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Anopheles gambiae
cluster # 8191 cluster # 8191       Sequences # 9       consensus # 8


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8191#0 length = 669 sequences # 1  
consensus_8191#1 length = 636 sequences # 1  
consensus_8191#2 length = 622 sequences # 2  
consensus_8191#3 length = 620 sequences # 1  
consensus_8191#4 length = 609 sequences # 1  
consensus_8191#5 length = 590 sequences # 1  
consensus_8191#6 length = 571 sequences # 1  
consensus_8191#7 length = 416 sequences # 1  

consensusID : consensus_8191#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence
                              [CCGGCGCCAAATGTACGCAAACAAATAGAACCATTCGCATTCGCGCAAAAATGTGCAAAAATAATATGGAAACGGCAAACAACAATTGCCGGCAACAATTAACATTCCGTTACGATGGTTTTGCGGAAAATGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAAAAGGATGAAATGAAATAAGTTAGGAAAGTAGACGGTAAAGGTAAAGCTGCATTTTAAAGAAAGAGAGAAAAAAAACGCAAAACGCATGTTGTGAAATGAAACAAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCAAATGTGGCAAGGCAAATGTGTAATTCTAAATGTATACAAAGCATAAATAATATTAAATACACTATAACGTACACAAAAACACACAAACACACACTTGCGCCGTATCGGAATAGTAGGGCACTTCTCAGCAAAAAAACCAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACGGATTGGTTTTGTTTCGTTGCAGGCCCCTATTTTGTCCCCCCCCCCCCCCCTCTCCCCTTATTTTCAAATGGCACTTTGCAACATGCATCTCTTTGAGCAAAGAGAAATGGTTATTTATTGCGGTTAGCCTGATACAACTACACTTAAGATACGATTTATGTTT]

[+] EMBL BM626376             [CCGGCGCCAAATGTACGCAAACAAATAGAACCATTCGCATTCGCGCAAAAATGTGCAAAAATAATATGGAAACGGCAAACAACAATTGCCGGCAACAATTAACATTCCGTTACGATGGTTTTGCGGAAAATGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAAAAGGATGAAATGAAATAAGTTAGGAAAGTAGACGGTAAAGGTAAAGCTGCATTTTAAAGAAAGAGAGAAAAAAAACGCAAAACGCATGTTGTGAAATGAAACAAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCAAATGTGGCAAGGCAAATGTGTAATTCTAAATGTATACAAAGCATAAATAATATTAAATACACTATAACGTACACAAAAACACACAAACACACACTTGCGCCGTATCGGAATAGTAGGGCACTTCTCAGCAAAAAAACCAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACGGATTGGTTTTGTTTCGTTGCAGGCCCCTATTTTGTCCCCCCCCCCCCCCCTCTCCCCTTATTTTCAAATGGCACTTTGCAACATGCATCTCTTTGAGCAAAGAGAAATGGTTATTTATTGCGGTTAGCCTGATACAACTACACTTAAGATACGATTTATGTTT]


>consensus_8191#0 CCGGCGCCAAATGTACGCAAACAAATAGAACCATTCGCATTCGCGCAAAAATGTGCAAAA ATAATATGGAAACGGCAAACAACAATTGCCGGCAACAATTAACATTCCGTTACGATGGTT TTGCGGAAAATGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAAGGAAAAAGGATGAAATGAAATAAGTTAGGAAAGTAGACGGTAAAGGTAAAGCTG CATTTTAAAGAAAGAGAGAAAAAAAACGCAAAACGCATGTTGTGAAATGAAACAAAACGA AACACGAAGAAGAGTAAGTAAAACCGCCAGTCAAATGTGGCAAGGCAAATGTGTAATTCT AAATGTATACAAAGCATAAATAATATTAAATACACTATAACGTACACAAAAACACACAAA CACACACTTGCGCCGTATCGGAATAGTAGGGCACTTCTCAGCAAAAAAACCAGGAAAGCC AATTAAGACAAAGATTTGTGCAAACGGATTGGTTTTGTTTCGTTGCAGGCCCCTATTTTG TCCCCCCCCCCCCCCCTCTCCCCTTATTTTCAAATGGCACTTTGCAACATGCATCTCTTT GAGCAAAGAGAAATGGTTATTTATTGCGGTTAGCCTGATACAACTACACTTAAGATACGA TTTATGTTT



consensusID : consensus_8191#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence
                              [AATCCCCCGNCGGTTAATGTGACATTGGTATAGAATAGTAAGGAACGTTCTTATCAAAATCATATCCAGCTGCCAATGGAATGGTAAAGCGGTTAGGGGAGAGAAAATCTAACACAAGGTCTTTCCGATCTCATAGAGCAAAACAGTAGCAGAATGAAGGACCGATTTAATAACGCAGCAGAGATGCTGGATTGCGTACGTACGCGCATGATACTCTTTAGTGGTGGTGGTAGCCGAGCAATGTGTGCCGTTACTTCCCGGATAGTAAGCGGCATGGTGGTGTGAAGCAAGCAGACACAAAAGAAATGAAGCAAAGTAAGATATAAAGCACGCAAAGCAAAACAATCTTATTCGAACATAGAGCGAACTATAGCTGCATGACTGATGATAGGCAGGCAAAAAACGCAACACGGNNAAACTGGATTCAACAGGGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACAACCGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGAAAACGAAAGCAACAAAAAAACAACAACAAAACTATAGCAAAACTANATAAATAAGAAACAAAAANACACACCCACCCACACACNC]

