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Anopheles gambiae
cluster # 8219 cluster # 8219       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8219#0 length = 1568 sequences # 7  
consensus_8219#1 length = 1333 sequences # 1  
consensus_8219#2 length = 217 sequences # 1  

consensusID : consensus_8219#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1568
fasta sequence
                              [GGGGCTCAACACCGAGAGACGCGCCAGCACGCACGAGCCNTGGTGCCAGCNCGGGGTGGGCTATAGCGCGCTGTGTTAGCCGCGGGAGNCATGTGCCAGGCCAAGAATTCGGGCACGAGGGCCATTNACGGCGGGTGGCACCAACAAATTCGGCGTTTTAATTTGCCACGAGTGTGAACAATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAAATCACACCCTCTTCCTGGATGCAGCTATTCTAGTGGCGGTTGAGAAACAATCGCGATCTCCCCGGTACCATCCGTACTCCCCAACCGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAACGAAGAAAAAGTTTCTCCGGTCTGCATCCGGCGTGGCGCGTGTACGTGATCCTGCTCGGCCTGCTGGTGCTGTACAACGAGGTGCTAATTTATGTGTTGCAAAAGTTCAAGTGGTCAAATATTTATTGTAAA-GAAGCTGACTGTGTAAGGATTTTGCT-TGTAG-CG-GATCCACAGATTCTGGGCAAAACGTTCGACACGCACTTCTATGCC-GGGTTGGCCAACTATGACTCGGA-CCGTTACCTGGCCTGGTACTACGAGCAGGC-GGTCGAGCATGTGC-AGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGAC-GAGGGCACGGATTC-GACCGAGATGCACTTCGAGGAGTACTACACACGC-TTCGGAGCGATCTTTCCCACTCA--TCCGACCGCAAGGTCGATCTACATACCGGGCGATAACGATAT-CGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAGCGGCGGTTCCGTCAGTACTTCTCCGAGCGTCCGGCATGGGTGATTAACGACAATCTCACGATTTACAACATCAATCGGATAACGCTGGAAATGACGTTGAACGATCCGCGCATGGTGGACAGCACTGGGTCGGACGTTTCCGATCGCTACCTGCGGATATTCGTCAGCCATATGCCGGTGCTGGATGTGCCGTCCAGCTTCACCTACACGGCGATACACAACCTGAAGCCGAACGTGATCTTTTCGGCCCATCTGCACGTGTCGCAGTTCGCGCGCATACACCGCAGCCGGCTGAAAACGGTCCAGTATAAGCCGCTGAGCCAGGACAAGCGTACGGCGTACAAGGTGCATTCGTTCGATCTGAGCTACCATCAGGATACGCAGGAGCTGCTGGAAATCATCGTCCCGACGTGCTCGTACCGGATGAGTGTACCGGACATTGGGTACGGTTATGCGGCCATTGATGGCACCACACTGAAGTACACCGTGCTGTGGACGACACGGCGCTTCTATCAACTGATCTCGTACGTGGTGATGTTTGCCGTACCGTTTGGGCTGGGTGTGCTGTATCTTCTGGTCAAATTTGTACGCGAACACTGCACCTGTCGGCCACGGTATGAACGTTTGCCGAAGTAACACCCGGACCGGTAAGGTAGGCAGGTAGGTAGGCGGCTCGTGTACTTGTGCAATTATGTGGCGAGGCAGTTAGCGAATAAATTATGAACGTGAAGCAATGTTTTTCTACAAACAGTAAAAAAAA]

