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Anopheles gambiae
cluster # 8190 cluster # 8190       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8190#0 length = 1768 sequences # 6  
consensus_8190#1 length = 818 sequences # 1  
consensus_8190#2 length = 650 sequences # 1  
consensus_8190#3 length = 627 sequences # 1  

consensusID : consensus_8190#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1768
fasta sequence
                              [GCAGAATCCGCACGGAGNGATTTTTCCTTTCCTTTTGTCGCGACTGCTCACATGTATAGTTGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGAGGGCAGCTTTATCCCGCCGATTGCAGGCTGAAATTGCATGGCAGCTAATCCTATAACCTTCTATGCCACTCACGCACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTACTGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACATGGTGATGGAATGAGTGAGGCGGTAAAGAGAAGGGACCGGTGGTAGCAAAGACAGTGCAAAGGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAAGCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGTCAGATATTTATACCGAGTAAGGAAACTGTGACCGTTGCGCATATCCTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGAGGACGCAGTGAGAAGATTATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAAAATAAAAAGAGCAGAAACAAAAAGGAACACGAGTGTCACACTGTGGACAAAACATGCCGTAGTATATCGCACCCCTTTTTAAAGTAACATCCACAAATTGAAGATTGAACAATCAAGCTCGAGTGAAGTGAAAGACAGCCAGTAGGGCAGTGAGATTTGTCATACCTGTGGTGGTGGGTGTGTGTGTGGCGCGCGCAATCGAAACTAAAACACGTGCGCACCAAACACGTGTTTCGATAGTAAATCATTTTGTATGCCTCTGGTTTTCAGTGCTTGCATAATACAGAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACGGTTTTTGTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTTTTTGTTTTACAAATGAAAGACAGACGCCAACGCATATGATTTCGTGCGATAGTAAACAATTGAACAGGCCATTCGATCATATTATGAAACCCCAATTATGGTGCCAACATTTGCCGAGCAGAAATGGAGGGTTAAGAAAAGCGCGCTCTATAGC-CTGCCATTATTGCATCCTTTGTACATGTGTTTGCTCTGTGTAGGACTATCAGCCCGGCGGGGCAGTGCATTATTGCTTTATAAGGAACGCCCTGTTGCACAGTTGCCTGAACATACATACAAAGAAAAAGTCATACATGCGGAAACAGAATCAAAAGTTAGCCAAAAACACAAACACACTCACACC-TTCTACTACAGTAGACGACAAATGGCGATAGCAGGTTACCGTTTAAGGGAGTTTGCGTTTACCCATTTCCGGTGCACTACACTGTACAGCGCACGAAACAGCAGTTAACCGTTGTGTAGTGAAAGCAATAGAAATCAAGGTTTTGTTTTTCTTCCTCTTCAGGATACCACTACAAAGACAAGATGTAATGTCCGGTATACCTTTACATCAATTACTCGTACACGATTTCAACCGCAAACAGTGCCGTGGCGTGCACTGTGGGGGCTTTTATTTTGACTCCGCTTCTTTTGCTGCCCACTCGGCGATTAAACGTTACTAAGGTCTCGGCGAAGCATAAAATAAAAC-AGGAACGCAACAATTGAGAGCCATGGACAAAGACCAAGGGGAAAAGCGTTAAAGCTGTG]