[+] EMBL AL692238             [AATCCCCCGNCGGTTAATGTGACATTGGTATAGAATAGTAAGGAACGTTCTTATCAAAATCATATCCAGCTGCCAATGGAATGGTAAAGCGGTTAGGGGAGAGAAAATCTAACACAAGGTCTTTCCGATCTCATAGAGCAAAACAGTAGCAGAATGAAGGACCGATTTAATAACGCAGCAGAGATGCTGGATTGCGTACGTACGCGCATGATACTCTTTAGTGGTGGTGGTAGCCGAGCAATGTGTGCCGTTACTTCCCGGATAGTAAGCGGCATGGTGGTGTGAAGCAAGCAGACACAAAAGAAATGAAGCAAAGTAAGATATAAAGCACGCAAAGCAAAACAATCTTATTCGAACATAGAGCGAACTATAGCTGCATGACTGATGATAGGCAGGCAAAAAACGCAACACGGNNAAACTGGATTCAACAGGGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACAACCGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGAAAACGAAAGCAACAAAAAAACAACAACAAAACTATAGCAAAACTANATAAATAAGAAACAAAAANACACACCCACCCACACACNC]


>consensus_8191#1 AATCCCCCGNCGGTTAATGTGACATTGGTATAGAATAGTAAGGAACGTTCTTATCAAAAT CATATCCAGCTGCCAATGGAATGGTAAAGCGGTTAGGGGAGAGAAAATCTAACACAAGGT CTTTCCGATCTCATAGAGCAAAACAGTAGCAGAATGAAGGACCGATTTAATAACGCAGCA GAGATGCTGGATTGCGTACGTACGCGCATGATACTCTTTAGTGGTGGTGGTAGCCGAGCA ATGTGTGCCGTTACTTCCCGGATAGTAAGCGGCATGGTGGTGTGAAGCAAGCAGACACAA AAGAAATGAAGCAAAGTAAGATATAAAGCACGCAAAGCAAAACAATCTTATTCGAACATA GAGCGAACTATAGCTGCATGACTGATGATAGGCAGGCAAAAAACGCAACACGGNNAAACT GGATTCAACAGGGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAG AGAAAGGAACACAACCGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGG TAACAAAACGAAAACGAAAGCAACAAAAAAACAACAACAAAACTATAGCAAAACTANATA AATAAGAAACAAAAANACACACCCACCCACACACNC



consensusID : consensus_8191#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 622
fasta sequence
                              [AATATGGAAACAGCAAACAACAATTGCCGACAACAATTAACATTCCGTTCCGATGGTTTTGCGGAAAATGGAAGAGAGAGAGAGAGATAGAGAAGGAAAAAAGATGAAATGAAATAAGTTAGGAAAGTAGACGGTAAACGCAAAGCTGCATTTTAAAGAAAGAGAAAAAAAAACGCAAAACGCATGTTGTGAAATGAAACAAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCAGGGGACAGAAAGGCAAATGTGTAATTCTAAATGTATACAAAGCATAAATAATATTAAATACACTACACTAACGTACACAAAAACACACAAACACACACACTTGCGCCGTATCGGAATAGTAGGGCACTTTACAGTAAAAAACAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACGTGGATTGGTTTTGTTTCGTGGTCAGCCTATTATGTCCCCCCCCCCTCCCCTTATTTTCAAATGGCACTTTGCAACATGCATCTCTTTGCGCAAAGAGAAATGGTTATTTATTGCGGTTAGCCTGATACAACTACACTTAAGATACGATTTATGTTTTTTTTATTATTATTTTTATGGGNTTCAATAAAGTGCAAATTCATTCATC]

[+] EMBL BX626590             [AATATGGAAACAGCAAACAACAATTGCCGACAACAATTAACATTCCGTTCCGATGGTTTTGCGGAAAATGGAAGAGAGAGAGAGAGATAGAGAAGGAAAAAAGATGAAATGAAATAAGTTAGGAAAGTAGACGGTAAACGCAAAGCTGCATTTTAAAGAAAGAGAAAAAAAAACGCAAAACGCATGTTGTGAAATGAAACAAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCAGGGGACAGAAAGGCAAATGTGTAATTCTAAATGTATACAAAGCATAAATAATATTAAATACACTACACTAACGTACACAAAAACACACAAACACACACACTTGCGCCGTATCGGAATAGTAGGGCACTTTACAGTAAAAAACAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACGTGGATTGGTTTTGTTTCGTGGTCAGCCTATTATGTCCCCCCCCCCTCCCCTTATTTTCAAATGGCACTTTGCAACATGCATCTCTTTGCGCAAAGAGAAATGGTTATTTATTGCGGTTAGCCTGATACAACTACACTTAAGATACGATTTATGTTTTTTTTATTATTATTTTTATGGGNTTCAATAAAGTGCAAATTCATTCATC]
[+] EMBL BX610063             [                                                                     GGAAGAGAGAGAGAGAGAGAGAGAAGGAAAAAAGATGAAATGAAATAAGTTAGGAAAGTAGACGGGAAACGCAAAGCTGCATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_8191#2 AATATGGAAACAGCAAACAACAATTGCCGACAACAATTAACATTCCGTTCCGATGGTTTT GCGGAAAATGGAAGAGAGAGAGAGAGATAGAGAAGGAAAAAAGATGAAATGAAATAAGTT AGGAAAGTAGACGGTAAACGCAAAGCTGCATTTTAAAGAAAGAGAAAAAAAAACGCAAAA CGCATGTTGTGAAATGAAACAAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCA GGGGACAGAAAGGCAAATGTGTAATTCTAAATGTATACAAAGCATAAATAATATTAAATA CACTACACTAACGTACACAAAAACACACAAACACACACACTTGCGCCGTATCGGAATAGT AGGGCACTTTACAGTAAAAAACAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACGTGG ATTGGTTTTGTTTCGTGGTCAGCCTATTATGTCCCCCCCCCCTCCCCTTATTTTCAAATG GCACTTTGCAACATGCATCTCTTTGCGCAAAGAGAAATGGTTATTTATTGCGGTTAGCCT GATACAACTACACTTAAGATACGATTTATGTTTTTTTTATTATTATTTTTATGGGNTTCA ATAAAGTGCAAATTCATTCATC