[+] EMBL BX466343             [GGGGCTCAACACCGAGAGACGCGCCAGCACGCACGAGCCNTGGTGCCAGCNCGGGGTGGGCTATAGCGCGCTGTGTTAGCCGCGGGAGNCATGTGCCAGGCCAAGAATTCGGGCACGAGGGCCATTNACGGCGGGTGGCACCAACAAATTCGGCGTTTTAATTTGCCACGAGTGTGAACAATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAAATCACACCCTCTTCCTGGATGCAGCTATTCTAGTGGCGGTTGAGAAACAATCGCGATCTCCCCGGTACCATCCGTACTCCCCAACCGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAACGAAGAAAAAGTTTCTCCGGTCTGCATCCGGCGTGGCGCGTGTACGTGATCCTGCTCGGCCTGCTGGTGCTGTACAACGAGGTGCTAATTTATGTGTTGCAAAAGTTCAAGTGGTCAAATATTTATTGTAAATGAAGCTGACTGTGTAAGGATTTTGCT TGTAG CG GATCCACAGATTCTGGGCAAAACGTTCGACACGCACTTCTATGCC GGGTTGGCCAACTATGACTCGGACCCGTTACCTGGCCTGGTACTACGAGCAGGCGGGTCGAGCATGTGCAAGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGACAGAGGGCACGGATTCGGACCGAGATGCACTTCGAGGAGTACTACACACGCTTTCGGAGCGATCTTTCCCACTCAATTCGGACCGC ANGTCGATCTACATACCGGGCGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM651611             [                                                                                                                                                                                                                                                                                                                                                                                                CGTGATCCTGCTCGGCCTGCTGGTGCTGTACAACGAGGTGCTAATTTATGTGTTGCAAAAGTTCAAGTGGTCAAATATTTATTGCAAA GAAGCTGACTGTGTAAGGATTTTGCT TGTAG CG GATCCACAGATTCTGGGCAAAACGTTCGACACACACTTCTATGCC GGGTTGGCCAACTATGACTCGGA CCGTTACCTGGCCTGGTACTACGAGCAGGC GGTCGAGCATGTGC AGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGAC GAGGGCACGGATTC AACCGAGATGCACTTCGAGGAATACTACACACGC TTCGGAGCGATCTTTCCCACTCA  TCCGACCGCGAGGTCGATCTACATACCGGGCGATAACGATATCCGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAGCGGGGGTTCCGTCAGTACTTCTCCGAGCGTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AGA284787            [                                                                                                                                                                                                                                                                                                                                                                                                CGTGATCCTGCTCGGCCTGCTGGTGCTGTACAACGAGGTGCTAATTTATGTGTTGCAAAAGTTCAAGTGGTCAAATATTTATTGTAAA GAAGCTGACTGTGTAAGGATTTTGCT TGTAG CG GATCCACAGATTCTGGGCAAAACGTTCGACACGCACTTCTATGCCGGGGTTGG CAACTATGACTCGGG CCGTTACCTGGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX624224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cTTGCTNNGTAGACGAGATCCACAGATTCTGGGCAAAACGTTCGACACGCACTTCTATGCC GGGTTGGCCAACTATGACTCGGA CCGTTACCTGGCCTGGTACTACGAGCAGGC GGTCGAGCATGTGC AGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGAC GAGGGCACGGATTC GACCGAGATGCACTTCGAGGAGTACTACACACGC TTCGGAGCGATCTTTCCCACTCA  TCCGACCGCAAGGTCGATCTACATACCGGGCGATAACGATAT CGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAGCGGCGGTTCCGTCAGTACTTCTCCGAGCGTCCGGCATGGGTGATTAACGACAATCTCACGATTTACAACATCAATCGGATAACGCTGGAAATGACGTTGAACGATCCGCGCATGGTGGACAGCACTGGGTCGGACGTTTCCGATCGCTACCTGCGGATATTCGTCAGCCATATGCCGGTGCTGGATGTGCCGTCCAGCTTCACCTACACNGCGATACACAACCTGANGCCGAACGTGATCNNTTCGGCCCATCTGCACGTGTCGCAGTTCGCGCGCATACACCGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX622690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCACAGATTCTGGGCAAAACGTTCGACACGCACTTCTATGCC GGGTTGGCCAACTATGACTCGGA CCGTTACCTGGCCTGGTACTACGAGCAGGC GGTCGAGCATGTGC AGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGAC GAGGGCACGTATTC GACCGAGATGCACTTCGAGGAGTACTACACACGC TTCGGAGCGATCTTTCCCACTCA  TCCGACCGCAAGGTCGATCTACATACCGGGCGATAACGATAT CGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAGCGGCGGTTCCGTCAGTACTTCTCCGAGCGTCCGGCATGGGTGATTAACGACAATCTCACGATTTACAACATCAATCGGATAACGCTGGAAATGACGTTGAACGATCCGCGCATGGTGGACAGCACTGGGTCGGACGTTTCCGATCGCTACCTGCGGATATTCGTCAGCCATATGCCGGTGCTGGATGTGCCGTCCAGCTTCACCTACACGGCGATACACAACCTGAAGCCGAACGTGATCTTTTCGGCCCATCTGCACGTGTCGCAGTTCGCGCGCATACACCGCAGCCGGCTGAAAACGGTCCAGTATAAGCCGCTGAGCCAGGACAAGCGTACGGCGTACAAGGTGCATTCGTTCGATCTGAGCTACCATCAGGATACGCAGGAGCTGCTGGAAATCATCGTCCCGACGTGCTCGTACCGGATGAGTGTACCGGACATTGGGTACGGGTATGCGGNCATTGATGGCACCACACTGAAGTACACCGTGCTGTGGACGACACGGCGCTTCTATCAACTGATCTCGTACGTGGNGAT                                                                                                                                                                                                                                ]
[+] EMBL BX618298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTGGCCAACTATGACTCGGA CCGTTACCTGGCCTGGTACTACGAGCAGGC GGTCGAGCATGTGC AGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGAC GAGGGCACGGATTC GACCGAGATGCACTTCGAGGAGTACTACACACGC TTCGGAGCGATCTTTCCCACTCA  TCCGACCGCAAGGTCGATCTACATACCGGGCGATAACGATAT CGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAGCGGCGGTTCCGTCAGTACTTCTCCGAGCGTCCGGCATGGGTGATTAACGACAATCTCACGATTTACAACATCAATCGGATAACGCTGGAAATGACGTTGAACGATCCGCGCATGGTGGACAGCACTGGGTCGGACGTTTCCGATCGCTACCTGCGGATATTCGTCAGCCATATGCCGGTGCTGGATGTGCCGTCCAGCTTCACCTACACGGCGATACACAACCTGAAGCCGAACGTGATCTTTTCGGCCCATCTGCACGTGTCGCAGTTCGCGCGCATACACCGCAGCCGGCTGAAAACGGTCCAGTATAAGCCGCTGAGCCAGGACAAGCGTACGGCGTACAAGGTGCATTCGTTCGATCTGAGCTACCATCAGGATACGCAGGAGCTGCTGGAAATCATCGTCCCGACGTGCTCGTACCGGATGAGTGTACCGGACATTGGGTACGGTTATGCGGCCATTGATGGCACCACACTGAAGTACACCGTGCTGTGGACGACACGGCGCTTCTATCAACTGATCTCGTACGTGGTGATGTTTGCCGTACCGTTTGGGCTGGGTGTGCTGTATCTTCTGGTCAAATTTGTACGCGAACACTGC                                                                                                                                                                ]
[-] EMBL AGA283492            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAGTATAAGCCGCTGAGCCAGGACAAGCGTACGGCGTACAAGGTGCATTCGTTCGATCTGAGCTACCATCAGGATACGCAGGAGCTGCTGGAAATCATCGTCCCGACGTGCTCGTACCGGATGAGTGTACCGGACATTGGGTACGGTTATGCGGCCATTGATGGCACCACACTGAAGTACACCGTGCTGTGGACGACACGGCGCTTCTATCAACTGATCTCGTACGTGGTGATGTTTGCCGTACCGTTTGGGCTGGGTGTGCTGTATCTTCTGGTCAAATTTGTACGCGAACACTGCACCTGTCGGCCACGGTATGAACGTTTGCCGAAGTAACACCCGGACCGGTAAGGTAGGCAGGTAGGTAGGCGGCTCGTGTACTTGTGCAATTATGTGGCGAGGCAGTTAGCGAATAAATTATGAACGTGAAGCAATGTTTTTCTACAAACAGTAAAAAAAA]