[+] EMBL BX466090             [GCAGAATCCGCACGGAGNGATTTTTCCTTTCCTTTTGTCGCGACTGCTCACATGTATAGTTGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGAGGGCAGCTTTATCCCGCCGATTGCAGGCTGAAATTGCATGGCAGCTAATCCTATAACCTTCTATGCCACTCACGCACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTACTGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACATGGTGATGGAATGAGTGAGGCGGTAAAGAGAAGGGACCGGTGGTAGCAAAGACAGTGCAAAGGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAAGCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGTCAGATATTTATACCGAGTAAGGAAACTGTGACCGTTGCGCATATCCTAATGGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM633984             [                                                                                                                                                                                                                  CCGCACCGTTAGATTAGGAGTGGAAGGTACTGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACATGGTGATGGAATGAGTGAGGCGGTAAAGTGAAGGGACCGGTGGTAGCAAAGACAGTGTAAAGGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAGGCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGT AGATATTTATACCGAGTAAGGAAACCGTGACCGTTGCGCATATCCTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGAGGACGCAGTGAGAAGATTATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAAAATAAAAAGAGCAGAAACAAAAAGGAACACGAGTGTCACACTGTGGACAAAACATGCCGTAGTATATCGCACCCCTTTTTAAAGTAACATCCACAAATTGAAGATTGAACAATCAAGCTCGAGTGAAGTGAAAGACAGCCAGTAGGGCAGTGAGATTTGTCATACCTGTGGTGGTGGGTGTGTGTGTGGCGCGCGCAATCGAAACTAAAACACGTGCGCACCAAACACGTGTTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM601197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgAAAGTAACATCCACAAATTGAAGATTGAACAATCAAGCTCGAGTGAAGTGAAAGACAGCCAGTAGGGCAGTGAGATTTGTCATACCTGTGGTGGT GGTGTGTGTTTGGCGTGCGCAATCGAAACTAAAACACGTGCGCACCAAACACGTGTTTCGATAGTAAATCATTTTGTATGCCTCTGGTTTTCAGTGCTTGCATAATACAGAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACGGTTTTTGTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTTTTTGTTTTACAAATGAAAGACAGACGCCAACGCATATGATTTCGTGCGATAGTAAACAATTGAACAGGCCATTCGATCATATTATGAAACCCCAATTATGGTGCCAACATTTGCCGAGCAGAAATGGAGGGTTAAGAAAAGCGCGCTCTATAGCTCTGCCATTATTGCATCCTTTGTACATGTGTTTGCTCTGTGTAGGACTATCAGCCCGGCGGGGCAGTGCATTATTGCTTTATAAGGAACGTCCTGTTGCACAGTTGTCTGAAGATACGTACACAGAAAAAGTCATACATGCGCAAACAGAATCAAAAGTTAGTCAAAAACACAAACACACTCACACC TTCTACTAC                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX626766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATGAAAGACAGACGGCAACGCATATGATTTCGTGCGATAGTAAACAATTGAACAGGCCATTCGATCATATTATGAAATCCCAATGATGGTGCCAACTTTTGCCGAGCAGAAATGGAGGGTTAAGAAAAGCGCGC ATATA     GCCATTATTGCATCCTTTGTACATGTGTTTGCTCTGTGTAGGACTATCAGCCCGGCGGGGCAGTGCATTATTGCTTTATAAGGAACGCCCTGTTGCACAGTTGCCTGAACATACATACAAAGAAAAAGTCATACATGCGGAAACAGAATCAAAAGTTAGCCAAAAACACAAACACACTCACACC TTCTACTACAGTAGACGACAAATGGCGATAGCAGGTTACCGTTTAAGGGAGTTTGCGTTTACCCATTTCCGGTGCACTACACTGTACAGCGCACGAAACAGCAGTTAACCGTTGTGTAGTGAAAGCAATAGAAATCAAGGTTTTGTTTTTCTTCCTCTTCAGGATACCACTACAAAGACAAGATGTAATGTCCGGTATACCTTTACATCAATTACTCGTACACGATTTCAACCGCAAACAGTGCCGTGGCGTGCACTGTGGGGGCTTTTATTTTGACTCCGCTTCTTTTGCTGNCCACTCGGCGATTAAACGTTACTAAGGTCTCGGCGAAGCATAAAATAAAAC AGGAACGCAACAATTGAG                                         ]
[+] EMBL AL933317             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccaggttaaCATTATTGCATCCTTTGTACATGTG  TGCTCTGTGTA GACTATCAGCCCGGCGGGGCAGTGCATTATTGCTTTATAAGGAACGCCCTGTTGCACAGTTGCCTGAACATACATACAAAGAAAAAGTCATACATGCGGAAACAGAATCAAAAGTTAGCCAAAAACACAAACACACTCACACCTTTCTACTACAGTAGACGACAAATGGCGATAGCAGGTTACCG TTAAGGGAGTTTGCGTTTACCCATTTCCGGTGCACTACACTGTACAGCGCACGAAACAGCAGTTAACCGTTGTGTAGTGAAAGCAATAGAAATCAAGG TTTGTTTTTCTTCCTCTTCAGGATACCACTACAAAGACAAGATGTAATGTCCGGTATACCTTTACATCAATTACTCGTACACGATTTCAACCGCAAACAGTGCCGTGGCGTGCACTGTGGGGGCTTTTA TTTGACTCCGCTTCTTTTGCTGCCCACTCGGCGATTAAACGTTACTAAGGTCTCGGCGAAGCATAAAATAAAACAAGGAACGCNACAATTGAGAGCCATGGACAAAGACCAAGGGGAAAAGCGTTAAAGCTGTG]
[+] EMBL BX614388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGTTACCGTTTAAGGGAGTTTGCGTTTACCCATTTCCGGTGCACTACACTGTACAGCGCACGAAACAGCAGTTAACCGTTGTGTAGTGAAAGCAATAGCAATCAAGGTTTTGTTTTTCTTCCTCTTCAGGATACCACTACAAAGACAAGATGTAATGTCCGATGTACCTTTACATCTATTACTCGTACACGATTTCAACCGCAAACAGTGCCGTGGCGTGCACTGTGGGGGCTTTTATTTTGACTCCGCTTCTTTTGCTGCCCACTCGGCGATTAAACGTTACTAAGGTCTCGGCGAAGCATAAAATAAAAC AGGAACGCAACAATTGAGAGCAATGGACAAAGAC                         ]