consensusID : consensus_8191#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 620
fasta sequence
                              [CCGCAAAACTTTTATCCAAAAACAAACAAAAAAAACCGGGCCATAGCCATCAGAATGCCACTAGTTAAAATATATTTATAAAATAAAAGTAACTACTTACGCGATCGTACAGGCGAACACACACACACGCACACACAGCAGATCAGAAGGACCCCAGTAGGATGGATGGAGAAAAAGGCTCGCGAAGCGTGCGCCACCGTTTCCTTGCACAAGCAATGCACGTGGCTAGAGAAAAGAGAAAGAGAAGAGAAAACACGGTAATTAATAAGTTATCTCAAGAGCGTCAGTGAATTGTGAAATGCACACGCGGGCAACATTGAATCTAAACTATAGCTGCAAGAACAATGCAACAAGAAACATGCGGAACTCCCCCCGCAGGAAGCAATGTCCAAAACCGAGCAAAAGAAAGTCAGATTCGAATCATAGAGCGAACTGTAGCTGTATGATGATGATAGGCAGGCAAAAAAGAATGGAAAAACTGGATTCAAAGTGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACATCCGAGATTAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGAAAACGAAAGC]

[+] EMBL BM600592             [CCGCAAAACTTTTATCCAAAAACAAACAAAAAAAACCGGGCCATAGCCATCAGAATGCCACTAGTTAAAATATATTTATAAAATAAAAGTAACTACTTACGCGATCGTACAGGCGAACACACACACACGCACACACAGCAGATCAGAAGGACCCCAGTAGGATGGATGGAGAAAAAGGCTCGCGAAGCGTGCGCCACCGTTTCCTTGCACAAGCAATGCACGTGGCTAGAGAAAAGAGAAAGAGAAGAGAAAACACGGTAATTAATAAGTTATCTCAAGAGCGTCAGTGAATTGTGAAATGCACACGCGGGCAACATTGAATCTAAACTATAGCTGCAAGAACAATGCAACAAGAAACATGCGGAACTCCCCCCGCAGGAAGCAATGTCCAAAACCGAGCAAAAGAAAGTCAGATTCGAATCATAGAGCGAACTGTAGCTGTATGATGATGATAGGCAGGCAAAAAAGAATGGAAAAACTGGATTCAAAGTGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACATCCGAGATTAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGAAAACGAAAGC]


>consensus_8191#3 CCGCAAAACTTTTATCCAAAAACAAACAAAAAAAACCGGGCCATAGCCATCAGAATGCCA CTAGTTAAAATATATTTATAAAATAAAAGTAACTACTTACGCGATCGTACAGGCGAACAC ACACACACGCACACACAGCAGATCAGAAGGACCCCAGTAGGATGGATGGAGAAAAAGGCT CGCGAAGCGTGCGCCACCGTTTCCTTGCACAAGCAATGCACGTGGCTAGAGAAAAGAGAA AGAGAAGAGAAAACACGGTAATTAATAAGTTATCTCAAGAGCGTCAGTGAATTGTGAAAT GCACACGCGGGCAACATTGAATCTAAACTATAGCTGCAAGAACAATGCAACAAGAAACAT GCGGAACTCCCCCCGCAGGAAGCAATGTCCAAAACCGAGCAAAAGAAAGTCAGATTCGAA TCATAGAGCGAACTGTAGCTGTATGATGATGATAGGCAGGCAAAAAAGAATGGAAAAACT GGATTCAAAGTGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGA GAAAGGAACACATCCGAGATTAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGT AACAAAACGAAAACGAAAGC



consensusID : consensus_8191#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence
                              [AGCAAAAAAAAAACAACAACAAAACTATAGCAAAAATAAATAAATAAGAAACAAAAAGAAACACAAAACATATTTATATTGTTCCAGTGCATTGGGTTTTGTTTTGATAGTGATAACACAAACAGAAGCAAAACAGAAGAAGCAACATAGCATGAGATTAATTTTCCACTAAAACCACTTTGTGTACTGTGTTAGGACATTTTAATATGAACGAAAATTGTAGAACTGTGACAAGGAGGGGGAGTAAGATGAAAAAAAGAAGAAGAAAGAAGAAGAAAAAACAACCACAGAAAACACAACATAAAACAAGTAAAAGTAACGAAAAAAAAAAAAAGATTAGCAAAAACCCATACAAAGCAAATGGATATTATAAGCACAAAAACAACATAACAAAGACACACAAAAACACACACACACACACAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAAGGGAAGATTAGATGGAATACATAGAAGAGAAGAAGCAGCAGTGAAGCAGAACAGTACACAGAGAGCGGTAAAATGCGTAATACAACAAGGTGACATATGTATCGTTTCGTCATAACTTTAAACGAGGAAAAACAAAAAGACAGAAAATAAAC]