>consensus_8219#0 GGGGCTCAACACCGAGAGACGCGCCAGCACGCACGAGCCNTGGTGCCAGCNCGGGGTGGG CTATAGCGCGCTGTGTTAGCCGCGGGAGNCATGTGCCAGGCCAAGAATTCGGGCACGAGG GCCATTNACGGCGGGTGGCACCAACAAATTCGGCGTTTTAATTTGCCACGAGTGTGAACA ATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAAATCACACCCTCTTCCTGGATGCAGC TATTCTAGTGGCGGTTGAGAAACAATCGCGATCTCCCCGGTACCATCCGTACTCCCCAAC CGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAACGAAGAAAAAGTTTCTCCGG TCTGCATCCGGCGTGGCGCGTGTACGTGATCCTGCTCGGCCTGCTGGTGCTGTACAACGA GGTGCTAATTTATGTGTTGCAAAAGTTCAAGTGGTCAAATATTTATTGTAAAGAAGCTGA CTGTGTAAGGATTTTGCTTGTAGCGGATCCACAGATTCTGGGCAAAACGTTCGACACGCA CTTCTATGCCGGGTTGGCCAACTATGACTCGGACCGTTACCTGGCCTGGTACTACGAGCA GGCGGTCGAGCATGTGCAGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGACGAGGG CACGGATTCGACCGAGATGCACTTCGAGGAGTACTACACACGCTTCGGAGCGATCTTTCC CACTCATCCGACCGCAAGGTCGATCTACATACCGGGCGATAACGATATCGGCGGTGAGGG TCGGCAGCCGCTGAATCCGATTGCGAAGCGGCGGTTCCGTCAGTACTTCTCCGAGCGTCC GGCATGGGTGATTAACGACAATCTCACGATTTACAACATCAATCGGATAACGCTGGAAAT GACGTTGAACGATCCGCGCATGGTGGACAGCACTGGGTCGGACGTTTCCGATCGCTACCT GCGGATATTCGTCAGCCATATGCCGGTGCTGGATGTGCCGTCCAGCTTCACCTACACGGC GATACACAACCTGAAGCCGAACGTGATCTTTTCGGCCCATCTGCACGTGTCGCAGTTCGC GCGCATACACCGCAGCCGGCTGAAAACGGTCCAGTATAAGCCGCTGAGCCAGGACAAGCG TACGGCGTACAAGGTGCATTCGTTCGATCTGAGCTACCATCAGGATACGCAGGAGCTGCT GGAAATCATCGTCCCGACGTGCTCGTACCGGATGAGTGTACCGGACATTGGGTACGGTTA TGCGGCCATTGATGGCACCACACTGAAGTACACCGTGCTGTGGACGACACGGCGCTTCTA TCAACTGATCTCGTACGTGGTGATGTTTGCCGTACCGTTTGGGCTGGGTGTGCTGTATCT TCTGGTCAAATTTGTACGCGAACACTGCACCTGTCGGCCACGGTATGAACGTTTGCCGAA GTAACACCCGGACCGGTAAGGTAGGCAGGTAGGTAGGCGGCTCGTGTACTTGTGCAATTA TGTGGCGAGGCAGTTAGCGAATAAATTATGAACGTGAAGCAATGTTTTTCTACAAACAGT AAAAAAAA



