CAGCAACTCACGGCGATG-CCAAACATCAATGTTGGCCC 292
consensus_8175#4      ---CCGAGTGACTGGCGCGCTCTGTGATTGATGACGCGC-GCGGACAATAGTGTT---CC 222
consensus_8175#2      CGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGGCAGTG 322
consensus_8175#3      CGCAGACAGCAGCGGCATTGTTTGGTTTTTATGCCCAGCATCCATCCATCGTGGGCAGTG 245
                                *  ***       *    * * * *      *   *     **       

consensus_8175#0      CACCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTC--CGTTTCCTAAGCT 716
consensus_8175#1      CACCAAAGTACCAACCTCCTCGGCAAACCCTGCCAACCCTGGTTC--CGTTTCCTAAGCT 350
consensus_8175#4      AACTCAGGCACTGATTGTCTCCGGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGATAC 282
consensus_8175#2      TGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGTTCA--CGGACACTGCTGC 380
consensus_8175#3      TGCTGTATCGTTTAATTGCAACGCAAATAGCATTGATGAAGGTCA--CGGACACTGCTGC 303
                        *          *    *   *            *    *       *           

consensus_8175#0      TAATGTTCCAAACCAGCCGTTAGACGTACAC-TTGACATAAAGACTATTATAATTACTAG 775
consensus_8175#1      TAATGTTCCAAACCAGCCGTTAGACGTACAC-TTGACATAAAGACTATTATAATTACTAG 409
consensus_8175#4      TCATGCTTCTCAACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCA--CACCAG 340
consensus_8175#2      ACATGGTAAAGATCAGTTAGTCTTTGTATAT--CTGCACGGTTGATACTGCAGCTA--GA 436
consensus_8175#3      ACATAGTAAAGATCAGTTAGTCTTTGTATAT--CTGCACGGTTGATACTGCAGCTA--GA 359
                        **  *    * *      *    **          *       *  *  *   *    

consensus_8175#0      TACTACTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGAC 835
consensus_8175#1      TACTACTAACCGAAGCAAGCAACATCATCACCGAGAGCATCGAGTGCGCGTAGAGAAGAC 469
consensus_8175#4      ATCCACTGATCTTGTTCAC--ACATT-TCCTCGAAAGCAGCAGTTCTGAATATCCGTGTT 397
consensus_8175#2      ATCGAGTGAATAATACACATCTCGCTGTGCATGATAACA-CGTGCGTAGGTGATAACCGT 495
consensus_8175#3      ATCGAGTGAATAATATACATCTCGCTGTGCATGATAACA-CGTGCGTAGGTGATAACCGC 418
                        * * * *             *    *    ** * ** *         *         

consensus_8175#0      GCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGC 895
consensus_8175#1      GCAAACATTTCGCGAATATAGAGGGCCGGTGCTCTAGACCACTCGAAAAAAATGTTGAGC 529
consensus_8175#4      TGCGGAACGGCACTACAATAAAATG-----GTTGAACATCTCTGGAGCG------TAAGC 446
consensus_8175#2      GTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTG-----CGAGA 550
consensus_8175#3      GTGTAGGTAGCCATAATTTATGACAAGTGCATTGCTGGCCAAGTGGCCTG-----CGAGA 473
                                *   *   **            *      *    *            ** 

consensus_8175#0      AGACTAGGACGCCGTTCATCCTGTGTTGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAG 955
consensus_8175#1      AGACTAGGACGCCGTTCATCCTATGTAGTTTGGAATGCTGCCTCCTAGTCCGAGCCCGAG 589
consensus_8175#4      AGCAANGGGAACACAACCGCAGGCATGGGCATGTATGCTAGAGTCCA-TTAGGTCCAGAG 505
consensus_8175#2      AGACTTAGCCAACTCACGGTAAAAAAA---TTGTGTGCAATTGAGTGCCCGCAGCTCCTC 607
consensus_8175#3      AGACTTAGCCAACTGACGGTAAAAAA----TTGTGTGCAATTGAGTGCCCGCAGCTCCTC 529
                      **     *        *               *  ***                *     

consensus_8175#0      TGACTGGCGCGCTCTGTGATTGATGACGCGCGCG-GACAATAGTGTTCCAACTCAGGCAC 1014
consensus_8175#1      TGACTGGCGCGCTCTGTGATTGATGACGCGCGCGAGACAATAGTGTTCCAACTCAGGCAC 649
consensus_8175#4      TAAGCGAGACACTGGGAAATC--------------------------------------- 526
consensus_8175#2      CAATCACCACCAGCTGCAAGCGACGTACCGGTACAACCAGT------------------- 648
consensus_8175#3      CAA--------------------------------------------------------- 532
                        *                                                         

consensus_8175#0      TGATTGTCTCCGGGGAGGAGTGAATCGTGGGTTGATGCTGCTCGACACTCATGCTTCTCA 1074
consensus_8175#1      TGATTGTCTCCGAGGAGGAGTGAATC---------------------------------- 675
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      ACTTCTATTCCAAGTCCCTGTTAGTATTAACGTTTTTGCACACCAGATCCACTGATCTTG 1134
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      TTCACACATTTCCTCGAAAGCAGCAGTTCTGAATATCCGTGTTGCGGAACGGCACTACAA 1194
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      TAAAATGGTTGAAAATTTGGAGCGTAAGCAGCAAGGGAACACAACCGCAGGATGGGATGT 1254
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      ATGCTAGAGTCCATTAGGTCCAGAGTAAGCGAGACACTAGGAAATCAGGAATTCCATTAC 1314
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      GCGTGTAGCCAATTCGATAGTGAACGACAGCGTGTGAAGTACGCAAACCACCCTAAAGCT 1374
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      AGAAGGAATTCTCGAAGGAAGCAACACATACACATGCTGGTGGTGGTCATCGCAAACGTA 1434
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      AAGATGAATCACGAACAGTANAGGAAAATAAGATAATGTTGCCAATGGTAGTTGAAACGT 1494
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      ATCTAATCATTCTGAAACCCGTATGAACCGTAGTATCACTTCGTANAAGTAGTCGGTAAG 1554
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      GTAATGTGTATTGGTTTGAAAAGCCGGTACCATTGACCACCTTAACAAACAGGCATCGAG 1614
consensus_8175#1      ------------------------------------------------------------
consensus_8175#4      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
consensus_8175#3      ------------------------------------------------------------
                                                                                  

consensus_8175#0      TTAAACCGGCGATGCTACTG 1634
consensus_8175#1      --------------------
consensus_8175#4      --------------------
consensus_8175#2      --------------------
consensus_8175#3      --------------------
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)