[+] EMBL BX612969             [AGCAAAAAAAAAACAACAACAAAACTATAGCAAAAATAAATAAATAAGAAACAAAAAGAAACACAAAACATATTTATATTGTTCCAGTGCATTGGGTTTTGTTTTGATAGTGATAACACAAACAGAAGCAAAACAGAAGAAGCAACATAGCATGAGATTAATTTTCCACTAAAACCACTTTGTGTACTGTGTTAGGACATTTTAATATGAACGAAAATTGTAGAACTGTGACAAGGAGGGGGAGTAAGATGAAAAAAAGAAGAAGAAAGAAGAAGAAAAAACAACCACAGAAAACACAACATAAAACAAGTAAAAGTAACGAAAAAAAAAAAAAGATTAGCAAAAACCCATACAAAGCAAATGGATATTATAAGCACAAAAACAACATAACAAAGACACACAAAAACACACACACACACACAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAAGGGAAGATTAGATGGAATACATAGAAGAGAAGAAGCAGCAGTGAAGCAGAACAGTACACAGAGAGCGGTAAAATGCGTAATACAACAAGGTGACATATGTATCGTTTCGTCATAACTTTAAACGAGGAAAAACAAAAAGACAGAAAATAAAC]


>consensus_8191#4 AGCAAAAAAAAAACAACAACAAAACTATAGCAAAAATAAATAAATAAGAAACAAAAAGAA ACACAAAACATATTTATATTGTTCCAGTGCATTGGGTTTTGTTTTGATAGTGATAACACA AACAGAAGCAAAACAGAAGAAGCAACATAGCATGAGATTAATTTTCCACTAAAACCACTT TGTGTACTGTGTTAGGACATTTTAATATGAACGAAAATTGTAGAACTGTGACAAGGAGGG GGAGTAAGATGAAAAAAAGAAGAAGAAAGAAGAAGAAAAAACAACCACAGAAAACACAAC ATAAAACAAGTAAAAGTAACGAAAAAAAAAAAAAGATTAGCAAAAACCCATACAAAGCAA ATGGATATTATAAGCACAAAAACAACATAACAAAGACACACAAAAACACACACACACACA CAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAAGGGAAGATTAGATGGAATACATA GAAGAGAAGAAGCAGCAGTGAAGCAGAACAGTACACAGAGAGCGGTAAAATGCGTAATAC AACAAGGTGACATATGTATCGTTTCGTCATAACTTTAAACGAGGAAAAACAAAAAGACAG AAAATAAAC



consensusID : consensus_8191#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [ACAAAAAAAAAACAACAAAAACCGGGCCATAGCCATCAGAATGCCACTAGTTAAAATATATTTATAAAATAAAATTAACTACTTACGCGATCGTACAGACGAACACACACAGACACACACAGGCACACAAACAACAGATCAGCAGAACACCGCAGTAGATGCAGAAAAAGGCTAGCGAAGCGTGCGCCACCGTTTCCTTGCACAAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAGAAAGAAAACACGGTAATATAAGTCAAGTATAATCTCAAGAGCGTCTGTGAATTGTGAAATGCAAACTATACTATAGCTGCAAGAGGCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGAAAGCAATGTCCAAAACCGAGCAAAAGAAAGTCAGATTCGAACATAGAGCGAACTATAGCTGCATGATGATGATAGGCAGGCAAAAAAGAAAGGAAAAACTGGATTAAAAGGGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACAACCGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGA]

[+] EMBL BX613658             [ACAAAAAAAAAACAACAAAAACCGGGCCATAGCCATCAGAATGCCACTAGTTAAAATATATTTATAAAATAAAATTAACTACTTACGCGATCGTACAGACGAACACACACAGACACACACAGGCACACAAACAACAGATCAGCAGAACACCGCAGTAGATGCAGAAAAAGGCTAGCGAAGCGTGCGCCACCGTTTCCTTGCACAAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAGAAAGAAAACACGGTAATATAAGTCAAGTATAATCTCAAGAGCGTCTGTGAATTGTGAAATGCAAACTATACTATAGCTGCAAGAGGCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGAAAGCAATGTCCAAAACCGAGCAAAAGAAAGTCAGATTCGAACATAGAGCGAACTATAGCTGCATGATGATGATAGGCAGGCAAAAAAGAAAGGAAAAACTGGATTAAAAGGGACAGGAACATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACAACCGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGA]