consensusID : consensus_8219#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1333
fasta sequence
                              [CAAGAATCCCCGAGTGTTTAACTGTTACTANCCTGGTACTACGAGCAGGCAGTCTGAGCATAGTAGCAGCCGGATGTAGATCCATCTTTCTATGGCGATCTGATGGACGAGGGCACTGGATTCAACTGAGATGCACTATCGAGGAGTACTACACACTGCTATCGGAGCTGATCTTTCCCACTCATTCCGACCGCAAGGTCGATCTACATACCGGGCGATAATGATATCGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAAGCGGCGGTTCCGTCAGTACTATNCTACCGAGCGTNCGGCATTGGGTTGATTCAACTGACAATCTACACGATTTACAATCATCAATTCTGGATAACTGCGTGGACCNCATTGACCGTTGCANACGGATACCGGGCCATTGGNTGGGACANGCAACCTGGGTNCGGGACGTTTTCCGAATCAGCTACCCTGGCGGGCACTTANTTTCCGTCCGAGGGCCAATAATTGGNCCCTGGGTGGGCGTGGGAGTTGTTTGAACCGTTNCCAAGGACCTTNGCAACGCCTTAAACGACTGGGCGTGNCACTACCNACAAAACCCTTTGCAAAGCCCTGAAACGGTTTTGGANTTCCNTATATAATCCGGGAAACCCCNATTCCTTGGGCCAACCGGCTAGACTTCCCANNCNCCAAAGNCGCGTGCCTACAAGGCCGTNCTGAGTTAAACAAAGCCCTGGCTGCTAAAAACACAGTGACCCTTGGACACANNTACTCGTGGTCNCCCCAAAGGGGCATACTTTNNTGNAGGTGNCCCGAGGGGGCACTTGTGATAATACGTCCCCCCNAAAGTATGGTGAAGCGAAAACAGCNCCCGTGGGTTAACCCCNGCAGTGTCNCTNTACCTAATCGCCCAAAAAAGGCGCGCTTTGTAGNCGTACCNTTTCGCCGCNCGATTCCNGGGGCGCGTANACCTTTNGTAANAGCGCTTATACTNGCCCACTTTCCACAACAGGGGGNGCCAAAACTTATATAACCCGGCGCNGNCANCGTGGGAAAAANAGACCCCCCCCTANGGACAACCCTTCGTNGTGGNTATAGACGAAACACCGATTCCCAAAAAGTTTACCACGGTGGGGTTATGTACGCCACTGNAGTACNACTAGGCCTTTNTGAGGGCCGCATCCCCCNCGGCGTAAAANACCACCCGGGNGGGCGNCACAAATTTNGTTTATAGAAGCTATTGGGGCNTGANAACCACACCNGAGGGCGACGTAAGCCGCACAGATTNGCATGTAGTNGTTTGCAGACTATCATCAACCAGNCGCGGACGTGAAGGAANATANAACAGCGT]