>consensus_8190#0 GCAGAATCCGCACGGAGNGATTTTTCCTTTCCTTTTGTCGCGACTGCTCACATGTATAGT TGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGAG GGCAGCTTTATCCCGCCGATTGCAGGCTGAAATTGCATGGCAGCTAATCCTATAACCTTC TATGCCACTCACGCACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTAC TGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACAT GGTGATGGAATGAGTGAGGCGGTAAAGAGAAGGGACCGGTGGTAGCAAAGACAGTGCAAA GGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAA GCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAG TGGTTTGATGCAAGTCAGATATTTATACCGAGTAAGGAAACTGTGACCGTTGCGCATATC CTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGAGGACGCAGTGAGAAGAT TATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAAAATAAAAAG AGCAGAAACAAAAAGGAACACGAGTGTCACACTGTGGACAAAACATGCCGTAGTATATCG CACCCCTTTTTAAAGTAACATCCACAAATTGAAGATTGAACAATCAAGCTCGAGTGAAGT GAAAGACAGCCAGTAGGGCAGTGAGATTTGTCATACCTGTGGTGGTGGGTGTGTGTGTGG CGCGCGCAATCGAAACTAAAACACGTGCGCACCAAACACGTGTTTCGATAGTAAATCATT TTGTATGCCTCTGGTTTTCAGTGCTTGCATAATACAGAGCTGTCGAAGATTTATAAAGTT AAGCGTTGCGTTACGGTTTTTGTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAG TGTTTTTGTTTTACAAATGAAAGACAGACGCCAACGCATATGATTTCGTGCGATAGTAAA CAATTGAACAGGCCATTCGATCATATTATGAAACCCCAATTATGGTGCCAACATTTGCCG AGCAGAAATGGAGGGTTAAGAAAAGCGCGCTCTATAGCCTGCCATTATTGCATCCTTTGT ACATGTGTTTGCTCTGTGTAGGACTATCAGCCCGGCGGGGCAGTGCATTATTGCTTTATA AGGAACGCCCTGTTGCACAGTTGCCTGAACATACATACAAAGAAAAAGTCATACATGCGG AAACAGAATCAAAAGTTAGCCAAAAACACAAACACACTCACACCTTCTACTACAGTAGAC GACAAATGGCGATAGCAGGTTACCGTTTAAGGGAGTTTGCGTTTACCCATTTCCGGTGCA CTACACTGTACAGCGCACGAAACAGCAGTTAACCGTTGTGTAGTGAAAGCAATAGAAATC AAGGTTTTGTTTTTCTTCCTCTTCAGGATACCACTACAAAGACAAGATGTAATGTCCGGT ATACCTTTACATCAATTACTCGTACACGATTTCAACCGCAAACAGTGCCGTGGCGTGCAC TGTGGGGGCTTTTATTTTGACTCCGCTTCTTTTGCTGCCCACTCGGCGATTAAACGTTAC TAAGGTCTCGGCGAAGCATAAAATAAAACAGGAACGCAACAATTGAGAGCCATGGACAAA GACCAAGGGGAAAAGCGTTAAAGCTGTG