>consensus_8191#5 ACAAAAAAAAAACAACAAAAACCGGGCCATAGCCATCAGAATGCCACTAGTTAAAATATA TTTATAAAATAAAATTAACTACTTACGCGATCGTACAGACGAACACACACAGACACACAC AGGCACACAAACAACAGATCAGCAGAACACCGCAGTAGATGCAGAAAAAGGCTAGCGAAG CGTGCGCCACCGTTTCCTTGCACAAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAG AAAGAAAACACGGTAATATAAGTCAAGTATAATCTCAAGAGCGTCTGTGAATTGTGAAAT GCAAACTATACTATAGCTGCAAGAGGCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGA AAGCAATGTCCAAAACCGAGCAAAAGAAAGTCAGATTCGAACATAGAGCGAACTATAGCT GCATGATGATGATAGGCAGGCAAAAAAGAAAGGAAAAACTGGATTAAAAGGGACAGGAAC ATCGATTCGAATCAAGCGTTCGCAACTACTAGAGCAAAGAGAAAGGAACACAACCGAGAA TAAACGATGCGTGTAATGCATAAACTTAAGCTTCAGCGGTAACAAAACGA



consensusID : consensus_8191#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 571
fasta sequence
                              [GTTTCCTTGCACAAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAGAAAGAAAACACGGTAATATAAGTCAAGTATAATCTCAAGAGCGTCTGTGAATTGTGAAATGCAAACTATACTATAGCTGCAAGAGGCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGAAAGCAATGTCCAAAACCCATACAAAGCAAATGGATATTATAAGCACAAAAACAACATAACAAAGACACACAAAAACACACACACACACACAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAAGGGAAGATTAGATGGAATACATAGAAGAGTACTAGGAAAGCGACACAATCAATGGTTGTTGGCTAATGCTGTCTCAACAACTGAATCAATCCGAAAAATGATAAAAAAGTAAGCGAAGAAAGGAAAACAAAATGGGTTATTATTATAATTAGCGAGGGCTGGAAACAGAGGGAATTAAAATTAAAATCTATTCCGAGAAGAGAAGGTGACTGTATTCGGTAAAAAAGCGTAATGCGAGAAGAATGCAAAAATAAAACCAACAATACATTGGAAATT]

[+] EMBL BX618905             [GTTTCCTTGCACAAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAGAAAGAAAACACGGTAATATAAGTCAAGTATAATCTCAAGAGCGTCTGTGAATTGTGAAATGCAAACTATACTATAGCTGCAAGAGGCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGAAAGCAATGTCCAAAACCCATACAAAGCAAATGGATATTATAAGCACAAAAACAACATAACAAAGACACACAAAAACACACACACACACACAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAAGGGAAGATTAGATGGAATACATAGAAGAGTACTAGGAAAGCGACACAATCAATGGTTGTTGGCTAATGCTGTCTCAACAACTGAATCAATCCGAAAAATGATAAAAAAGTAAGCGAAGAAAGGAAAACAAAATGGGTTATTATTATAATTAGCGAGGGCTGGAAACAGAGGGAATTAAAATTAAAATCTATTCCGAGAAGAGAAGGTGACTGTATTCGGTAAAAAAGCGTAATGCGAGAAGAATGCAAAAATAAAACCAACAATACATTGGAAATT]


>consensus_8191#6 GTTTCCTTGCACAAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAGAAAGAAAACAC GGTAATATAAGTCAAGTATAATCTCAAGAGCGTCTGTGAATTGTGAAATGCAAACTATAC TATAGCTGCAAGAGGCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGAAAGCAATGTCC AAAACCCATACAAAGCAAATGGATATTATAAGCACAAAAACAACATAACAAAGACACACA AAAACACACACACACACACAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAAGGGAA GATTAGATGGAATACATAGAAGAGTACTAGGAAAGCGACACAATCAATGGTTGTTGGCTA ATGCTGTCTCAACAACTGAATCAATCCGAAAAATGATAAAAAAGTAAGCGAAGAAAGGAA AACAAAATGGGTTATTATTATAATTAGCGAGGGCTGGAAACAGAGGGAATTAAAATTAAA ATCTATTCCGAGAAGAGAAGGTGACTGTATTCGGTAAAAAAGCGTAATGCGAGAAGAATG CAAAAATAAAACCAACAATACATTGGAAATT



consensusID : consensus_8191#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 416
fasta sequence
                              [TCTCTCTCTCTCTCTTCCATTTTCCGCAAAACCATCGGAACGGAATGTTAATTGTTGTCGGCAATCGTTTATGTACGAAGGGCTGGTGTCCATGTGTGTGAGAGTGTGTGTGTGTATGTGTGTATGTTTATGATAGAAAGTATGAGGTATTGGAAGAGGAAGAGTACTAGGAAAGCGACACAATCAATGGTTGTTGGCTAATGCTGTCTCAATAACTGAATCAATCCGAAAAATGATAAAAAAGTAAGCGAAGAAAGGAAAACAAAATGGGTTATTATTATAATTAGCGAGGGCTGGAAACAGAGGGAATTAAAATTAAAATCTATTCCGAGAAGAGAAGGTGACTGTATTCGGTAAAAAAGCGTAATGCGAGAAGAATGCAAAAATAAAACCAACAATACATTGGAAATTATTCA]