[+] EMBL AL694049             [CAAGAATCCCCGAGTGTTTAACTGTTACTANCCTGGTACTACGAGCAGGCAGTCTGAGCATAGTAGCAGCCGGATGTAGATCCATCTTTCTATGGCGATCTGATGGACGAGGGCACTGGATTCAACTGAGATGCACTATCGAGGAGTACTACACACTGCTATCGGAGCTGATCTTTCCCACTCATTCCGACCGCAAGGTCGATCTACATACCGGGCGATAATGATATCGGCGGTGAGGGTCGGCAGCCGCTGAATCCGATTGCGAAAGCGGCGGTTCCGTCAGTACTATNCTACCGAGCGTNCGGCATTGGGTTGATTCAACTGACAATCTACACGATTTACAATCATCAATTCTGGATAACTGCGTGGACCNCATTGACCGTTGCANACGGATACCGGGCCATTGGNTGGGACANGCAACCTGGGTNCGGGACGTTTTCCGAATCAGCTACCCTGGCGGGCACTTANTTTCCGTCCGAGGGCCAATAATTGGNCCCTGGGTGGGCGTGGGAGTTGTTTGAACCGTTNCCAAGGACCTTNGCAACGCCTTAAACGACTGGGCGTGNCACTACCNACAAAACCCTTTGCAAAGCCCTGAAACGGTTTTGGANTTCCNTATATAATCCGGGAAACCCCNATTCCTTGGGCCAACCGGCTAGACTTCCCANNCNCCAAAGNCGCGTGCCTACAAGGCCGTNCTGAGTTAAACAAAGCCCTGGCTGCTAAAAACACAGTGACCCTTGGACACANNTACTCGTGGTCNCCCCAAAGGGGCATACTTTNNTGNAGGTGNCCCGAGGGGGCACTTGTGATAATACGTCCCCCCNAAAGTATGGTGAAGCGAAAACAGCNCCCGTGGGTTAACCCCNGCAGTGTCNCTNTACCTAATCGCCCAAAAAAGGCGCGCTTTGTAGNCGTACCNTTTCGCCGCNCGATTCCNGGGGCGCGTANACCTTTNGTAANAGCGCTTATACTNGCCCACTTTCCACAACAGGGGGNGCCAAAACTTATATAACCCGGCGCNGNCANCGTGGGAAAAANAGACCCCCCCCTANGGACAACCCTTCGTNGTGGNTATAGACGAAACACCGATTCCCAAAAAGTTTACCACGGTGGGGTTATGTACGCCACTGNAGTACNACTAGGCCTTTNTGAGGGCCGCATCCCCCNCGGCGTAAAANACCACCCGGGNGGGCGNCACAAATTTNGTTTATAGAAGCTATTGGGGCNTGANAACCACACCNGAGGGCGACGTAAGCCGCACAGATTNGCATGTAGTNGTTTGCAGACTATCATCAACCAGNCGCGGACGTGAAGGAANATANAACAGCGT]