consensusID : consensus_8190#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 818
fasta sequence
                              [TCCCCGCGTTACATATTATGAAATCCCCAATCGCATNGTGTNAACTTTTGCCTGAGCAGAAATGGAGTGGTTAAGAANAAGCTGCGCATATAGCCATTATTGCATCCTTTGTACATGTGTTTGCTCTGTGTAGTGCACTATCAGCCCTGGCGGGGCAGTGCATTATTTGCTATTATAAGTGAACTGCCCTGTTGCACAGTTGCCTGAACATACATACAAATGAACNCAGTCATACATGCGGAAACCANGAATCANAAAGTTAGCAAACANGNCAAAACCAGCATTTTCACACNCTTCTACTACAGTACAACCGACAAAACACTTGGGNNCGCAATCAACGCAAGCGNTANACACCCCGGNNTTANAACTCGAGAACANTATATNGCGTTATAACCCCCANATATTCCCAGTAGTTGCACATTAAACACNCTGNGTTAACACAAGGATTGCCACNTGNAACACCAATGCGCACAGTATTACAACCCCGGAATAGGTCAGTCAGTTNGAAAAANCCACAGTCAGACAAANGTTACAANAAGAANAANAGGNAACAANACACACCTTTTTAACCCATTTACCTTATTACNACAATNACAAATAAACCACCAAAAATTTAAAACCAGAAACACNNAACTCCAACAGANCACATCANNCATCANAAATTGTGTACCCCANCGACTGNTTAAATTNNACACNCCACTTATTTAAACAACAACTTCCACACATAATTTNAACCCATACCAANTAAACACAACANNCAAAAATATAATCACCCAACACACCCNCACAAACCANACACACAACTAGTNAGTCCCANC]

[+] EMBL AL695132             [TCCCCGCGTTACATATTATGAAATCCCCAATCGCATNGTGTNAACTTTTGCCTGAGCAGAAATGGAGTGGTTAAGAANAAGCTGCGCATATAGCCATTATTGCATCCTTTGTACATGTGTTTGCTCTGTGTAGTGCACTATCAGCCCTGGCGGGGCAGTGCATTATTTGCTATTATAAGTGAACTGCCCTGTTGCACAGTTGCCTGAACATACATACAAATGAACNCAGTCATACATGCGGAAACCANGAATCANAAAGTTAGCAAACANGNCAAAACCAGCATTTTCACACNCTTCTACTACAGTACAACCGACAAAACACTTGGGNNCGCAATCAACGCAAGCGNTANACACCCCGGNNTTANAACTCGAGAACANTATATNGCGTTATAACCCCCANATATTCCCAGTAGTTGCACATTAAACACNCTGNGTTAACACAAGGATTGCCACNTGNAACACCAATGCGCACAGTATTACAACCCCGGAATAGGTCAGTCAGTTNGAAAAANCCACAGTCAGACAAANGTTACAANAAGAANAANAGGNAACAANACACACCTTTTTAACCCATTTACCTTATTACNACAATNACAAATAAACCACCAAAAATTTAAAACCAGAAACACNNAACTCCAACAGANCACATCANNCATCANAAATTGTGTACCCCANCGACTGNTTAAATTNNACACNCCACTTATTTAAACAACAACTTCCACACATAATTTNAACCCATACCAANTAAACACAACANNCAAAAATATAATCACCCAACACACCCNCACAAACCANACACACAACTAGTNAGTCCCANC]


>consensus_8190#1 TCCCCGCGTTACATATTATGAAATCCCCAATCGCATNGTGTNAACTTTTGCCTGAGCAGA AATGGAGTGGTTAAGAANAAGCTGCGCATATAGCCATTATTGCATCCTTTGTACATGTGT TTGCTCTGTGTAGTGCACTATCAGCCCTGGCGGGGCAGTGCATTATTTGCTATTATAAGT GAACTGCCCTGTTGCACAGTTGCCTGAACATACATACAAATGAACNCAGTCATACATGCG GAAACCANGAATCANAAAGTTAGCAAACANGNCAAAACCAGCATTTTCACACNCTTCTAC TACAGTACAACCGACAAAACACTTGGGNNCGCAATCAACGCAAGCGNTANACACCCCGGN NTTANAACTCGAGAACANTATATNGCGTTATAACCCCCANATATTCCCAGTAGTTGCACA TTAAACACNCTGNGTTAACACAAGGATTGCCACNTGNAACACCAATGCGCACAGTATTAC AACCCCGGAATAGGTCAGTCAGTTNGAAAAANCCACAGTCAGACAAANGTTACAANAAGA ANAANAGGNAACAANACACACCTTTTTAACCCATTTACCTTATTACNACAATNACAAATA AACCACCAAAAATTTAAAACCAGAAACACNNAACTCCAACAGANCACATCANNCATCANA AATTGTGTACCCCANCGACTGNTTAAATTNNACACNCCACTTATTTAAACAACAACTTCC ACACATAATTTNAACCCATACCAANTAAACACAACANNCAAAAATATAATCACCCAACAC ACCCNCACAAACCANACACACAACTAGTNAGTCCCANC