[+] EMBL BX608365             [TCTCTCTCTCTCTCTTCCATTTTCCGCAAAACCATCGGAACGGAATGTTAATTGTTGTCGGCAATCGTTTATGTACGAAGGGCTGGTGTCCATGTGTGTGAGAGTGTGTGTGTGTATGTGTGTATGTTTATGATAGAAAGTATGAGGTATTGGAAGAGGAAGAGTACTAGGAAAGCGACACAATCAATGGTTGTTGGCTAATGCTGTCTCAATAACTGAATCAATCCGAAAAATGATAAAAAAGTAAGCGAAGAAAGGAAAACAAAATGGGTTATTATTATAATTAGCGAGGGCTGGAAACAGAGGGAATTAAAATTAAAATCTATTCCGAGAAGAGAAGGTGACTGTATTCGGTAAAAAAGCGTAATGCGAGAAGAATGCAAAAATAAAACCAACAATACATTGGAAATTATTCA]


>consensus_8191#7 TCTCTCTCTCTCTCTTCCATTTTCCGCAAAACCATCGGAACGGAATGTTAATTGTTGTCG GCAATCGTTTATGTACGAAGGGCTGGTGTCCATGTGTGTGAGAGTGTGTGTGTGTATGTG TGTATGTTTATGATAGAAAGTATGAGGTATTGGAAGAGGAAGAGTACTAGGAAAGCGACA CAATCAATGGTTGTTGGCTAATGCTGTCTCAATAACTGAATCAATCCGAAAAATGATAAA AAAGTAAGCGAAGAAAGGAAAACAAAATGGGTTATTATTATAATTAGCGAGGGCTGGAAA CAGAGGGAATTAAAATTAAAATCTATTCCGAGAAGAGAAGGTGACTGTATTCGGTAAAAA AGCGTAATGCGAGAAGAATGCAAAAATAAAACCAACAATACATTGGAAATTATTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8191#6      ------------------------------------------------GTTTCCTTGCAC 12
consensus_8191#7      ------------------------------------------------------------
consensus_8191#3      -----------CCGCAAAACTTTTATCCAAAAACAAACAAAAAAAACCGGGCCATAGCCA 49
consensus_8191#5      -------------------------ACAAAAAAAAAACAACAAAAACCGGGCCATAGCCA 35
consensus_8191#1      ------------------------------AATCCCCCGNCGGTTAATGTGACATTGGTA 30
consensus_8191#0      CCGGCGCCAAATGTACGCAAACAAATAGAACCATTCGCATTCGCGCAAAAATGTGCAAAA 60
consensus_8191#2      ------------------------------------------------------------
consensus_8191#4      -----------------------------------------------------------A 1
                                                                                  

consensus_8191#6      AAACAATGCAAGTGGCTAGAGAAGAGAGAAGAAAGAGAAAGAAAACACGGTAATATAAGT 72
consensus_8191#7      ------------------------------------------------------------
consensus_8191#3      TCAGAATGCCACTAGTTAAAATATATTTATAAAATAAAAGTAACTACTTACGCGATCGTA 109
consensus_8191#5      TCAGAATGCCACTAGTTAAAATATATTTATAAAATAAAATTAACTACTTACGCGATCGTA 95
consensus_8191#1      T-AGAAT---AGTAAGGAACGTTCTTATCAAAATCATATCCAGCTGCCAATGGAATGGTA 86
consensus_8191#0      ATAATATGGAAACGGCAAACAACAATTGCCGGCAACAATTAACATTCCGTTACGATGGTT 120
consensus_8191#2      --AATATGGAAACAGCAAACAACAATTGCCGACAACAATTAACATTCCGTTCCGATGGTT 58
consensus_8191#4      GCAAAAAAAAAACAACAACAAAACTATAGCAAAAATAAATAAATAAGAAACAAAAAGAAA 61
                                                                                  

consensus_8191#6      CAAGTATAATCTCAAGAGCGTCTGTG-------AATTGTGAAATGCAAACTATACT---- 121
consensus_8191#7      ------------------------------------------------------------
consensus_8191#3      CAGGCGAACACACACACACGCACACA----------CAGCAGATCAGAAGGACCCCAGTA 159
consensus_8191#5      CAGACGAACACACACAGACACACACAGGCACACAAACAACAGATCAGCAGAACACC-GCA 154
consensus_8191#1      -AAGCGGTTAGGGGAGAGAAAATCTA---------ACACAAGGTCTTTCCGATCTC---- 132
consensus_8191#0      TTGCGGAAAATGGAAGAGAGAGAGAGAGAGA--GAGAGAGAGAGAGAGAGAGAGAGAGAG 178
consensus_8191#2      TTGCGGAAAATGGAAGA--------------------------------GAGAGAGAGAG 86
consensus_8191#4      CACAAAACATATTTATATTGTTCCAGTGCATTGGGTTTTGTTTTGATAGTGATAACACAA 121
                                                                                  

consensus_8191#6      ----ATAGCTGCAAGAGGCAACAAGAAGCAT-GTGGTACTCCCCCCCCCCAGAAAGCAAT 176
consensus_8191#7      ---------------------------------------TCTCTCTCTCTCTCTTCCATT 21
consensus_8191#3      GGATGGATGGAGAAAAAGGCTCGCGAAGCGT-GCGCCACCGTTTCCTTGCACAAGCAATG 218
consensus_8191#5      G--TAGATGCAGAAAAAGGCTAGCGAAGCGT-GCGCCACCGTTTCCTTGCACAAACAATG 211
consensus_8191#1      ------ATAGAGCAAAACAGTAGCAGAATGA-AGG--ACCGATTTAATAACGCAGCAGAG 183
consensus_8191#0      AGAGAGAAGGAAAAAGGATGAAATGAAATAA-GTTAGGAAAGTAGACGGTAAAGGTAAAG 237
consensus_8191#2      ATAGAGAAGGAAAAAAGATGAAATGAAATAA-GTTAGGAAAGTAGACGGTAAACGCAAAG 145
consensus_8191#4      A--CAGAAGCAAAACAGAAGAAGCAACATAGCATGAGATTAATTTTCCACTAAAACCACT 179
                                                                                  