>consensus_8219#1 CAAGAATCCCCGAGTGTTTAACTGTTACTANCCTGGTACTACGAGCAGGCAGTCTGAGCA TAGTAGCAGCCGGATGTAGATCCATCTTTCTATGGCGATCTGATGGACGAGGGCACTGGA TTCAACTGAGATGCACTATCGAGGAGTACTACACACTGCTATCGGAGCTGATCTTTCCCA CTCATTCCGACCGCAAGGTCGATCTACATACCGGGCGATAATGATATCGGCGGTGAGGGT CGGCAGCCGCTGAATCCGATTGCGAAAGCGGCGGTTCCGTCAGTACTATNCTACCGAGCG TNCGGCATTGGGTTGATTCAACTGACAATCTACACGATTTACAATCATCAATTCTGGATA ACTGCGTGGACCNCATTGACCGTTGCANACGGATACCGGGCCATTGGNTGGGACANGCAA CCTGGGTNCGGGACGTTTTCCGAATCAGCTACCCTGGCGGGCACTTANTTTCCGTCCGAG GGCCAATAATTGGNCCCTGGGTGGGCGTGGGAGTTGTTTGAACCGTTNCCAAGGACCTTN GCAACGCCTTAAACGACTGGGCGTGNCACTACCNACAAAACCCTTTGCAAAGCCCTGAAA CGGTTTTGGANTTCCNTATATAATCCGGGAAACCCCNATTCCTTGGGCCAACCGGCTAGA CTTCCCANNCNCCAAAGNCGCGTGCCTACAAGGCCGTNCTGAGTTAAACAAAGCCCTGGC TGCTAAAAACACAGTGACCCTTGGACACANNTACTCGTGGTCNCCCCAAAGGGGCATACT TTNNTGNAGGTGNCCCGAGGGGGCACTTGTGATAATACGTCCCCCCNAAAGTATGGTGAA GCGAAAACAGCNCCCGTGGGTTAACCCCNGCAGTGTCNCTNTACCTAATCGCCCAAAAAA GGCGCGCTTTGTAGNCGTACCNTTTCGCCGCNCGATTCCNGGGGCGCGTANACCTTTNGT AANAGCGCTTATACTNGCCCACTTTCCACAACAGGGGGNGCCAAAACTTATATAACCCGG CGCNGNCANCGTGGGAAAAANAGACCCCCCCCTANGGACAACCCTTCGTNGTGGNTATAG ACGAAACACCGATTCCCAAAAAGTTTACCACGGTGGGGTTATGTACGCCACTGNAGTACN ACTAGGCCTTTNTGAGGGCCGCATCCCCCNCGGCGTAAAANACCACCCGGGNGGGCGNCA CAAATTTNGTTTATAGAAGCTATTGGGGCNTGANAACCACACCNGAGGGCGACGTAAGCC GCACAGATTNGCATGTAGTNGTTTGCAGACTATCATCAACCAGNCGCGGACGTGAAGGAA NATANAACAGCGT



consensusID : consensus_8219#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 217
fasta sequence
                              [ATCGGCACGAGGTGTACCGCGGTGGCACACAATCGCGTTAATGCCACGAGTGTGAACAATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAAATCACACCCTCTTCCTGGATGCAGCTATTCTAGGGCGGTTGAGAAACAATCGCGATCTCCCCGTACCATCCGTACTCCCCAACCGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAAC]

[+] EMBL BX469330             [ATCGGCACGAGGTGTACCGCGGTGGCACACAATCGCGTTAATGCCACGAGTGTGAACAATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAAATCACACCCTCTTCCTGGATGCAGCTATTCTAGGGCGGTTGAGAAACAATCGCGATCTCCCCGTACCATCCGTACTCCCCAACCGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAAC]


>consensus_8219#2 ATCGGCACGAGGTGTACCGCGGTGGCACACAATCGCGTTAATGCCACGAGTGTGAACAAT GTTGCCGCATAGCAGCTTCTAGCGCGTTACGAAATCACACCCTCTTCCTGGATGCAGCTA TTCTAGGGCGGTTGAGAAACAATCGCGATCTCCCCGTACCATCCGTACTCCCCAACCGTC CTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8219#0      GGGGCTCAACACCGAGAGACGCGCCAGCACGCACGAGCCNTGGTGCCAGCNCGGGGTGGG 60
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ------CAAGAATCCCCGAGTGTTTAACTGTTACTANCCT-GGTACTACGAGCAGGCAGT 53
                                                                                  