consensusID : consensus_8190#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence
                              [AGAATCGCCCGAGGTTTAATGTTGGCCATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGTAGATATTTATACCGAGTAAGGAAACCGTGACCGTTGCGCATATCCTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGCGGATGCAGTGAGAAGATTATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAAAAAAAAGAGCAGAAACAAAAAGGAACACGAGTGTCACACTGTGGACAAAACATGCCGTAGTATATCGCACCCTTTTAAAGTAACATCAACAAATGGAAGATAACAATCAAGCTCAGTGAAGTGAAAGACAGCCAGTAGGGCAGTGAGATTTGTCATACCTGTGGTGGTGGTGTGTGTGTGGCGCGCGCAATCGAGACTAGAACACGTGCGCGCCAAACACGTGTCTCGATAGTAAATCATTTTCGTATGCCTCTGGTTTATCAGTGCTTGCATAATACATAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACGGGATTGTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTAAGTTTTACAAATGAAAGACAGACGCCAACGCATATGCATTTCGTGCGATAGTAAACAATTGC]

[+] EMBL AL692292             [AGAATCGCCCGAGGTTTAATGTTGGCCATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGTAGATATTTATACCGAGTAAGGAAACCGTGACCGTTGCGCATATCCTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGCGGATGCAGTGAGAAGATTATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAAAAAAAAGAGCAGAAACAAAAAGGAACACGAGTGTCACACTGTGGACAAAACATGCCGTAGTATATCGCACCCTTTTAAAGTAACATCAACAAATGGAAGATAACAATCAAGCTCAGTGAAGTGAAAGACAGCCAGTAGGGCAGTGAGATTTGTCATACCTGTGGTGGTGGTGTGTGTGTGGCGCGCGCAATCGAGACTAGAACACGTGCGCGCCAAACACGTGTCTCGATAGTAAATCATTTTCGTATGCCTCTGGTTTATCAGTGCTTGCATAATACATAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACGGGATTGTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTAAGTTTTACAAATGAAAGACAGACGCCAACGCATATGCATTTCGTGCGATAGTAAACAATTGC]


>consensus_8190#2 AGAATCGCCCGAGGTTTAATGTTGGCCATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGA TGCAAGTAGATATTTATACCGAGTAAGGAAACCGTGACCGTTGCGCATATCCTAATGGTA GGAGAAACGAGAAGATGTATGTAAAAGAGACAGCGGATGCAGTGAGAAGATTATACCGAA AAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAAAAAAAAGAGCAGAAACAA AAAGGAACACGAGTGTCACACTGTGGACAAAACATGCCGTAGTATATCGCACCCTTTTAA AGTAACATCAACAAATGGAAGATAACAATCAAGCTCAGTGAAGTGAAAGACAGCCAGTAG GGCAGTGAGATTTGTCATACCTGTGGTGGTGGTGTGTGTGTGGCGCGCGCAATCGAGACT AGAACACGTGCGCGCCAAACACGTGTCTCGATAGTAAATCATTTTCGTATGCCTCTGGTT TATCAGTGCTTGCATAATACATAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACG GGATTGTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTAAGTTTTACAAAT GAAAGACAGACGCCAACGCATATGCATTTCGTGCGATAGTAAACAATTGC



consensusID : consensus_8190#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence
                              [TTGTCAAAACTGTAAAAAAAGGGTGTGGATTTGATTGCCACCTGTGTATTGCATGTGTTTCCAGAATGCTGTTATTAAGCATTCTTTCCTAAAATGTCTATGTTTTGTGTTGATAAATTATTATTGTTTGTAATTCACTCTTTTTCCTTTCCTTTTGTTAGGACTGCTCACATGTATAGTTGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGGGGCAGCTTTATCCCGCCGATTGCATGCTGAAATTGCATGGCAGCTAATCCTATAACCTTCTATGCCACTCACACACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTACTGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACATGGTGATGGAATGAGTGAGGCGGTAAAGTGAAGGGACCGGTGGTAGCAAAGACAGTGTAAAGGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAGGCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGTAGATATTTATACC]