consensus_8191#6      GTCCA-AAACCCATACAAAGCA---AATGGATATTATAAGCACAAAAACAACA--TAACA 230
consensus_8191#7      TTCCGCAAAACCATCGGAACGG---AATGTTAATTGTTGTC--GGCAATCGTT--TATGT 74
consensus_8191#3      CACGTGGCTAGAGAAAAGAGAA---AGAGAAGA--GAAAACACGGTAAT-TAA--TAAGT 270
consensus_8191#5      CAAGTGGCTAGAGAAGAGAGAA---GAAAGAGAAAGAAAACACGGTAATATAAGTCAAGT 268
consensus_8191#1      ATGCTGGATTGCGTACGTACGC---GCATGATACTCTTTA-GTGGTGGTGGTAGCCGAGC 239
consensus_8191#0      CTGCA-TTTTAAAGAAAGAGAG---AAAAAAAACGCAAAACGCATGTTGTGAAATGAAAC 293
consensus_8191#2      CTGCA-TTTTAAAGAAAGAGA----AAAAAAAACGCAAAACGCATGTTGTGAAATGAAAC 200
consensus_8191#4      TTGTG-TACTGTGTTAGGACATTTTAATATGAACGAAAATTGTAGAACTGTGACAAGGAG 238
                                        *             *                           

consensus_8191#6      AAGACACACAAAAACACACACACACACACAAAGCAAAA---------------------C 269
consensus_8191#7      ACGAAGGGCTGGTGTCCATGTGTGTG-AGAGTGTGTGT---------------------G 112
consensus_8191#3      T--ATCTCAAGAGCGTCAGTGAATTGTGAAATGCACACGCGGGCAACATTGAATCTAAAC 328
consensus_8191#5      ATAATCTCAAGAGCGTCTGTGAATTGTGAAATGCAAAC-----------------TATAC 311
consensus_8191#1      A-------ATGTGTGCCGTTACTTCCCGGATAGTAAGC--------------------GG 272
consensus_8191#0      AAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCAAATG--TGGCAAGGCAAATG 351
consensus_8191#2      AAAACGAAACACGAAGAAGAGTAAGTAAAACCGCCAGTCAGGGGA-CAGAAAGGCAAATG 259
consensus_8191#4      GGGGAGTAAGATGAAAAAAAGAAGAAGAAAGAAGAAGA-------------------AAA 279
                                                   *                              

consensus_8191#6      AGTTACTGTTAAGG-AAGGCGACGGAAGGGAAGATTAGATGGA-ATACATAGAAGAGTAC 327
consensus_8191#7      TGTATGTGTGTATG-TTTATGATAGAAAGTATGAGGTATTGGA-AGA---GGAAGAGTAC 167
consensus_8191#3      TATAGCTGCAAGAACAATGCAACAAGAAACATGCGGAACTCCCCCCGC--AGGAAGCAAT 386
consensus_8191#5      TATAGCTGCAAGAG----GCAACAAGAAGCATGTGGTACTCCCCCCCCCCAGAAAGCAAT 367
consensus_8191#1      CATGGTGGTGTGAA----GCAAGCAGACACAAAAGAAATG----AAGCAAAGTAAGATAT 324
consensus_8191#0      TGTAATTCTAAATG----TATACAAAGCATAAATAATATTAAATACAC-TA---TAACGT 403
consensus_8191#2      TGTAATTCTAAATG----TATACAAAGCATAAATAATATTAAATACAC-TACACTAACGT 314
consensus_8191#4      AACAACCACAGAAA--ACACAACATAAAACAAGTAAAAGTAACGAAAAAAAAAAAAAGAT 337
                                           *        *                             

consensus_8191#6      TAGGAAAGCGACACAATCAATGGTTGTTGGCTAATGCTGTCTCAACAACTGAATCAATCC 387
consensus_8191#7      TAGGAAAGCGACACAATCAATGGTTGTTGGCTAATGCTGTCTCAATAACTGAATCAATCC 227
consensus_8191#3      GTCCAAAACCGAGCAA--AAGAAAGTCAGATTCGAATCATAGAGCGAACTGTAGCTGTAT 444
consensus_8191#5      GTCCAAAACCGAGCAA--AAGAAAGTCAGATTCGAA-CATAGAGCGAACTATAGCTGCAT 424
consensus_8191#1      AAAGCACGCAAAGCAA--AACAA--TCTTATTCGAA-CATAGAGCGAACTATAGCTGCAT 379
consensus_8191#0      ACACAAAAACACACAAACACACAC--TTGCGCCGTATCGGAATAGTAGGGCACTTCTCAG 461
consensus_8191#2      ACACAAAAACACACAAACACACACACTTGCGCCGTATCGGAATAGTAGGGCACTTTACAG 374
consensus_8191#4      TAGCAAAAACCCATACAAAGCAAATGGATATTATAAGCACAAAAACAACATAACAAAGAC 397
                           *        *   *                           *             