consensus_8219#0      CTATAGCGCGCTGTGTTAGCCGCGGGAGNCATGTGCCAGGCCAAGAATTCGGGCACGAGG 120
consensus_8219#2      ------------------------------------------------ATCGGCACGAGG 12
consensus_8219#1      CTGAGCATAGTAGCAGCCGGATGTAGATCCATCTTTCTATGGCGATCTGATGG-ACGAGG 112
                                                                         ** ******

consensus_8219#0      GCCATTNACGGCGGGTGGCACCAACAAATTCGGCGTTTTAATT--TGCCACGAGTGTGAA 178
consensus_8219#2      ----TGTACCGCGG-TGGCAC--ACAAT-----CGCGTTAAT----GCCACGAGTGTGAA 56
consensus_8219#1      GCACTGGATT-CAACTGAGATGCACTATCGAGGAGTACTACACACTGCTATCGGAGCTGA 171
                          *  *   *   **  *   ** *       *   **      ** *   * *   *

consensus_8219#0      CAATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAA-ATCACACCCTCTTCCTGGATGC 237
consensus_8219#2      CAATGTTGCCGCATAGCAGCTTCTAGCGCGTTACGAA-ATCACACCCTCTTCCTGGATGC 115
consensus_8219#1      TCTTTCCCACTCATTCCGACCGCAAGGTCGATCTACATACCGGGCGATAATGATATCGGC 231
                         *     * ***  *  *  * **  ** *    * * *   *  *  *  *    **

consensus_8219#0      AGCTATTCT-AGTGGCGGTTGAGAAACAATCGCGATCTCCCCGGTACCATCCGTACTCCC 296
consensus_8219#2      AGCTATTCT-AG-GGCGGTTGAGAAACAATCGCGATCTCCCCG-TACCATCCGTACTCCC 172
consensus_8219#1      GGTGAGGGTCGGCAGCCGCTGA-ATCCGATTGCGAAAGCGGCGGTTCCGTCAGTACTATN 290
                       *  *   *  *  ** * *** *  * ** ****   *  ** * ** ** *****   

consensus_8219#0      CAACCGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAACGAAGAAAAAGTTTCT 356
consensus_8219#2      CAACCGTCCTTCCTGCAAGATGGCAAAGAATTGGATGACTAGAAC--------------- 217
consensus_8219#1      CTACCGAGCGTNCGGCATTGGGTTGATTCAACTGACAATCTACACGATTTACAATCATCA 350
                      * ****  * * * ***    *   *   *   **  *     **               

consensus_8219#0      CCGGTCTGCATCCGGCGTGGCGCGTGTACGTGATCCTGCTCGGCCTGCTGGTGCTGTACA 416
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      AT--------TCTGGATAACTGCGTGGACCNCATTGACCGTTGCANACGGATACCGGGCC 402
                                                                                  

consensus_8219#0      ACGAGGTGCTAATTTATGTGTTGCAAAAGTTCAAGTGGTCAAATATTTATTGTAAAGAAG 476
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ATTGGNTGGGACANGCAACCTGGGTNCGGGACGTTTTCCGAATCAGCTACCCTGGCGGGC 462
                                                                                  

consensus_8219#0      CTGACTGTGTAAGGATTTTGCTTGTAGCGGATCCACAGATTCTGGGCAAAACGTTCGACA 536
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ACTTANTTTCCGTCCGAGGGCCAATAATTGGNCCCTGGGTGGGCGTGGGAGTTGTTTGAA 522
                                                                                  

consensus_8219#0      CGCACTTCTATGCCGGGTTGGCCAACTATGACTCGGACCGTTACCTGGCCTGGTACTACG 596
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      C------CGTTNCCAAGGACCTTNGCAACGCCTTAAACGACTGGGCGTGNCACTACCNAC 576
                                                                                  

consensus_8219#0      AGCAGGCGGTCGAGCATGTGCAGCCAGATGTGATCATCTTTCTTGGCGATCTGATGGACG 656
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      AAAACCCTTTGCAAAGCCCTGAAACGGTTTTGGANTTCCNTATATAATCCGGGAAACCCC 636
                                                                                  

consensus_8219#0      AGGGCACGGATTCGACCGAGATGCACTTCGAGGAGTACTACACACGCTTCGGAGCGATCT 716
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      NATTCCTTGGGCCAACCGGCTAGACTTCCCANNCNCCAAAGNCGCGTGCCTACAAGGCCG 696
                                                                                  