[+] EMBL BX616083             [TTGTCAAAACTGTAAAAAAAGGGTGTGGATTTGATTGCCACCTGTGTATTGCATGTGTTTCCAGAATGCTGTTATTAAGCATTCTTTCCTAAAATGTCTATGTTTTGTGTTGATAAATTATTATTGTTTGTAATTCACTCTTTTTCCTTTCCTTTTGTTAGGACTGCTCACATGTATAGTTGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGGGGCAGCTTTATCCCGCCGATTGCATGCTGAAATTGCATGGCAGCTAATCCTATAACCTTCTATGCCACTCACACACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTACTGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACATGGTGATGGAATGAGTGAGGCGGTAAAGTGAAGGGACCGGTGGTAGCAAAGACAGTGTAAAGGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAGGCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAGTGGTTTGATGCAAGTAGATATTTATACC]


>consensus_8190#3 TTGTCAAAACTGTAAAAAAAGGGTGTGGATTTGATTGCCACCTGTGTATTGCATGTGTTT CCAGAATGCTGTTATTAAGCATTCTTTCCTAAAATGTCTATGTTTTGTGTTGATAAATTA TTATTGTTTGTAATTCACTCTTTTTCCTTTCCTTTTGTTAGGACTGCTCACATGTATAGT TGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGGG GCAGCTTTATCCCGCCGATTGCATGCTGAAATTGCATGGCAGCTAATCCTATAACCTTCT ATGCCACTCACACACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTACT GTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACATG GTGATGGAATGAGTGAGGCGGTAAAGTGAAGGGACCGGTGGTAGCAAAGACAGTGTAAAG GGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAGG CTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAATGTGAGAGGCAAGGAGT GGTTTGATGCAAGTAGATATTTATACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8190#0      GCAGAATCCGCACGGAGNGATTTTTCCTTTCCTTTTGTCGCGACTGCTCACATGTATAGT 60
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      TGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTAACGTTTCGAG 120
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      GGCAGCTTTATCCCGCCGATTGCAGGCTGAAATTGCATGGCAGCTAATCCTATAACCTTC 180
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      TATGCCACTCACGCACACACACAAACATACCCACACCGTTAGATTAGGAGTGGAAGGTAC 240
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      TGTATGGCATGAAAGTAGCATTAATAGTAACTGTATATCATAAGACTGAACCAAGAACAT 300
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      GGTGATGGAATGAGTGAGGCGGTAAAGAGAAGGGACCGGTGGTAGCAAAGACAGTGCAAA 360
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      GGGAGGGGGTACACACGCAGGACCTTCGTTTGTTATCCTATATATATGTAGGCAGGTAAA 420
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------TCCCCGCGTTAC 12
                                                                                  

consensus_8190#0      GCTGTAGGTGAGCTGGATGCGGTTAATGTTGGCCAATGTGCCAA-TGTGAGAGGCAAGGA 479
consensus_8190#2      -----AGAATCGCCCGAGGT--TTAATGTTGGCCA-TGTGCCAA-TGTGAGAGGCAAGGA 51
consensus_8190#3      TTGTCAAAACTGTAAAAAAA---GGGTGTGGATTTGATTGCCACCTGTGTATTGCATGTG 57
consensus_8190#1      ATATTATGAAATCCCCAATCGCATNGTGTNAACTT--TTGCCTGAGCAGAAATGGAGTGG 70
                           *          *         ***         ****      *    * *    

consensus_8190#0      GTGGTTTGATGCAA---GT-CAGATATT----TATACCGAGTAAGGAAACTGTGACCGTT 531
consensus_8190#2      GTGGTTTGATGCAA---GT--AGATATT----TATACCGAGTAAGGAAACCGTGACCGTT 102
consensus_8190#3      TTTCCAGAATGCTGT-TAT-TAAGCATT----CTTTCCTAAAATGTCTATGTTTTGTGTT 111
consensus_8190#1      TTAAGAANAAGCTGCGCATATAGCCATTATTGCATCCTTTGTACATGTGTTTGCTCTGTG 130
                       *      * **      *  *   ***      * *     *              ** 