consensus_8191#6      GAAAAATGATAAAAAAGTAAGCGAAG----AAAGGAAAACAAAAT------GGGTTATTA 437
consensus_8191#7      GAAAAATGATAAAAAAGTAAGCGAAG----AAAGGAAAACAAAAT------GGGTTATTA 277
consensus_8191#3      GA-TGATGATAGGCAGGCAAAAAAGA----ATGGAAAAACTGGATTCAA-AGTGACAGGA 498
consensus_8191#5      GA-TGATGATAGGCAGGCAAAAAAGA----AAGGAAAAACTGGATTAAA-AGGGACAGGA 478
consensus_8191#1      GACTGATGATAGGCAGGCAAAAAACGCAACACGGNNAAACTGGATTCAACAGGGACAGGA 439
consensus_8191#0      CAAAAAAACCAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACG--GATTGGTTTTGTT 519
consensus_8191#2      TAAAAAA--CAGGAAAGCCAATTAAGACAAAGATTTGTGCAAACGTGGATTGGTTTTGTT 432
consensus_8191#4      ACACAAAAACACACACACACACACAAAGCAAAACAGTTACTGTTAAGGAAGGCGACGGAA 457
                           *    *   *               *        *           *        

consensus_8191#6      TTAT-AATTAG---CGA--GGGCTGGAAACAGA-------GGGAATTAAAATTAAAATCT 484
consensus_8191#7      TTAT-AATTAG---CGA--GGGCTGGAAACAGA-------GGGAATTAAAATTAAAATCT 324
consensus_8191#3      ACATCGATTCGAATCAA--GCGTTCGCAACTAC-------TAGAGCAAAGAGAAAGGAAC 549
consensus_8191#5      ACATCGATTCGAATCAA--GCGTTCGCAACTAC-------TAGAGCAAAGAGAAAGGAAC 529
consensus_8191#1      ACATCGATTCGAATCAA--GCGTTCGCAACTAC-------TAGAGCAAAGAGAAAGGAAC 490
consensus_8191#0      TCGT-TGCAGGCCCCTATTTTGTCCCCCCCCCCCCCCCTCTCCCCTTATTTTCAAATGGC 578
consensus_8191#2      TCGT-GGTCAGC--CTATTATGTCCCCCCCCCC-------TCCCCTTATTTTCAAATGGC 482
consensus_8191#4      GGGAAGATTAGATGGAA---TACATAGAAGAGAAGAAGCAGCAGTGAAGCAGAACAGTAC 514
                                *     *                              *     *      

consensus_8191#6      AT-TC-CGAGAAGAGAAGGTGACTGTATTCGGTAAAA--AAGCGTAATGCGAGAAGAATG 540
consensus_8191#7      AT-TC-CGAGAAGAGAAGGTGACTGTATTCGGTAAAA--AAGCGTAATGCGAGAAGAATG 380
consensus_8191#3      ACATC-CGAGATTAAACGATGCGTGTAATGCATAAACTTAAGCTTCA-GCGGTAACAAAA 607
consensus_8191#5      ACAAC-CGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCA-GCGGTAACAAAA 587
consensus_8191#1      ACAAC-CGAGAATAAACGATGCGTGTAATGCATAAACTTAAGCTTCA-GCGGTAACAAAA 548
consensus_8191#0      ACTTTGCAACATGCATCTCTTTGAGCAAAGAG-AAATGGTTATTTATTGCGGTTAGCCTG 637
consensus_8191#2      ACTTTGCAACATGCATCTCTTTGCGCAAAGAG-AAATGGTTATTTATTGCGGTTAGCCTG 541
consensus_8191#4      ACAGAGAGCGGTAAAATGCGTAATACAACAAGGTGACATATGTATCGTTTCGTCATAACT 574
                      *                         *        *        *         *     

consensus_8191#6      CAAAAATAAAACCAACAATACATTGGAAATT----------------------------- 571
consensus_8191#7      CAAAAATAAAACCAACAATACATTGGAAATTATTCA------------------------ 416
consensus_8191#3      CGAAAACGAAAGC----------------------------------------------- 620
consensus_8191#5      CGA--------------------------------------------------------- 590
consensus_8191#1      CGAAAACGAAAGCAACAAAAAAACAACAACAAAACTATAGCAAAACTANATAAATAAGAA 608
consensus_8191#0      ATACAACTACACTTAAGATACGATTTATGTTT---------------------------- 669
consensus_8191#2      ATACAACTACACTTAAGATACGATTTATGTTTTTTTTATTATTATTTTTATGGGNTTCAA 601
consensus_8191#4      TTAAACGAGGAAAAACAAAAAGACAGAAAATAAAC------------------------- 609
                        *                                                         

consensus_8191#6      ----------------------------
consensus_8191#7      ----------------------------
consensus_8191#3      ----------------------------
consensus_8191#5      ----------------------------
consensus_8191#1      ACAAAAANACACACCCACCCACACACNC 636
consensus_8191#0      ----------------------------
consensus_8191#2      TAAAGTGCAAATTCATTCATC------- 622
consensus_8191#4      ----------------------------
                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)