consensus_8219#0      TTCCCACTCATCCGACCGCAAGGTCGATCTACATACCGGGCGATAACGATATCGGCGGTG 776
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      TNCTGAGTTAAACAAAGCCCTGGCTGCTAAAAACACAGTGACCCTTGGACACANNTACTC 756
                                                                                  

consensus_8219#0      AGGGTCGGCAGCCGCTGAATCCGATTGCGAAGCGGCGGTTCCGTCAGTACTTCTCCGAGC 836
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      GTGGTCNCC--CCAAAGGGGCATACTTTNNTGNAGGTGNCCCGAGGGGGCACTTGTGATA 814
                                                                                  

consensus_8219#0      GTCCGGCATGGGTGATTAACGACAATCTCACGATTTACAACATCAATCGGATAACGCTGG 896
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ATACGTCCCCCCNAAAGTATGGTGAAGCGAAAA----CAGCNCCCGTGGGTTAACCCCNG 870
                                                                                  

consensus_8219#0      AAATGACGTTGAACG-ATCCGCGCATGGTGGACAGCACTGG--GTCGGACGTTTCCGATC 953
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      CAGTGTCNCTNTACCTAATCGCCCAAAAAAGGCGCGCTTTGTAGNCGTACCNTTTCGCCG 930
                                                                                  

consensus_8219#0      GCTACCTGCGGATATTCGTCAGCCATATGCCGGTGCTGGATGTGCCGTCCAGCTTCACCT 1013
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      CNCGATTCCNGGGGCGCGTANACCTTTNGTAANAGCGCTTATACTNGCCCACTTTCCACA 990
                                                                                  

consensus_8219#0      ACACGGCGATACACAACCTGAA--GCCGAACGTGATCTTTTCGGCCCATCTGCACGTGTC 1071
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ACAGGGGGNGCCAAAACTTATATAACCCGGCGCNGNCANCGTGGGAAAAANAGACCCCCC 1050
                                                                                  

consensus_8219#0      GCAGTTCGCGCGCATACACCGCAGCCGGCTGAAAACGGTCCAGTATAAGCCGCTGAGCCA 1131
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      CCTANGGACAACCCTTCGTNGTGGNTATAGACGAAACACCGATTCCCAAAAAGTTTACCA 1110
                                                                                  

consensus_8219#0      GGACAAGCGTACGGCGTACAAGGTGCATTCGTTCGATCTGAGCTACCATCAGGATACGCA 1191
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      CGGTGGGGTTATG-----TACGCCACTGNAGTACNACTAGGCCTTTNTGAGGGCCGCATC 1165
                                                                                  

consensus_8219#0      GGAGCTGCTGGAAATCATCGTCCCGACGTGC-TCGTACCGGATGAGTGTACCGGACATTG 1250
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      CCCCNCGGCGTAAAANACCACCCGGGNGGGCGNCACAAATTTNGTTTATAGAAGCTATTG 1225
                                                                                  

consensus_8219#0      GGTACGGTTATGCGGCCATTGATGGCACCACACTGAAGTACACCGTGCTGTGGACGACAC 1310
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      GGGCNTGANAACCACACCNGAGGGCGACGTAAGCCGCACAGATTNGCATGTAGTNGTTTG 1285
                                                                                  

consensus_8219#0      GGCGCTTCTATCAACTGATCTCGTACGTGGTGATGTTTGCCGTACCGTTTGGGCTGGGTG 1370
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      CAGACTATCATCAACCAGNCGCGGACGTGAAGGAANATANAACAGCGT------------ 1333
                                                                                  

consensus_8219#0      TGCTGTATCTTCTGGTCAAATTTGTACGCGAACACTGCACCTGTCGGCCACGGTATGAAC 1430
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ------------------------------------------------------------
                                                                                  

consensus_8219#0      GTTTGCCGAAGTAACACCCGGACCGGTAAGGTAGGCAGGTAGGTAGGCGGCTCGTGTACT 1490
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ------------------------------------------------------------
                                                                                  

consensus_8219#0      TGTGCAATTATGTGGCGAGGCAGTTAGCGAATAAATTATGAACGTGAAGCAATGTTTTTC 1550
consensus_8219#2      ------------------------------------------------------------
consensus_8219#1      ------------------------------------------------------------
                                                                                  

consensus_8219#0      TACAAACAGTAAAAAAAA 1568
consensus_8219#2      ------------------
consensus_8219#1      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)