consensus_8190#0      GCGCATATCCTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGAGGACGCAG 591
consensus_8190#2      GCGCATATCCTAATGGTAGGAGAAACGAGAAGATGTATGTAAAAGAGACAGCGGATGCAG 162
consensus_8190#3      G-ATAAATTATTATTGTTTGTAATTCACTCTTTTTCCTTTCCTTTTGTTAGGACTGCTCA 170
consensus_8190#1      TAGTGCACTATCAGCCCTGGCGGGGCAGTGCATTATTTGCTATTATAAGTGAACTGCCCT 190
                            *   * *      *     *       *   *            *         

consensus_8190#0      TGAGAAGATTATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAA 651
consensus_8190#2      TGAGAAGATTATACCGAAAAGTGAGATTAAATTGTGGTTCGTGTGGGATGGAAGGGAGAA 222
consensus_8190#3      CATGTATAGTTGACCACAAGATTGTTTCCTTCCTTCTTTTTTTCCTTGCGTTACGTTGTA 230
consensus_8190#1      GTTGCACAGTTGCCTGAACATACATACAAATGAACNCAGTCATACATGCGGAAACCANGA 250
                         * * * *   *   *                               *  *      *

consensus_8190#0      AATAAAAAGAGCAGAAACAAAAAGGAACACGAGTGTC-ACA---CTGTG-GACAAAACAT 706
consensus_8190#2      A--AAAAAGAGCAGAAACAAAAAGGAACACGAGTGTC-ACA---CTGTG-GACAAAACAT 275
consensus_8190#3      ACGTTTCGGGGCAGCTTTATCCCGCCGATTGCATGCTGAAA---TTGCATGGCAGCTAAT 287
consensus_8190#1      ATCANAAAGTTAGCAAACANGNCAAAACCAGCATTTTCACACNCTTCTACTACAGTACAA 310
                      *       *         *           *  *    * *    *      **    * 

consensus_8190#0      GC--CGTAGTATATCGCACCCCTTTTTAAAGTAAC-ATCCACAAATTGAAGATTGAAC-- 761
consensus_8190#2      GC--CGTAGTATATCGCACCC--TTTTAAAGTAAC-ATCAACAAATGGAAGAT--AAC-- 326
consensus_8190#3      CC--TATAACCTTCTATGCCAC-TCACACACACAC-ACAAACATACCCAC------AC-- 335
consensus_8190#1      CCGACAAAACACTTGGGNNCGCAATCAACGCAAGCGNTANACACCCCGGNNTTANAACTC 370
                       *     *           *       *      *     ***             **  

consensus_8190#0      -----AATCAAGCTCGAGTGAAGTG---AAAGACAGCCAGTAGG---GCAGTGAGA--TT 808
consensus_8190#2      -----AATCAAGCTC-AGTGAAGTG---AAAGACAGCCAGTAGG---GCAGTGAGA--TT 372
consensus_8190#3      -----CGTTAGATTA----GGAGTG---GAAGGTA--CTGTATG---GCA-TGAAA--GT 375
consensus_8190#1      GAGAACANTATATNGCGTTATAACCCCCANATATTCCCAGTAGTTGCACATTAAACACNC 430
                               *           *        *      * ***      ** * *      

consensus_8190#0      TGTCATACCT--GTGGTGGTGGGT-GTGTGTGTGGCGCGCGCA----ATCGAAACTAAAA 861
consensus_8190#2      TGTCATACCT--GTGGTGGTGG-T-GTGTGTGTGGCGCGCGCA----ATCGAGACTAGAA 424
consensus_8190#3      AGCATTAATA--GTAACTGTATATCATAAGACTGAACCAAGAA----CATGGTGATGGAA 429
consensus_8190#1      TGNGTTAACACAAGGATTGCCACNTGNAACACCAATGCGCACAGTATTACAACCCCGGAA 490
                       *   **           *                  *    *               **

consensus_8190#0      CACGTGCGC--ACCAAACACGTGTTTCGATAGTAAATCATTTT-GTATGCCTCTGGTTT- 917
consensus_8190#2      CACGTGCGC--GCCAAACACGTGTCTCGATAGTAAATCATTTTCGTATGCCTCTGGTTTA 482
consensus_8190#3      TGAGTGAGGCGGTAAAGTGAAGGGACCGGTGGTAGCAAAGACA---GTGTAAAGGGAGGG 486
consensus_8190#1      TAGGTCAGTCAGTTNGAAAAANCCACAGTCAGACAAANGTTACAANAAGAANAANAGGNA 550
                         **  *                   *   *                *           

consensus_8190#0      TCAGTGCTTGCATAAT--ACAGAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACG 975
consensus_8190#2      TCAGTGCTTGCATAAT--ACATAGCTGTCGAAGATTTATAAAGTTAAGCGTTGCGTTACG 540
consensus_8190#3      GGTACACACGCAGGAC--CTTCGTTTGTT-ATCCTATATATATGTAGGCA----GGTAAG 539
consensus_8190#1      ACAANACACACCTTTTTAACCCATTTACCTTATTACNACAATNACAAATAAACCACCAAA 610
                            *   *              *           * *     *           *  

consensus_8190#0      GTTTTT-GTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTTTTTGTTTTAC 1034
consensus_8190#2      GGATT--GTTGAGCAATTTTAGTATTGTGTTGAGCAGTGTTAGCAGTGTA--AGTTTTAC 596
consensus_8190#3      GCTGTA-GGTGAGCTGGATGCGGTTAATGTTGGCCAATGT-GCCAATGTGAGAG----GC 593
consensus_8190#1      AATTTAAAACCAGAAACACNNAACTCCAACAGANCACATCANNCATCANA--AATTGTGT 668
                          *      **           *      *  **       **               

consensus_8190#0      AAATGAAAGACAGACGCCAACGCATATG-ATTTCGTGCGATAGTAAACAATTGAACAGGC 1093
consensus_8190#2      AAATGAAAGACAGACGCCAACGCATATGCATTTCGTGCGATAGTAAACAATTGC------ 650
consensus_8190#3      AAGGAGTGGTTTGATGCAAGTAGATATTTATACC-------------------------- 627
consensus_8190#1      ACCCCANCGACTGNTTAAATTNNACACNCCACTTATTTAAACAACAACTTCCACACATAA 728
                      *       *   *     *    * *                                  

consensus_8190#0      CATTCGATCATATTATGAAACCCCAATTATGGTGCCAACATTTGCCGAGCAGAAATGGAG 1153
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      TTTNAACCCATACCAANTAAACACAACANNCAAAAATATAATCACCCAACACACCCNCAC 788
                                                                                  

consensus_8190#0      GGTTAAGAAAAGCGCGCTCTATAGCCTGCCATTATTGCATCCTTTGTACATGTGTTTGCT 1213
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      AAACCANACACACAACTAGTNAGTCCCANC------------------------------ 818
                                                                                  

consensus_8190#0      CTGTGTAGGACTATCAGCCCGGCGGGGCAGTGCATTATTGCTTTATAAGGAACGCCCTGT 1273
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      TGCACAGTTGCCTGAACATACATACAAAGAAAAAGTCATACATGCGGAAACAGAATCAAA 1333
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      AGTTAGCCAAAAACACAAACACACTCACACCTTCTACTACAGTAGACGACAAATGGCGAT 1393
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      AGCAGGTTACCGTTTAAGGGAGTTTGCGTTTACCCATTTCCGGTGCACTACACTGTACAG 1453
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      CGCACGAAACAGCAGTTAACCGTTGTGTAGTGAAAGCAATAGAAATCAAGGTTTTGTTTT 1513
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      TCTTCCTCTTCAGGATACCACTACAAAGACAAGATGTAATGTCCGGTATACCTTTACATC 1573
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      AATTACTCGTACACGATTTCAACCGCAAACAGTGCCGTGGCGTGCACTGTGGGGGCTTTT 1633
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      ATTTTGACTCCGCTTCTTTTGCTGCCCACTCGGCGATTAAACGTTACTAAGGTCTCGGCG 1693
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      AAGCATAAAATAAAACAGGAACGCAACAATTGAGAGCCATGGACAAAGACCAAGGGGAAA 1753
consensus_8190#2      ------------------------------------------------------------
consensus_8190#3      ------------------------------------------------------------
consensus_8190#1      ------------------------------------------------------------
                                                                                  

consensus_8190#0      AGCGTTAAAGCTGTG 1768
consensus_8190#2      ---------------
consensus_8190#3      ---------------
consensus_8190#1      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)